Multiple sequence alignment - TraesCS2A01G525100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G525100 chr2A 100.000 2907 0 0 1 2907 745528233 745531139 0.000000e+00 5369.0
1 TraesCS2A01G525100 chr2A 86.517 623 74 3 488 1107 745428092 745428707 0.000000e+00 676.0
2 TraesCS2A01G525100 chr2A 87.432 549 55 8 569 1112 745426095 745426634 1.140000e-173 619.0
3 TraesCS2A01G525100 chr2A 92.701 274 19 1 1 274 146796911 146796639 7.550000e-106 394.0
4 TraesCS2A01G525100 chr2A 95.238 147 7 0 2733 2879 95211737 95211591 1.740000e-57 233.0
5 TraesCS2A01G525100 chr2A 96.078 51 2 0 2670 2720 651090435 651090385 1.860000e-12 84.2
6 TraesCS2A01G525100 chr2B 89.286 1624 111 20 432 2018 749922202 749923799 0.000000e+00 1977.0
7 TraesCS2A01G525100 chr2B 85.895 631 75 8 487 1112 749888232 749888853 0.000000e+00 660.0
8 TraesCS2A01G525100 chr2B 85.185 648 89 3 488 1135 749892616 749893256 0.000000e+00 658.0
9 TraesCS2A01G525100 chr2B 84.203 671 97 4 471 1140 749985792 749986454 0.000000e+00 643.0
10 TraesCS2A01G525100 chr2B 93.258 267 18 0 1 267 134472963 134472697 7.550000e-106 394.0
11 TraesCS2A01G525100 chr2D 86.975 952 95 12 1242 2174 615504133 615505074 0.000000e+00 1044.0
12 TraesCS2A01G525100 chr2D 88.315 813 58 5 342 1150 615503134 615503913 0.000000e+00 941.0
13 TraesCS2A01G525100 chr2D 78.273 1436 245 32 471 1879 615510210 615511605 0.000000e+00 861.0
14 TraesCS2A01G525100 chr2D 86.287 649 79 3 490 1135 615469217 615469858 0.000000e+00 697.0
15 TraesCS2A01G525100 chr2D 86.709 632 70 7 486 1112 615466577 615467199 0.000000e+00 689.0
16 TraesCS2A01G525100 chr2D 85.015 674 89 5 480 1151 615567831 615568494 0.000000e+00 675.0
17 TraesCS2A01G525100 chr2D 81.016 669 104 11 483 1140 621984568 621985224 7.190000e-141 510.0
18 TraesCS2A01G525100 chr2D 82.778 540 68 12 1350 1885 621996568 621997086 2.640000e-125 459.0
19 TraesCS2A01G525100 chr2D 92.937 269 19 0 1 269 8417864 8417596 2.720000e-105 392.0
20 TraesCS2A01G525100 chr2D 90.753 292 26 1 2219 2510 615507269 615507559 3.510000e-104 388.0
21 TraesCS2A01G525100 chr2D 91.447 152 13 0 2720 2871 640684448 640684599 2.940000e-50 209.0
22 TraesCS2A01G525100 chr2D 92.086 139 11 0 2733 2871 7651220 7651358 2.290000e-46 196.0
23 TraesCS2A01G525100 chr2D 91.129 124 11 0 2487 2610 615507575 615507698 4.980000e-38 169.0
24 TraesCS2A01G525100 chr2D 84.416 154 18 3 2726 2873 601739557 601739404 2.330000e-31 147.0
25 TraesCS2A01G525100 chr2D 94.444 54 3 0 2667 2720 529854461 529854514 1.860000e-12 84.2
26 TraesCS2A01G525100 chr7A 93.431 274 17 1 1 274 14508058 14507786 3.490000e-109 405.0
27 TraesCS2A01G525100 chr7A 93.258 267 18 0 1 267 726392305 726392571 7.550000e-106 394.0
28 TraesCS2A01G525100 chr7A 92.884 267 19 0 1 267 427556793 427556527 3.510000e-104 388.0
29 TraesCS2A01G525100 chr7A 95.683 139 6 0 2733 2871 721067001 721066863 1.050000e-54 224.0
30 TraesCS2A01G525100 chr7A 92.208 154 11 1 2722 2874 623427578 623427425 1.750000e-52 217.0
31 TraesCS2A01G525100 chr5A 93.633 267 17 0 1 267 618474392 618474658 1.620000e-107 399.0
32 TraesCS2A01G525100 chr4B 93.633 267 17 0 1 267 161619762 161619496 1.620000e-107 399.0
33 TraesCS2A01G525100 chr4B 97.561 41 1 0 2866 2906 3457522 3457562 1.450000e-08 71.3
34 TraesCS2A01G525100 chr4B 97.561 41 1 0 2866 2906 3517611 3517651 1.450000e-08 71.3
35 TraesCS2A01G525100 chr4A 92.565 269 20 0 1 269 468240650 468240918 1.260000e-103 387.0
36 TraesCS2A01G525100 chr6A 98.561 139 2 0 2733 2871 234145061 234145199 2.240000e-61 246.0
37 TraesCS2A01G525100 chr3D 90.361 166 15 1 2714 2879 51112478 51112642 1.750000e-52 217.0
38 TraesCS2A01G525100 chr3D 80.263 152 29 1 2720 2871 615246303 615246153 2.370000e-21 113.0
39 TraesCS2A01G525100 chr3D 98.246 57 1 0 2664 2720 523846161 523846217 1.840000e-17 100.0
40 TraesCS2A01G525100 chrUn 90.066 151 14 1 2722 2872 307092877 307092728 8.220000e-46 195.0
41 TraesCS2A01G525100 chrUn 88.158 152 17 1 2720 2871 87770253 87770103 2.300000e-41 180.0
42 TraesCS2A01G525100 chrUn 100.000 37 0 0 2870 2906 8108718 8108754 5.200000e-08 69.4
43 TraesCS2A01G525100 chrUn 100.000 37 0 0 2870 2906 48071729 48071693 5.200000e-08 69.4
44 TraesCS2A01G525100 chr7B 89.677 155 9 3 2722 2871 711175072 711174920 1.060000e-44 191.0
45 TraesCS2A01G525100 chr5D 88.806 134 5 3 2722 2845 556865887 556865754 3.880000e-34 156.0
46 TraesCS2A01G525100 chr5D 94.737 57 3 0 2665 2721 486823394 486823338 3.990000e-14 89.8
47 TraesCS2A01G525100 chr5D 100.000 37 0 0 2870 2906 267658654 267658690 5.200000e-08 69.4
48 TraesCS2A01G525100 chr3A 98.305 59 1 0 2664 2722 658756648 658756706 1.420000e-18 104.0
49 TraesCS2A01G525100 chr5B 96.610 59 2 0 2664 2722 571623626 571623568 6.630000e-17 99.0
50 TraesCS2A01G525100 chr1D 98.148 54 1 0 2667 2720 147882096 147882043 8.580000e-16 95.3
51 TraesCS2A01G525100 chr1A 92.982 57 4 0 2664 2720 132411958 132412014 1.860000e-12 84.2
52 TraesCS2A01G525100 chr1A 94.444 54 3 0 2667 2720 314485938 314485885 1.860000e-12 84.2
53 TraesCS2A01G525100 chr7D 100.000 37 0 0 2870 2906 364107538 364107574 5.200000e-08 69.4
54 TraesCS2A01G525100 chr7D 100.000 37 0 0 2870 2906 634141082 634141118 5.200000e-08 69.4
55 TraesCS2A01G525100 chr6D 100.000 37 0 0 2870 2906 16690848 16690812 5.200000e-08 69.4
56 TraesCS2A01G525100 chr4D 100.000 37 0 0 2870 2906 483585933 483585969 5.200000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G525100 chr2A 745528233 745531139 2906 False 5369.0 5369 100.0000 1 2907 1 chr2A.!!$F1 2906
1 TraesCS2A01G525100 chr2A 745426095 745428707 2612 False 647.5 676 86.9745 488 1112 2 chr2A.!!$F2 624
2 TraesCS2A01G525100 chr2B 749922202 749923799 1597 False 1977.0 1977 89.2860 432 2018 1 chr2B.!!$F1 1586
3 TraesCS2A01G525100 chr2B 749888232 749893256 5024 False 659.0 660 85.5400 487 1135 2 chr2B.!!$F3 648
4 TraesCS2A01G525100 chr2B 749985792 749986454 662 False 643.0 643 84.2030 471 1140 1 chr2B.!!$F2 669
5 TraesCS2A01G525100 chr2D 615466577 615469858 3281 False 693.0 697 86.4980 486 1135 2 chr2D.!!$F7 649
6 TraesCS2A01G525100 chr2D 615503134 615511605 8471 False 680.6 1044 87.0890 342 2610 5 chr2D.!!$F8 2268
7 TraesCS2A01G525100 chr2D 615567831 615568494 663 False 675.0 675 85.0150 480 1151 1 chr2D.!!$F3 671
8 TraesCS2A01G525100 chr2D 621984568 621985224 656 False 510.0 510 81.0160 483 1140 1 chr2D.!!$F4 657
9 TraesCS2A01G525100 chr2D 621996568 621997086 518 False 459.0 459 82.7780 1350 1885 1 chr2D.!!$F5 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 451 0.033601 TCCTCACTCCTCAGCTCCTC 60.034 60.0 0.0 0.0 0.0 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2406 8170 0.179124 GACTGGCTCGGAGATGTCAC 60.179 60.0 9.69 0.0 33.89 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 9.665719 TTTGCATGTAAACTAGATATGACAAGA 57.334 29.630 4.71 0.00 0.00 3.02
