AutoCloner

Multiple sequence alignment - TraesCS2A01G526300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G526300	chr2A	100.000	8118	0	0	1	8118	746689179	746681062	0.000000e+00	14992.0
1	TraesCS2A01G526300	chr2A	80.400	949	147	18	7195	8113	406976101	406975162	0.000000e+00	686.0
2	TraesCS2A01G526300	chr2A	80.084	949	150	17	7195	8113	407104856	407103917	0.000000e+00	669.0
3	TraesCS2A01G526300	chr2A	82.655	663	111	3	7460	8118	507718748	507718086	1.170000e-162	584.0
4	TraesCS2A01G526300	chr2A	88.162	321	27	7	6885	7200	746619280	746618966	9.950000e-99	372.0
5	TraesCS2A01G526300	chr2A	99.415	171	1	0	1803	1973	53617118	53617288	2.200000e-80	311.0
6	TraesCS2A01G526300	chr2A	98.000	50	1	0	6025	6074	656692390	656692439	4.040000e-13	87.9
7	TraesCS2A01G526300	chr2D	88.473	3071	167	77	4209	7108	616528234	616525180	0.000000e+00	3537.0
8	TraesCS2A01G526300	chr2D	92.178	1841	85	22	3	1807	616532485	616530668	0.000000e+00	2547.0
9	TraesCS2A01G526300	chr2D	86.420	810	59	28	1968	2748	616530669	616529882	0.000000e+00	839.0
10	TraesCS2A01G526300	chr2D	82.883	888	122	17	7242	8118	323541910	323542778	0.000000e+00	771.0
11	TraesCS2A01G526300	chr2D	82.286	700	105	12	7429	8117	588487548	588488239	9.080000e-164	588.0
12	TraesCS2A01G526300	chr2D	84.236	628	40	29	3486	4082	616528996	616528397	2.560000e-154	556.0
13	TraesCS2A01G526300	chr2D	92.857	98	7	0	7102	7199	616523037	616522940	8.490000e-30	143.0
14	TraesCS2A01G526300	chr2B	93.891	1817	83	14	4	1807	751325227	751323426	0.000000e+00	2715.0
15	TraesCS2A01G526300	chr2B	88.248	1421	128	18	6719	8118	751313619	751312217	0.000000e+00	1663.0
16	TraesCS2A01G526300	chr2B	86.001	1343	90	43	4278	5550	751321021	751319707	0.000000e+00	1349.0
17	TraesCS2A01G526300	chr2B	89.588	970	40	28	6160	7077	751318991	751318031	0.000000e+00	1175.0
18	TraesCS2A01G526300	chr2B	84.647	1218	104	36	1968	3142	751323427	751322250	0.000000e+00	1136.0
19	TraesCS2A01G526300	chr2B	91.667	564	22	13	5565	6109	751319657	751319100	0.000000e+00	758.0
20	TraesCS2A01G526300	chr2B	86.283	452	32	12	6672	7107	751287300	751286863	1.600000e-126	464.0
21	TraesCS2A01G526300	chr2B	80.914	613	50	36	3484	4073	751321975	751321407	9.740000e-114	422.0
22	TraesCS2A01G526300	chr2B	95.187	187	7	2	1798	1982	710833220	710833406	2.220000e-75	294.0
23	TraesCS2A01G526300	chr2B	90.099	101	10	0	7097	7197	751284740	751284640	1.840000e-26	132.0
24	TraesCS2A01G526300	chr5D	85.387	698	93	6	7429	8118	77868266	77867570	0.000000e+00	715.0
25	TraesCS2A01G526300	chr5D	93.878	49	2	1	6025	6073	431137484	431137437	1.130000e-08	73.1
26	TraesCS2A01G526300	chr5B	83.478	690	104	6	7438	8118	87303361	87302673	1.150000e-177	634.0
27	TraesCS2A01G526300	chr5B	79.060	234	39	10	7197	7423	366524903	366524673	1.410000e-32	152.0
28	TraesCS2A01G526300	chr5A	82.026	701	106	9	7429	8118	74531906	74531215	5.460000e-161	579.0
29	TraesCS2A01G526300	chr5A	96.685	181	5	1	1803	1982	659145357	659145537	4.760000e-77	300.0
30	TraesCS2A01G526300	chr7A	97.268	183	4	1	1799	1980	47626472	47626290	7.910000e-80	309.0
31	TraesCS2A01G526300	chr7A	91.803	61	4	1	6013	6073	510500370	510500429	5.220000e-12	84.2
32	TraesCS2A01G526300	chr7A	100.000	33	0	0	7242	7274	25858156	25858124	2.450000e-05	62.1
33	TraesCS2A01G526300	chr4B	97.222	180	5	0	1801	1980	23003407	23003228	1.020000e-78	305.0
34	TraesCS2A01G526300	chr1A	97.222	180	5	0	1798	1977	558549411	558549232	1.020000e-78	305.0
35	TraesCS2A01G526300	chr1A	98.000	50	1	0	6025	6074	535756399	535756350	4.040000e-13	87.9
36	TraesCS2A01G526300	chr1B	97.222	180	4	1	1797	1975	46873044	46872865	3.680000e-78	303.0
37	TraesCS2A01G526300	chr7B	96.175	183	5	1	1790	1972	730812151	730811971	1.710000e-76	298.0
38	TraesCS2A01G526300	chr6D	96.133	181	7	0	1800	1980	15354549	15354729	6.160000e-76	296.0
39	TraesCS2A01G526300	chr4A	79.365	189	24	12	7252	7436	690570430	690570253	1.430000e-22	119.0
40	TraesCS2A01G526300	chr1D	95.918	49	2	0	6025	6073	416281247	416281295	6.750000e-11	80.5

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G526300	chr2A	746681062	746689179	8117	True	14992.000000	14992	100.000000	1	8118	1	chr2A.!!$R5	8117
1	TraesCS2A01G526300	chr2A	406975162	406976101	939	True	686.000000	686	80.400000	7195	8113	1	chr2A.!!$R1	918
2	TraesCS2A01G526300	chr2A	407103917	407104856	939	True	669.000000	669	80.084000	7195	8113	1	chr2A.!!$R2	918
3	TraesCS2A01G526300	chr2A	507718086	507718748	662	True	584.000000	584	82.655000	7460	8118	1	chr2A.!!$R3	658
4	TraesCS2A01G526300	chr2D	616522940	616532485	9545	True	1524.400000	3537	88.832800	3	7199	5	chr2D.!!$R1	7196
5	TraesCS2A01G526300	chr2D	323541910	323542778	868	False	771.000000	771	82.883000	7242	8118	1	chr2D.!!$F1	876
6	TraesCS2A01G526300	chr2D	588487548	588488239	691	False	588.000000	588	82.286000	7429	8117	1	chr2D.!!$F2	688
7	TraesCS2A01G526300	chr2B	751312217	751313619	1402	True	1663.000000	1663	88.248000	6719	8118	1	chr2B.!!$R1	1399
8	TraesCS2A01G526300	chr2B	751318031	751325227	7196	True	1259.166667	2715	87.784667	4	7077	6	chr2B.!!$R3	7073
9	TraesCS2A01G526300	chr2B	751284640	751287300	2660	True	298.000000	464	88.191000	6672	7197	2	chr2B.!!$R2	525
10	TraesCS2A01G526300	chr5D	77867570	77868266	696	True	715.000000	715	85.387000	7429	8118	1	chr5D.!!$R1	689
11	TraesCS2A01G526300	chr5B	87302673	87303361	688	True	634.000000	634	83.478000	7438	8118	1	chr5B.!!$R1	680
12	TraesCS2A01G526300	chr5A	74531215	74531906	691	True	579.000000	579	82.026000	7429	8118	1	chr5A.!!$R1	689

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
654	664	0.462789	CTTGATGCCATGCCTTTCCC	59.537	55.0	0.0	0.00	3.97	F
1199	1225	0.110644	CGAGTTTTTCGCTGTGGAGC	60.111	55.0	0.0	43.22	4.70	F
2814	2924	0.112995	TCCTGCTCCCAATTTGCACT	59.887	50.0	0.0	32.91	4.40	F
3958	4383	0.030369	CGCCCGGTAGTAGTAGCAAG	59.970	60.0	0.0	0.00	4.01	F
4813	5490	0.099436	GTACCTAGTACCCACGCACG	59.901	60.0	0.0	33.38	5.34	F
6411	7299	0.104304	AGCAGGTACCTAAATCGGCG	59.896	55.0	15.8	0.00	6.46	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2228	2278	1.134371	GGGTAGAGCTCCATTGTGTCC	60.134	57.143	10.93	1.71	0.00	4.02	R
2914	3033	0.032678	ACTCACTGAACCACTGCTCG	59.967	55.000	0.00	0.00	0.00	5.03	R
4484	5133	0.110104	CCTGGATGGAATCTGGAGGC	59.890	60.000	0.00	0.00	44.71	4.70	R
5153	5892	0.106708	AGAAAGCGTGAACCAGCTGA	59.893	50.000	17.39	0.00	43.78	4.26	R
6502	7420	0.390866	CATGTTCTGCAGCGTCTCCT	60.391	55.000	9.47	0.00	0.00	3.69	R
7568	10752	0.249120	CTGTGCAATCAGGTACCCGA	59.751	55.000	8.74	3.72	0.00	5.14	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
79	80	1.279271	GCAGAGGAGGCAGGTTTCTTA	59.721	52.381	0.00	0.00	0.00	2.10
235	237	2.180946	TAGGGCCATCACTCATCACT	57.819	50.000	6.18	0.00	0.00	3.41
236	238	0.835941	AGGGCCATCACTCATCACTC	59.164	55.000	6.18	0.00	0.00	3.51
237	239	0.543277	GGGCCATCACTCATCACTCA	59.457	55.000	4.39	0.00	0.00	3.41
238	240	1.142465	GGGCCATCACTCATCACTCAT	59.858	52.381	4.39	0.00	0.00	2.90
239	241	2.492012	GGCCATCACTCATCACTCATC	58.508	52.381	0.00	0.00	0.00	2.92
240	242	2.158856	GGCCATCACTCATCACTCATCA	60.159	50.000	0.00	0.00	0.00	3.07
241	243	2.871022	GCCATCACTCATCACTCATCAC	59.129	50.000	0.00	0.00	0.00	3.06
242	244	3.680754	GCCATCACTCATCACTCATCACA	60.681	47.826	0.00	0.00	0.00	3.58
307	309	2.029110	CACCACACCACATCCAAAATCC	60.029	50.000	0.00	0.00	0.00	3.01
331	333	4.695455	CACCCTAACACATTGAGTTACTGG	59.305	45.833	12.42	12.42	0.00	4.00
334	336	5.411669	CCCTAACACATTGAGTTACTGGTTC	59.588	44.000	2.99	0.00	0.00	3.62
358	360	7.754625	TCAAGTTCAGTTTAGTGGTTAACAAC	58.245	34.615	4.85	4.85	0.00	3.32
360	362	7.933215	AGTTCAGTTTAGTGGTTAACAACTT	57.067	32.000	20.62	5.74	0.00	2.66
361	363	7.758495	AGTTCAGTTTAGTGGTTAACAACTTG	58.242	34.615	20.62	12.70	0.00	3.16
362	364	7.608761	AGTTCAGTTTAGTGGTTAACAACTTGA	59.391	33.333	20.62	14.70	0.00	3.02
440	450	5.533154	TGTGGGTAAAACAACCTATCACAAG	59.467	40.000	0.00	0.00	36.73	3.16
451	461	4.702196	ACCTATCACAAGTTTAGGGGGTA	58.298	43.478	3.89	0.00	37.42	3.69
480	490	1.004440	GGGTCTCTTCTGCGCTGTT	60.004	57.895	9.73	0.00	0.00	3.16
582	592	4.142609	AGTGACAATGAATCTGGCGTAT	57.857	40.909	0.00	0.00	0.00	3.06
583	593	4.122776	AGTGACAATGAATCTGGCGTATC	58.877	43.478	0.00	0.00	0.00	2.24
585	595	3.871006	TGACAATGAATCTGGCGTATCAC	59.129	43.478	0.00	0.00	0.00	3.06
594	604	2.159338	TCTGGCGTATCACTTAACCGTC	60.159	50.000	0.00	0.00	0.00	4.79
654	664	0.462789	CTTGATGCCATGCCTTTCCC	59.537	55.000	0.00	0.00	0.00	3.97
743	753	6.093495	GCAACCAAGTGTGTATATATGTGTGT	59.907	38.462	0.00	0.00	0.00	3.72
744	754	7.463544	CAACCAAGTGTGTATATATGTGTGTG	58.536	38.462	0.00	0.00	0.00	3.82
745	755	5.584649	ACCAAGTGTGTATATATGTGTGTGC	59.415	40.000	0.00	0.00	0.00	4.57
746	756	5.007626	CCAAGTGTGTATATATGTGTGTGCC	59.992	44.000	0.00	0.00	0.00	5.01
747	757	5.614324	AGTGTGTATATATGTGTGTGCCT	57.386	39.130	0.00	0.00	0.00	4.75
752	762	6.315144	TGTGTATATATGTGTGTGCCTGAAAC	59.685	38.462	0.00	0.00	0.00	2.78
819	829	4.263771	TGAAAGTTACCATCTTTCCCCTCC	60.264	45.833	13.39	0.00	45.64	4.30
979	993	2.877168	GTGCATCCTTAAGCATGAGAGG	59.123	50.000	10.71	0.00	43.44	3.69
1046	1060	1.767692	GCTCCCCCTTTCCAACAGA	59.232	57.895	0.00	0.00	0.00	3.41
1120	1134	1.455849	CCAACTTGGTGCCCTCTCA	59.544	57.895	0.00	0.00	31.35	3.27
1129	1143	4.847444	GCCCTCTCAAGCTCGGCC	62.847	72.222	0.00	0.00	33.30	6.13
1163	1181	2.677508	AGGAGTCTCCCTCTTGTGC	58.322	57.895	15.72	0.00	40.30	4.57
1165	1183	0.980423	GGAGTCTCCCTCTTGTGCTT	59.020	55.000	7.78	0.00	40.30	3.91
1199	1225	0.110644	CGAGTTTTTCGCTGTGGAGC	60.111	55.000	0.00	0.00	43.22	4.70
1200	1226	1.230324	GAGTTTTTCGCTGTGGAGCT	58.770	50.000	0.00	0.00	43.77	4.09
1201	1227	0.947244	AGTTTTTCGCTGTGGAGCTG	59.053	50.000	0.00	0.00	43.77	4.24
1202	1228	0.663153	GTTTTTCGCTGTGGAGCTGT	59.337	50.000	0.00	0.00	43.77	4.40
1233	1259	0.693049	AAGCCATCCTCCTTTGTCGT	59.307	50.000	0.00	0.00	0.00	4.34
1238	1264	1.202582	CATCCTCCTTTGTCGTCGACT	59.797	52.381	24.75	0.00	33.15	4.18
1282	1308	5.380043	TGAATTTCTCAGCCTTCTTTGTCT	58.620	37.500	0.00	0.00	0.00	3.41
1288	1314	3.206150	TCAGCCTTCTTTGTCTGTTGAC	58.794	45.455	0.00	0.00	43.20	3.18
1335	1368	8.697507	TGAGTATGCTTCTGATATAGTCAAGA	57.302	34.615	9.98	0.00	35.13	3.02
1352	1385	3.449018	TCAAGATCAAGCTCAGTCCTACC	59.551	47.826	0.00	0.00	0.00	3.18
1393	1426	7.663081	ACTGTGGGCTATGATTAATGATAAGTG	59.337	37.037	0.00	0.00	0.00	3.16
1441	1488	1.836802	AGGTCTCTGTCGGAGTTACC	58.163	55.000	8.56	9.58	42.40	2.85
1503	1550	7.285172	TGCAAATACATGGCTTGTGTATCTATT	59.715	33.333	15.57	4.10	40.80	1.73
1530	1577	4.955811	TCTTGCTGTAGTGGAAGAAAGA	57.044	40.909	0.00	0.00	40.51	2.52
1536	1583	4.997395	GCTGTAGTGGAAGAAAGACATGAA	59.003	41.667	0.00	0.00	0.00	2.57
1641	1688	8.958119	TCTGTTAGTCTTGTCTAATTTGTTGT	57.042	30.769	0.00	0.00	33.39	3.32
1740	1787	8.424918	CAATAACTCTGGAATAGCTCTCCTAAA	58.575	37.037	14.28	1.83	33.77	1.85
1807	1854	6.032880	GCTCGAACAATTGCTCAAATTTCTAC	59.967	38.462	5.05	0.00	36.28	2.59
1808	1855	7.202016	TCGAACAATTGCTCAAATTTCTACT	57.798	32.000	5.05	0.00	36.28	2.57
1809	1856	7.298122	TCGAACAATTGCTCAAATTTCTACTC	58.702	34.615	5.05	0.00	36.28	2.59
1810	1857	6.524586	CGAACAATTGCTCAAATTTCTACTCC	59.475	38.462	5.05	0.00	36.28	3.85
1811	1858	6.272822	ACAATTGCTCAAATTTCTACTCCC	57.727	37.500	5.05	0.00	36.28	4.30
1812	1859	6.012745	ACAATTGCTCAAATTTCTACTCCCT	58.987	36.000	5.05	0.00	36.28	4.20
1813	1860	6.151817	ACAATTGCTCAAATTTCTACTCCCTC	59.848	38.462	5.05	0.00	36.28	4.30
1814	1861	4.222124	TGCTCAAATTTCTACTCCCTCC	57.778	45.455	0.00	0.00	0.00	4.30
1815	1862	3.198872	GCTCAAATTTCTACTCCCTCCG	58.801	50.000	0.00	0.00	0.00	4.63
1816	1863	3.369576	GCTCAAATTTCTACTCCCTCCGT	60.370	47.826	0.00	0.00	0.00	4.69
1817	1864	4.833390	CTCAAATTTCTACTCCCTCCGTT	58.167	43.478	0.00	0.00	0.00	4.44
1818	1865	4.828829	TCAAATTTCTACTCCCTCCGTTC	58.171	43.478	0.00	0.00	0.00	3.95
1819	1866	3.908643	AATTTCTACTCCCTCCGTTCC	57.091	47.619	0.00	0.00	0.00	3.62
1820	1867	2.617840	TTTCTACTCCCTCCGTTCCT	57.382	50.000	0.00	0.00	0.00	3.36
1821	1868	3.744940	TTTCTACTCCCTCCGTTCCTA	57.255	47.619	0.00	0.00	0.00	2.94
1822	1869	3.744940	TTCTACTCCCTCCGTTCCTAA	57.255	47.619	0.00	0.00	0.00	2.69
1823	1870	3.744940	TCTACTCCCTCCGTTCCTAAA	57.255	47.619	0.00	0.00	0.00	1.85
1824	1871	4.261411	TCTACTCCCTCCGTTCCTAAAT	57.739	45.455	0.00	0.00	0.00	1.40
1825	1872	5.393068	TCTACTCCCTCCGTTCCTAAATA	57.607	43.478	0.00	0.00	0.00	1.40
1826	1873	5.136105	TCTACTCCCTCCGTTCCTAAATAC	58.864	45.833	0.00	0.00	0.00	1.89
1827	1874	3.991683	ACTCCCTCCGTTCCTAAATACT	58.008	45.455	0.00	0.00	0.00	2.12
1828	1875	4.359996	ACTCCCTCCGTTCCTAAATACTT	58.640	43.478	0.00	0.00	0.00	2.24
1829	1876	4.161754	ACTCCCTCCGTTCCTAAATACTTG	59.838	45.833	0.00	0.00	0.00	3.16
1830	1877	4.098894	TCCCTCCGTTCCTAAATACTTGT	58.901	43.478	0.00	0.00	0.00	3.16
1831	1878	4.161001	TCCCTCCGTTCCTAAATACTTGTC	59.839	45.833	0.00	0.00	0.00	3.18
1832	1879	4.161754	CCCTCCGTTCCTAAATACTTGTCT	59.838	45.833	0.00	0.00	0.00	3.41
1833	1880	5.338137	CCCTCCGTTCCTAAATACTTGTCTT	60.338	44.000	0.00	0.00	0.00	3.01
1834	1881	6.171213	CCTCCGTTCCTAAATACTTGTCTTT	58.829	40.000	0.00	0.00	0.00	2.52
1835	1882	6.313164	CCTCCGTTCCTAAATACTTGTCTTTC	59.687	42.308	0.00	0.00	0.00	2.62
1836	1883	7.001099	TCCGTTCCTAAATACTTGTCTTTCT	57.999	36.000	0.00	0.00	0.00	2.52
1837	1884	8.125978	TCCGTTCCTAAATACTTGTCTTTCTA	57.874	34.615	0.00	0.00	0.00	2.10
1838	1885	8.248945	TCCGTTCCTAAATACTTGTCTTTCTAG	58.751	37.037	0.00	0.00	0.00	2.43
1839	1886	7.491696	CCGTTCCTAAATACTTGTCTTTCTAGG	59.508	40.741	0.00	0.00	0.00	3.02
1840	1887	7.010275	CGTTCCTAAATACTTGTCTTTCTAGGC	59.990	40.741	0.00	0.00	0.00	3.93
1841	1888	7.490657	TCCTAAATACTTGTCTTTCTAGGCA	57.509	36.000	0.00	0.00	33.22	4.75
1842	1889	8.090788	TCCTAAATACTTGTCTTTCTAGGCAT	57.909	34.615	0.00	0.00	35.56	4.40
1843	1890	8.548877	TCCTAAATACTTGTCTTTCTAGGCATT	58.451	33.333	0.00	0.00	35.56	3.56
1844	1891	9.178758	CCTAAATACTTGTCTTTCTAGGCATTT	57.821	33.333	0.00	0.00	35.56	2.32
1846	1893	8.635765	AAATACTTGTCTTTCTAGGCATTTCA	57.364	30.769	0.00	0.00	35.56	2.69
1847	1894	8.635765	AATACTTGTCTTTCTAGGCATTTCAA	57.364	30.769	0.00	0.00	35.56	2.69
1848	1895	6.319141	ACTTGTCTTTCTAGGCATTTCAAC	57.681	37.500	0.00	0.00	35.56	3.18
1849	1896	5.827797	ACTTGTCTTTCTAGGCATTTCAACA	59.172	36.000	0.00	0.00	35.56	3.33
1850	1897	6.321181	ACTTGTCTTTCTAGGCATTTCAACAA	59.679	34.615	0.00	0.00	35.56	2.83
1851	1898	6.707440	TGTCTTTCTAGGCATTTCAACAAA	57.293	33.333	0.00	0.00	29.10	2.83
1852	1899	7.288810	TGTCTTTCTAGGCATTTCAACAAAT	57.711	32.000	0.00	0.00	29.10	2.32
1865	1912	7.915293	ATTTCAACAAATGACTACATACGGA	57.085	32.000	0.00	0.00	37.92	4.69
1866	1913	6.961359	TTCAACAAATGACTACATACGGAG	57.039	37.500	0.00	0.00	37.92	4.63
1867	1914	4.868171	TCAACAAATGACTACATACGGAGC	59.132	41.667	0.00	0.00	35.50	4.70
1868	1915	4.465632	ACAAATGACTACATACGGAGCA	57.534	40.909	0.00	0.00	35.50	4.26
1869	1916	4.827692	ACAAATGACTACATACGGAGCAA	58.172	39.130	0.00	0.00	35.50	3.91
1870	1917	5.242434	ACAAATGACTACATACGGAGCAAA	58.758	37.500	0.00	0.00	35.50	3.68
1871	1918	5.703592	ACAAATGACTACATACGGAGCAAAA	59.296	36.000	0.00	0.00	35.50	2.44
1872	1919	6.374333	ACAAATGACTACATACGGAGCAAAAT	59.626	34.615	0.00	0.00	35.50	1.82
1873	1920	5.991328	ATGACTACATACGGAGCAAAATG	57.009	39.130	0.00	0.00	34.71	2.32
1874	1921	5.079689	TGACTACATACGGAGCAAAATGA	57.920	39.130	0.00	0.00	0.00	2.57
1875	1922	5.109210	TGACTACATACGGAGCAAAATGAG	58.891	41.667	0.00	0.00	0.00	2.90
1876	1923	5.086104	ACTACATACGGAGCAAAATGAGT	57.914	39.130	0.00	0.00	0.00	3.41
1877	1924	4.870426	ACTACATACGGAGCAAAATGAGTG	59.130	41.667	0.00	0.00	0.00	3.51
1878	1925	3.937814	ACATACGGAGCAAAATGAGTGA	58.062	40.909	0.00	0.00	0.00	3.41
1879	1926	4.323417	ACATACGGAGCAAAATGAGTGAA	58.677	39.130	0.00	0.00	0.00	3.18
1880	1927	4.943705	ACATACGGAGCAAAATGAGTGAAT	59.056	37.500	0.00	0.00	0.00	2.57
1881	1928	5.065218	ACATACGGAGCAAAATGAGTGAATC	59.935	40.000	0.00	0.00	0.00	2.52
1882	1929	3.679389	ACGGAGCAAAATGAGTGAATCT	58.321	40.909	0.00	0.00	0.00	2.40
1883	1930	4.832248	ACGGAGCAAAATGAGTGAATCTA	58.168	39.130	0.00	0.00	0.00	1.98
1884	1931	4.631813	ACGGAGCAAAATGAGTGAATCTAC	59.368	41.667	0.00	0.00	0.00	2.59
1885	1932	4.631377	CGGAGCAAAATGAGTGAATCTACA	59.369	41.667	0.00	0.00	0.00	2.74
1886	1933	5.446473	CGGAGCAAAATGAGTGAATCTACAC	60.446	44.000	0.00	0.00	40.60	2.90
1929	1976	7.342769	ACATCCGTATGTAGTAGTCATTTGA	57.657	36.000	0.00	0.00	44.66	2.69
1930	1977	7.778083	ACATCCGTATGTAGTAGTCATTTGAA	58.222	34.615	0.00	0.00	44.66	2.69
1931	1978	8.255206	ACATCCGTATGTAGTAGTCATTTGAAA	58.745	33.333	0.00	0.00	44.66	2.69
1932	1979	9.261180	CATCCGTATGTAGTAGTCATTTGAAAT	57.739	33.333	0.00	0.00	0.00	2.17
1933	1980	8.642908	TCCGTATGTAGTAGTCATTTGAAATG	57.357	34.615	11.54	11.54	0.00	2.32
1934	1981	8.255206	TCCGTATGTAGTAGTCATTTGAAATGT	58.745	33.333	16.62	2.38	0.00	2.71
1935	1982	8.540492	CCGTATGTAGTAGTCATTTGAAATGTC	58.460	37.037	16.62	11.74	0.00	3.06
1936	1983	9.302345	CGTATGTAGTAGTCATTTGAAATGTCT	57.698	33.333	18.62	18.62	0.00	3.41
1960	2007	8.248945	TCTAGAAAGACAAGTATTTAGGAACGG	58.751	37.037	0.00	0.00	0.00	4.44
1961	2008	7.001099	AGAAAGACAAGTATTTAGGAACGGA	57.999	36.000	0.00	0.00	0.00	4.69
1962	2009	7.097834	AGAAAGACAAGTATTTAGGAACGGAG	58.902	38.462	0.00	0.00	0.00	4.63
1963	2010	5.340439	AGACAAGTATTTAGGAACGGAGG	57.660	43.478	0.00	0.00	0.00	4.30
1964	2011	4.161754	AGACAAGTATTTAGGAACGGAGGG	59.838	45.833	0.00	0.00	0.00	4.30
1965	2012	4.098894	ACAAGTATTTAGGAACGGAGGGA	58.901	43.478	0.00	0.00	0.00	4.20
1966	2013	4.161754	ACAAGTATTTAGGAACGGAGGGAG	59.838	45.833	0.00	0.00	0.00	4.30
1967	2014	3.991683	AGTATTTAGGAACGGAGGGAGT	58.008	45.455	0.00	0.00	0.00	3.85
1968	2015	5.134725	AGTATTTAGGAACGGAGGGAGTA	57.865	43.478	0.00	0.00	0.00	2.59
1989	2036	8.606830	GGAGTATATGTTATCTCCCAAAGGAAT	58.393	37.037	0.00	0.00	43.40	3.01
2078	2125	6.761714	ACCTTAGAGACCGCATAATAACTTTG	59.238	38.462	0.00	0.00	0.00	2.77
2080	2127	7.042658	CCTTAGAGACCGCATAATAACTTTGAC	60.043	40.741	0.00	0.00	0.00	3.18
2141	2188	7.538678	CCTTTCTGGTAAATGAATTCTTGTTCG	59.461	37.037	7.05	0.00	0.00	3.95
2182	2232	6.294473	AGGTGATCAATTCAGGTGTATCATC	58.706	40.000	0.00	0.00	34.17	2.92
2183	2233	6.100859	AGGTGATCAATTCAGGTGTATCATCT	59.899	38.462	0.00	0.00	34.17	2.90
2184	2234	7.290948	AGGTGATCAATTCAGGTGTATCATCTA	59.709	37.037	0.00	0.00	34.03	1.98
2185	2235	7.601886	GGTGATCAATTCAGGTGTATCATCTAG	59.398	40.741	0.00	0.00	34.17	2.43
2224	2274	6.959606	AACCAGGTAGCATGATATAAGGAT	57.040	37.500	11.07	0.00	0.00	3.24
2225	2275	6.959606	ACCAGGTAGCATGATATAAGGATT	57.040	37.500	11.07	0.00	0.00	3.01
2226	2276	6.715280	ACCAGGTAGCATGATATAAGGATTG	58.285	40.000	11.07	0.00	0.00	2.67
2227	2277	6.501805	ACCAGGTAGCATGATATAAGGATTGA	59.498	38.462	11.07	0.00	0.00	2.57
2228	2278	7.046652	CCAGGTAGCATGATATAAGGATTGAG	58.953	42.308	0.00	0.00	0.00	3.02
2229	2279	7.046652	CAGGTAGCATGATATAAGGATTGAGG	58.953	42.308	0.00	0.00	0.00	3.86
2230	2280	6.962311	AGGTAGCATGATATAAGGATTGAGGA	59.038	38.462	0.00	0.00	0.00	3.71
2291	2341	1.826385	ACATCCACAAGCTTAGGTGC	58.174	50.000	14.73	0.00	33.72	5.01
2303	2353	5.793030	AGCTTAGGTGCGTATCTATTTCT	57.207	39.130	0.00	0.00	38.13	2.52
2306	2356	6.041069	AGCTTAGGTGCGTATCTATTTCTCTT	59.959	38.462	0.00	0.00	38.13	2.85
2312	2362	5.343593	GTGCGTATCTATTTCTCTTGATCCG	59.656	44.000	0.00	0.00	0.00	4.18
2319	2369	5.894393	TCTATTTCTCTTGATCCGTTCCTCT	59.106	40.000	0.00	0.00	0.00	3.69
2321	2371	5.995565	TTTCTCTTGATCCGTTCCTCTTA	57.004	39.130	0.00	0.00	0.00	2.10
2322	2372	5.995565	TTCTCTTGATCCGTTCCTCTTAA	57.004	39.130	0.00	0.00	0.00	1.85
2339	2393	7.974504	TCCTCTTAATTCTCCTACACAGTTTT	58.025	34.615	0.00	0.00	0.00	2.43
2354	2416	5.474876	ACACAGTTTTTCCATCTGATTCTCC	59.525	40.000	0.00	0.00	33.93	3.71
2356	2418	5.942826	ACAGTTTTTCCATCTGATTCTCCTC	59.057	40.000	0.00	0.00	33.93	3.71
2368	2430	6.346896	TCTGATTCTCCTCTGTGAATTCATG	58.653	40.000	12.12	8.14	35.44	3.07
2415	2477	7.038659	GCATTAATAGTCTGTCTGAACTCTGT	58.961	38.462	0.00	0.00	0.00	3.41
2428	2491	9.607988	TGTCTGAACTCTGTAATAGAAAAACAA	57.392	29.630	0.00	0.00	34.32	2.83
2528	2591	8.407832	TGCATTAGATTTGATACTTGTTGATGG	58.592	33.333	0.00	0.00	0.00	3.51
2543	2606	4.281435	TGTTGATGGTGATGCAAACTGATT	59.719	37.500	0.00	0.00	0.00	2.57
2544	2607	4.443913	TGATGGTGATGCAAACTGATTG	57.556	40.909	0.00	0.00	42.21	2.67
2546	2609	4.707934	TGATGGTGATGCAAACTGATTGAT	59.292	37.500	1.49	0.00	41.85	2.57
2585	2648	0.749454	CAAGTGGGCTAGTGCATCCC	60.749	60.000	8.75	8.75	41.91	3.85
2650	2722	4.019321	AGCAAAATCCTAGACTAAGCACCA	60.019	41.667	0.00	0.00	0.00	4.17
2660	2732	3.118956	AGACTAAGCACCATCGAAAGGAG	60.119	47.826	13.58	7.23	0.00	3.69
2674	2750	5.865085	TCGAAAGGAGAAAAGAAGGAATCA	58.135	37.500	0.00	0.00	0.00	2.57
2708	2785	2.032550	CGAAATGGTGCATCAAGCTAGG	59.967	50.000	2.42	0.00	45.94	3.02
2715	2792	3.071602	GGTGCATCAAGCTAGGGAGATAA	59.928	47.826	0.00	0.00	45.94	1.75
2756	2833	8.630917	TCTCTGAAAGTATAATACTACTGTGGC	58.369	37.037	0.00	0.00	38.26	5.01
2778	2888	0.614812	TAACAGCCGTAGAAACCCCC	59.385	55.000	0.00	0.00	0.00	5.40
2784	2894	2.271173	GTAGAAACCCCCTGCCGG	59.729	66.667	0.00	0.00	0.00	6.13
2785	2895	2.123180	TAGAAACCCCCTGCCGGA	59.877	61.111	5.05	0.00	0.00	5.14
2786	2896	1.539372	TAGAAACCCCCTGCCGGAA	60.539	57.895	5.05	0.00	0.00	4.30
2787	2897	1.135068	TAGAAACCCCCTGCCGGAAA	61.135	55.000	5.05	0.00	0.00	3.13
2788	2898	1.532078	GAAACCCCCTGCCGGAAAA	60.532	57.895	5.05	0.00	0.00	2.29
2789	2899	1.075151	AAACCCCCTGCCGGAAAAA	60.075	52.632	5.05	0.00	0.00	1.94