61 62 9.665719 TTGCATGTAAACTAGATATGACAAGAA 57.334 29.630 0.00 0.00 0.00 2.52
62 63 9.665719 TGCATGTAAACTAGATATGACAAGAAA 57.334 29.630 0.00 0.00 0.00 2.52
70 71 9.950496 AACTAGATATGACAAGAAAACATGTCT 57.050 29.630 0.00 0.00 44.86 3.41
74 75 9.725019 AGATATGACAAGAAAACATGTCTACAA 57.275 29.630 0.00 0.00 44.86 2.41
77 78 6.969366 TGACAAGAAAACATGTCTACAATGG 58.031 36.000 0.00 0.00 44.86 3.16
78 79 6.016360 TGACAAGAAAACATGTCTACAATGGG 60.016 38.462 0.00 0.00 44.86 4.00
79 80 5.833131 ACAAGAAAACATGTCTACAATGGGT 59.167 36.000 0.00 0.00 0.00 4.51
80 81 6.016276 ACAAGAAAACATGTCTACAATGGGTC 60.016 38.462 0.00 0.00 0.00 4.46
81 82 5.630121 AGAAAACATGTCTACAATGGGTCA 58.370 37.500 0.00 0.00 0.00 4.02
82 83 6.248433 AGAAAACATGTCTACAATGGGTCAT 58.752 36.000 0.00 0.00 0.00 3.06
83 84 6.375455 AGAAAACATGTCTACAATGGGTCATC 59.625 38.462 0.00 0.00 0.00 2.92
84 85 5.441718 AACATGTCTACAATGGGTCATCT 57.558 39.130 0.00 0.00 0.00 2.90
85 86 5.441718 ACATGTCTACAATGGGTCATCTT 57.558 39.130 0.00 0.00 0.00 2.40
86 87 5.819991 ACATGTCTACAATGGGTCATCTTT 58.180 37.500 0.00 0.00 0.00 2.52
87 88 6.248433 ACATGTCTACAATGGGTCATCTTTT 58.752 36.000 0.00 0.00 0.00 2.27
88 89 7.402054 ACATGTCTACAATGGGTCATCTTTTA 58.598 34.615 0.00 0.00 0.00 1.52
89 90 7.554118 ACATGTCTACAATGGGTCATCTTTTAG 59.446 37.037 0.00 0.00 0.00 1.85
90 91 6.414732 TGTCTACAATGGGTCATCTTTTAGG 58.585 40.000 0.00 0.00 0.00 2.69
91 92 5.297029 GTCTACAATGGGTCATCTTTTAGGC 59.703 44.000 0.00 0.00 0.00 3.93
92 93 4.322057 ACAATGGGTCATCTTTTAGGCT 57.678 40.909 0.00 0.00 0.00 4.58
93 94 4.677182 ACAATGGGTCATCTTTTAGGCTT 58.323 39.130 0.00 0.00 0.00 4.35
94 95 5.826643 ACAATGGGTCATCTTTTAGGCTTA 58.173 37.500 0.00 0.00 0.00 3.09
95 96 6.435164 ACAATGGGTCATCTTTTAGGCTTAT 58.565 36.000 0.00 0.00 0.00 1.73
96 97 6.547510 ACAATGGGTCATCTTTTAGGCTTATC 59.452 38.462 0.00 0.00 0.00 1.75
97 98 5.975988 TGGGTCATCTTTTAGGCTTATCT 57.024 39.130 0.00 0.00 0.00 1.98
98 99 6.327386 TGGGTCATCTTTTAGGCTTATCTT 57.673 37.500 0.00 0.00 0.00 2.40
99 100 6.357367 TGGGTCATCTTTTAGGCTTATCTTC 58.643 40.000 0.00 0.00 0.00 2.87
100 101 6.069673 TGGGTCATCTTTTAGGCTTATCTTCA 60.070 38.462 0.00 0.00 0.00 3.02
101 102 6.828785 GGGTCATCTTTTAGGCTTATCTTCAA 59.171 38.462 0.00 0.00 0.00 2.69
102 103 7.503902 GGGTCATCTTTTAGGCTTATCTTCAAT 59.496 37.037 0.00 0.00 0.00 2.57
103 104 9.561069 GGTCATCTTTTAGGCTTATCTTCAATA 57.439 33.333 0.00 0.00 0.00 1.90
133 134 8.877864 ATTGTTCCTAAAAATATGGTGAGACA 57.122 30.769 0.00 0.00 0.00 3.41
134 135 8.698973 TTGTTCCTAAAAATATGGTGAGACAA 57.301 30.769 0.00 0.00 0.00 3.18
135 136 8.698973 TGTTCCTAAAAATATGGTGAGACAAA 57.301 30.769 0.00 0.00 0.00 2.83
136 137 9.308000 TGTTCCTAAAAATATGGTGAGACAAAT 57.692 29.630 0.00 0.00 0.00 2.32
139 140 9.308000 TCCTAAAAATATGGTGAGACAAATTGT 57.692 29.630 0.00 0.00 0.00 2.71
140 141 9.357652 CCTAAAAATATGGTGAGACAAATTGTG 57.642 33.333 2.20 0.00 0.00 3.33
141 142 7.656707 AAAAATATGGTGAGACAAATTGTGC 57.343 32.000 2.20 0.00 0.00 4.57
142 143 6.594788 AAATATGGTGAGACAAATTGTGCT 57.405 33.333 2.20 0.36 0.00 4.40
143 144 7.701539 AAATATGGTGAGACAAATTGTGCTA 57.298 32.000 2.20 0.00 0.00 3.49
144 145 7.701539 AATATGGTGAGACAAATTGTGCTAA 57.298 32.000 2.20 0.00 0.00 3.09
145 146 5.633830 ATGGTGAGACAAATTGTGCTAAG 57.366 39.130 2.20 0.00 0.00 2.18
146 147 4.713553 TGGTGAGACAAATTGTGCTAAGA 58.286 39.130 2.20 0.00 0.00 2.10
147 148 4.756642 TGGTGAGACAAATTGTGCTAAGAG 59.243 41.667 2.20 0.00 0.00 2.85
148 149 4.997395 GGTGAGACAAATTGTGCTAAGAGA 59.003 41.667 2.20 0.00 0.00 3.10
149 150 5.645497 GGTGAGACAAATTGTGCTAAGAGAT 59.355 40.000 2.20 0.00 0.00 2.75
150 151 6.183360 GGTGAGACAAATTGTGCTAAGAGATC 60.183 42.308 2.20 0.00 0.00 2.75
151 152 6.369890 GTGAGACAAATTGTGCTAAGAGATCA 59.630 38.462 2.20 0.00 0.00 2.92
152 153 7.065563 GTGAGACAAATTGTGCTAAGAGATCAT 59.934 37.037 2.20 0.00 0.00 2.45
153 154 7.279536 TGAGACAAATTGTGCTAAGAGATCATC 59.720 37.037 2.20 0.00 0.00 2.92
154 155 7.337167 AGACAAATTGTGCTAAGAGATCATCT 58.663 34.615 2.20 0.00 41.27 2.90
156 157 8.345724 ACAAATTGTGCTAAGAGATCATCTTT 57.654 30.769 0.00 0.00 46.49 2.52
157 158 8.800332 ACAAATTGTGCTAAGAGATCATCTTTT 58.200 29.630 0.00 0.00 46.49 2.27
158 159 9.073368 CAAATTGTGCTAAGAGATCATCTTTTG 57.927 33.333 11.16 0.00 46.49 2.44
159 160 7.934855 ATTGTGCTAAGAGATCATCTTTTGT 57.065 32.000 11.16 0.00 46.49 2.83
160 161 6.974932 TGTGCTAAGAGATCATCTTTTGTC 57.025 37.500 11.16 0.00 46.49 3.18
161 162 6.705302 TGTGCTAAGAGATCATCTTTTGTCT 58.295 36.000 11.16 0.00 46.49 3.41
162 163 7.164122 TGTGCTAAGAGATCATCTTTTGTCTT 58.836 34.615 11.16 4.38 46.49 3.01
163 164 7.332926 TGTGCTAAGAGATCATCTTTTGTCTTC 59.667 37.037 11.16 0.00 46.49 2.87
164 165 7.548780 GTGCTAAGAGATCATCTTTTGTCTTCT 59.451 37.037 11.16 0.00 46.49 2.85
165 166 7.763528 TGCTAAGAGATCATCTTTTGTCTTCTC 59.236 37.037 11.16 0.00 46.49 2.87
166 167 7.981225 GCTAAGAGATCATCTTTTGTCTTCTCT 59.019 37.037 11.16 0.00 46.49 3.10
167 168 9.874205 CTAAGAGATCATCTTTTGTCTTCTCTT 57.126 33.333 14.51 14.51 46.49 2.85
208 209 9.665719 AAGTCTTCTCTTATGATTTTTCTCTCC 57.334 33.333 0.00 0.00 0.00 3.71
209 210 9.045745 AGTCTTCTCTTATGATTTTTCTCTCCT 57.954 33.333 0.00 0.00 0.00 3.69
210 211 9.313118 GTCTTCTCTTATGATTTTTCTCTCCTC 57.687 37.037 0.00 0.00 0.00 3.71
211 212 8.482128 TCTTCTCTTATGATTTTTCTCTCCTCC 58.518 37.037 0.00 0.00 0.00 4.30
212 213 7.739995 TCTCTTATGATTTTTCTCTCCTCCA 57.260 36.000 0.00 0.00 0.00 3.86
213 214 8.329346 TCTCTTATGATTTTTCTCTCCTCCAT 57.671 34.615 0.00 0.00 0.00 3.41
214 215 8.428063 TCTCTTATGATTTTTCTCTCCTCCATC 58.572 37.037 0.00 0.00 0.00 3.51
215 216 8.329346 TCTTATGATTTTTCTCTCCTCCATCT 57.671 34.615 0.00 0.00 0.00 2.90
216 217 8.428063 TCTTATGATTTTTCTCTCCTCCATCTC 58.572 37.037 0.00 0.00 0.00 2.75
217 218 6.572182 ATGATTTTTCTCTCCTCCATCTCA 57.428 37.500 0.00 0.00 0.00 3.27
218 219 6.572182 TGATTTTTCTCTCCTCCATCTCAT 57.428 37.500 0.00 0.00 0.00 2.90
219 220 6.590068 TGATTTTTCTCTCCTCCATCTCATC 58.410 40.000 0.00 0.00 0.00 2.92
220 221 6.157471 TGATTTTTCTCTCCTCCATCTCATCA 59.843 38.462 0.00 0.00 0.00 3.07
221 222 6.572182 TTTTTCTCTCCTCCATCTCATCAT 57.428 37.500 0.00 0.00 0.00 2.45
222 223 6.572182 TTTTCTCTCCTCCATCTCATCATT 57.428 37.500 0.00 0.00 0.00 2.57
223 224 6.572182 TTTCTCTCCTCCATCTCATCATTT 57.428 37.500 0.00 0.00 0.00 2.32
224 225 7.681259 TTTCTCTCCTCCATCTCATCATTTA 57.319 36.000 0.00 0.00 0.00 1.40
225 226 7.868792 TTCTCTCCTCCATCTCATCATTTAT 57.131 36.000 0.00 0.00 0.00 1.40
226 227 7.868792 TCTCTCCTCCATCTCATCATTTATT 57.131 36.000 0.00 0.00 0.00 1.40
227 228 8.272659 TCTCTCCTCCATCTCATCATTTATTT 57.727 34.615 0.00 0.00 0.00 1.40
228 229 8.721479 TCTCTCCTCCATCTCATCATTTATTTT 58.279 33.333 0.00 0.00 0.00 1.82