2790	2900	1.118965	AAACCCCCTGCCGGAAAAAG	61.119	55.000	5.05	0.00	0.00	2.27
2791	2901	2.679996	CCCCCTGCCGGAAAAAGG	60.680	66.667	5.05	5.72	0.00	3.11
2792	2902	2.117423	CCCCTGCCGGAAAAAGGT	59.883	61.111	5.05	0.00	0.00	3.50
2793	2903	1.533033	CCCCTGCCGGAAAAAGGTT	60.533	57.895	5.05	0.00	0.00	3.50
2794	2904	1.118965	CCCCTGCCGGAAAAAGGTTT	61.119	55.000	5.05	0.00	0.00	3.27
2795	2905	0.756294	CCCTGCCGGAAAAAGGTTTT	59.244	50.000	5.05	0.00	0.00	2.43
2796	2906	1.270094	CCCTGCCGGAAAAAGGTTTTC	60.270	52.381	5.05	5.13	0.00	2.29
2797	2907	1.270094	CCTGCCGGAAAAAGGTTTTCC	60.270	52.381	18.52	18.52	43.38	3.13
2810	2920	3.044235	GGTTTTCCTGCTCCCAATTTG	57.956	47.619	0.00	0.00	36.94	2.32
2811	2921	2.416747	GTTTTCCTGCTCCCAATTTGC	58.583	47.619	0.00	0.00	0.00	3.68
2812	2922	1.714541	TTTCCTGCTCCCAATTTGCA	58.285	45.000	0.00	0.00	35.30	4.08
2813	2923	0.968405	TTCCTGCTCCCAATTTGCAC	59.032	50.000	0.00	0.00	32.91	4.57
2814	2924	0.112995	TCCTGCTCCCAATTTGCACT	59.887	50.000	0.00	0.00	32.91	4.40
2815	2925	0.971386	CCTGCTCCCAATTTGCACTT	59.029	50.000	0.00	0.00	32.91	3.16
2816	2926	1.345415	CCTGCTCCCAATTTGCACTTT	59.655	47.619	0.00	0.00	32.91	2.66
2817	2927	2.409975	CTGCTCCCAATTTGCACTTTG	58.590	47.619	0.00	0.00	32.91	2.77
2818	2928	1.150827	GCTCCCAATTTGCACTTTGC	58.849	50.000	0.00	0.00	45.29	3.68
2853	2963	3.361977	CCGTTTTCCGCACAGGGG	61.362	66.667	0.00	0.00	41.52	4.79
2894	3013	2.763448	GAGTCCTGTTAGAGCCATGAGT	59.237	50.000	0.00	0.00	0.00	3.41
2906	3025	1.108776	CCATGAGTTTGGCATCAGGG	58.891	55.000	5.94	5.94	40.59	4.45
2911	3030	1.203287	GAGTTTGGCATCAGGGAAAGC	59.797	52.381	0.00	0.00	0.00	3.51
2912	3031	0.968405	GTTTGGCATCAGGGAAAGCA	59.032	50.000	0.00	0.00	0.00	3.91
2914	3033	1.252904	TTGGCATCAGGGAAAGCAGC	61.253	55.000	0.00	0.00	0.00	5.25
2930	3049	1.301244	AGCGAGCAGTGGTTCAGTG	60.301	57.895	0.00	0.00	37.80	3.66
2935	3054	1.069204	GAGCAGTGGTTCAGTGAGTGA	59.931	52.381	6.89	0.00	36.99	3.41
2936	3055	1.069823	AGCAGTGGTTCAGTGAGTGAG	59.930	52.381	6.89	0.00	36.99	3.51
2939	3058	2.111384	AGTGGTTCAGTGAGTGAGTGT	58.889	47.619	0.00	0.00	36.21	3.55
2940	3059	2.159043	AGTGGTTCAGTGAGTGAGTGTG	60.159	50.000	0.00	0.00	36.21	3.82
2941	3060	1.831106	TGGTTCAGTGAGTGAGTGTGT	59.169	47.619	0.00	0.00	36.21	3.72
2944	3063	4.051922	GGTTCAGTGAGTGAGTGTGTTAG	58.948	47.826	0.00	0.00	36.21	2.34
2956	3078	2.426738	AGTGTGTTAGCAAAGCAAAGCA	59.573	40.909	0.00	0.00	0.00	3.91
3002	3124	1.478654	GGTTGTGAGGAGCCCTGAAAA	60.479	52.381	0.00	0.00	31.76	2.29
3003	3125	2.306847	GTTGTGAGGAGCCCTGAAAAA	58.693	47.619	0.00	0.00	31.76	1.94
3004	3126	2.276732	TGTGAGGAGCCCTGAAAAAG	57.723	50.000	0.00	0.00	31.76	2.27
3007	3129	3.222603	GTGAGGAGCCCTGAAAAAGAAA	58.777	45.455	0.00	0.00	31.76	2.52
3009	3131	3.891366	TGAGGAGCCCTGAAAAAGAAAAG	59.109	43.478	0.00	0.00	31.76	2.27
3127	3262	1.068921	GAGGCGAGATGCTCCCTTC	59.931	63.158	0.00	0.00	45.43	3.46
3136	3271	1.742268	GATGCTCCCTTCTGCTTTGTC	59.258	52.381	0.00	0.00	0.00	3.18
3142	3277	0.674895	CCTTCTGCTTTGTCCCTCCG	60.675	60.000	0.00	0.00	0.00	4.63
3143	3278	1.301677	CTTCTGCTTTGTCCCTCCGC	61.302	60.000	0.00	0.00	0.00	5.54
3145	3280	3.249189	TGCTTTGTCCCTCCGCCT	61.249	61.111	0.00	0.00	0.00	5.52
3146	3281	1.899437	CTGCTTTGTCCCTCCGCCTA	61.899	60.000	0.00	0.00	0.00	3.93
3147	3282	1.298667	GCTTTGTCCCTCCGCCTAA	59.701	57.895	0.00	0.00	0.00	2.69
3148	3283	0.107165	GCTTTGTCCCTCCGCCTAAT	60.107	55.000	0.00	0.00	0.00	1.73
3149	3284	1.140252	GCTTTGTCCCTCCGCCTAATA	59.860	52.381	0.00	0.00	0.00	0.98
3151	3286	0.756903	TTGTCCCTCCGCCTAATAGC	59.243	55.000	0.00	0.00	0.00	2.97
3174	3324	0.457853	CGTAGAAACGCAGGCTAGCA	60.458	55.000	18.24	0.00	43.12	3.49
3187	3337	1.819229	CTAGCATGCCGGACAGAGT	59.181	57.895	15.66	0.00	0.00	3.24
3191	3341	0.598065	GCATGCCGGACAGAGTTTTT	59.402	50.000	5.05	0.00	0.00	1.94
3192	3342	1.666888	GCATGCCGGACAGAGTTTTTG	60.667	52.381	5.05	0.00	0.00	2.44
3195	3400	1.305201	GCCGGACAGAGTTTTTGTCA	58.695	50.000	5.05	0.00	45.23	3.58
3201	3406	3.694566	GGACAGAGTTTTTGTCAACAGGT	59.305	43.478	7.57	0.00	45.23	4.00
3221	3426	4.789075	CGTCGTCGGCCGGTGATT	62.789	66.667	27.83	0.00	37.11	2.57
3228	3433	3.443045	GGCCGGTGATTGGTGCTG	61.443	66.667	1.90	0.00	0.00	4.41
3241	3446	2.437180	TGCTGGCCTGAATCTGCG	60.437	61.111	14.77	0.00	0.00	5.18
3252	3457	0.378610	GAATCTGCGCTTAAGGCCAC	59.621	55.000	9.73	0.00	37.74	5.01
3257	3462	0.391130	TGCGCTTAAGGCCACAGTAG	60.391	55.000	9.73	0.00	37.74	2.57
3267	3475	2.176889	GGCCACAGTAGGTTAGTCTGA	58.823	52.381	0.00	0.00	33.93	3.27
3279	3487	8.308207	AGTAGGTTAGTCTGAAACTCTGAATTC	58.692	37.037	0.00	0.00	39.55	2.17
3290	3498	4.489679	ACTCTGAATTCGTGCTTTTTCC	57.510	40.909	0.04	0.00	0.00	3.13
3291	3499	4.137543	ACTCTGAATTCGTGCTTTTTCCT	58.862	39.130	0.04	0.00	0.00	3.36
3292	3500	4.214332	ACTCTGAATTCGTGCTTTTTCCTC	59.786	41.667	0.04	0.00	0.00	3.71
3306	3521	2.949451	TTCCTCAAGAGTGATCGCTC	57.051	50.000	25.67	25.67	31.85	5.03
3308	3523	0.248825	CCTCAAGAGTGATCGCTCGG	60.249	60.000	26.31	22.35	40.26	4.63
3312	3527	0.603569	AAGAGTGATCGCTCGGTGTT	59.396	50.000	26.31	14.86	40.26	3.32
3314	3529	0.388649	GAGTGATCGCTCGGTGTTGT	60.389	55.000	19.90	0.00	0.00	3.32
3329	3544	3.495100	GGTGTTGTCTTGTGAGGAGTGAT	60.495	47.826	0.00	0.00	0.00	3.06
3337	3552	1.139654	TGTGAGGAGTGATAGCCATGC	59.860	52.381	0.00	0.00	0.00	4.06
3339	3554	0.390860	GAGGAGTGATAGCCATGCGT	59.609	55.000	0.00	0.00	0.00	5.24
3350	3565	2.028733	CCATGCGTTTGGCTTTGGC	61.029	57.895	0.00	0.00	44.05	4.52
3351	3566	1.300775	CATGCGTTTGGCTTTGGCA	60.301	52.632	0.00	0.00	44.05	4.92
3352	3567	0.671163	CATGCGTTTGGCTTTGGCAT	60.671	50.000	0.00	1.82	44.51	4.40
3353	3568	0.390209	ATGCGTTTGGCTTTGGCATC	60.390	50.000	0.00	0.00	40.01	3.91
3354	3569	2.088178	GCGTTTGGCTTTGGCATCG	61.088	57.895	11.95	11.95	38.08	3.84
3355	3570	1.444212	CGTTTGGCTTTGGCATCGG	60.444	57.895	0.00	0.00	38.08	4.18
3366	3581	2.107953	GCATCGGGTCTCTCTGGC	59.892	66.667	0.00	0.00	0.00	4.85
3367	3582	2.818132	CATCGGGTCTCTCTGGCC	59.182	66.667	0.00	0.00	40.45	5.36
3374	3589	1.610673	GTCTCTCTGGCCTGGTGGA	60.611	63.158	10.07	5.43	34.57	4.02
3387	3602	2.299582	CCTGGTGGAGATGCTCATAGAG	59.700	54.545	0.00	0.00	34.57	2.43
3397	3612	8.429320	GGAGATGCTCATAGAGAGTTGACTCG	62.429	50.000	5.56	0.00	46.47	4.18
3428	3666	3.480133	GAGGCCGGCCATGGTAGT	61.480	66.667	45.13	25.09	38.92	2.73
3429	3667	3.757248	GAGGCCGGCCATGGTAGTG	62.757	68.421	45.13	0.88	38.92	2.74
3430	3668	4.109675	GGCCGGCCATGGTAGTGT	62.110	66.667	40.73	0.00	35.81	3.55
3431	3669	2.513897	GCCGGCCATGGTAGTGTC	60.514	66.667	18.11	0.00	0.00	3.67
3432	3670	2.202878	CCGGCCATGGTAGTGTCG	60.203	66.667	14.67	7.99	0.00	4.35
3433	3671	2.890474	CGGCCATGGTAGTGTCGC	60.890	66.667	14.67	0.00	0.00	5.19
3435	3673	1.815421	GGCCATGGTAGTGTCGCTG	60.815	63.158	14.67	0.00	0.00	5.18
3436	3674	1.218047	GCCATGGTAGTGTCGCTGA	59.782	57.895	14.67	0.00	0.00	4.26
3438	3676	1.743772	GCCATGGTAGTGTCGCTGAAT	60.744	52.381	14.67	0.00	0.00	2.57
3442	3680	4.082787	CCATGGTAGTGTCGCTGAATTTTT	60.083	41.667	2.57	0.00	0.00	1.94
3473	3711	3.636231	CGGGGTGCACTGGGAGAA	61.636	66.667	17.98	0.00	0.00	2.87
3476	3714	1.566298	GGGGTGCACTGGGAGAAGAT	61.566	60.000	17.98	0.00	0.00	2.40
3477	3715	0.393537	GGGTGCACTGGGAGAAGATG	60.394	60.000	17.98	0.00	0.00	2.90
3478	3716	0.615331	GGTGCACTGGGAGAAGATGA	59.385	55.000	17.98	0.00	0.00	2.92
3480	3718	0.907486	TGCACTGGGAGAAGATGAGG	59.093	55.000	0.00	0.00	0.00	3.86
3481	3719	1.198713	GCACTGGGAGAAGATGAGGA	58.801	55.000	0.00	0.00	0.00	3.71
3482	3720	1.138661	GCACTGGGAGAAGATGAGGAG	59.861	57.143	0.00	0.00	0.00	3.69
3525	3892	2.316867	TGTGAGTGCGTCGCCATTG	61.317	57.895	15.88	0.00	34.45	2.82
3565	3940	1.076024	ACTGACCACCCAATCAGCAAT	59.924	47.619	1.21	0.00	45.23	3.56
3567	3942	1.355381	TGACCACCCAATCAGCAATCT	59.645	47.619	0.00	0.00	0.00	2.40
3568	3943	2.225091	TGACCACCCAATCAGCAATCTT	60.225	45.455	0.00	0.00	0.00	2.40
3569	3944	2.424956	GACCACCCAATCAGCAATCTTC	59.575	50.000	0.00	0.00	0.00	2.87
3570	3945	1.753073	CCACCCAATCAGCAATCTTCC	59.247	52.381	0.00	0.00	0.00	3.46
3572	3947	1.642762	ACCCAATCAGCAATCTTCCCT	59.357	47.619	0.00	0.00	0.00	4.20
3573	3948	2.043526	ACCCAATCAGCAATCTTCCCTT	59.956	45.455	0.00	0.00	0.00	3.95
3575	3950	2.429610	CCAATCAGCAATCTTCCCTTGG	59.570	50.000	0.00	0.00	0.00	3.61
3576	3951	3.094572	CAATCAGCAATCTTCCCTTGGT	58.905	45.455	0.00	0.00	34.84	3.67
3577	3952	2.496899	TCAGCAATCTTCCCTTGGTC	57.503	50.000	0.00	0.00	32.34	4.02
3578	3953	1.988107	TCAGCAATCTTCCCTTGGTCT	59.012	47.619	0.00	0.00	32.34	3.85
3600	3975	2.372040	CTTCCCGGGACACGTGTTGA	62.372	60.000	26.87	11.59	42.24	3.18
3618	3993	7.119116	ACGTGTTGAGTTTTTAGCATCATATGA	59.881	33.333	8.10	8.10	0.00	2.15
3645	4020	0.322008	AACCTAGGCTGCAAGTGAGC	60.322	55.000	9.30	0.00	35.30	4.26
3681	4056	0.321653	GGTGAACCTGGACGCAAGAT	60.322	55.000	0.00	0.00	43.62	2.40
3694	4069	4.143333	AAGATCGGCCGGGTGTCG	62.143	66.667	27.83	0.00	38.88	4.35
3696	4071	4.446413	GATCGGCCGGGTGTCGTT	62.446	66.667	27.83	0.00	37.11	3.85
3751	4139	3.866651	CCGGGCATGGAAATAGATAGAG	58.133	50.000	0.00	0.00	0.00	2.43
3753	4141	4.499183	CGGGCATGGAAATAGATAGAGAC	58.501	47.826	0.00	0.00	0.00	3.36
3754	4142	4.621747	CGGGCATGGAAATAGATAGAGACC	60.622	50.000	0.00	0.00	0.00	3.85
3755	4143	4.323868	GGGCATGGAAATAGATAGAGACCC	60.324	50.000	0.00	0.00	0.00	4.46
3766	4170	0.892358	TAGAGACCCTTGCGTCGTGT	60.892	55.000	0.00	0.00	37.85	4.49
3900	4318	4.494091	TGTTGATTGATTCCTCCTCCTC	57.506	45.455	0.00	0.00	0.00	3.71
3914	4332	4.402474	CCTCCTCCTCTCTCTTTCTTTCTC	59.598	50.000	0.00	0.00	0.00	2.87
3931	4356	1.000955	TCTCTTCTTTCTCCCGTGTGC	59.999	52.381	0.00	0.00	0.00	4.57
3957	4382	1.386525	CCGCCCGGTAGTAGTAGCAA	61.387	60.000	0.00	0.00	0.00	3.91
3958	4383	0.030369	CGCCCGGTAGTAGTAGCAAG	59.970	60.000	0.00	0.00	0.00	4.01
3959	4384	1.109609	GCCCGGTAGTAGTAGCAAGT	58.890	55.000	0.00	0.00	0.00	3.16
3960	4385	2.301346	GCCCGGTAGTAGTAGCAAGTA	58.699	52.381	0.00	0.00	0.00	2.24
3961	4386	2.292845	GCCCGGTAGTAGTAGCAAGTAG	59.707	54.545	0.00	0.00	0.00	2.57
3962	4387	2.292845	CCCGGTAGTAGTAGCAAGTAGC	59.707	54.545	0.00	0.00	46.19	3.58
3972	4397	3.761481	GCAAGTAGCAACAGCAGTG	57.239	52.632	0.00	0.00	44.79	3.66
4082	4507	2.051804	GAATCATGGCGGCCTTGACG	62.052	60.000	32.24	11.26	39.83	4.35
4089	4514	3.398920	CGGCCTTGACGCTACATG	58.601	61.111	0.00	0.00	0.00	3.21
4090	4515	2.173669	CGGCCTTGACGCTACATGG	61.174	63.158	0.00	0.00	37.89	3.66
4091	4516	1.819632	GGCCTTGACGCTACATGGG	60.820	63.158	0.00	0.00	36.17	4.00
4092	4517	2.472909	GCCTTGACGCTACATGGGC	61.473	63.158	0.00	0.00	36.17	5.36
4093	4518	1.221840	CCTTGACGCTACATGGGCT	59.778	57.895	10.38	0.00	33.34	5.19
4095	4520	1.148157	CTTGACGCTACATGGGCTCG	61.148	60.000	10.38	4.78	0.00	5.03
4096	4521	2.279517	GACGCTACATGGGCTCGG	60.280	66.667	10.38	0.00	0.00	4.63