230 231 9.784531 TCTCCTCCATCTCATCATTTATTTTAC 57.215 33.333 0.00 0.00 0.00 2.01
231 232 8.607441 TCCTCCATCTCATCATTTATTTTACG 57.393 34.615 0.00 0.00 0.00 3.18
232 233 8.210946 TCCTCCATCTCATCATTTATTTTACGT 58.789 33.333 0.00 0.00 0.00 3.57
233 234 8.285394 CCTCCATCTCATCATTTATTTTACGTG 58.715 37.037 0.00 0.00 0.00 4.49
234 235 8.153479 TCCATCTCATCATTTATTTTACGTGG 57.847 34.615 0.00 0.00 0.00 4.94
235 236 7.990314 TCCATCTCATCATTTATTTTACGTGGA 59.010 33.333 0.00 0.00 0.00 4.02
236 237 8.620416 CCATCTCATCATTTATTTTACGTGGAA 58.380 33.333 0.00 0.00 0.00 3.53
237 238 9.438291 CATCTCATCATTTATTTTACGTGGAAC 57.562 33.333 0.00 0.00 0.00 3.62
238 239 8.786826 TCTCATCATTTATTTTACGTGGAACT 57.213 30.769 0.00 0.00 31.75 3.01
239 240 8.879759 TCTCATCATTTATTTTACGTGGAACTC 58.120 33.333 0.00 0.00 31.75 3.01
240 241 8.786826 TCATCATTTATTTTACGTGGAACTCT 57.213 30.769 0.00 0.00 31.75 3.24
241 242 9.226606 TCATCATTTATTTTACGTGGAACTCTT 57.773 29.630 0.00 0.00 31.75 2.85
269 270 9.672673 AGATATAATCATTGTACATGCCCTTAC 57.327 33.333 0.00 0.00 0.00 2.34
270 271 6.801539 ATAATCATTGTACATGCCCTTACG 57.198 37.500 0.00 0.00 0.00 3.18
271 272 3.620427 TCATTGTACATGCCCTTACGT 57.380 42.857 0.00 0.00 0.00 3.57
272 273 4.739587 TCATTGTACATGCCCTTACGTA 57.260 40.909 0.00 0.00 0.00 3.57
273 274 4.689071 TCATTGTACATGCCCTTACGTAG 58.311 43.478 0.00 0.00 0.00 3.51
274 275 3.530265 TTGTACATGCCCTTACGTAGG 57.470 47.619 0.00 0.00 44.33 3.18
275 276 2.459644 TGTACATGCCCTTACGTAGGT 58.540 47.619 3.84 0.00 43.07 3.08
276 277 2.166870 TGTACATGCCCTTACGTAGGTG 59.833 50.000 3.84 0.00 43.07 4.00
277 278 1.272807 ACATGCCCTTACGTAGGTGT 58.727 50.000 3.84 0.00 43.07 4.16
278 279 2.459644 ACATGCCCTTACGTAGGTGTA 58.540 47.619 3.84 0.00 43.07 2.90
279 280 2.429610 ACATGCCCTTACGTAGGTGTAG 59.570 50.000 3.84 0.00 43.07 2.74
280 281 1.477553 TGCCCTTACGTAGGTGTAGG 58.522 55.000 3.84 3.73 43.07 3.18
281 282 1.005805 TGCCCTTACGTAGGTGTAGGA 59.994 52.381 11.13 0.00 43.07 2.94
282 283 2.314246 GCCCTTACGTAGGTGTAGGAT 58.686 52.381 11.13 0.00 43.07 3.24
283 284 2.697229 GCCCTTACGTAGGTGTAGGATT 59.303 50.000 11.13 0.00 43.07 3.01
284 285 3.891366 GCCCTTACGTAGGTGTAGGATTA 59.109 47.826 11.13 0.00 43.07 1.75
285 286 4.525874 GCCCTTACGTAGGTGTAGGATTAT 59.474 45.833 11.13 0.00 43.07 1.28
286 287 5.011431 GCCCTTACGTAGGTGTAGGATTATT 59.989 44.000 11.13 0.00 43.07 1.40
287 288 6.685657 CCCTTACGTAGGTGTAGGATTATTC 58.314 44.000 11.13 0.00 43.07 1.75
288 289 6.266103 CCCTTACGTAGGTGTAGGATTATTCA 59.734 42.308 11.13 0.00 43.07 2.57
289 290 7.201938 CCCTTACGTAGGTGTAGGATTATTCAA 60.202 40.741 11.13 0.00 43.07 2.69
290 291 8.365647 CCTTACGTAGGTGTAGGATTATTCAAT 58.634 37.037 4.51 0.00 39.39 2.57
291 292 9.760077 CTTACGTAGGTGTAGGATTATTCAATT 57.240 33.333 0.00 0.00 0.00 2.32
292 293 9.537192 TTACGTAGGTGTAGGATTATTCAATTG 57.463 33.333 0.00 0.00 0.00 2.32
293 294 6.482308 ACGTAGGTGTAGGATTATTCAATTGC 59.518 38.462 0.00 0.00 0.00 3.56
294 295 6.706270 CGTAGGTGTAGGATTATTCAATTGCT 59.294 38.462 0.00 0.00 0.00 3.91
295 296 6.949352 AGGTGTAGGATTATTCAATTGCTG 57.051 37.500 0.00 0.00 0.00 4.41
296 297 5.300286 AGGTGTAGGATTATTCAATTGCTGC 59.700 40.000 0.00 0.00 0.00 5.25
297 298 5.300286 GGTGTAGGATTATTCAATTGCTGCT 59.700 40.000 0.00 0.00 0.00 4.24
298 299 6.486657 GGTGTAGGATTATTCAATTGCTGCTA 59.513 38.462 0.00 0.00 0.00 3.49
299 300 7.175641 GGTGTAGGATTATTCAATTGCTGCTAT 59.824 37.037 0.00 0.00 0.00 2.97
300 301 8.233190 GTGTAGGATTATTCAATTGCTGCTATC 58.767 37.037 0.00 0.43 0.00 2.08
301 302 7.938490 TGTAGGATTATTCAATTGCTGCTATCA 59.062 33.333 0.00 0.00 0.00 2.15
302 303 8.954350 GTAGGATTATTCAATTGCTGCTATCAT 58.046 33.333 0.00 1.01 0.00 2.45
303 304 8.053026 AGGATTATTCAATTGCTGCTATCATC 57.947 34.615 0.00 0.00 0.00 2.92
304 305 7.668469 AGGATTATTCAATTGCTGCTATCATCA 59.332 33.333 0.00 0.00 0.00 3.07
305 306 7.754027 GGATTATTCAATTGCTGCTATCATCAC 59.246 37.037 0.00 0.00 0.00 3.06
306 307 7.571080 TTATTCAATTGCTGCTATCATCACA 57.429 32.000 0.00 0.00 0.00 3.58
307 308 5.494632 TTCAATTGCTGCTATCATCACAG 57.505 39.130 0.00 0.00 34.48 3.66
308 309 3.881089 TCAATTGCTGCTATCATCACAGG 59.119 43.478 0.00 0.00 31.94 4.00
309 310 3.572632 ATTGCTGCTATCATCACAGGT 57.427 42.857 0.00 0.00 31.94 4.00
310 311 2.609427 TGCTGCTATCATCACAGGTC 57.391 50.000 0.00 0.00 31.94 3.85
311 312 1.139654 TGCTGCTATCATCACAGGTCC 59.860 52.381 0.00 0.00 31.94 4.46
312 313 1.139654 GCTGCTATCATCACAGGTCCA 59.860 52.381 0.00 0.00 31.94 4.02
313 314 2.806019 GCTGCTATCATCACAGGTCCAG 60.806 54.545 0.00 0.00 31.94 3.86
314 315 2.697229 CTGCTATCATCACAGGTCCAGA 59.303 50.000 0.00 0.00 0.00 3.86
315 316 3.106827 TGCTATCATCACAGGTCCAGAA 58.893 45.455 0.00 0.00 0.00 3.02
316 317 3.713248 TGCTATCATCACAGGTCCAGAAT 59.287 43.478 0.00 0.00 0.00 2.40
317 318 4.164796 TGCTATCATCACAGGTCCAGAATT 59.835 41.667 0.00 0.00 0.00 2.17
318 319 5.366477 TGCTATCATCACAGGTCCAGAATTA 59.634 40.000 0.00 0.00 0.00 1.40
319 320 5.931146 GCTATCATCACAGGTCCAGAATTAG 59.069 44.000 0.00 0.00 0.00 1.73
320 321 5.965033 ATCATCACAGGTCCAGAATTAGT 57.035 39.130 0.00 0.00 0.00 2.24
321 322 5.762179 TCATCACAGGTCCAGAATTAGTT 57.238 39.130 0.00 0.00 0.00 2.24
322 323 5.491070 TCATCACAGGTCCAGAATTAGTTG 58.509 41.667 0.00 0.00 0.00 3.16
323 324 3.674997 TCACAGGTCCAGAATTAGTTGC 58.325 45.455 0.00 0.00 0.00 4.17
324 325 2.749621 CACAGGTCCAGAATTAGTTGCC 59.250 50.000 0.00 0.00 0.00 4.52
325 326 2.644798 ACAGGTCCAGAATTAGTTGCCT 59.355 45.455 0.00 0.00 0.00 4.75
326 327 3.012518 CAGGTCCAGAATTAGTTGCCTG 58.987 50.000 0.00 0.00 36.68 4.85
327 328 2.644798 AGGTCCAGAATTAGTTGCCTGT 59.355 45.455 0.00 0.00 0.00 4.00
328 329 3.010420 GGTCCAGAATTAGTTGCCTGTC 58.990 50.000 0.00 0.00 0.00 3.51
329 330 3.010420 GTCCAGAATTAGTTGCCTGTCC 58.990 50.000 0.00 0.00 0.00 4.02
330 331 2.026262 TCCAGAATTAGTTGCCTGTCCC 60.026 50.000 0.00 0.00 0.00 4.46
331 332 2.369394 CAGAATTAGTTGCCTGTCCCC 58.631 52.381 0.00 0.00 0.00 4.81
332 333 1.285078 AGAATTAGTTGCCTGTCCCCC 59.715 52.381 0.00 0.00 0.00 5.40
333 334 1.005450 GAATTAGTTGCCTGTCCCCCA 59.995 52.381 0.00 0.00 0.00 4.96
334 335 1.308877 ATTAGTTGCCTGTCCCCCAT 58.691 50.000 0.00 0.00 0.00 4.00
335 336 1.974028 TTAGTTGCCTGTCCCCCATA 58.026 50.000 0.00 0.00 0.00 2.74
336 337 1.974028 TAGTTGCCTGTCCCCCATAA 58.026 50.000 0.00 0.00 0.00 1.90
337 338 1.308877 AGTTGCCTGTCCCCCATAAT 58.691 50.000 0.00 0.00 0.00 1.28
338 339 1.645919 AGTTGCCTGTCCCCCATAATT 59.354 47.619 0.00 0.00 0.00 1.40
339 340 1.756538 GTTGCCTGTCCCCCATAATTG 59.243 52.381 0.00 0.00 0.00 2.32
340 341 1.006813 TGCCTGTCCCCCATAATTGT 58.993 50.000 0.00 0.00 0.00 2.71
346 347 2.572556 TGTCCCCCATAATTGTACGTGT 59.427 45.455 0.00 0.00 0.00 4.49
354 355 6.053005 CCCATAATTGTACGTGTATCCTGTT 58.947 40.000 0.00 0.00 0.00 3.16
381 386 0.252197 GTTCACCGGCTTGGGAGTAT 59.748 55.000 0.00 0.00 44.64 2.12
384 389 0.828022 CACCGGCTTGGGAGTATACA 59.172 55.000 0.00 0.00 44.64 2.29
385 390 1.120530 ACCGGCTTGGGAGTATACAG 58.879 55.000 0.00 0.00 44.64 2.74
398 403 8.449423 TGGGAGTATACAGGAGCAAATATAAT 57.551 34.615 5.50 0.00 0.00 1.28
413 418 0.382873 ATAATAGACGCCGTGCACGA 59.617 50.000 39.10 19.57 43.02 4.35
446 451 0.033601 TCCTCACTCCTCAGCTCCTC 60.034 60.000 0.00 0.00 0.00 3.71
466 471 3.173151 TCTCATCCACTGGAACAAGCTA 58.827 45.455 0.66 0.00 38.70 3.32
467 472 3.196469 TCTCATCCACTGGAACAAGCTAG 59.804 47.826 0.66 0.00 38.70 3.42
481 490 2.477845 CTAGCGCTGCTTGCACAC 59.522 61.111 22.90 0.00 43.06 3.82
511 520 2.095213 TGTCGCCAGTGAAAATTATCGC 59.905 45.455 0.00 0.00 0.00 4.58
540 549 1.375268 GTCAGTGTGCCAGAGAGCC 60.375 63.158 0.00 0.00 0.00 4.70
660 675 3.656045 CGCCCTTTGACGCCGTTT 61.656 61.111 0.00 0.00 0.00 3.60
707 722 0.390340 CGACTCTAGGCAGCTTTGCA 60.390 55.000 0.00 0.00 36.33 4.08
794 809 2.355481 GGCGTCAGGTTCGTCGTT 60.355 61.111 0.00 0.00 0.00 3.85
929 944 4.683334 GTGCAGGCCACGCGTTTC 62.683 66.667 10.22 3.53 34.22 2.78
932 947 3.777925 CAGGCCACGCGTTTCGAG 61.778 66.667 10.22 0.00 41.67 4.04
1009 1024 1.670674 GGTCGCTGTGGATGTTCGTTA 60.671 52.381 0.00 0.00 0.00 3.18
1112 1127 2.739996 AAGATCTGGCCAGGAGCGG 61.740 63.158 32.23 7.03 45.17 5.52
1140 1155 2.278336 TTCGCGCCGAATCTACCG 60.278 61.111 0.00 0.00 41.05 4.02
1152 1167 3.000925 CGAATCTACCGTTGGTATGTTGC 59.999 47.826 0.00 0.00 37.56 4.17
1153 1168 2.389962 TCTACCGTTGGTATGTTGCC 57.610 50.000 0.00 0.00 37.56 4.52
1154 1169 1.624312 TCTACCGTTGGTATGTTGCCA 59.376 47.619 0.00 0.00 37.56 4.92
1169 1193 2.736192 GTTGCCATTTCAAATGTTCGGG 59.264 45.455 9.31 0.00 0.00 5.14
1172 1196 2.879826 CCATTTCAAATGTTCGGGCTC 58.120 47.619 9.31 0.00 0.00 4.70
1174 1198 3.504863 CATTTCAAATGTTCGGGCTCTG 58.495 45.455 1.53 0.00 0.00 3.35
1175 1199 0.881118 TTCAAATGTTCGGGCTCTGC 59.119 50.000 0.00 0.00 0.00 4.26
1178 1202 1.135575 CAAATGTTCGGGCTCTGCTTC 60.136 52.381 0.00 0.00 0.00 3.86
1180 1204 0.392193 ATGTTCGGGCTCTGCTTCAG 60.392 55.000 0.00 0.00 0.00 3.02
1182 1206 0.246635 GTTCGGGCTCTGCTTCAGTA 59.753 55.000 0.00 0.00 32.61 2.74
1269 3121 1.614903 TCGTACGTTCACCTTGGATGT 59.385 47.619 16.05 0.00 0.00 3.06
1309 3558 2.161486 GCAGCACATCGTCCGTCTC 61.161 63.158 0.00 0.00 0.00 3.36
1429 3681 0.450583 CGTTCATCTCGGACGAGGAA 59.549 55.000 20.17 13.86 42.20 3.36
1448 3706 0.461693 AGAAGCGCTGCTCATCTTCC 60.462 55.000 13.74 0.00 38.25 3.46
1453 3711 1.143620 GCTGCTCATCTTCCTCGCT 59.856 57.895 0.00 0.00 0.00 4.93
1654 3927 3.414700 CAGACGTCGTTGCTGGCC 61.415 66.667 10.46 0.00 0.00 5.36
1680 3953 0.319728 CCTATGGACCGGCTGATGAG 59.680 60.000 0.00 0.00 0.00 2.90
2072 5678 2.869897 GAGTCTGTTCTCGGTAGCTTG 58.130 52.381 0.00 0.00 0.00 4.01
2080 5686 2.819595 CGGTAGCTTGCGCACCAT 60.820 61.111 11.12 0.04 37.25 3.55
2089 5695 0.959867 TTGCGCACCATGCTATGTGT 60.960 50.000 11.12 0.00 42.25 3.72
2096 5702 2.620115 CACCATGCTATGTGTTCCATCC 59.380 50.000 0.00 0.00 34.86 3.51
2106 5712 1.144057 GTTCCATCCGATGAGGCGT 59.856 57.895 10.12 0.00 40.77 5.68
2107 5713 0.462047 GTTCCATCCGATGAGGCGTT 60.462 55.000 10.12 0.00 40.77 4.84
2108 5714 1.116308 TTCCATCCGATGAGGCGTTA 58.884 50.000 10.12 0.00 40.77 3.18
2109 5715 0.387929 TCCATCCGATGAGGCGTTAC 59.612 55.000 10.12 0.00 40.77 2.50
2110 5716 0.600255 CCATCCGATGAGGCGTTACC 60.600 60.000 10.12 0.00 40.77 2.85
2164 5779 0.170561 CTACTCCACCCTTGTCGTCG 59.829 60.000 0.00 0.00 0.00 5.12
2165 5780 1.246056 TACTCCACCCTTGTCGTCGG 61.246 60.000 0.00 0.00 0.00 4.79
2166 5781 2.522436 TCCACCCTTGTCGTCGGT 60.522 61.111 0.00 0.00 0.00 4.69
2167 5782 2.357034 CCACCCTTGTCGTCGGTG 60.357 66.667 0.00 0.00 45.53 4.94
2168 5783 3.041940 CACCCTTGTCGTCGGTGC 61.042 66.667 0.00 0.00 40.59 5.01
2170 5785 2.030562 CCCTTGTCGTCGGTGCTT 59.969 61.111 0.00 0.00 0.00 3.91
2172 5787 2.027625 CCTTGTCGTCGGTGCTTCC 61.028 63.158 0.00 0.00 0.00 3.46
2174 5789 1.284982 CTTGTCGTCGGTGCTTCCAG 61.285 60.000 0.00 0.00 35.57 3.86
2196 6089 1.486726 GGCTGCACCCTAATCTACTGT 59.513 52.381 0.50 0.00 0.00 3.55
2214 6107 3.428282 GGCACAAACTACGGCCGG 61.428 66.667 31.76 15.62 36.58 6.13
2234 7998 0.744874 TCTTCATCCTTCTACGGCGG 59.255 55.000 13.24 0.00 0.00 6.13
2236 8000 2.622903 TTCATCCTTCTACGGCGGCG 62.623 60.000 31.06 31.06 0.00 6.46
2268 8032 2.969238 GCCATGGAGGTCGCATCG 60.969 66.667 18.40 0.00 40.61 3.84
2301 8065 2.941583 ACCCCCTTCTCTTGCCCC 60.942 66.667 0.00 0.00 0.00 5.80
2305 8069 2.592993 CCCTTCTCTTGCCCCGACA 61.593 63.158 0.00 0.00 0.00 4.35
2306 8070 1.604378 CCTTCTCTTGCCCCGACAT 59.396 57.895 0.00 0.00 0.00 3.06
2318 8082 2.169789 CCGACATGGCGCAAGAGAG 61.170 63.158 17.71 0.00 43.02 3.20
2334 8098 1.204941 GAGAGACACGGTGCTATGGTT 59.795 52.381 8.30 0.00 0.00 3.67
2336 8100 0.673644 AGACACGGTGCTATGGTTGC 60.674 55.000 8.30 0.00 0.00 4.17
2349 8113 2.480555 GTTGCCATTGACGCCGAG 59.519 61.111 0.00 0.00 0.00 4.63
2350 8114 2.745884 TTGCCATTGACGCCGAGG 60.746 61.111 0.00 0.00 0.00 4.63
2361 8125 2.841988 GCCGAGGAGATGGGAGCT 60.842 66.667 0.00 0.00 0.00 4.09
2362 8126 3.136750 CCGAGGAGATGGGAGCTG 58.863 66.667 0.00 0.00 0.00 4.24
2390 8154 2.827190 ATGCATGCGGACTGCTGG 60.827 61.111 14.09 0.56 46.63 4.85
2391 8155 3.633609 ATGCATGCGGACTGCTGGT 62.634 57.895 14.09 0.00 46.63 4.00
2392 8156 3.503363 GCATGCGGACTGCTGGTC 61.503 66.667 0.00 0.00 46.63 4.02
2393 8157 3.190849 CATGCGGACTGCTGGTCG 61.191 66.667 7.96 0.00 45.35 4.79
2406 8170 3.827898 GGTCGCCTCGGTCTCCAG 61.828 72.222 0.00 0.00 0.00 3.86
2409 8173 3.062466 CGCCTCGGTCTCCAGTGA 61.062 66.667 0.00 0.00 0.00 3.41
2474 8238 4.740334 GCATGATGTCCTCTCTTCTCTTCC 60.740 50.000 0.00 0.00 0.00 3.46
2496 8260 4.207165 CCCTTTTCTTTCAAGTCCAGTCA 58.793 43.478 0.00 0.00 0.00 3.41
2510 8274 5.240891 AGTCCAGTCATACTTGTGATGTTG 58.759 41.667 0.00 0.00 0.00 3.33
2512 8276 4.996758 TCCAGTCATACTTGTGATGTTGTG 59.003 41.667 0.00 0.00 0.00 3.33
2514 8278 5.106948 CCAGTCATACTTGTGATGTTGTGTC 60.107 44.000 0.00 0.00 0.00 3.67
2515 8279 4.686091 AGTCATACTTGTGATGTTGTGTCG 59.314 41.667 0.00 0.00 0.00 4.35
2516 8280 4.684242 GTCATACTTGTGATGTTGTGTCGA 59.316 41.667 0.00 0.00 0.00 4.20
2517 8281 4.923281 TCATACTTGTGATGTTGTGTCGAG 59.077 41.667 0.00 0.00 0.00 4.04
2518 8282 1.867233 ACTTGTGATGTTGTGTCGAGC 59.133 47.619 0.00 0.00 0.00 5.03
2533 8336 0.508641 CGAGCAGTTCAGTTCCAACG 59.491 55.000 0.00 0.00 0.00 4.10
2534 8337 0.868406 GAGCAGTTCAGTTCCAACGG 59.132 55.000 0.00 0.00 0.00 4.44
2562 8365 4.769488 TGATGCTAGTCACCCTCTGATATC 59.231 45.833 0.00 0.00 0.00 1.63
2594 8397 3.492421 ACAAATCATTTGCTACGGCTG 57.508 42.857 10.21 0.00 44.39 4.85
2598 8401 0.744414 TCATTTGCTACGGCTGGAGC 60.744 55.000 23.81 23.81 39.59 4.70