4097	4522	2.758327	ACGCTACATGGGCTCGGA	60.758	61.111	10.38	0.00	0.00	4.55
4098	4523	2.088674	GACGCTACATGGGCTCGGAT	62.089	60.000	10.38	0.00	0.00	4.18
4099	4524	1.069765	CGCTACATGGGCTCGGATT	59.930	57.895	10.38	0.00	0.00	3.01
4101	4526	0.947244	GCTACATGGGCTCGGATTTG	59.053	55.000	0.00	0.00	0.00	2.32
4103	4528	2.213499	CTACATGGGCTCGGATTTGAC	58.787	52.381	0.00	0.00	0.00	3.18
4104	4529	0.744414	ACATGGGCTCGGATTTGACG	60.744	55.000	0.00	0.00	0.00	4.35
4105	4530	0.744414	CATGGGCTCGGATTTGACGT	60.744	55.000	0.00	0.00	0.00	4.34
4106	4531	0.744414	ATGGGCTCGGATTTGACGTG	60.744	55.000	0.00	0.00	0.00	4.49
4107	4532	1.079405	GGGCTCGGATTTGACGTGA	60.079	57.895	0.00	0.00	0.00	4.35
4108	4533	0.462047	GGGCTCGGATTTGACGTGAT	60.462	55.000	0.00	0.00	0.00	3.06
4109	4534	1.202486	GGGCTCGGATTTGACGTGATA	60.202	52.381	0.00	0.00	0.00	2.15
4110	4535	2.546778	GGCTCGGATTTGACGTGATAA	58.453	47.619	0.00	0.00	0.00	1.75
4111	4536	2.284417	GGCTCGGATTTGACGTGATAAC	59.716	50.000	0.00	0.00	0.00	1.89
4112	4537	2.927477	GCTCGGATTTGACGTGATAACA	59.073	45.455	0.00	0.00	0.00	2.41
4113	4538	3.241995	GCTCGGATTTGACGTGATAACAC	60.242	47.826	0.00	0.00	42.88	3.32
4121	4546	2.782615	GTGATAACACGGGCACGC	59.217	61.111	9.12	0.00	46.04	5.34
4122	4547	2.030401	GTGATAACACGGGCACGCA	61.030	57.895	9.12	0.00	46.04	5.24
4123	4548	2.030401	TGATAACACGGGCACGCAC	61.030	57.895	9.12	0.00	46.04	5.34
4130	4555	3.784412	CGGGCACGCACGGTTAAG	61.784	66.667	5.60	0.00	39.48	1.85
4131	4556	4.097863	GGGCACGCACGGTTAAGC	62.098	66.667	0.00	0.00	0.00	3.09
4132	4557	3.047877	GGCACGCACGGTTAAGCT	61.048	61.111	2.76	0.00	0.00	3.74
4133	4558	2.613506	GGCACGCACGGTTAAGCTT	61.614	57.895	3.48	3.48	0.00	3.74
4135	4560	1.129809	CACGCACGGTTAAGCTTCG	59.870	57.895	0.00	2.83	0.00	3.79
4137	4562	2.479198	GCACGGTTAAGCTTCGGC	59.521	61.111	0.00	3.11	42.17	5.54
4138	4563	3.035576	GCACGGTTAAGCTTCGGCC	62.036	63.158	0.00	2.82	43.01	6.13
4139	4564	1.375523	CACGGTTAAGCTTCGGCCT	60.376	57.895	0.00	0.00	43.01	5.19
4140	4565	0.953960	CACGGTTAAGCTTCGGCCTT	60.954	55.000	0.00	0.00	43.01	4.35
4142	4567	1.002315	ACGGTTAAGCTTCGGCCTTTA	59.998	47.619	0.00	0.00	43.01	1.85
4143	4568	1.664151	CGGTTAAGCTTCGGCCTTTAG	59.336	52.381	0.00	0.00	43.01	1.85
4144	4569	1.400846	GGTTAAGCTTCGGCCTTTAGC	59.599	52.381	0.00	11.41	43.01	3.09
4145	4570	1.062148	GTTAAGCTTCGGCCTTTAGCG	59.938	52.381	0.00	0.00	45.17	4.26
4147	4572	1.019805	AAGCTTCGGCCTTTAGCGTC	61.020	55.000	0.00	0.00	45.17	5.19
4156	4581	1.202498	GCCTTTAGCGTCGGAAGGTAT	60.202	52.381	3.80	0.00	41.55	2.73
4158	4583	2.470821	CTTTAGCGTCGGAAGGTATGG	58.529	52.381	3.80	0.00	0.00	2.74
4159	4584	1.477553	TTAGCGTCGGAAGGTATGGT	58.522	50.000	3.80	0.00	0.00	3.55
4160	4585	0.742505	TAGCGTCGGAAGGTATGGTG	59.257	55.000	0.00	0.00	0.00	4.17
4161	4586	1.520787	GCGTCGGAAGGTATGGTGG	60.521	63.158	0.00	0.00	0.00	4.61
4162	4587	1.895238	CGTCGGAAGGTATGGTGGT	59.105	57.895	0.00	0.00	0.00	4.16
4163	4588	0.459585	CGTCGGAAGGTATGGTGGTG	60.460	60.000	0.00	0.00	0.00	4.17
4164	4589	0.743345	GTCGGAAGGTATGGTGGTGC	60.743	60.000	0.00	0.00	0.00	5.01
4165	4590	1.451387	CGGAAGGTATGGTGGTGCC	60.451	63.158	0.00	0.00	37.90	5.01
4173	4598	3.952508	TGGTGGTGCCATCGCTGT	61.953	61.111	0.00	0.00	43.61	4.40
4176	4601	2.112928	TGGTGCCATCGCTGTGTT	59.887	55.556	0.00	0.00	35.36	3.32
4178	4603	1.965930	GGTGCCATCGCTGTGTTCA	60.966	57.895	0.00	0.00	35.36	3.18
4182	4607	1.089920	GCCATCGCTGTGTTCATTCT	58.910	50.000	0.00	0.00	0.00	2.40
4183	4608	2.279741	GCCATCGCTGTGTTCATTCTA	58.720	47.619	0.00	0.00	0.00	2.10
4184	4609	2.030946	GCCATCGCTGTGTTCATTCTAC	59.969	50.000	0.00	0.00	0.00	2.59
4187	4612	4.504461	CCATCGCTGTGTTCATTCTACTAC	59.496	45.833	0.00	0.00	0.00	2.73
4188	4613	4.776795	TCGCTGTGTTCATTCTACTACA	57.223	40.909	0.00	0.00	0.00	2.74
4189	4614	5.324784	TCGCTGTGTTCATTCTACTACAT	57.675	39.130	0.00	0.00	0.00	2.29
4190	4615	6.445357	TCGCTGTGTTCATTCTACTACATA	57.555	37.500	0.00	0.00	0.00	2.29
4191	4616	6.263344	TCGCTGTGTTCATTCTACTACATAC	58.737	40.000	0.00	0.00	0.00	2.39
4192	4617	6.095021	TCGCTGTGTTCATTCTACTACATACT	59.905	38.462	0.00	0.00	0.00	2.12
4193	4618	7.281549	TCGCTGTGTTCATTCTACTACATACTA	59.718	37.037	0.00	0.00	0.00	1.82
4194	4619	7.376336	CGCTGTGTTCATTCTACTACATACTAC	59.624	40.741	0.00	0.00	0.00	2.73
4195	4620	7.376336	GCTGTGTTCATTCTACTACATACTACG	59.624	40.741	0.00	0.00	0.00	3.51
4196	4621	7.700505	TGTGTTCATTCTACTACATACTACGG	58.299	38.462	0.00	0.00	0.00	4.02
4197	4622	7.553760	TGTGTTCATTCTACTACATACTACGGA	59.446	37.037	0.00	0.00	0.00	4.69
4198	4623	8.400947	GTGTTCATTCTACTACATACTACGGAA	58.599	37.037	0.00	0.00	0.00	4.30
4199	4624	8.618677	TGTTCATTCTACTACATACTACGGAAG	58.381	37.037	0.00	0.00	0.00	3.46
4200	4625	7.199541	TCATTCTACTACATACTACGGAAGC	57.800	40.000	0.00	0.00	0.00	3.86
4201	4626	6.769341	TCATTCTACTACATACTACGGAAGCA	59.231	38.462	0.00	0.00	0.00	3.91
4203	4628	7.578310	TTCTACTACATACTACGGAAGCATT	57.422	36.000	0.00	0.00	0.00	3.56
4206	4631	8.727910	TCTACTACATACTACGGAAGCATTATG	58.272	37.037	0.00	0.00	0.00	1.90
4310	4957	2.251371	GGCAAGTGGCGACGTTTC	59.749	61.111	0.00	0.00	46.16	2.78
4343	4990	1.680314	GCCAAGGGAAGAGGCCAAG	60.680	63.158	5.01	0.00	42.58	3.61
4376	5023	2.312436	GCCTTTGCAAGCGCCAAAG	61.312	57.895	22.92	22.92	36.67	2.77
4388	5035	2.270986	GCCAAAGGCCAGGACACAG	61.271	63.158	5.01	0.00	44.06	3.66
4389	5036	2.270986	CCAAAGGCCAGGACACAGC	61.271	63.158	5.01	0.00	0.00	4.40
4398	5045	0.468029	CAGGACACAGCCAAAAGGGT	60.468	55.000	0.00	0.00	39.65	4.34
4502	5158	0.250209	CGCCTCCAGATTCCATCCAG	60.250	60.000	0.00	0.00	0.00	3.86
4503	5159	0.110104	GCCTCCAGATTCCATCCAGG	59.890	60.000	0.00	0.00	39.47	4.45
4504	5160	0.110104	CCTCCAGATTCCATCCAGGC	59.890	60.000	0.00	0.00	37.29	4.85
4505	5161	1.138568	CTCCAGATTCCATCCAGGCT	58.861	55.000	0.00	0.00	37.29	4.58
4506	5162	1.072015	CTCCAGATTCCATCCAGGCTC	59.928	57.143	0.00	0.00	37.29	4.70
4507	5163	0.841961	CCAGATTCCATCCAGGCTCA	59.158	55.000	0.00	0.00	37.29	4.26
4508	5164	1.213678	CCAGATTCCATCCAGGCTCAA	59.786	52.381	0.00	0.00	37.29	3.02
4509	5165	2.357465	CCAGATTCCATCCAGGCTCAAA	60.357	50.000	0.00	0.00	37.29	2.69
4604	5266	3.866582	CCCTCCACCGGCAGATCC	61.867	72.222	0.00	0.00	0.00	3.36
4787	5464	2.117051	GCCCCCTAGTTGTAGCTTAGT	58.883	52.381	0.00	0.00	0.00	2.24
4813	5490	0.099436	GTACCTAGTACCCACGCACG	59.901	60.000	0.00	0.00	33.38	5.34
4861	5562	4.125703	CTCCTGTGTGCTGATTCTTATCC	58.874	47.826	0.00	0.00	0.00	2.59
4867	5568	4.333926	GTGTGCTGATTCTTATCCTGGTTC	59.666	45.833	0.00	0.00	0.00	3.62
5114	5848	2.280592	ACGCCAAGTTCGACCACC	60.281	61.111	0.00	0.00	0.00	4.61
5137	5871	1.209128	GGGTACGCGACAGATTCATG	58.791	55.000	15.93	0.00	0.00	3.07
5152	5891	3.859414	ATGCTCGCTGGCTCCTCC	61.859	66.667	0.00	0.00	0.00	4.30
5155	5894	2.757508	CTCGCTGGCTCCTCCTCA	60.758	66.667	0.00	0.00	35.26	3.86
5166	5905	1.079543	CCTCCTCAGCTGGTTCACG	60.080	63.158	15.13	0.00	0.00	4.35
5204	5952	1.670406	GGTGTGGTCTCTGCAGCTG	60.670	63.158	10.11	10.11	0.00	4.24
5207	5955	1.196766	TGTGGTCTCTGCAGCTGGAT	61.197	55.000	17.12	0.00	0.00	3.41
5264	6021	2.672996	GGAGCGAGCAAGCCCAAA	60.673	61.111	0.00	0.00	38.01	3.28
5319	6076	8.706936	CATCTTAAACTGCATGCTACTGTATAG	58.293	37.037	20.33	7.56	0.00	1.31
5322	6082	9.529325	CTTAAACTGCATGCTACTGTATAGTTA	57.471	33.333	20.33	2.87	38.36	2.24
5347	6107	2.603021	TCCTTAAATGTGCTGGGCAAA	58.397	42.857	0.00	0.00	41.47	3.68
5420	6188	5.298527	CAGGCTAATCTGATTGATTCTTGCA	59.701	40.000	13.01	0.00	43.69	4.08
5426	6194	4.267536	TCTGATTGATTCTTGCAAGAGGG	58.732	43.478	27.02	12.87	36.22	4.30
5440	6208	3.304928	GCAAGAGGGAAATGACACTGTTG	60.305	47.826	0.00	0.00	44.05	3.33
5444	6212	1.680735	GGGAAATGACACTGTTGCACA	59.319	47.619	0.00	0.00	0.00	4.57
5560	6331	8.368668	GGTACAGTACCTATAAGCATTCTGATT	58.631	37.037	21.13	0.00	45.52	2.57
5586	6391	0.396139	AACATCGGAAGCCATGGCAT	60.396	50.000	37.18	27.80	44.88	4.40
5587	6392	1.105167	ACATCGGAAGCCATGGCATG	61.105	55.000	37.18	30.23	44.88	4.06
5588	6393	0.820482	CATCGGAAGCCATGGCATGA	60.820	55.000	37.18	26.71	44.88	3.07
5590	6395	0.106569	TCGGAAGCCATGGCATGATT	60.107	50.000	37.18	23.16	44.88	2.57
5591	6396	0.313043	CGGAAGCCATGGCATGATTC	59.687	55.000	37.18	28.80	44.88	2.52
5592	6397	1.405872	GGAAGCCATGGCATGATTCA	58.594	50.000	37.18	0.00	44.88	2.57
5593	6398	1.068127	GGAAGCCATGGCATGATTCAC	59.932	52.381	37.18	20.07	44.88	3.18
5594	6399	1.752498	GAAGCCATGGCATGATTCACA	59.248	47.619	37.18	0.00	44.88	3.58
5595	6400	1.855295	AGCCATGGCATGATTCACAA	58.145	45.000	37.18	0.00	44.88	3.33
5596	6401	1.479323	AGCCATGGCATGATTCACAAC	59.521	47.619	37.18	4.19	44.88	3.32
5597	6402	1.205179	GCCATGGCATGATTCACAACA	59.795	47.619	32.08	0.00	41.49	3.33
5598	6403	2.737359	GCCATGGCATGATTCACAACAG	60.737	50.000	32.08	8.70	41.49	3.16
5599	6404	2.536365	CATGGCATGATTCACAACAGC	58.464	47.619	22.91	0.00	0.00	4.40
5604	6412	2.475187	GCATGATTCACAACAGCGACTC	60.475	50.000	0.00	0.00	0.00	3.36
5634	6450	1.981256	TTGTTGTGCTCCTTCCTTCC	58.019	50.000	0.00	0.00	0.00	3.46
5635	6451	1.140312	TGTTGTGCTCCTTCCTTCCT	58.860	50.000	0.00	0.00	0.00	3.36
5636	6452	1.494721	TGTTGTGCTCCTTCCTTCCTT	59.505	47.619	0.00	0.00	0.00	3.36
5637	6453	2.155279	GTTGTGCTCCTTCCTTCCTTC	58.845	52.381	0.00	0.00	0.00	3.46
5824	6655	2.445085	ATGATGGACCCCGGCGTA	60.445	61.111	6.01	0.00	0.00	4.42
5848	6679	2.023741	TTCGAGATCGCGTACGGC	59.976	61.111	18.39	8.47	40.63	5.68
5873	6704	1.511305	GTGGACGATCAGAAGCGGA	59.489	57.895	0.00	0.00	38.99	5.54
5981	6812	0.172803	CTACGACAACCTCTTCCGGG	59.827	60.000	0.00	0.00	0.00	5.73
6028	6859	1.215382	CTTCTGCGTCATGTCGGGA	59.785	57.895	14.02	0.00	0.00	5.14
6035	6866	1.313091	CGTCATGTCGGGACTCTGGA	61.313	60.000	4.33	0.00	33.11	3.86
6104	6935	0.886563	CGAGGTCCTCAAGGTACGTT	59.113	55.000	19.15	0.00	36.34	3.99
6105	6936	1.402456	CGAGGTCCTCAAGGTACGTTG	60.402	57.143	19.78	19.78	36.34	4.10
6107	6938	2.036862	GAGGTCCTCAAGGTACGTTGTT	59.963	50.000	23.51	7.66	36.34	2.83
6108	6939	3.233507	AGGTCCTCAAGGTACGTTGTTA	58.766	45.455	23.51	8.46	36.34	2.41
6110	6941	4.081807	AGGTCCTCAAGGTACGTTGTTATC	60.082	45.833	23.51	12.88	36.34	1.75
6118	6977	3.057596	AGGTACGTTGTTATCGTCGGAAA	60.058	43.478	0.00	0.00	41.72	3.13
6135	6994	2.933906	GGAAAGATGATCGCCGTTGTTA	59.066	45.455	0.00	0.00	0.00	2.41
6402	7290	1.293498	CTTCGTGCAGCAGGTACCT	59.707	57.895	9.21	9.21	0.00	3.08
6404	7292	0.970640	TTCGTGCAGCAGGTACCTAA	59.029	50.000	15.80	0.00	0.00	2.69
6405	7293	0.970640	TCGTGCAGCAGGTACCTAAA	59.029	50.000	15.80	0.00	0.00	1.85
6406	7294	1.553248	TCGTGCAGCAGGTACCTAAAT	59.447	47.619	15.80	0.00	0.00	1.40
6408	7296	1.933853	GTGCAGCAGGTACCTAAATCG	59.066	52.381	15.80	2.55	0.00	3.34
6409	7297	1.134521	TGCAGCAGGTACCTAAATCGG	60.135	52.381	15.80	1.72	0.00	4.18
6410	7298	1.583054	CAGCAGGTACCTAAATCGGC	58.417	55.000	15.80	12.89	0.00	5.54
6411	7299	0.104304	AGCAGGTACCTAAATCGGCG	59.896	55.000	15.80	0.00	0.00	6.46
6413	7301	0.878961	CAGGTACCTAAATCGGCGCC	60.879	60.000	19.07	19.07	0.00	6.53
6414	7302	1.952635	GGTACCTAAATCGGCGCCG	60.953	63.158	42.13	42.13	41.35	6.46
6454	7364	8.082672	TCCATGATCTGAAACTCTGAAGATTA	57.917	34.615	0.00	0.00	29.59	1.75
6779	7706	0.755686	GAGATCCATCTCGCTGGGTT	59.244	55.000	0.76	0.00	43.29	4.11
6780	7707	0.467384	AGATCCATCTCGCTGGGTTG	59.533	55.000	0.00	0.00	36.89	3.77
6787	7714	1.078848	CTCGCTGGGTTGAAGGGAG	60.079	63.158	3.52	3.52	44.93	4.30
6807	7734	3.452627	GAGGAAGAGGTAGGCATTCAGAA	59.547	47.826	0.00	0.00	0.00	3.02
6835	7768	2.149803	TAGGTACGTGCGTGCTTGCT	62.150	55.000	9.18	4.51	35.36	3.91
6854	7787	2.411547	GCTTGTTTTCCAGACGATGACG	60.412	50.000	0.00	0.00	45.75	4.35
6935	7896	5.711036	TGTTTTGGTGTGATGATGATGATGA	59.289	36.000	0.00	0.00	0.00	2.92
6936	7897	6.378848	TGTTTTGGTGTGATGATGATGATGAT	59.621	34.615	0.00	0.00	0.00	2.45
6937	7898	6.385649	TTTGGTGTGATGATGATGATGATG	57.614	37.500	0.00	0.00	0.00	3.07
6973	7935	8.522830	TGAAATTGCTATAAGAAAACAAGGAGG	58.477	33.333	0.00	0.00	0.00	4.30
6986	7948	2.290323	ACAAGGAGGAATTGTAGCGCTT	60.290	45.455	18.68	0.00	39.06	4.68
7038	8000	7.959733	TGTTTGTGATTAGTGTTGATCGTATC	58.040	34.615	0.00	0.00	0.00	2.24
7083	8045	3.863142	AAGCACATTCAGATTTGCTCC	57.137	42.857	1.06	0.00	45.89	4.70
7121	10260	4.283212	TGAATCCATGTATCACCTCGCATA	59.717	41.667	0.00	0.00	0.00	3.14
7171	10310	8.243426	TCAAGTCTATTACCAAATTGCAATGAC	58.757	33.333	13.82	12.04	0.00	3.06
7184	10323	0.179936	CAATGACCTCTCCTCTGGGC	59.820	60.000	0.00	0.00	0.00	5.36
7212	10351	3.317993	CCAATAAGGGCATTTCTAACCGG	59.682	47.826	0.00	0.00	0.00	5.28
7226	10365	1.364269	AACCGGTCCCCAATAACTGA	58.636	50.000	8.04	0.00	0.00	3.41
7239	10378	3.753294	ATAACTGATTAGAGGCGTGGG	57.247	47.619	0.00	0.00	0.00	4.61
7310	10455	3.559171	GGAGCATAAATTATCCTCGGCCA	60.559	47.826	2.24	0.00	0.00	5.36
7334	10484	1.987855	CGCCTCCCTTACTCCACCA	60.988	63.158	0.00	0.00	0.00	4.17
7368	10518	4.494591	AGTAAAAAGTCCACTCTCCTCCT	58.505	43.478	0.00	0.00	0.00	3.69
7376	10540	0.324183	CACTCTCCTCCTCTGCCTCA	60.324	60.000	0.00	0.00	0.00	3.86
7377	10541	0.636101	ACTCTCCTCCTCTGCCTCAT	59.364	55.000	0.00	0.00	0.00	2.90
7378	10542	1.042229	CTCTCCTCCTCTGCCTCATG	58.958	60.000	0.00	0.00	0.00	3.07
7379	10543	1.047596	TCTCCTCCTCTGCCTCATGC	61.048	60.000	0.00	0.00	41.77	4.06
7380	10544	2.108566	CCTCCTCTGCCTCATGCG	59.891	66.667	0.00	0.00	45.60	4.73
7392	10556	4.457496	CATGCGCTCCACTCCCGT	62.457	66.667	9.73	0.00	0.00	5.28
7409	10573	4.015406	TGCCACATCTTCGCCGGT	62.015	61.111	1.90	0.00	0.00	5.28
7425	10603	2.682494	GTGTCGCCCCTCCCACTA	60.682	66.667	0.00	0.00	0.00	2.74
7434	10612	2.042843	CTCCCACTACCCTCCGCT	60.043	66.667	0.00	0.00	0.00	5.52
7436	10614	2.683933	CCCACTACCCTCCGCTGT	60.684	66.667	0.00	0.00	0.00	4.40
7500	10683	0.108804	CGCACAACCGGTAGATCTGT	60.109	55.000	8.00	4.99	0.00	3.41
7640	10824	1.069935	GATTCCGCCTCTAGCCACC	59.930	63.158	0.00	0.00	38.78	4.61
7783	10967	2.970324	GTGGTGCGCCGAGTTTCA	60.970	61.111	12.58	0.00	37.67	2.69
7885	11072	1.904412	CAAATTCGACGCATTTCGGTG	59.096	47.619	2.37	0.00	43.86	4.94
7937	11125	6.211184	AGGATGAATGCAAGTTTTGGTATTGA	59.789	34.615	0.00	0.00	0.00	2.57
7968	11156	9.800433	AAGATTACATCGATCTATTGATAGCAG	57.200	33.333	0.00	0.00	33.63	4.24
8024	11212	7.589958	TGGAATAAAGACTAGAGATGAGACC	57.410	40.000	0.00	0.00	0.00	3.85
8057	11250	5.649831	AGCAACATCTACTTCTTTGGAATCC	59.350	40.000	0.00	0.00	0.00	3.01
8083	11278	1.195674	GAAAGAAGTGTGGAAGCTCGC	59.804	52.381	0.00	0.00	0.00	5.03

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
79	80	5.015284	ACCAAACCTCTAAGCCTCCTAAAAT	59.985	40.000	0.00	0.00	0.00	1.82
240	242	9.959721	AGGATTTAAGTAATACACACATCTTGT	57.040	29.630	0.00	0.00	39.97	3.16
242	244	8.893727	GCAGGATTTAAGTAATACACACATCTT	58.106	33.333	0.00	0.00	28.53	2.40
267	269	1.340991	TGGGGTCTGATTAAGGCAAGC	60.341	52.381	0.00	0.00	29.21	4.01
307	309	4.695455	CAGTAACTCAATGTGTTAGGGTGG	59.305	45.833	8.00	0.00	31.54	4.61
331	333	7.754625	TGTTAACCACTAAACTGAACTTGAAC	58.245	34.615	2.48	0.00	0.00	3.18
334	336	7.758495	AGTTGTTAACCACTAAACTGAACTTG	58.242	34.615	10.46	0.00	30.17	3.16
358	360	0.037303	AGCACTGGGGTCATGTCAAG	59.963	55.000	0.00	0.00	0.00	3.02
360	362	1.376086	CAGCACTGGGGTCATGTCA	59.624	57.895	0.00	0.00	0.00	3.58
361	363	2.042831	GCAGCACTGGGGTCATGTC	61.043	63.158	0.00	0.00	0.00	3.06
362	364	2.034687	GCAGCACTGGGGTCATGT	59.965	61.111	0.00	0.00	0.00	3.21
390	392	2.761208	ACAGGTATCCAGACAGTGCTAC	59.239	50.000	0.00	0.00	0.00	3.58
440	450	2.105993	CCACTGGCTATACCCCCTAAAC	59.894	54.545	0.00	0.00	37.83	2.01
451	461	0.044855	AAGAGACCCCCACTGGCTAT	59.955	55.000	0.00	0.00	0.00	2.97
533	543	6.398918	TCACTACTGATTAGGCAGAAAGTTC	58.601	40.000	0.00	0.00	39.20	3.01
582	592	2.400399	CGAGCAAAGACGGTTAAGTGA	58.600	47.619	0.00	0.00	0.00	3.41
583	593	1.459592	CCGAGCAAAGACGGTTAAGTG	59.540	52.381	0.00	0.00	43.53	3.16
594	604	3.139077	ACTAGAAAACCACCGAGCAAAG	58.861	45.455	0.00	0.00	0.00	2.77
743	753	3.244033	CCTGTGTTTTTGTTTCAGGCA	57.756	42.857	0.00	0.00	39.02	4.75
745	755	3.525268	AGCCTGTGTTTTTGTTTCAGG	57.475	42.857	0.00	0.00	45.68	3.86
746	756	6.959671	TTTAAGCCTGTGTTTTTGTTTCAG	57.040	33.333	0.00	0.00	0.00	3.02
747	757	7.730364	TTTTTAAGCCTGTGTTTTTGTTTCA	57.270	28.000	0.00	0.00	0.00	2.69
819	829	2.614779	AGTGTGCTCATGATTCTGACG	58.385	47.619	0.00	0.00	0.00	4.35
928	942	5.726980	TCTTTCCGTAAACTAGTTGGCTA	57.273	39.130	9.34	0.00	0.00	3.93
979	993	1.742308	TATTATCACCTGGGCCTCCC	58.258	55.000	4.53	0.00	45.71	4.30
1120	1134	2.527951	GATGTGGTCTGGCCGAGCTT	62.528	60.000	21.49	10.77	40.75	3.74
1163	1181	2.289375	CGATCGGCGAGCTTCGAAG	61.289	63.158	22.65	21.02	43.74	3.79
1165	1183	3.199891	TCGATCGGCGAGCTTCGA	61.200	61.111	24.84	24.84	45.59	3.71
1194	1220	0.178992	CCTTCAAACCCACAGCTCCA	60.179	55.000	0.00	0.00	0.00	3.86
1195	1221	0.110486	TCCTTCAAACCCACAGCTCC	59.890	55.000	0.00	0.00	0.00	4.70
1196	1222	1.882623	CTTCCTTCAAACCCACAGCTC	59.117	52.381	0.00	0.00	0.00	4.09
1197	1223	1.986882	CTTCCTTCAAACCCACAGCT	58.013	50.000	0.00	0.00	0.00	4.24
1198	1224	0.315251	GCTTCCTTCAAACCCACAGC	59.685	55.000	0.00	0.00	0.00	4.40
1199	1225	0.961753	GGCTTCCTTCAAACCCACAG	59.038	55.000	0.00	0.00	0.00	3.66
1200	1226	0.260230	TGGCTTCCTTCAAACCCACA	59.740	50.000	0.00	0.00	0.00	4.17
1201	1227	1.546029	GATGGCTTCCTTCAAACCCAC	59.454	52.381	0.00	0.00	0.00	4.61
1202	1228	1.549950	GGATGGCTTCCTTCAAACCCA	60.550	52.381	11.96	0.00	41.78	4.51
1227	1253	1.462283	CGGTCTTCTAGTCGACGACAA	59.538	52.381	28.31	13.90	41.34	3.18
1233	1259	1.654954	GGCTGCGGTCTTCTAGTCGA	61.655	60.000	0.00	0.00	0.00	4.20
1238	1264	2.842188	TACCCGGCTGCGGTCTTCTA	62.842	60.000	8.77	0.00	34.66	2.10
1282	1308	4.084118	GCAAACAAGCAAACAAAGTCAACA	60.084	37.500	0.00	0.00	0.00	3.33
1288	1314	3.524541	AGGAGCAAACAAGCAAACAAAG	58.475	40.909	0.00	0.00	36.85	2.77
1335	1368	3.396685	AGAGGTAGGACTGAGCTTGAT	57.603	47.619	0.00	0.00	0.00	2.57
1352	1385	3.201290	CCACAGTAATAGCAGCCAAGAG	58.799	50.000	0.00	0.00	0.00	2.85
1503	1550	6.169557	TCTTCCACTACAGCAAGAACTAAA	57.830	37.500	0.00	0.00	0.00	1.85
1641	1688	4.954875	CCATTCAGGGTAAGCAAAACAAA	58.045	39.130	0.00	0.00	0.00	2.83
1759	1806	5.240844	GCCACTTTATTCCGGCTATGTAAAT	59.759	40.000	0.00	0.00	41.50	1.40
1807	1854	4.161754	ACAAGTATTTAGGAACGGAGGGAG	59.838	45.833	0.00	0.00	0.00	4.30
1808	1855	4.098894	ACAAGTATTTAGGAACGGAGGGA	58.901	43.478	0.00	0.00	0.00	4.20
1809	1856	4.161754	AGACAAGTATTTAGGAACGGAGGG	59.838	45.833	0.00	0.00	0.00	4.30
1810	1857	5.340439	AGACAAGTATTTAGGAACGGAGG	57.660	43.478	0.00	0.00	0.00	4.30
1811	1858	7.097834	AGAAAGACAAGTATTTAGGAACGGAG	58.902	38.462	0.00	0.00	0.00	4.63
1812	1859	7.001099	AGAAAGACAAGTATTTAGGAACGGA	57.999	36.000	0.00	0.00	0.00	4.69
1813	1860	7.491696	CCTAGAAAGACAAGTATTTAGGAACGG	59.508	40.741	4.01	0.00	26.70	4.44
1814	1861	7.010275	GCCTAGAAAGACAAGTATTTAGGAACG	59.990	40.741	11.40	0.00	26.70	3.95
1815	1862	7.822822	TGCCTAGAAAGACAAGTATTTAGGAAC	59.177	37.037	11.40	0.00	26.70	3.62
1816	1863	7.913789	TGCCTAGAAAGACAAGTATTTAGGAA	58.086	34.615	11.40	1.02	26.70	3.36
1817	1864	7.490657	TGCCTAGAAAGACAAGTATTTAGGA	57.509	36.000	11.40	0.00	26.70	2.94
1818	1865	8.738645	AATGCCTAGAAAGACAAGTATTTAGG	57.261	34.615	5.26	5.26	0.00	2.69
1820	1867	9.733556	TGAAATGCCTAGAAAGACAAGTATTTA	57.266	29.630	0.00	0.00	0.00	1.40
1821	1868	8.635765	TGAAATGCCTAGAAAGACAAGTATTT	57.364	30.769	0.00	0.00	0.00	1.40
1822	1869	8.515414	GTTGAAATGCCTAGAAAGACAAGTATT	58.485	33.333	0.00	0.00	0.00	1.89
1823	1870	7.665559	TGTTGAAATGCCTAGAAAGACAAGTAT	59.334	33.333	0.00	0.00	0.00	2.12
1824	1871	6.995686	TGTTGAAATGCCTAGAAAGACAAGTA	59.004	34.615	0.00	0.00	0.00	2.24
1825	1872	5.827797	TGTTGAAATGCCTAGAAAGACAAGT	59.172	36.000	0.00	0.00	0.00	3.16
1826	1873	6.317789	TGTTGAAATGCCTAGAAAGACAAG	57.682	37.500	0.00	0.00	0.00	3.16
1827	1874	6.707440	TTGTTGAAATGCCTAGAAAGACAA	57.293	33.333	0.00	0.00	0.00	3.18
1828	1875	6.707440	TTTGTTGAAATGCCTAGAAAGACA	57.293	33.333	0.00	0.00	0.00	3.41
1829	1876	7.327032	GTCATTTGTTGAAATGCCTAGAAAGAC	59.673	37.037	0.00	0.00	45.61	3.01
1830	1877	7.231317	AGTCATTTGTTGAAATGCCTAGAAAGA	59.769	33.333	0.00	0.00	45.61	2.52
1831	1878	7.373493	AGTCATTTGTTGAAATGCCTAGAAAG	58.627	34.615	0.00	0.00	45.61	2.62
1832	1879	7.288810	AGTCATTTGTTGAAATGCCTAGAAA	57.711	32.000	0.00	0.00	45.61	2.52
1833	1880	6.899393	AGTCATTTGTTGAAATGCCTAGAA	57.101	33.333	0.00	0.00	45.61	2.10
1834	1881	6.939730	TGTAGTCATTTGTTGAAATGCCTAGA	59.060	34.615	0.00	0.00	45.61	2.43
1835	1882	7.144722	TGTAGTCATTTGTTGAAATGCCTAG	57.855	36.000	0.00	0.00	45.61	3.02
1836	1883	7.701539	ATGTAGTCATTTGTTGAAATGCCTA	57.298	32.000	0.00	0.00	45.61	3.93
1837	1884	6.594788	ATGTAGTCATTTGTTGAAATGCCT	57.405	33.333	0.00	0.00	45.61	4.75
1838	1885	6.468956	CGTATGTAGTCATTTGTTGAAATGCC	59.531	38.462	0.00	0.00	45.61	4.40
1839	1886	6.468956	CCGTATGTAGTCATTTGTTGAAATGC	59.531	38.462	0.00	0.00	45.61	3.56
1840	1887	7.747888	TCCGTATGTAGTCATTTGTTGAAATG	58.252	34.615	0.00	0.00	46.84	2.32
1841	1888	7.414098	GCTCCGTATGTAGTCATTTGTTGAAAT	60.414	37.037	0.00	0.00	35.70	2.17
1842	1889	6.128391	GCTCCGTATGTAGTCATTTGTTGAAA	60.128	38.462	0.00	0.00	35.70	2.69
1843	1890	5.350365	GCTCCGTATGTAGTCATTTGTTGAA	59.650	40.000	0.00	0.00	35.70	2.69
1844	1891	4.868171	GCTCCGTATGTAGTCATTTGTTGA	59.132	41.667	0.00	0.00	35.70	3.18
1845	1892	4.629634	TGCTCCGTATGTAGTCATTTGTTG	59.370	41.667	0.00	0.00	35.70	3.33
1846	1893	4.827692	TGCTCCGTATGTAGTCATTTGTT	58.172	39.130	0.00	0.00	35.70	2.83
1847	1894	4.465632	TGCTCCGTATGTAGTCATTTGT	57.534	40.909	0.00	0.00	35.70	2.83
1848	1895	5.794687	TTTGCTCCGTATGTAGTCATTTG	57.205	39.130	0.00	0.00	35.70	2.32