2606 8409 0.970640 TACGGCTGGAGCAACTTGTA 59.029 50.000 0.00 0.00 44.36 2.41
2616 9565 3.118223 GGAGCAACTTGTATCCCTTAGCT 60.118 47.826 0.00 0.00 0.00 3.32
2627 9576 1.204704 TCCCTTAGCTCGTGTGTCATG 59.795 52.381 0.00 0.00 0.00 3.07
2630 9579 3.368013 CCCTTAGCTCGTGTGTCATGTTA 60.368 47.826 0.00 0.00 0.00 2.41
2636 9589 3.120649 GCTCGTGTGTCATGTTAACCTTC 60.121 47.826 2.48 0.00 0.00 3.46
2638 9591 4.699637 TCGTGTGTCATGTTAACCTTCTT 58.300 39.130 2.48 0.00 0.00 2.52
2640 9593 5.587043 TCGTGTGTCATGTTAACCTTCTTTT 59.413 36.000 2.48 0.00 0.00 2.27
2642 9595 6.457663 CGTGTGTCATGTTAACCTTCTTTTCA 60.458 38.462 2.48 0.00 0.00 2.69
2647 9600 8.474025 TGTCATGTTAACCTTCTTTTCAACATT 58.526 29.630 2.48 0.00 35.12 2.71
2652 9605 9.364989 TGTTAACCTTCTTTTCAACATTCAAAG 57.635 29.630 2.48 0.00 0.00 2.77
2680 11474 1.128692 GAGAATCGTTGTTCAAGGCGG 59.871 52.381 1.09 0.00 0.00 6.13
2685 11479 1.711060 CGTTGTTCAAGGCGGTGTGT 61.711 55.000 0.00 0.00 0.00 3.72
2687 11481 1.877443 GTTGTTCAAGGCGGTGTGTAT 59.123 47.619 0.00 0.00 0.00 2.29
2690 11484 1.196808 GTTCAAGGCGGTGTGTATGTG 59.803 52.381 0.00 0.00 0.00 3.21
2691 11485 0.321210 TCAAGGCGGTGTGTATGTGG 60.321 55.000 0.00 0.00 0.00 4.17
2692 11486 0.605319 CAAGGCGGTGTGTATGTGGT 60.605 55.000 0.00 0.00 0.00 4.16
2694 11488 0.605319 AGGCGGTGTGTATGTGGTTG 60.605 55.000 0.00 0.00 0.00 3.77
2698 11492 1.165270 GGTGTGTATGTGGTTGGAGC 58.835 55.000 0.00 0.00 0.00 4.70
2699 11493 0.796312 GTGTGTATGTGGTTGGAGCG 59.204 55.000 0.00 0.00 0.00 5.03
2701 11495 1.024579 GTGTATGTGGTTGGAGCGGG 61.025 60.000 0.00 0.00 0.00 6.13
2702 11496 1.298667 GTATGTGGTTGGAGCGGGT 59.701 57.895 0.00 0.00 0.00 5.28
2708 11502 4.966787 GTTGGAGCGGGTGGCCAA 62.967 66.667 7.24 0.00 45.17 4.52
2715 11509 3.966543 CGGGTGGCCAAGGAGGTT 61.967 66.667 7.24 0.00 40.61 3.50
2716 11510 2.526110 GGGTGGCCAAGGAGGTTT 59.474 61.111 7.24 0.00 40.61 3.27
2717 11511 1.152333 GGGTGGCCAAGGAGGTTTT 60.152 57.895 7.24 0.00 40.61 2.43
2718 11512 0.762842 GGGTGGCCAAGGAGGTTTTT 60.763 55.000 7.24 0.00 40.61 1.94
2719 11513 1.481615 GGGTGGCCAAGGAGGTTTTTA 60.482 52.381 7.24 0.00 40.61 1.52
2720 11514 2.536066 GGTGGCCAAGGAGGTTTTTAT 58.464 47.619 7.24 0.00 40.61 1.40
2722 11516 3.161866 GTGGCCAAGGAGGTTTTTATCA 58.838 45.455 7.24 0.00 40.61 2.15
2723 11517 3.769300 GTGGCCAAGGAGGTTTTTATCAT 59.231 43.478 7.24 0.00 40.61 2.45
2724 11518 4.953579 GTGGCCAAGGAGGTTTTTATCATA 59.046 41.667 7.24 0.00 40.61 2.15
2725 11519 5.067805 GTGGCCAAGGAGGTTTTTATCATAG 59.932 44.000 7.24 0.00 40.61 2.23
2726 11520 5.201243 GGCCAAGGAGGTTTTTATCATAGT 58.799 41.667 0.00 0.00 40.61 2.12
2727 11521 5.656859 GGCCAAGGAGGTTTTTATCATAGTT 59.343 40.000 0.00 0.00 40.61 2.24
2728 11522 6.154534 GGCCAAGGAGGTTTTTATCATAGTTT 59.845 38.462 0.00 0.00 40.61 2.66
2729 11523 7.310423 GGCCAAGGAGGTTTTTATCATAGTTTT 60.310 37.037 0.00 0.00 40.61 2.43
2730 11524 8.745590 GCCAAGGAGGTTTTTATCATAGTTTTA 58.254 33.333 0.00 0.00 40.61 1.52
2741 11535 8.685838 TTTATCATAGTTTTAAATAGCCGGCT 57.314 30.769 34.85 34.85 0.00 5.52
2742 11536 9.781633 TTTATCATAGTTTTAAATAGCCGGCTA 57.218 29.630 36.88 36.88 0.00 3.93
2759 11603 3.978718 GCTATAGCCTTTTCAGCAAGG 57.021 47.619 14.13 0.00 45.70 3.61
2761 11605 3.065925 GCTATAGCCTTTTCAGCAAGGTG 59.934 47.826 14.13 0.00 44.84 4.00
2762 11606 1.247567 TAGCCTTTTCAGCAAGGTGC 58.752 50.000 2.79 0.00 44.84 5.01
2766 11610 1.799258 CTTTTCAGCAAGGTGCCGCT 61.799 55.000 0.00 0.00 46.52 5.52
2771 11615 0.179156 CAGCAAGGTGCCGCTAAATG 60.179 55.000 0.00 0.00 46.52 2.32
2772 11616 1.139520 GCAAGGTGCCGCTAAATGG 59.860 57.895 0.00 0.00 37.42 3.16
2773 11617 1.595093 GCAAGGTGCCGCTAAATGGT 61.595 55.000 0.00 0.00 37.42 3.55
2775 11619 1.024579 AAGGTGCCGCTAAATGGTCG 61.025 55.000 0.00 0.00 0.00 4.79
2776 11620 2.403586 GTGCCGCTAAATGGTCGC 59.596 61.111 0.00 0.00 0.00 5.19
2777 11621 2.822255 TGCCGCTAAATGGTCGCC 60.822 61.111 0.00 0.00 0.00 5.54
2778 11622 2.513897 GCCGCTAAATGGTCGCCT 60.514 61.111 0.00 0.00 0.00 5.52
2779 11623 2.112815 GCCGCTAAATGGTCGCCTT 61.113 57.895 0.00 0.00 0.00 4.35
2780 11624 2.014594 CCGCTAAATGGTCGCCTTC 58.985 57.895 0.00 0.00 0.00 3.46
2781 11625 0.742990 CCGCTAAATGGTCGCCTTCA 60.743 55.000 0.00 0.00 0.00 3.02
2782 11626 0.373716 CGCTAAATGGTCGCCTTCAC 59.626 55.000 0.00 0.00 0.00 3.18
2783 11627 1.448985 GCTAAATGGTCGCCTTCACA 58.551 50.000 0.00 0.00 0.00 3.58
2784 11628 1.810151 GCTAAATGGTCGCCTTCACAA 59.190 47.619 0.00 0.00 0.00 3.33
2785 11629 2.227865 GCTAAATGGTCGCCTTCACAAA 59.772 45.455 0.00 0.00 0.00 2.83
2787 11631 4.095782 GCTAAATGGTCGCCTTCACAAATA 59.904 41.667 0.00 0.00 0.00 1.40
2788 11632 4.701956 AAATGGTCGCCTTCACAAATAG 57.298 40.909 0.00 0.00 0.00 1.73
2790 11634 2.695359 TGGTCGCCTTCACAAATAGTC 58.305 47.619 0.00 0.00 0.00 2.59
2791 11635 2.007608 GGTCGCCTTCACAAATAGTCC 58.992 52.381 0.00 0.00 0.00 3.85
2792 11636 1.659098 GTCGCCTTCACAAATAGTCCG 59.341 52.381 0.00 0.00 0.00 4.79
2793 11637 0.373716 CGCCTTCACAAATAGTCCGC 59.626 55.000 0.00 0.00 0.00 5.54
2794 11638 1.739067 GCCTTCACAAATAGTCCGCT 58.261 50.000 0.00 0.00 0.00 5.52
2795 11639 2.084546 GCCTTCACAAATAGTCCGCTT 58.915 47.619 0.00 0.00 0.00 4.68
2796 11640 2.488153 GCCTTCACAAATAGTCCGCTTT 59.512 45.455 0.00 0.00 0.00 3.51
2797 11641 3.687698 GCCTTCACAAATAGTCCGCTTTA 59.312 43.478 0.00 0.00 0.00 1.85
2798 11642 4.201822 GCCTTCACAAATAGTCCGCTTTAG 60.202 45.833 0.00 0.00 0.00 1.85
2800 11644 3.267483 TCACAAATAGTCCGCTTTAGCC 58.733 45.455 0.00 0.00 37.91 3.93
2801 11645 2.354821 CACAAATAGTCCGCTTTAGCCC 59.645 50.000 0.00 0.00 37.91 5.19
2802 11646 1.597663 CAAATAGTCCGCTTTAGCCCG 59.402 52.381 0.00 0.00 37.91 6.13
2803 11647 0.532196 AATAGTCCGCTTTAGCCCGC 60.532 55.000 0.00 0.00 37.91 6.13
2805 11649 0.752743 TAGTCCGCTTTAGCCCGCTA 60.753 55.000 0.00 0.00 37.91 4.26
2806 11650 1.069258 GTCCGCTTTAGCCCGCTAT 59.931 57.895 0.00 0.00 37.91 2.97
2807 11651 0.316204 GTCCGCTTTAGCCCGCTATA 59.684 55.000 0.00 0.00 37.91 1.31
2808 11652 0.601558 TCCGCTTTAGCCCGCTATAG 59.398 55.000 9.14 9.14 37.91 1.31
2809 11653 1.014564 CCGCTTTAGCCCGCTATAGC 61.015 60.000 21.99 21.99 44.47 2.97
2810 11654 0.038159 CGCTTTAGCCCGCTATAGCT 60.038 55.000 26.12 6.31 45.17 3.32
2811 11655 1.715993 GCTTTAGCCCGCTATAGCTC 58.284 55.000 23.62 11.04 44.50 4.09
2812 11656 1.673329 GCTTTAGCCCGCTATAGCTCC 60.673 57.143 23.62 10.06 44.50 4.70
2813 11657 0.601558 TTTAGCCCGCTATAGCTCCG 59.398 55.000 21.98 10.15 40.56 4.63
2815 11659 2.766306 TAGCCCGCTATAGCTCCGCT 62.766 60.000 24.41 24.41 43.41 5.52
2816 11660 2.341101 GCCCGCTATAGCTCCGCTA 61.341 63.158 21.98 0.00 45.55 4.26
2830 11674 5.533482 AGCTCCGCTATAACTGATTTACAG 58.467 41.667 0.00 0.00 44.14 2.74
2831 11675 5.509840 AGCTCCGCTATAACTGATTTACAGG 60.510 44.000 0.00 0.00 43.42 4.00