1849	1896	6.597672	TCATTTTGCTCCGTATGTAGTCATTT	59.402	34.615	0.00	0.00	35.70	2.32
1850	1897	6.112734	TCATTTTGCTCCGTATGTAGTCATT	58.887	36.000	0.00	0.00	35.70	2.57
1851	1898	5.670485	TCATTTTGCTCCGTATGTAGTCAT	58.330	37.500	0.00	0.00	38.00	3.06
1852	1899	5.079689	TCATTTTGCTCCGTATGTAGTCA	57.920	39.130	0.00	0.00	0.00	3.41
1853	1900	5.005779	CACTCATTTTGCTCCGTATGTAGTC	59.994	44.000	0.00	0.00	0.00	2.59
1854	1901	4.870426	CACTCATTTTGCTCCGTATGTAGT	59.130	41.667	0.00	0.00	0.00	2.73
1855	1902	5.109210	TCACTCATTTTGCTCCGTATGTAG	58.891	41.667	0.00	0.00	0.00	2.74
1856	1903	5.079689	TCACTCATTTTGCTCCGTATGTA	57.920	39.130	0.00	0.00	0.00	2.29
1857	1904	3.937814	TCACTCATTTTGCTCCGTATGT	58.062	40.909	0.00	0.00	0.00	2.29
1858	1905	4.944962	TTCACTCATTTTGCTCCGTATG	57.055	40.909	0.00	0.00	0.00	2.39
1859	1906	5.431765	AGATTCACTCATTTTGCTCCGTAT	58.568	37.500	0.00	0.00	0.00	3.06
1860	1907	4.832248	AGATTCACTCATTTTGCTCCGTA	58.168	39.130	0.00	0.00	0.00	4.02
1861	1908	3.679389	AGATTCACTCATTTTGCTCCGT	58.321	40.909	0.00	0.00	0.00	4.69
1862	1909	4.631377	TGTAGATTCACTCATTTTGCTCCG	59.369	41.667	0.00	0.00	0.00	4.63
1863	1910	5.645497	AGTGTAGATTCACTCATTTTGCTCC	59.355	40.000	0.00	0.00	44.07	4.70
1864	1911	6.734104	AGTGTAGATTCACTCATTTTGCTC	57.266	37.500	0.00	0.00	44.07	4.26
1903	1950	9.074576	TCAAATGACTACTACATACGGATGTAT	57.925	33.333	20.64	13.02	45.42	2.29
1904	1951	8.454570	TCAAATGACTACTACATACGGATGTA	57.545	34.615	19.32	19.32	44.77	2.29
1906	1953	8.642908	TTTCAAATGACTACTACATACGGATG	57.357	34.615	5.94	5.94	39.16	3.51
1907	1954	9.261180	CATTTCAAATGACTACTACATACGGAT	57.739	33.333	3.82	0.00	0.00	4.18
1908	1955	8.255206	ACATTTCAAATGACTACTACATACGGA	58.745	33.333	17.30	0.00	0.00	4.69
1909	1956	8.420374	ACATTTCAAATGACTACTACATACGG	57.580	34.615	17.30	0.00	0.00	4.02
1910	1957	9.302345	AGACATTTCAAATGACTACTACATACG	57.698	33.333	17.30	0.00	0.00	3.06
1934	1981	8.248945	CCGTTCCTAAATACTTGTCTTTCTAGA	58.751	37.037	0.00	0.00	0.00	2.43
1935	1982	8.248945	TCCGTTCCTAAATACTTGTCTTTCTAG	58.751	37.037	0.00	0.00	0.00	2.43
1936	1983	8.125978	TCCGTTCCTAAATACTTGTCTTTCTA	57.874	34.615	0.00	0.00	0.00	2.10
1937	1984	7.001099	TCCGTTCCTAAATACTTGTCTTTCT	57.999	36.000	0.00	0.00	0.00	2.52
1938	1985	6.313164	CCTCCGTTCCTAAATACTTGTCTTTC	59.687	42.308	0.00	0.00	0.00	2.62
1939	1986	6.171213	CCTCCGTTCCTAAATACTTGTCTTT	58.829	40.000	0.00	0.00	0.00	2.52
1940	1987	5.338137	CCCTCCGTTCCTAAATACTTGTCTT	60.338	44.000	0.00	0.00	0.00	3.01
1941	1988	4.161754	CCCTCCGTTCCTAAATACTTGTCT	59.838	45.833	0.00	0.00	0.00	3.41
1942	1989	4.161001	TCCCTCCGTTCCTAAATACTTGTC	59.839	45.833	0.00	0.00	0.00	3.18
1943	1990	4.098894	TCCCTCCGTTCCTAAATACTTGT	58.901	43.478	0.00	0.00	0.00	3.16
1944	1991	4.161754	ACTCCCTCCGTTCCTAAATACTTG	59.838	45.833	0.00	0.00	0.00	3.16
1945	1992	4.359996	ACTCCCTCCGTTCCTAAATACTT	58.640	43.478	0.00	0.00	0.00	2.24
1946	1993	3.991683	ACTCCCTCCGTTCCTAAATACT	58.008	45.455	0.00	0.00	0.00	2.12
1947	1994	7.178097	ACATATACTCCCTCCGTTCCTAAATAC	59.822	40.741	0.00	0.00	0.00	1.89
1948	1995	7.243824	ACATATACTCCCTCCGTTCCTAAATA	58.756	38.462	0.00	0.00	0.00	1.40
1949	1996	6.082707	ACATATACTCCCTCCGTTCCTAAAT	58.917	40.000	0.00	0.00	0.00	1.40
1950	1997	5.461327	ACATATACTCCCTCCGTTCCTAAA	58.539	41.667	0.00	0.00	0.00	1.85
1951	1998	5.070823	ACATATACTCCCTCCGTTCCTAA	57.929	43.478	0.00	0.00	0.00	2.69
1952	1999	4.736611	ACATATACTCCCTCCGTTCCTA	57.263	45.455	0.00	0.00	0.00	2.94
1953	2000	3.614568	ACATATACTCCCTCCGTTCCT	57.385	47.619	0.00	0.00	0.00	3.36
1954	2001	5.715753	AGATAACATATACTCCCTCCGTTCC	59.284	44.000	0.00	0.00	0.00	3.62
1955	2002	6.127675	GGAGATAACATATACTCCCTCCGTTC	60.128	46.154	0.00	0.00	41.89	3.95
1956	2003	5.715753	GGAGATAACATATACTCCCTCCGTT	59.284	44.000	0.00	0.00	41.89	4.44
1957	2004	5.262804	GGAGATAACATATACTCCCTCCGT	58.737	45.833	0.00	0.00	41.89	4.69
1958	2005	5.838531	GGAGATAACATATACTCCCTCCG	57.161	47.826	0.00	0.00	41.89	4.63
1963	2010	7.554959	TCCTTTGGGAGATAACATATACTCC	57.445	40.000	0.00	0.00	45.50	3.85
1964	2011	9.442047	CATTCCTTTGGGAGATAACATATACTC	57.558	37.037	0.00	0.00	43.29	2.59
1965	2012	8.949421	ACATTCCTTTGGGAGATAACATATACT	58.051	33.333	0.00	0.00	43.29	2.12
1968	2015	9.965902	GATACATTCCTTTGGGAGATAACATAT	57.034	33.333	0.00	0.00	43.29	1.78
1989	2036	3.530265	AAATACGCCAACGAGGATACA	57.470	42.857	2.86	0.00	43.93	2.29
2000	2047	7.450074	AGATATGGTCATAGAAAAATACGCCA	58.550	34.615	0.00	0.00	0.00	5.69
2003	2050	9.712305	AGGAAGATATGGTCATAGAAAAATACG	57.288	33.333	0.00	0.00	0.00	3.06
2141	2188	3.323115	TCACCTCATATCTGTCAGATGGC	59.677	47.826	23.17	0.00	35.37	4.40
2182	2232	5.745227	TGGTTTGATCTCCCTTTTAGCTAG	58.255	41.667	0.00	0.00	0.00	3.42
2183	2233	5.339200	CCTGGTTTGATCTCCCTTTTAGCTA	60.339	44.000	0.00	0.00	0.00	3.32
2184	2234	4.568592	CCTGGTTTGATCTCCCTTTTAGCT	60.569	45.833	0.00	0.00	0.00	3.32
2185	2235	3.696548	CCTGGTTTGATCTCCCTTTTAGC	59.303	47.826	0.00	0.00	0.00	3.09
2224	2274	1.980765	AGAGCTCCATTGTGTCCTCAA	59.019	47.619	10.93	0.00	0.00	3.02
2225	2275	1.649321	AGAGCTCCATTGTGTCCTCA	58.351	50.000	10.93	0.00	0.00	3.86
2226	2276	2.159028	GGTAGAGCTCCATTGTGTCCTC	60.159	54.545	10.93	0.00	0.00	3.71
2227	2277	1.834263	GGTAGAGCTCCATTGTGTCCT	59.166	52.381	10.93	0.00	0.00	3.85
2228	2278	1.134371	GGGTAGAGCTCCATTGTGTCC	60.134	57.143	10.93	1.71	0.00	4.02
2229	2279	1.834263	AGGGTAGAGCTCCATTGTGTC	59.166	52.381	10.93	0.00	0.00	3.67
2230	2280	1.556911	CAGGGTAGAGCTCCATTGTGT	59.443	52.381	10.93	0.00	0.00	3.72
2303	2353	6.407074	GGAGAATTAAGAGGAACGGATCAAGA	60.407	42.308	0.00	0.00	0.00	3.02
2306	2356	4.962995	AGGAGAATTAAGAGGAACGGATCA	59.037	41.667	0.00	0.00	0.00	2.92
2312	2362	6.937392	ACTGTGTAGGAGAATTAAGAGGAAC	58.063	40.000	0.00	0.00	0.00	3.62
2319	2369	8.934023	ATGGAAAAACTGTGTAGGAGAATTAA	57.066	30.769	0.00	0.00	0.00	1.40
2321	2371	7.175641	CAGATGGAAAAACTGTGTAGGAGAATT	59.824	37.037	0.00	0.00	0.00	2.17
2322	2372	6.656693	CAGATGGAAAAACTGTGTAGGAGAAT	59.343	38.462	0.00	0.00	0.00	2.40
2339	2393	4.356436	TCACAGAGGAGAATCAGATGGAA	58.644	43.478	0.00	0.00	36.25	3.53
2368	2430	6.042777	TGCAACAGCTGTGACTATACTATTC	58.957	40.000	22.49	0.00	0.00	1.75
2415	2477	4.219725	GCCTGCCACCTTGTTTTTCTATTA	59.780	41.667	0.00	0.00	0.00	0.98
2428	2491	3.007920	CCTCTCTGCCTGCCACCT	61.008	66.667	0.00	0.00	0.00	4.00
2495	2558	8.545420	CAAGTATCAAATCTAATGCAAATTGCC	58.455	33.333	15.98	0.00	44.23	4.52
2528	2591	4.157289	AGACCATCAATCAGTTTGCATCAC	59.843	41.667	0.00	0.00	35.16	3.06
2543	2606	2.447920	TCCCACCGGAGACCATCA	59.552	61.111	9.46	0.00	32.86	3.07
2585	2648	4.829968	ACTGACATGATCTCACTTTGGAG	58.170	43.478	0.00	0.00	36.21	3.86
2636	2708	4.098044	TCCTTTCGATGGTGCTTAGTCTAG	59.902	45.833	5.12	0.00	0.00	2.43
2650	2722	6.372937	GTGATTCCTTCTTTTCTCCTTTCGAT	59.627	38.462	0.00	0.00	0.00	3.59
2660	2732	4.830826	AACGTGGTGATTCCTTCTTTTC	57.169	40.909	0.00	0.00	37.07	2.29
2674	2750	2.235402	ACCATTTCGATCCTAACGTGGT	59.765	45.455	0.00	0.00	34.50	4.16
2754	2831	0.251073	TTTCTACGGCTGTTAGGGCC	59.749	55.000	1.99	0.00	45.57	5.80
2755	2832	1.366679	GTTTCTACGGCTGTTAGGGC	58.633	55.000	1.99	0.00	0.00	5.19
2756	2833	1.406477	GGGTTTCTACGGCTGTTAGGG	60.406	57.143	1.99	0.00	0.00	3.53
2769	2879	2.014033	TTTTCCGGCAGGGGGTTTCT	62.014	55.000	2.05	0.00	38.33	2.52
2778	2888	2.148916	GGAAAACCTTTTTCCGGCAG	57.851	50.000	13.30	0.00	38.62	4.85
2784	2894	2.698274	TGGGAGCAGGAAAACCTTTTTC	59.302	45.455	3.25	3.25	0.00	2.29
2785	2895	2.758130	TGGGAGCAGGAAAACCTTTTT	58.242	42.857	0.00	0.00	0.00	1.94
2786	2896	2.470057	TGGGAGCAGGAAAACCTTTT	57.530	45.000	0.00	0.00	0.00	2.27
2787	2897	2.470057	TTGGGAGCAGGAAAACCTTT	57.530	45.000	0.00	0.00	0.00	3.11
2788	2898	2.702270	ATTGGGAGCAGGAAAACCTT	57.298	45.000	0.00	0.00	0.00	3.50
2789	2899	2.634453	CAAATTGGGAGCAGGAAAACCT	59.366	45.455	0.00	0.00	0.00	3.50
2790	2900	2.871637	GCAAATTGGGAGCAGGAAAACC	60.872	50.000	0.00	0.00	0.00	3.27
2791	2901	2.224257	TGCAAATTGGGAGCAGGAAAAC	60.224	45.455	0.00	0.00	33.75	2.43
2792	2902	2.045524	TGCAAATTGGGAGCAGGAAAA	58.954	42.857	0.00	0.00	33.75	2.29
2793	2903	1.344114	GTGCAAATTGGGAGCAGGAAA	59.656	47.619	0.00	0.00	39.21	3.13
2794	2904	0.968405	GTGCAAATTGGGAGCAGGAA	59.032	50.000	0.00	0.00	39.21	3.36
2795	2905	0.112995	AGTGCAAATTGGGAGCAGGA	59.887	50.000	0.00	0.00	39.21	3.86
2796	2906	0.971386	AAGTGCAAATTGGGAGCAGG	59.029	50.000	0.00	0.00	39.21	4.85
2797	2907	2.409975	CAAAGTGCAAATTGGGAGCAG	58.590	47.619	5.10	0.00	39.21	4.24
2798	2908	1.540797	GCAAAGTGCAAATTGGGAGCA	60.541	47.619	12.98	0.00	44.26	4.26
2799	2909	1.150827	GCAAAGTGCAAATTGGGAGC	58.849	50.000	12.98	0.00	44.26	4.70
2818	2928	2.124736	CTACCGTGGCATGGGGTG	60.125	66.667	28.48	14.34	35.28	4.61
2819	2929	4.109675	GCTACCGTGGCATGGGGT	62.110	66.667	28.48	19.48	37.84	4.95
2820	2930	4.875713	GGCTACCGTGGCATGGGG	62.876	72.222	28.48	20.59	0.00	4.96
2857	2967	4.847516	TCGCGCCGATCCTTGACG	62.848	66.667	0.00	0.00	0.00	4.35
2858	2968	2.956964	CTCGCGCCGATCCTTGAC	60.957	66.667	0.00	0.00	34.61	3.18
2859	2969	3.411418	GACTCGCGCCGATCCTTGA	62.411	63.158	0.00	0.00	34.61	3.02
2860	2970	2.956964	GACTCGCGCCGATCCTTG	60.957	66.667	0.00	0.00	34.61	3.61
2861	2971	4.208686	GGACTCGCGCCGATCCTT	62.209	66.667	0.00	0.00	34.61	3.36
2894	3013	1.259609	CTGCTTTCCCTGATGCCAAA	58.740	50.000	0.00	0.00	0.00	3.28
2906	3025	1.510480	AACCACTGCTCGCTGCTTTC	61.510	55.000	0.00	0.00	43.37	2.62
2911	3030	1.301244	ACTGAACCACTGCTCGCTG	60.301	57.895	0.00	0.00	0.00	5.18
2912	3031	1.301244	CACTGAACCACTGCTCGCT	60.301	57.895	0.00	0.00	0.00	4.93
2914	3033	0.032678	ACTCACTGAACCACTGCTCG	59.967	55.000	0.00	0.00	0.00	5.03
2930	3049	2.872245	TGCTTTGCTAACACACTCACTC	59.128	45.455	0.00	0.00	0.00	3.51
2935	3054	2.426738	TGCTTTGCTTTGCTAACACACT	59.573	40.909	0.00	0.00	0.00	3.55
2936	3055	2.808244	TGCTTTGCTTTGCTAACACAC	58.192	42.857	0.00	0.00	0.00	3.82
2956	3078	1.247567	GTTAACACCTGGCAGTGCAT	58.752	50.000	18.61	7.32	41.67	3.96
2978	3100	2.048603	GGGCTCCTCACAACCATGC	61.049	63.158	0.00	0.00	0.00	4.06
2980	3102	0.842030	TCAGGGCTCCTCACAACCAT	60.842	55.000	0.00	0.00	0.00	3.55
2986	3108	2.568623	TCTTTTTCAGGGCTCCTCAC	57.431	50.000	0.00	0.00	0.00	3.51
2987	3109	3.593442	TTTCTTTTTCAGGGCTCCTCA	57.407	42.857	0.00	0.00	0.00	3.86
3002	3124	8.774546	ATTCTTTCTTCTTCTTCCCTTTTCTT	57.225	30.769	0.00	0.00	0.00	2.52
3003	3125	8.001292	TGATTCTTTCTTCTTCTTCCCTTTTCT	58.999	33.333	0.00	0.00	0.00	2.52
3004	3126	8.079203	GTGATTCTTTCTTCTTCTTCCCTTTTC	58.921	37.037	0.00	0.00	0.00	2.29
3007	3129	6.007076	GGTGATTCTTTCTTCTTCTTCCCTT	58.993	40.000	0.00	0.00	0.00	3.95
3009	3131	5.316987	TGGTGATTCTTTCTTCTTCTTCCC	58.683	41.667	0.00	0.00	0.00	3.97
3011	3133	6.150809	AGCATGGTGATTCTTTCTTCTTCTTC	59.849	38.462	0.00	0.00	0.00	2.87
3103	3238	3.934962	GCATCTCGCCTCCCCCTC	61.935	72.222	0.00	0.00	32.94	4.30