2832 11676 8.893837 AGCTCCGCTATAACTGATTTACAGGC 62.894 46.154 0.00 0.00 43.42 4.85
2840 11684 4.109675 ATTTACAGGCCCGCCGCT 62.110 61.111 0.00 0.00 41.95 5.52
2841 11685 2.653953 GATTTACAGGCCCGCCGCTA 62.654 60.000 0.00 0.00 41.95 4.26
2844 11688 2.260088 TTACAGGCCCGCCGCTATTT 62.260 55.000 0.00 0.00 41.95 1.40
2845 11689 2.260088 TACAGGCCCGCCGCTATTTT 62.260 55.000 0.00 0.00 41.95 1.82
2846 11690 2.516225 AGGCCCGCCGCTATTTTC 60.516 61.111 0.00 0.00 41.95 2.29
2847 11691 3.592814 GGCCCGCCGCTATTTTCC 61.593 66.667 0.00 0.00 37.74 3.13
2848 11692 2.826738 GCCCGCCGCTATTTTCCA 60.827 61.111 0.00 0.00 0.00 3.53
2849 11693 2.193536 GCCCGCCGCTATTTTCCAT 61.194 57.895 0.00 0.00 0.00 3.41
2850 11694 0.887387 GCCCGCCGCTATTTTCCATA 60.887 55.000 0.00 0.00 0.00 2.74
2851 11695 1.156736 CCCGCCGCTATTTTCCATAG 58.843 55.000 0.00 0.00 0.00 2.23
2852 11696 0.517316 CCGCCGCTATTTTCCATAGC 59.483 55.000 4.08 4.08 42.53 2.97
2853 11697 0.517316 CGCCGCTATTTTCCATAGCC 59.483 55.000 8.01 0.00 42.89 3.93
2854 11698 0.881796 GCCGCTATTTTCCATAGCCC 59.118 55.000 8.01 0.00 42.89 5.19
2855 11699 1.156736 CCGCTATTTTCCATAGCCCG 58.843 55.000 8.01 0.00 42.89 6.13
2857 11701 1.878102 CGCTATTTTCCATAGCCCGCT 60.878 52.381 8.01 0.00 42.89 5.52
2858 11702 2.611971 CGCTATTTTCCATAGCCCGCTA 60.612 50.000 8.01 0.00 42.89 4.26
2859 11703 3.610911 GCTATTTTCCATAGCCCGCTAT 58.389 45.455 3.31 3.31 40.69 2.97
2860 11704 4.010349 GCTATTTTCCATAGCCCGCTATT 58.990 43.478 6.48 0.00 40.69 1.73
2861 11705 4.459337 GCTATTTTCCATAGCCCGCTATTT 59.541 41.667 6.48 0.00 40.69 1.40
2862 11706 5.646360 GCTATTTTCCATAGCCCGCTATTTA 59.354 40.000 6.48 0.00 40.69 1.40
2863 11707 6.150474 GCTATTTTCCATAGCCCGCTATTTAA 59.850 38.462 6.48 2.15 40.69 1.52
2864 11708 6.969993 ATTTTCCATAGCCCGCTATTTAAA 57.030 33.333 6.48 7.56 37.16 1.52
2865 11709 6.777213 TTTTCCATAGCCCGCTATTTAAAA 57.223 33.333 6.48 12.19 37.16 1.52
2866 11710 5.761165 TTCCATAGCCCGCTATTTAAAAC 57.239 39.130 6.48 0.00 37.16 2.43
2867 11711 4.783055 TCCATAGCCCGCTATTTAAAACA 58.217 39.130 6.48 0.00 37.16 2.83
2870 11714 5.920273 CCATAGCCCGCTATTTAAAACATTG 59.080 40.000 6.48 0.00 37.16 2.82
2872 11716 3.767131 AGCCCGCTATTTAAAACATTGGT 59.233 39.130 0.00 0.00 0.00 3.67
2873 11717 4.221924 AGCCCGCTATTTAAAACATTGGTT 59.778 37.500 0.00 0.00 39.43 3.67
2874 11718 7.364320 ATAGCCCGCTATTTAAAACATTGGTTT 60.364 33.333 4.86 4.86 41.14 3.27
2886 11730 6.934048 AAACATTGGTTTTTACCCAACATG 57.066 33.333 0.00 0.00 44.63 3.21
2887 11731 4.967036 ACATTGGTTTTTACCCAACATGG 58.033 39.130 0.00 0.00 44.36 3.66
2896 11740 2.601067 CCAACATGGGTGGCAGCA 60.601 61.111 19.48 5.16 32.67 4.41
2897 11741 1.985662 CCAACATGGGTGGCAGCAT 60.986 57.895 19.48 7.36 32.67 3.79
2899 11743 1.184431 CAACATGGGTGGCAGCATAA 58.816 50.000 19.48 3.65 0.00 1.90
2900 11744 1.758280 CAACATGGGTGGCAGCATAAT 59.242 47.619 19.48 6.00 0.00 1.28
2901 11745 1.696063 ACATGGGTGGCAGCATAATC 58.304 50.000 19.48 0.71 0.00 1.75
2904 11748 0.183492 TGGGTGGCAGCATAATCTCC 59.817 55.000 19.48 0.00 0.00 3.71
2905 11749 0.886490 GGGTGGCAGCATAATCTCCG 60.886 60.000 19.48 0.00 0.00 4.63
2906 11750 0.179045 GGTGGCAGCATAATCTCCGT 60.179 55.000 12.58 0.00 0.00 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.665719 TCTTGTCATATCTAGTTTACATGCAAA 57.334 29.630 0.00 0.00 0.00 3.68
35 36 9.665719 TTCTTGTCATATCTAGTTTACATGCAA 57.334 29.630 0.00 0.00 0.00 4.08
36 37 9.665719 TTTCTTGTCATATCTAGTTTACATGCA 57.334 29.630 0.00 0.00 0.00 3.96
55 56 5.833131 ACCCATTGTAGACATGTTTTCTTGT 59.167 36.000 0.00 0.00 40.19 3.16
56 57 6.016360 TGACCCATTGTAGACATGTTTTCTTG 60.016 38.462 0.00 0.00 0.00 3.02
57 58 6.068010 TGACCCATTGTAGACATGTTTTCTT 58.932 36.000 0.00 0.00 0.00 2.52
58 59 5.630121 TGACCCATTGTAGACATGTTTTCT 58.370 37.500 0.00 0.00 0.00 2.52
59 60 5.957842 TGACCCATTGTAGACATGTTTTC 57.042 39.130 0.00 0.00 0.00 2.29
60 61 6.248433 AGATGACCCATTGTAGACATGTTTT 58.752 36.000 0.00 0.00 0.00 2.43
61 62 5.819991 AGATGACCCATTGTAGACATGTTT 58.180 37.500 0.00 0.00 0.00 2.83
62 63 5.441718 AGATGACCCATTGTAGACATGTT 57.558 39.130 0.00 0.00 0.00 2.71
63 64 5.441718 AAGATGACCCATTGTAGACATGT 57.558 39.130 0.00 0.00 0.00 3.21
64 65 6.764308 AAAAGATGACCCATTGTAGACATG 57.236 37.500 0.00 0.00 0.00 3.21
65 66 7.056635 CCTAAAAGATGACCCATTGTAGACAT 58.943 38.462 0.00 0.00 0.00 3.06
66 67 6.414732 CCTAAAAGATGACCCATTGTAGACA 58.585 40.000 0.00 0.00 0.00 3.41
67 68 5.297029 GCCTAAAAGATGACCCATTGTAGAC 59.703 44.000 0.00 0.00 0.00 2.59
68 69 5.191722 AGCCTAAAAGATGACCCATTGTAGA 59.808 40.000 0.00 0.00 0.00 2.59
69 70 5.440610 AGCCTAAAAGATGACCCATTGTAG 58.559 41.667 0.00 0.00 0.00 2.74
70 71 5.450818 AGCCTAAAAGATGACCCATTGTA 57.549 39.130 0.00 0.00 0.00 2.41
71 72 4.322057 AGCCTAAAAGATGACCCATTGT 57.678 40.909 0.00 0.00 0.00 2.71
72 73 6.774656 AGATAAGCCTAAAAGATGACCCATTG 59.225 38.462 0.00 0.00 0.00 2.82
73 74 6.915786 AGATAAGCCTAAAAGATGACCCATT 58.084 36.000 0.00 0.00 0.00 3.16
74 75 6.521527 AGATAAGCCTAAAAGATGACCCAT 57.478 37.500 0.00 0.00 0.00 4.00
75 76 5.975988 AGATAAGCCTAAAAGATGACCCA 57.024 39.130 0.00 0.00 0.00 4.51
76 77 6.357367 TGAAGATAAGCCTAAAAGATGACCC 58.643 40.000 0.00 0.00 0.00 4.46
77 78 7.865706 TTGAAGATAAGCCTAAAAGATGACC 57.134 36.000 0.00 0.00 0.00 4.02
107 108 9.308000 TGTCTCACCATATTTTTAGGAACAATT 57.692 29.630 0.00 0.00 0.00 2.32
108 109 8.877864 TGTCTCACCATATTTTTAGGAACAAT 57.122 30.769 0.00 0.00 0.00 2.71
109 110 8.698973 TTGTCTCACCATATTTTTAGGAACAA 57.301 30.769 0.00 0.00 0.00 2.83
110 111 8.698973 TTTGTCTCACCATATTTTTAGGAACA 57.301 30.769 0.00 0.00 0.00 3.18
113 114 9.308000 ACAATTTGTCTCACCATATTTTTAGGA 57.692 29.630 0.00 0.00 0.00 2.94
114 115 9.357652 CACAATTTGTCTCACCATATTTTTAGG 57.642 33.333 0.00 0.00 0.00 2.69
115 116 8.863049 GCACAATTTGTCTCACCATATTTTTAG 58.137 33.333 0.00 0.00 0.00 1.85
116 117 8.584157 AGCACAATTTGTCTCACCATATTTTTA 58.416 29.630 0.00 0.00 0.00 1.52
117 118 7.444299 AGCACAATTTGTCTCACCATATTTTT 58.556 30.769 0.00 0.00 0.00 1.94
118 119 6.996509 AGCACAATTTGTCTCACCATATTTT 58.003 32.000 0.00 0.00 0.00 1.82
119 120 6.594788 AGCACAATTTGTCTCACCATATTT 57.405 33.333 0.00 0.00 0.00 1.40
120 121 7.611467 TCTTAGCACAATTTGTCTCACCATATT 59.389 33.333 0.00 0.00 0.00 1.28
121 122 7.112122 TCTTAGCACAATTTGTCTCACCATAT 58.888 34.615 0.00 0.00 0.00 1.78
122 123 6.472016 TCTTAGCACAATTTGTCTCACCATA 58.528 36.000 0.00 0.00 0.00 2.74
123 124 5.316167 TCTTAGCACAATTTGTCTCACCAT 58.684 37.500 0.00 0.00 0.00 3.55
124 125 4.713553 TCTTAGCACAATTTGTCTCACCA 58.286 39.130 0.00 0.00 0.00 4.17
125 126 4.997395 TCTCTTAGCACAATTTGTCTCACC 59.003 41.667 0.00 0.00 0.00 4.02
126 127 6.369890 TGATCTCTTAGCACAATTTGTCTCAC 59.630 38.462 0.00 0.00 0.00 3.51
127 128 6.466812 TGATCTCTTAGCACAATTTGTCTCA 58.533 36.000 0.00 0.00 0.00 3.27
128 129 6.974932 TGATCTCTTAGCACAATTTGTCTC 57.025 37.500 0.00 0.00 0.00 3.36
129 130 7.337167 AGATGATCTCTTAGCACAATTTGTCT 58.663 34.615 0.00 3.34 0.00 3.41
130 131 7.551035 AGATGATCTCTTAGCACAATTTGTC 57.449 36.000 0.00 0.00 0.00 3.18
131 132 7.934855 AAGATGATCTCTTAGCACAATTTGT 57.065 32.000 0.00 0.00 42.56 2.83
132 133 9.073368 CAAAAGATGATCTCTTAGCACAATTTG 57.927 33.333 0.00 0.00 43.60 2.32
133 134 8.800332 ACAAAAGATGATCTCTTAGCACAATTT 58.200 29.630 0.00 0.00 43.60 1.82
134 135 8.345724 ACAAAAGATGATCTCTTAGCACAATT 57.654 30.769 0.00 0.00 43.60 2.32
135 136 7.828223 AGACAAAAGATGATCTCTTAGCACAAT 59.172 33.333 0.00 0.00 43.60 2.71
136 137 7.164122 AGACAAAAGATGATCTCTTAGCACAA 58.836 34.615 0.00 0.00 43.60 3.33
137 138 6.705302 AGACAAAAGATGATCTCTTAGCACA 58.295 36.000 0.00 0.00 43.60 4.57
138 139 7.548780 AGAAGACAAAAGATGATCTCTTAGCAC 59.451 37.037 0.00 2.95 43.60 4.40
139 140 7.619050 AGAAGACAAAAGATGATCTCTTAGCA 58.381 34.615 0.00 0.00 43.60 3.49
140 141 7.981225 AGAGAAGACAAAAGATGATCTCTTAGC 59.019 37.037 0.00 0.00 43.60 3.09
141 142 9.874205 AAGAGAAGACAAAAGATGATCTCTTAG 57.126 33.333 12.09 6.73 44.86 2.18
182 183 9.665719 GGAGAGAAAAATCATAAGAGAAGACTT 57.334 33.333 0.00 0.00 0.00 3.01
183 184 9.045745 AGGAGAGAAAAATCATAAGAGAAGACT 57.954 33.333 0.00 0.00 0.00 3.24
184 185 9.313118 GAGGAGAGAAAAATCATAAGAGAAGAC 57.687 37.037 0.00 0.00 0.00 3.01
185 186 8.482128 GGAGGAGAGAAAAATCATAAGAGAAGA 58.518 37.037 0.00 0.00 0.00 2.87
186 187 8.263640 TGGAGGAGAGAAAAATCATAAGAGAAG 58.736 37.037 0.00 0.00 0.00 2.85
187 188 8.150827 TGGAGGAGAGAAAAATCATAAGAGAA 57.849 34.615 0.00 0.00 0.00 2.87
188 189 7.739995 TGGAGGAGAGAAAAATCATAAGAGA 57.260 36.000 0.00 0.00 0.00 3.10
189 190 8.431222 AGATGGAGGAGAGAAAAATCATAAGAG 58.569 37.037 0.00 0.00 0.00 2.85
190 191 8.329346 AGATGGAGGAGAGAAAAATCATAAGA 57.671 34.615 0.00 0.00 0.00 2.10
191 192 8.209584 TGAGATGGAGGAGAGAAAAATCATAAG 58.790 37.037 0.00 0.00 0.00 1.73
192 193 8.094284 TGAGATGGAGGAGAGAAAAATCATAA 57.906 34.615 0.00 0.00 0.00 1.90
193 194 7.681259 TGAGATGGAGGAGAGAAAAATCATA 57.319 36.000 0.00 0.00 0.00 2.15
194 195 6.572182 TGAGATGGAGGAGAGAAAAATCAT 57.428 37.500 0.00 0.00 0.00 2.45
195 196 6.157471 TGATGAGATGGAGGAGAGAAAAATCA 59.843 38.462 0.00 0.00 0.00 2.57
196 197 6.590068 TGATGAGATGGAGGAGAGAAAAATC 58.410 40.000 0.00 0.00 0.00 2.17
197 198 6.572182 TGATGAGATGGAGGAGAGAAAAAT 57.428 37.500 0.00 0.00 0.00 1.82
198 199 6.572182 ATGATGAGATGGAGGAGAGAAAAA 57.428 37.500 0.00 0.00 0.00 1.94
199 200 6.572182 AATGATGAGATGGAGGAGAGAAAA 57.428 37.500 0.00 0.00 0.00 2.29
200 201 6.572182 AAATGATGAGATGGAGGAGAGAAA 57.428 37.500 0.00 0.00 0.00 2.52
201 202 7.868792 ATAAATGATGAGATGGAGGAGAGAA 57.131 36.000 0.00 0.00 0.00 2.87
202 203 7.868792 AATAAATGATGAGATGGAGGAGAGA 57.131 36.000 0.00 0.00 0.00 3.10
203 204 8.921353 AAAATAAATGATGAGATGGAGGAGAG 57.079 34.615 0.00 0.00 0.00 3.20
204 205 9.784531 GTAAAATAAATGATGAGATGGAGGAGA 57.215 33.333 0.00 0.00 0.00 3.71
205 206 8.715998 CGTAAAATAAATGATGAGATGGAGGAG 58.284 37.037 0.00 0.00 0.00 3.69
206 207 8.210946 ACGTAAAATAAATGATGAGATGGAGGA 58.789 33.333 0.00 0.00 0.00 3.71
207 208 8.285394 CACGTAAAATAAATGATGAGATGGAGG 58.715 37.037 0.00 0.00 0.00 4.30
208 209 8.285394 CCACGTAAAATAAATGATGAGATGGAG 58.715 37.037 0.00 0.00 0.00 3.86
209 210 7.990314 TCCACGTAAAATAAATGATGAGATGGA 59.010 33.333 0.00 0.00 0.00 3.41
210 211 8.153479 TCCACGTAAAATAAATGATGAGATGG 57.847 34.615 0.00 0.00 0.00 3.51
211 212 9.438291 GTTCCACGTAAAATAAATGATGAGATG 57.562 33.333 0.00 0.00 0.00 2.90
212 213 9.396022 AGTTCCACGTAAAATAAATGATGAGAT 57.604 29.630 0.00 0.00 0.00 2.75
213 214 8.786826 AGTTCCACGTAAAATAAATGATGAGA 57.213 30.769 0.00 0.00 0.00 3.27
214 215 8.883731 AGAGTTCCACGTAAAATAAATGATGAG 58.116 33.333 0.00 0.00 0.00 2.90
215 216 8.786826 AGAGTTCCACGTAAAATAAATGATGA 57.213 30.769 0.00 0.00 0.00 2.92
243 244 9.672673 GTAAGGGCATGTACAATGATTATATCT 57.327 33.333 0.00 0.00 0.00 1.98
244 245 8.604035 CGTAAGGGCATGTACAATGATTATATC 58.396 37.037 0.00 0.00 0.00 1.63
245 246 8.100791 ACGTAAGGGCATGTACAATGATTATAT 58.899 33.333 0.00 0.00 46.39 0.86
246 247 7.446769 ACGTAAGGGCATGTACAATGATTATA 58.553 34.615 0.00 0.00 46.39 0.98
247 248 6.296026 ACGTAAGGGCATGTACAATGATTAT 58.704 36.000 0.00 0.00 46.39 1.28
248 249 5.676552 ACGTAAGGGCATGTACAATGATTA 58.323 37.500 0.00 0.00 46.39 1.75
249 250 4.523083 ACGTAAGGGCATGTACAATGATT 58.477 39.130 0.00 0.00 46.39 2.57
250 251 4.150897 ACGTAAGGGCATGTACAATGAT 57.849 40.909 0.00 0.00 46.39 2.45
251 252 3.620427 ACGTAAGGGCATGTACAATGA 57.380 42.857 0.00 0.00 46.39 2.57
252 253 3.807622 CCTACGTAAGGGCATGTACAATG 59.192 47.826 0.00 0.12 42.32 2.82
253 254 4.067972 CCTACGTAAGGGCATGTACAAT 57.932 45.455 0.00 0.00 42.32 2.71
254 255 3.530265 CCTACGTAAGGGCATGTACAA 57.470 47.619 0.00 0.00 42.32 2.41
266 267 9.537192 CAATTGAATAATCCTACACCTACGTAA 57.463 33.333 0.00 0.00 0.00 3.18
267 268 7.654520 GCAATTGAATAATCCTACACCTACGTA 59.345 37.037 10.34 0.00 0.00 3.57
268 269 6.482308 GCAATTGAATAATCCTACACCTACGT 59.518 38.462 10.34 0.00 0.00 3.57
269 270 6.706270 AGCAATTGAATAATCCTACACCTACG 59.294 38.462 10.34 0.00 0.00 3.51
270 271 7.520614 GCAGCAATTGAATAATCCTACACCTAC 60.521 40.741 10.34 0.00 0.00 3.18
271 272 6.486657 GCAGCAATTGAATAATCCTACACCTA 59.513 38.462 10.34 0.00 0.00 3.08
272 273 5.300286 GCAGCAATTGAATAATCCTACACCT 59.700 40.000 10.34 0.00 0.00 4.00
273 274 5.300286 AGCAGCAATTGAATAATCCTACACC 59.700 40.000 10.34 0.00 0.00 4.16
274 275 6.382869 AGCAGCAATTGAATAATCCTACAC 57.617 37.500 10.34 0.00 0.00 2.90
275 276 7.938490 TGATAGCAGCAATTGAATAATCCTACA 59.062 33.333 10.34 0.00 0.00 2.74
276 277 8.327941 TGATAGCAGCAATTGAATAATCCTAC 57.672 34.615 10.34 0.00 0.00 3.18
277 278 9.170734 GATGATAGCAGCAATTGAATAATCCTA 57.829 33.333 10.34 0.00 0.00 2.94
278 279 7.668469 TGATGATAGCAGCAATTGAATAATCCT 59.332 33.333 10.34 0.00 37.51 3.24
279 280 7.754027 GTGATGATAGCAGCAATTGAATAATCC 59.246 37.037 10.34 0.00 42.82 3.01
280 281 8.294577 TGTGATGATAGCAGCAATTGAATAATC 58.705 33.333 10.34 5.58 42.82 1.75
281 282 8.173542 TGTGATGATAGCAGCAATTGAATAAT 57.826 30.769 10.34 0.00 42.82 1.28
282 283 7.255346 CCTGTGATGATAGCAGCAATTGAATAA 60.255 37.037 10.34 0.00 42.82 1.40
283 284 6.206048 CCTGTGATGATAGCAGCAATTGAATA 59.794 38.462 10.34 0.00 42.82 1.75
284 285 5.009710 CCTGTGATGATAGCAGCAATTGAAT 59.990 40.000 10.34 0.00 42.82 2.57
285 286 4.337274 CCTGTGATGATAGCAGCAATTGAA 59.663 41.667 10.34 0.00 42.82 2.69
286 287 3.881089 CCTGTGATGATAGCAGCAATTGA 59.119 43.478 10.34 0.00 42.82 2.57
287 288 3.630769 ACCTGTGATGATAGCAGCAATTG 59.369 43.478 0.00 0.00 42.82 2.32
288 289 3.881688 GACCTGTGATGATAGCAGCAATT 59.118 43.478 0.00 0.00 42.82 2.32
289 290 3.474600 GACCTGTGATGATAGCAGCAAT 58.525 45.455 0.00 0.00 42.82 3.56