3127	3262	1.899437	TAGGCGGAGGGACAAAGCAG	61.899	60.000	0.00	0.00	0.00	4.24
3142	3277	3.048501	GTTTCTACGGTCGCTATTAGGC	58.951	50.000	0.00	0.00	0.00	3.93
3143	3278	3.294943	CGTTTCTACGGTCGCTATTAGG	58.705	50.000	0.00	0.00	43.94	2.69
3157	3292	1.939974	CATGCTAGCCTGCGTTTCTA	58.060	50.000	13.29	0.00	35.36	2.10
3158	3293	1.372087	GCATGCTAGCCTGCGTTTCT	61.372	55.000	25.89	0.00	35.36	2.52
3159	3294	1.063166	GCATGCTAGCCTGCGTTTC	59.937	57.895	25.89	4.29	35.36	2.78
3171	3321	0.250901	AAAACTCTGTCCGGCATGCT	60.251	50.000	18.92	0.00	0.00	3.79
3172	3322	0.598065	AAAAACTCTGTCCGGCATGC	59.402	50.000	9.90	9.90	0.00	4.06
3174	3324	1.880027	GACAAAAACTCTGTCCGGCAT	59.120	47.619	0.00	0.00	37.77	4.40
3177	3327	2.680841	TGTTGACAAAAACTCTGTCCGG	59.319	45.455	0.00	0.00	42.13	5.14
3181	3331	4.156008	GTGACCTGTTGACAAAAACTCTGT	59.844	41.667	0.00	0.00	0.00	3.41
3187	3337	2.094575	CGACGTGACCTGTTGACAAAAA	59.905	45.455	0.00	0.00	0.00	1.94
3191	3341	0.248743	GACGACGTGACCTGTTGACA	60.249	55.000	4.58	0.00	0.00	3.58
3192	3342	1.266786	CGACGACGTGACCTGTTGAC	61.267	60.000	4.58	0.00	34.56	3.18
3195	3400	2.333938	CCGACGACGTGACCTGTT	59.666	61.111	4.58	0.00	37.88	3.16
3221	3426	1.001764	CAGATTCAGGCCAGCACCA	60.002	57.895	5.01	0.00	0.00	4.17
3227	3432	0.035534	TTAAGCGCAGATTCAGGCCA	60.036	50.000	11.47	0.00	37.33	5.36
3228	3433	0.659957	CTTAAGCGCAGATTCAGGCC	59.340	55.000	11.47	0.00	37.33	5.19
3241	3446	2.491675	AACCTACTGTGGCCTTAAGC	57.508	50.000	3.32	0.00	42.60	3.09
3252	3457	6.576662	TCAGAGTTTCAGACTAACCTACTG	57.423	41.667	0.00	0.00	39.19	2.74
3257	3462	5.927115	ACGAATTCAGAGTTTCAGACTAACC	59.073	40.000	6.22	0.00	39.19	2.85
3267	3475	5.067805	AGGAAAAAGCACGAATTCAGAGTTT	59.932	36.000	6.22	0.00	0.00	2.66
3279	3487	2.872245	TCACTCTTGAGGAAAAAGCACG	59.128	45.455	2.55	0.00	0.00	5.34
3290	3498	0.453793	ACCGAGCGATCACTCTTGAG	59.546	55.000	9.00	0.00	34.35	3.02
3291	3499	0.171231	CACCGAGCGATCACTCTTGA	59.829	55.000	9.00	0.00	34.35	3.02
3292	3500	0.109086	ACACCGAGCGATCACTCTTG	60.109	55.000	9.00	8.08	34.35	3.02
3306	3521	1.202533	ACTCCTCACAAGACAACACCG	60.203	52.381	0.00	0.00	0.00	4.94
3308	3523	3.179443	TCACTCCTCACAAGACAACAC	57.821	47.619	0.00	0.00	0.00	3.32
3312	3527	2.497675	GGCTATCACTCCTCACAAGACA	59.502	50.000	0.00	0.00	0.00	3.41
3314	3529	2.820178	TGGCTATCACTCCTCACAAGA	58.180	47.619	0.00	0.00	0.00	3.02
3337	3552	1.444212	CCGATGCCAAAGCCAAACG	60.444	57.895	0.00	0.00	38.69	3.60
3339	3554	1.531739	GACCCGATGCCAAAGCCAAA	61.532	55.000	0.00	0.00	38.69	3.28
3345	3560	0.250234	CAGAGAGACCCGATGCCAAA	59.750	55.000	0.00	0.00	0.00	3.28
3347	3562	2.060383	CCAGAGAGACCCGATGCCA	61.060	63.158	0.00	0.00	0.00	4.92
3350	3565	1.760086	AGGCCAGAGAGACCCGATG	60.760	63.158	5.01	0.00	0.00	3.84
3351	3566	1.760086	CAGGCCAGAGAGACCCGAT	60.760	63.158	5.01	0.00	0.00	4.18
3352	3567	2.363018	CAGGCCAGAGAGACCCGA	60.363	66.667	5.01	0.00	0.00	5.14
3353	3568	3.465403	CCAGGCCAGAGAGACCCG	61.465	72.222	5.01	0.00	0.00	5.28
3354	3569	2.284995	ACCAGGCCAGAGAGACCC	60.285	66.667	5.01	0.00	0.00	4.46
3355	3570	2.664081	CCACCAGGCCAGAGAGACC	61.664	68.421	5.01	0.00	0.00	3.85
3366	3581	2.299582	CTCTATGAGCATCTCCACCAGG	59.700	54.545	0.00	0.00	34.92	4.45
3367	3582	3.229293	TCTCTATGAGCATCTCCACCAG	58.771	50.000	0.00	0.00	34.92	4.00
3374	3589	4.275689	CGAGTCAACTCTCTATGAGCATCT	59.724	45.833	8.43	0.00	46.41	2.90
3442	3680	0.757188	ACCCCGCACCATTTTCACAA	60.757	50.000	0.00	0.00	0.00	3.33
3446	3684	2.261361	GCACCCCGCACCATTTTC	59.739	61.111	0.00	0.00	41.79	2.29
3473	3711	2.093553	GCTCACTGCTTTCTCCTCATCT	60.094	50.000	0.00	0.00	38.95	2.90
3476	3714	1.001746	CTGCTCACTGCTTTCTCCTCA	59.998	52.381	0.00	0.00	43.37	3.86
3477	3715	1.001860	ACTGCTCACTGCTTTCTCCTC	59.998	52.381	0.00	0.00	43.37	3.71
3478	3716	1.055040	ACTGCTCACTGCTTTCTCCT	58.945	50.000	0.00	0.00	43.37	3.69
3480	3718	2.067766	CTCACTGCTCACTGCTTTCTC	58.932	52.381	0.00	0.00	43.37	2.87
3481	3719	1.877258	GCTCACTGCTCACTGCTTTCT	60.877	52.381	0.00	0.00	43.37	2.52
3482	3720	0.516439	GCTCACTGCTCACTGCTTTC	59.484	55.000	0.00	0.00	43.37	2.62
3525	3892	1.002430	TCAGTGAGTTGGTGCTGATCC	59.998	52.381	0.00	0.00	33.62	3.36
3565	3940	1.978580	GGAAGACAGACCAAGGGAAGA	59.021	52.381	0.00	0.00	0.00	2.87
3567	3942	1.064825	GGGAAGACAGACCAAGGGAA	58.935	55.000	0.00	0.00	0.00	3.97
3568	3943	1.192146	CGGGAAGACAGACCAAGGGA	61.192	60.000	0.00	0.00	0.00	4.20
3569	3944	1.296715	CGGGAAGACAGACCAAGGG	59.703	63.158	0.00	0.00	0.00	3.95
3570	3945	1.296715	CCGGGAAGACAGACCAAGG	59.703	63.158	0.00	0.00	0.00	3.61
3572	3947	1.152204	TCCCGGGAAGACAGACCAA	60.152	57.895	24.50	0.00	0.00	3.67
3573	3948	1.911766	GTCCCGGGAAGACAGACCA	60.912	63.158	28.84	0.00	34.27	4.02
3575	3950	1.292541	GTGTCCCGGGAAGACAGAC	59.707	63.158	28.84	12.55	44.57	3.51
3576	3951	2.273179	CGTGTCCCGGGAAGACAGA	61.273	63.158	28.84	0.00	44.57	3.41
3577	3952	2.261671	CGTGTCCCGGGAAGACAG	59.738	66.667	28.84	16.33	44.57	3.51
3578	3953	2.522436	ACGTGTCCCGGGAAGACA	60.522	61.111	28.84	18.07	41.84	3.41
3618	3993	2.284699	AGCCTAGGTTCCCTGCGT	60.285	61.111	11.31	0.00	34.61	5.24
3679	4054	4.446413	AACGACACCCGGCCGATC	62.446	66.667	30.73	17.08	43.93	3.69
3730	4114	3.515502	TCTCTATCTATTTCCATGCCCGG	59.484	47.826	0.00	0.00	0.00	5.73
3731	4115	4.499183	GTCTCTATCTATTTCCATGCCCG	58.501	47.826	0.00	0.00	0.00	6.13
3732	4116	4.323868	GGGTCTCTATCTATTTCCATGCCC	60.324	50.000	0.00	0.00	0.00	5.36
3733	4117	4.534103	AGGGTCTCTATCTATTTCCATGCC	59.466	45.833	0.00	0.00	0.00	4.40
3741	4125	3.253677	CGACGCAAGGGTCTCTATCTATT	59.746	47.826	14.15	0.00	46.39	1.73
3751	4139	3.712881	GCACACGACGCAAGGGTC	61.713	66.667	7.16	7.16	46.39	4.46
3753	4141	3.716006	CAGCACACGACGCAAGGG	61.716	66.667	0.00	0.00	46.39	3.95
3754	4142	3.716006	CCAGCACACGACGCAAGG	61.716	66.667	0.00	0.00	46.39	3.61
3766	4170	2.434843	CCTATCCGCCACTCCAGCA	61.435	63.158	0.00	0.00	0.00	4.41
3788	4192	1.303888	TCGAGTTAGGCCTGTCCGT	60.304	57.895	17.99	0.00	40.77	4.69
3900	4318	6.873605	GGGAGAAAGAAGAGAAAGAAAGAGAG	59.126	42.308	0.00	0.00	0.00	3.20
3914	4332	1.901650	GCGCACACGGGAGAAAGAAG	61.902	60.000	0.30	0.00	40.57	2.85
3941	4366	2.292845	GCTACTTGCTACTACTACCGGG	59.707	54.545	6.32	0.00	38.95	5.73
3952	4377	2.037121	TCACTGCTGTTGCTACTTGCTA	59.963	45.455	14.61	4.66	43.37	3.49
3957	4382	4.022849	GGATTTTTCACTGCTGTTGCTACT	60.023	41.667	0.00	0.00	40.48	2.57
3958	4383	4.022849	AGGATTTTTCACTGCTGTTGCTAC	60.023	41.667	0.00	0.00	40.48	3.58
3959	4384	4.144297	AGGATTTTTCACTGCTGTTGCTA	58.856	39.130	0.00	0.00	40.48	3.49
3960	4385	2.961062	AGGATTTTTCACTGCTGTTGCT	59.039	40.909	0.00	0.00	40.48	3.91
3961	4386	3.311966	GAGGATTTTTCACTGCTGTTGC	58.688	45.455	0.00	0.00	40.20	4.17
3962	4387	3.318839	TGGAGGATTTTTCACTGCTGTTG	59.681	43.478	0.00	0.00	0.00	3.33
3963	4388	3.319122	GTGGAGGATTTTTCACTGCTGTT	59.681	43.478	0.00	0.00	0.00	3.16
3964	4389	2.887152	GTGGAGGATTTTTCACTGCTGT	59.113	45.455	0.00	0.00	0.00	4.40
3965	4390	3.152341	AGTGGAGGATTTTTCACTGCTG	58.848	45.455	0.00	0.00	38.80	4.41
3966	4391	3.515602	AGTGGAGGATTTTTCACTGCT	57.484	42.857	0.00	0.00	38.80	4.24
3967	4392	4.327680	AGTAGTGGAGGATTTTTCACTGC	58.672	43.478	0.00	0.00	40.24	4.40
3968	4393	4.627467	CGAGTAGTGGAGGATTTTTCACTG	59.373	45.833	0.00	0.00	40.24	3.66
3969	4394	4.283722	ACGAGTAGTGGAGGATTTTTCACT	59.716	41.667	0.00	0.00	42.32	3.41
3970	4395	4.389077	CACGAGTAGTGGAGGATTTTTCAC	59.611	45.833	0.00	0.00	46.77	3.18
3971	4396	4.566004	CACGAGTAGTGGAGGATTTTTCA	58.434	43.478	0.00	0.00	46.77	2.69
4052	4477	0.532640	CCATGATTCATCGGCGACCA	60.533	55.000	13.76	5.97	0.00	4.02
4053	4478	1.845809	GCCATGATTCATCGGCGACC	61.846	60.000	13.76	0.00	32.09	4.79
4054	4479	1.571460	GCCATGATTCATCGGCGAC	59.429	57.895	13.76	0.00	32.09	5.19
4073	4498	1.819632	CCCATGTAGCGTCAAGGCC	60.820	63.158	0.00	0.00	0.00	5.19
4082	4507	0.947244	CAAATCCGAGCCCATGTAGC	59.053	55.000	0.00	0.00	0.00	3.58
4083	4508	2.213499	GTCAAATCCGAGCCCATGTAG	58.787	52.381	0.00	0.00	0.00	2.74
4084	4509	1.472552	CGTCAAATCCGAGCCCATGTA	60.473	52.381	0.00	0.00	0.00	2.29
4085	4510	0.744414	CGTCAAATCCGAGCCCATGT	60.744	55.000	0.00	0.00	0.00	3.21
4086	4511	0.744414	ACGTCAAATCCGAGCCCATG	60.744	55.000	0.00	0.00	0.00	3.66
4087	4512	0.744414	CACGTCAAATCCGAGCCCAT	60.744	55.000	0.00	0.00	0.00	4.00
4089	4514	0.462047	ATCACGTCAAATCCGAGCCC	60.462	55.000	0.00	0.00	0.00	5.19
4090	4515	2.218953	TATCACGTCAAATCCGAGCC	57.781	50.000	0.00	0.00	0.00	4.70
4091	4516	2.927477	TGTTATCACGTCAAATCCGAGC	59.073	45.455	0.00	0.00	0.00	5.03
4092	4517	4.500703	GTGTTATCACGTCAAATCCGAG	57.499	45.455	0.00	0.00	34.79	4.63
4104	4529	2.030401	TGCGTGCCCGTGTTATCAC	61.030	57.895	0.00	0.00	40.79	3.06
4105	4530	2.030401	GTGCGTGCCCGTGTTATCA	61.030	57.895	0.00	0.00	36.15	2.15
4106	4531	2.782615	GTGCGTGCCCGTGTTATC	59.217	61.111	0.00	0.00	36.15	1.75
4107	4532	3.115892	CGTGCGTGCCCGTGTTAT	61.116	61.111	0.00	0.00	36.15	1.89
4112	4537	4.605634	TTAACCGTGCGTGCCCGT	62.606	61.111	0.00	0.00	36.15	5.28
4113	4538	3.784412	CTTAACCGTGCGTGCCCG	61.784	66.667	0.00	0.00	37.07	6.13
4115	4540	2.508755	GAAGCTTAACCGTGCGTGCC	62.509	60.000	0.00	0.00	0.00	5.01
4116	4541	1.154469	GAAGCTTAACCGTGCGTGC	60.154	57.895	0.00	0.00	0.00	5.34
4117	4542	1.129809	CGAAGCTTAACCGTGCGTG	59.870	57.895	0.00	0.00	0.00	5.34
4118	4543	2.025418	CCGAAGCTTAACCGTGCGT	61.025	57.895	0.00	0.00	0.00	5.24
4119	4544	2.776072	CCGAAGCTTAACCGTGCG	59.224	61.111	0.00	0.00	0.00	5.34
4121	4546	0.953960	AAGGCCGAAGCTTAACCGTG	60.954	55.000	0.00	0.00	39.73	4.94
4122	4547	0.250597	AAAGGCCGAAGCTTAACCGT	60.251	50.000	0.00	0.00	39.73	4.83
4123	4548	1.664151	CTAAAGGCCGAAGCTTAACCG	59.336	52.381	0.00	0.00	39.73	4.44
4126	4551	1.338389	ACGCTAAAGGCCGAAGCTTAA	60.338	47.619	20.17	0.00	39.73	1.85
4127	4552	0.248289	ACGCTAAAGGCCGAAGCTTA	59.752	50.000	20.17	5.21	39.73	3.09
4129	4554	1.448013	GACGCTAAAGGCCGAAGCT	60.448	57.895	20.17	10.51	39.73	3.74
4130	4555	2.799540	CGACGCTAAAGGCCGAAGC	61.800	63.158	14.80	14.80	37.74	3.86
4131	4556	2.165301	CCGACGCTAAAGGCCGAAG	61.165	63.158	0.00	0.00	37.74	3.79
4132	4557	2.125832	CCGACGCTAAAGGCCGAA	60.126	61.111	0.00	0.00	37.74	4.30
4133	4558	2.552585	CTTCCGACGCTAAAGGCCGA	62.553	60.000	0.00	0.00	37.74	5.54
4135	4560	1.814169	CCTTCCGACGCTAAAGGCC	60.814	63.158	0.00	0.00	37.74	5.19
4137	4562	2.470821	CATACCTTCCGACGCTAAAGG	58.529	52.381	15.99	15.99	44.23	3.11
4138	4563	2.159142	ACCATACCTTCCGACGCTAAAG	60.159	50.000	0.00	0.00	0.00	1.85
4139	4564	1.826720	ACCATACCTTCCGACGCTAAA	59.173	47.619	0.00	0.00	0.00	1.85
4140	4565	1.135527	CACCATACCTTCCGACGCTAA	59.864	52.381	0.00	0.00	0.00	3.09
4142	4567	1.515954	CACCATACCTTCCGACGCT	59.484	57.895	0.00	0.00	0.00	5.07
4143	4568	1.520787	CCACCATACCTTCCGACGC	60.521	63.158	0.00	0.00	0.00	5.19
4144	4569	0.459585	CACCACCATACCTTCCGACG	60.460	60.000	0.00	0.00	0.00	5.12
4145	4570	0.743345	GCACCACCATACCTTCCGAC	60.743	60.000	0.00	0.00	0.00	4.79
4147	4572	1.451387	GGCACCACCATACCTTCCG	60.451	63.158	0.00	0.00	38.86	4.30
4158	4583	2.187599	GAACACAGCGATGGCACCAC	62.188	60.000	5.32	0.00	43.41	4.16
4159	4584	1.965930	GAACACAGCGATGGCACCA	60.966	57.895	5.32	0.00	43.41	4.17
4160	4585	1.308069	ATGAACACAGCGATGGCACC	61.308	55.000	5.32	0.00	43.41	5.01
4161	4586	0.523072	AATGAACACAGCGATGGCAC	59.477	50.000	5.32	0.00	43.41	5.01
4162	4587	0.804364	GAATGAACACAGCGATGGCA	59.196	50.000	5.32	0.00	43.41	4.92
4163	4588	1.089920	AGAATGAACACAGCGATGGC	58.910	50.000	5.32	0.00	40.37	4.40
4164	4589	3.525537	AGTAGAATGAACACAGCGATGG	58.474	45.455	5.32	0.00	0.00	3.51
4165	4590	5.102313	TGTAGTAGAATGAACACAGCGATG	58.898	41.667	0.00	0.00	0.00	3.84
4167	4592	4.776795	TGTAGTAGAATGAACACAGCGA	57.223	40.909	0.00	0.00	0.00	4.93
4168	4593	6.266323	AGTATGTAGTAGAATGAACACAGCG	58.734	40.000	0.00	0.00	0.00	5.18
4169	4594	7.376336	CGTAGTATGTAGTAGAATGAACACAGC	59.624	40.741	0.00	0.00	0.00	4.40
4170	4595	7.856398	CCGTAGTATGTAGTAGAATGAACACAG	59.144	40.741	0.00	0.00	0.00	3.66
4171	4596	7.553760	TCCGTAGTATGTAGTAGAATGAACACA	59.446	37.037	0.00	0.00	0.00	3.72
4172	4597	7.923888	TCCGTAGTATGTAGTAGAATGAACAC	58.076	38.462	0.00	0.00	0.00	3.32
4173	4598	8.510243	TTCCGTAGTATGTAGTAGAATGAACA	57.490	34.615	0.00	0.00	0.00	3.18
4176	4601	6.769341	TGCTTCCGTAGTATGTAGTAGAATGA	59.231	38.462	0.00	0.00	0.00	2.57
4178	4603	7.762588	ATGCTTCCGTAGTATGTAGTAGAAT	57.237	36.000	0.00	0.00	0.00	2.40
4182	4607	8.294577	CACATAATGCTTCCGTAGTATGTAGTA	58.705	37.037	3.89	0.00	0.00	1.82
4183	4608	7.145985	CACATAATGCTTCCGTAGTATGTAGT	58.854	38.462	3.89	0.00	0.00	2.73
4184	4609	7.568267	CACATAATGCTTCCGTAGTATGTAG	57.432	40.000	3.89	0.00	0.00	2.74
4199	4624	2.900960	ACGTCACGTCGCACATAATGC	61.901	52.381	0.00	0.00	41.52	3.56
4200	4625	0.989164	ACGTCACGTCGCACATAATG	59.011	50.000	0.00	0.00	33.69	1.90
4201	4626	1.265568	GACGTCACGTCGCACATAAT	58.734	50.000	15.86	0.00	46.56	1.28
4203	4628	4.445573	GACGTCACGTCGCACATA	57.554	55.556	15.86	0.00	46.56	2.29
4284	4762	1.302993	GCCACTTGCCGAGGGTTTA	60.303	57.895	0.00	0.00	0.00	2.01
4285	4763	2.597510	GCCACTTGCCGAGGGTTT	60.598	61.111	0.00	0.00	0.00	3.27
4327	4974	1.680314	GCCTTGGCCTCTTCCCTTG	60.680	63.158	3.32	0.00	0.00	3.61
4376	5023	1.809567	CTTTTGGCTGTGTCCTGGCC	61.810	60.000	0.00	0.00	45.45	5.36
4381	5028	1.515521	CGACCCTTTTGGCTGTGTCC	61.516	60.000	0.00	0.00	37.83	4.02
4386	5033	3.373565	GCCCGACCCTTTTGGCTG	61.374	66.667	0.00	0.00	40.77	4.85
4484	5133	0.110104	CCTGGATGGAATCTGGAGGC	59.890	60.000	0.00	0.00	44.71	4.70
4485	5134	0.110104	GCCTGGATGGAATCTGGAGG	59.890	60.000	0.00	0.00	44.71	4.30
4502	5158	0.606673	GAGTGGTGGAGGTTTGAGCC	60.607	60.000	0.00	0.00	0.00	4.70
4503	5159	0.606673	GGAGTGGTGGAGGTTTGAGC	60.607	60.000	0.00	0.00	0.00	4.26
4504	5160	0.764890	TGGAGTGGTGGAGGTTTGAG	59.235	55.000	0.00	0.00	0.00	3.02
4505	5161	0.764890	CTGGAGTGGTGGAGGTTTGA	59.235	55.000	0.00	0.00	0.00	2.69
4506	5162	0.890996	GCTGGAGTGGTGGAGGTTTG	60.891	60.000	0.00	0.00	0.00	2.93
4507	5163	1.456287	GCTGGAGTGGTGGAGGTTT	59.544	57.895	0.00	0.00	0.00	3.27
4508	5164	2.529744	GGCTGGAGTGGTGGAGGTT	61.530	63.158	0.00	0.00	0.00	3.50
4509	5165	2.930562	GGCTGGAGTGGTGGAGGT	60.931	66.667	0.00	0.00	0.00	3.85
4552	5212	4.547367	CACGAGGGAATCCGGGCC	62.547	72.222	0.00	0.00	38.33	5.80
4575	5235	2.367202	TGGAGGGAGGCGATGGAAC	61.367	63.158	0.00	0.00	0.00	3.62
4597	5259	2.013483	CGACGATGCTCGGATCTGC	61.013	63.158	9.75	0.00	45.59	4.26
4604	5266	4.175489	ACCCGACGACGATGCTCG	62.175	66.667	9.28	0.00	46.93	5.03
4716	5393	0.818296	GATAGATATGCTCCCGGCGT	59.182	55.000	6.01	0.00	45.43	5.68
4718	5395	1.137872	CCAGATAGATATGCTCCCGGC	59.862	57.143	0.00	0.00	42.22	6.13
4722	5399	1.480137	AGCGCCAGATAGATATGCTCC	59.520	52.381	2.29	0.00	0.00	4.70
4787	5464	1.272816	TGGGTACTAGGTACAGCAGCA	60.273	52.381	9.56	0.00	40.41	4.41
4813	5490	1.609783	CAGGGGAACTGGGATGGAC	59.390	63.158	0.00	0.00	43.70	4.02
4861	5562	2.328099	GGTGCCGCTGAAGAACCAG	61.328	63.158	0.00	0.00	37.23	4.00
4946	5647	1.956170	GCTCGTACATGGCCATCCG	60.956	63.158	17.61	18.10	34.14	4.18
4984	5685	2.832661	TGCTGGTGTTGGTGGTGC	60.833	61.111	0.00	0.00	0.00	5.01
5114	5848	1.956629	AATCTGTCGCGTACCCCTGG	61.957	60.000	5.77	0.00	0.00	4.45
5137	5871	4.219999	GAGGAGGAGCCAGCGAGC	62.220	72.222	0.00	0.00	40.02	5.03
5152	5891	0.514691	GAAAGCGTGAACCAGCTGAG	59.485	55.000	17.39	8.04	43.78	3.35
5153	5892	0.106708	AGAAAGCGTGAACCAGCTGA	59.893	50.000	17.39	0.00	43.78	4.26
5155	5894	0.394565	AGAGAAAGCGTGAACCAGCT	59.605	50.000	0.00	0.00	46.97	4.24
5166	5905	5.703130	ACACCAAAATGAGTAGAGAGAAAGC	59.297	40.000	0.00	0.00	0.00	3.51
5264	6021	4.589908	AGCGATTGATGGTTACCTTTTCT	58.410	39.130	2.07	0.00	0.00	2.52
5319	6076	5.123979	CCCAGCACATTTAAGGAAGACTAAC	59.876	44.000	0.00	0.00	0.00	2.34
5322	6082	3.690460	CCCAGCACATTTAAGGAAGACT	58.310	45.455	0.00	0.00	0.00	3.24
5420	6188	2.887152	GCAACAGTGTCATTTCCCTCTT	59.113	45.455	0.00	0.00	0.00	2.85
5560	6331	4.097741	CCATGGCTTCCGATGTTCAAAATA	59.902	41.667	0.00	0.00	0.00	1.40
5563	6334	1.818060	CCATGGCTTCCGATGTTCAAA	59.182	47.619	0.00	0.00	0.00	2.69
5587	6392	2.156504	CAGTGAGTCGCTGTTGTGAATC	59.843	50.000	22.98	0.00	44.86	2.52
5588	6393	2.138320	CAGTGAGTCGCTGTTGTGAAT	58.862	47.619	22.98	0.00	37.23	2.57
5590	6395	0.744281	TCAGTGAGTCGCTGTTGTGA	59.256	50.000	28.22	10.49	41.99	3.58
5591	6396	0.855349	GTCAGTGAGTCGCTGTTGTG	59.145	55.000	28.22	8.36	41.99	3.33
5592	6397	0.595053	CGTCAGTGAGTCGCTGTTGT	60.595	55.000	28.22	0.00	41.99	3.32
5593	6398	2.136649	CGTCAGTGAGTCGCTGTTG	58.863	57.895	28.22	19.39	41.99	3.33
5594	6399	4.635925	CGTCAGTGAGTCGCTGTT	57.364	55.556	28.22	0.00	41.99	3.16
5599	6404	0.667487	ACAATGGCGTCAGTGAGTCG	60.667	55.000	25.69	0.00	41.02	4.18
5604	6412	0.661187	GCACAACAATGGCGTCAGTG	60.661	55.000	16.92	16.92	43.76	3.66
5863	6694	1.289066	CTCCGTGTTCCGCTTCTGA	59.711	57.895	0.00	0.00	34.38	3.27
5873	6704	4.379243	CCGCAGCTCCTCCGTGTT	62.379	66.667	0.00	0.00	0.00	3.32
6104	6935	4.287720	CGATCATCTTTCCGACGATAACA	58.712	43.478	0.00	0.00	0.00	2.41
6105	6936	3.119792	GCGATCATCTTTCCGACGATAAC	59.880	47.826	0.00	0.00	0.00	1.89
6107	6938	2.351447	GGCGATCATCTTTCCGACGATA	60.351	50.000	0.00	0.00	0.00	2.92
6108	6939	1.603172	GGCGATCATCTTTCCGACGAT	60.603	52.381	0.00	0.00	0.00	3.73
6110	6941	1.540607	CGGCGATCATCTTTCCGACG	61.541	60.000	0.00	0.00	46.95	5.12
6118	6977	2.223735	ACGATAACAACGGCGATCATCT	60.224	45.455	16.62	0.00	34.93	2.90
6358	7246	0.980231	AGGCCCTTGAGCTTCTCGAT	60.980	55.000	0.00	0.00	32.35	3.59
6454	7364	2.415168	CACGACGACAATGCCATAAGTT	59.585	45.455	0.00	0.00	0.00	2.66
6460	7370	2.358125	CCCACGACGACAATGCCA	60.358	61.111	0.00	0.00	0.00	4.92
6461	7371	2.358247	ACCCACGACGACAATGCC	60.358	61.111	0.00	0.00	0.00	4.40
6502	7420	0.390866	CATGTTCTGCAGCGTCTCCT	60.391	55.000	9.47	0.00	0.00	3.69
6625	7543	2.482142	GCTTAGCTTATGGCAGACTCGT	60.482	50.000	0.00	0.00	44.79	4.18
6632	7550	1.065199	AGCACAGCTTAGCTTATGGCA	60.065	47.619	3.00	0.00	38.64	4.92
6779	7706	1.622725	GCCTACCTCTTCCTCCCTTCA	60.623	57.143	0.00	0.00	0.00	3.02
6780	7707	1.124780	GCCTACCTCTTCCTCCCTTC	58.875	60.000	0.00	0.00	0.00	3.46
6787	7714	3.536570	GTTCTGAATGCCTACCTCTTCC	58.463	50.000	0.00	0.00	0.00	3.46
6835	7768	2.139917	CCGTCATCGTCTGGAAAACAA	58.860	47.619	0.00	0.00	35.01	2.83
6854	7787	3.390311	ACCTGATCGACCTTAATTACCCC	59.610	47.826	0.00	0.00	0.00	4.95
6935	7896	3.282021	AGCAATTTCATCGCTACACCAT	58.718	40.909	0.00	0.00	33.25	3.55
6936	7897	2.710377	AGCAATTTCATCGCTACACCA	58.290	42.857	0.00	0.00	33.25	4.17
6937	7898	6.423905	TCTTATAGCAATTTCATCGCTACACC	59.576	38.462	0.00	0.00	40.81	4.16
6973	7935	2.285834	CGGATCACAAGCGCTACAATTC	60.286	50.000	12.05	5.65	0.00	2.17
6986	7948	6.850752	ACACATGATATATACCGGATCACA	57.149	37.500	9.46	0.00	32.62	3.58
7038	8000	6.377327	AGCAAAACATTTCCTCCATATACG	57.623	37.500	0.00	0.00	0.00	3.06
7072	8034	3.688272	CGCAATACTTGGAGCAAATCTG	58.312	45.455	0.00	0.00	0.00	2.90
7083	8045	3.313249	TGGATTCAGATGCGCAATACTTG	59.687	43.478	17.11	8.89	0.00	3.16
7093	8055	4.649692	AGGTGATACATGGATTCAGATGC	58.350	43.478	0.00	0.00	0.00	3.91
7099	8061	3.111853	TGCGAGGTGATACATGGATTC	57.888	47.619	0.00	0.00	0.00	2.52
7121	10260	4.102681	AGGTACCTTCAAGTAACACAAGCT	59.897	41.667	9.21	0.00	32.01	3.74
7171	10310	3.765257	ATCCGGCCCAGAGGAGAGG	62.765	68.421	0.00	0.00	40.26	3.69
7184	10323	2.292828	AATGCCCTTATTGGATCCGG	57.707	50.000	7.39	0.00	38.35	5.14
7212	10351	4.390264	GCCTCTAATCAGTTATTGGGGAC	58.610	47.826	0.00	0.00	27.93	4.46
7226	10365	4.259356	GAGTAAAAACCCACGCCTCTAAT	58.741	43.478	0.00	0.00	0.00	1.73
7239	10378	4.539870	GTGCCGGTTAAAGGAGTAAAAAC	58.460	43.478	1.90	0.00	0.00	2.43
7268	10413	1.071471	CTAGCGCCGATTGGGGATT	59.929	57.895	20.08	9.16	45.69	3.01
7334	10484	2.104281	ACTTTTTACTCAGCCACCGAGT	59.896	45.455	0.00	0.00	45.53	4.18
7368	10518	3.393106	TGGAGCGCATGAGGCAGA	61.393	61.111	11.47	0.00	45.17	4.26
7392	10556	4.015406	ACCGGCGAAGATGTGGCA	62.015	61.111	9.30	0.00	31.34	4.92
7396	10560	2.126071	CGACACCGGCGAAGATGT	60.126	61.111	9.30	7.15	0.00	3.06
7409	10573	2.682494	GTAGTGGGAGGGGCGACA	60.682	66.667	0.00	0.00	0.00	4.35
7424	10602	2.682494	GGACCACAGCGGAGGGTA	60.682	66.667	5.21	0.00	38.63	3.69
7425	10603	4.640690	AGGACCACAGCGGAGGGT	62.641	66.667	5.21	5.03	38.63	4.34
7568	10752	0.249120	CTGTGCAATCAGGTACCCGA	59.751	55.000	8.74	3.72	0.00	5.14
7577	10761	2.747460	GCCGAGGCTGTGCAATCA	60.747	61.111	6.90	0.00	38.26	2.57
7642	10826	4.315122	CGCCGACGGGAGAGATCG	62.315	72.222	17.22	4.63	34.61	3.69
7711	10895	4.057428	GGTGAGCCGACGAGCTGT	62.057	66.667	14.30	0.00	45.15	4.40
7736	10920	2.095213	GGCAATCGTCGCACTTTATGAA	59.905	45.455	0.00	0.00	0.00	2.57
7783	10967	1.147600	GGGATATTCCGGCGTGGTT	59.852	57.895	6.01	0.00	37.43	3.67
7832	11017	9.912634	AACCTAATGAAAAGAAACACATACATG	57.087	29.630	0.00	0.00	0.00	3.21
7833	11018	9.912634	CAACCTAATGAAAAGAAACACATACAT	57.087	29.630	0.00	0.00	0.00	2.29
7834	11019	8.908903	ACAACCTAATGAAAAGAAACACATACA	58.091	29.630	0.00	0.00	0.00	2.29
7873	11059	0.960364	AATGAGCCACCGAAATGCGT	60.960	50.000	0.00	0.00	38.67	5.24
7885	11072	4.860907	CACAAATTAGAGCAACAATGAGCC	59.139	41.667	0.00	0.00	0.00	4.70
7968	11156	4.531332	GCACGAGCATCTATCAATTTTCC	58.469	43.478	0.00	0.00	41.58	3.13
8001	11189	7.504238	TCTGGTCTCATCTCTAGTCTTTATTCC	59.496	40.741	0.00	0.00	0.00	3.01
8050	11243	4.104738	ACACTTCTTTCTTCCTGGATTCCA	59.895	41.667	5.05	5.05	0.00	3.53
8057	11250	3.251972	GCTTCCACACTTCTTTCTTCCTG	59.748	47.826	0.00	0.00	0.00	3.86
8083	11278	7.063426	TGTCTTTATTGTTGATCTGTAGCTTCG	59.937	37.037	0.00	0.00	0.00	3.79

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.