290 291 2.420547 GGACCTGTGATGATAGCAGCAA 60.421 50.000 0.00 0.00 42.82 3.91
291 292 1.139654 GGACCTGTGATGATAGCAGCA 59.860 52.381 0.00 0.00 38.25 4.41
292 293 1.139654 TGGACCTGTGATGATAGCAGC 59.860 52.381 0.00 0.00 0.00 5.25
293 294 2.697229 TCTGGACCTGTGATGATAGCAG 59.303 50.000 0.00 0.00 0.00 4.24
294 295 2.750814 TCTGGACCTGTGATGATAGCA 58.249 47.619 0.00 0.00 0.00 3.49
295 296 3.827008 TTCTGGACCTGTGATGATAGC 57.173 47.619 0.00 0.00 0.00 2.97
296 297 7.060383 ACTAATTCTGGACCTGTGATGATAG 57.940 40.000 0.00 0.00 0.00 2.08
297 298 7.275183 CAACTAATTCTGGACCTGTGATGATA 58.725 38.462 0.00 0.00 0.00 2.15
298 299 5.965033 ACTAATTCTGGACCTGTGATGAT 57.035 39.130 0.00 0.00 0.00 2.45
299 300 5.491070 CAACTAATTCTGGACCTGTGATGA 58.509 41.667 0.00 0.00 0.00 2.92
300 301 4.095483 GCAACTAATTCTGGACCTGTGATG 59.905 45.833 0.00 0.00 0.00 3.07
301 302 4.265073 GCAACTAATTCTGGACCTGTGAT 58.735 43.478 0.00 0.00 0.00 3.06
302 303 3.559171 GGCAACTAATTCTGGACCTGTGA 60.559 47.826 0.00 0.00 0.00 3.58
303 304 2.749621 GGCAACTAATTCTGGACCTGTG 59.250 50.000 0.00 0.00 0.00 3.66
304 305 3.073274 GGCAACTAATTCTGGACCTGT 57.927 47.619 0.00 0.00 0.00 4.00
319 320 1.756538 CAATTATGGGGGACAGGCAAC 59.243 52.381 0.00 0.00 0.00 4.17
320 321 1.360852 ACAATTATGGGGGACAGGCAA 59.639 47.619 0.00 0.00 0.00 4.52
321 322 1.006813 ACAATTATGGGGGACAGGCA 58.993 50.000 0.00 0.00 0.00 4.75
322 323 2.583143 GTACAATTATGGGGGACAGGC 58.417 52.381 0.00 0.00 0.00 4.85
323 324 2.171870 ACGTACAATTATGGGGGACAGG 59.828 50.000 0.00 0.00 0.00 4.00
324 325 3.202906 CACGTACAATTATGGGGGACAG 58.797 50.000 0.00 0.00 0.00 3.51
325 326 2.572556 ACACGTACAATTATGGGGGACA 59.427 45.455 0.00 0.00 0.00 4.02
326 327 3.271055 ACACGTACAATTATGGGGGAC 57.729 47.619 0.00 0.00 0.00 4.46
327 328 4.040706 GGATACACGTACAATTATGGGGGA 59.959 45.833 0.00 0.00 0.00 4.81
328 329 4.041198 AGGATACACGTACAATTATGGGGG 59.959 45.833 0.00 0.00 41.41 5.40
329 330 4.994852 CAGGATACACGTACAATTATGGGG 59.005 45.833 0.00 0.00 41.41 4.96
330 331 5.607477 ACAGGATACACGTACAATTATGGG 58.393 41.667 0.00 0.00 41.41 4.00
331 332 6.759356 TGAACAGGATACACGTACAATTATGG 59.241 38.462 0.00 0.00 41.41 2.74
332 333 7.764695 TGAACAGGATACACGTACAATTATG 57.235 36.000 0.00 0.00 41.41 1.90
333 334 8.958119 AATGAACAGGATACACGTACAATTAT 57.042 30.769 0.00 0.00 41.41 1.28
334 335 8.780846 AAATGAACAGGATACACGTACAATTA 57.219 30.769 0.00 0.00 41.41 1.40
335 336 7.681939 AAATGAACAGGATACACGTACAATT 57.318 32.000 0.00 0.00 41.41 2.32
336 337 7.361713 CCAAAATGAACAGGATACACGTACAAT 60.362 37.037 0.00 0.00 41.41 2.71
337 338 6.072948 CCAAAATGAACAGGATACACGTACAA 60.073 38.462 0.00 0.00 41.41 2.41
338 339 5.410132 CCAAAATGAACAGGATACACGTACA 59.590 40.000 0.00 0.00 41.41 2.90
339 340 5.410439 ACCAAAATGAACAGGATACACGTAC 59.590 40.000 0.00 0.00 41.41 3.67
340 341 5.553123 ACCAAAATGAACAGGATACACGTA 58.447 37.500 0.00 0.00 41.41 3.57
346 347 4.457603 CGGTGAACCAAAATGAACAGGATA 59.542 41.667 0.00 0.00 35.14 2.59
354 355 1.339610 CAAGCCGGTGAACCAAAATGA 59.660 47.619 1.90 0.00 35.14 2.57
381 386 6.395629 GGCGTCTATTATATTTGCTCCTGTA 58.604 40.000 0.00 0.00 0.00 2.74
384 389 4.021368 ACGGCGTCTATTATATTTGCTCCT 60.021 41.667 6.77 0.00 0.00 3.69
385 390 4.091509 CACGGCGTCTATTATATTTGCTCC 59.908 45.833 10.85 0.00 0.00 4.70
398 403 2.429571 GTTCGTGCACGGCGTCTA 60.430 61.111 36.41 15.69 40.29 2.59
413 418 2.169330 GTGAGGAGAGAGTAACGGGTT 58.831 52.381 0.00 0.00 0.00 4.11
421 426 1.340991 GCTGAGGAGTGAGGAGAGAGT 60.341 57.143 0.00 0.00 0.00 3.24
446 451 2.486472 AGCTTGTTCCAGTGGATGAG 57.514 50.000 14.00 12.06 0.00 2.90
497 506 4.589908 AGTTGGAGGCGATAATTTTCACT 58.410 39.130 0.00 0.00 0.00 3.41
511 520 2.350522 GCACACTGACATAGTTGGAGG 58.649 52.381 0.00 0.00 37.60 4.30
1001 1016 1.962306 GCCCACGCCTTAACGAACA 60.962 57.895 0.00 0.00 36.70 3.18
1112 1127 1.154395 GGCGCGAACTTTCTCAAGC 60.154 57.895 12.10 0.00 32.57 4.01
1152 1167 2.493278 AGAGCCCGAACATTTGAAATGG 59.507 45.455 20.69 5.01 0.00 3.16
1153 1168 3.504863 CAGAGCCCGAACATTTGAAATG 58.495 45.455 15.82 15.82 0.00 2.32
1154 1169 2.094545 GCAGAGCCCGAACATTTGAAAT 60.095 45.455 0.00 0.00 0.00 2.17
1169 1193 3.181516 CCAACGAAATACTGAAGCAGAGC 60.182 47.826 0.82 0.00 35.18 4.09
1172 1196 3.745975 TCACCAACGAAATACTGAAGCAG 59.254 43.478 0.00 0.00 37.52 4.24
1174 1198 4.066710 GTCACCAACGAAATACTGAAGC 57.933 45.455 0.00 0.00 0.00 3.86
1269 3121 2.359850 GGCGTTGGATGTCCTGCA 60.360 61.111 11.55 0.00 36.82 4.41
1319 3568 2.167861 GCGAGTGGGACGATGCTTC 61.168 63.158 0.00 0.00 0.00 3.86
1321 3570 4.148825 GGCGAGTGGGACGATGCT 62.149 66.667 0.00 0.00 0.00 3.79
1415 3667 0.741915 GCTTCTTCCTCGTCCGAGAT 59.258 55.000 17.73 0.00 44.53 2.75
1426 3678 0.461693 AGATGAGCAGCGCTTCTTCC 60.462 55.000 11.78 0.00 39.88 3.46
1429 3681 0.461693 GGAAGATGAGCAGCGCTTCT 60.462 55.000 10.01 10.01 39.88 2.85
1448 3706 1.517257 GGTCACGGACATCAGCGAG 60.517 63.158 6.41 0.00 33.68 5.03
1453 3711 2.994995 AGGCGGTCACGGACATCA 60.995 61.111 6.41 0.00 41.36 3.07
1705 3978 1.939785 GTCAGCGTCCTCGTATGCG 60.940 63.158 0.00 0.00 39.49 4.73
1720 3993 2.122324 TTCCCCCACCCGAAGTCA 60.122 61.111 0.00 0.00 0.00 3.41
1750 4023 0.533755 GGTTCATCCTGATGGGCTCG 60.534 60.000 7.26 0.00 39.24 5.03
1945 4381 2.936498 ACTTAGGACAATCAAATCCGCG 59.064 45.455 0.00 0.00 40.20 6.46
1947 4383 4.267928 GTCGACTTAGGACAATCAAATCCG 59.732 45.833 8.70 0.00 40.20 4.18
2052 5658 2.869897 CAAGCTACCGAGAACAGACTC 58.130 52.381 0.00 0.00 0.00 3.36
2057 5663 4.571250 CGCAAGCTACCGAGAACA 57.429 55.556 0.00 0.00 0.00 3.18
2089 5695 1.116308 TAACGCCTCATCGGATGGAA 58.884 50.000 17.42 0.00 33.16 3.53
2106 5712 0.320050 TGCATCTGCTGACGTGGTAA 59.680 50.000 0.00 0.00 42.66 2.85
2107 5713 0.320050 TTGCATCTGCTGACGTGGTA 59.680 50.000 0.00 0.00 42.66 3.25
2108 5714 0.534877 TTTGCATCTGCTGACGTGGT 60.535 50.000 0.00 0.00 42.66 4.16
2109 5715 0.806868 ATTTGCATCTGCTGACGTGG 59.193 50.000 0.00 0.00 42.66 4.94
2110 5716 1.528400 CGATTTGCATCTGCTGACGTG 60.528 52.381 0.00 0.00 42.66 4.49
2144 5759 1.254954 GACGACAAGGGTGGAGTAGT 58.745 55.000 0.00 0.00 0.00 2.73
2150 5765 2.357034 CACCGACGACAAGGGTGG 60.357 66.667 0.00 0.00 45.84 4.61
2172 5787 2.124570 ATTAGGGTGCAGCCGCTG 60.125 61.111 28.24 16.47 39.64 5.18
2174 5789 0.880718 GTAGATTAGGGTGCAGCCGC 60.881 60.000 28.24 18.45 38.44 6.53
2176 5791 1.486726 ACAGTAGATTAGGGTGCAGCC 59.513 52.381 27.66 27.66 0.00 4.85
2177 5792 2.555199 CACAGTAGATTAGGGTGCAGC 58.445 52.381 7.55 7.55 0.00 5.25
2178 5793 2.743183 GCCACAGTAGATTAGGGTGCAG 60.743 54.545 0.00 0.00 0.00 4.41
2179 5794 1.209504 GCCACAGTAGATTAGGGTGCA 59.790 52.381 0.00 0.00 0.00 4.57
2180 5795 1.209504 TGCCACAGTAGATTAGGGTGC 59.790 52.381 0.00 0.00 0.00 5.01
2182 5797 2.546899 TGTGCCACAGTAGATTAGGGT 58.453 47.619 0.00 0.00 0.00 4.34
2187 6080 3.994392 CGTAGTTTGTGCCACAGTAGATT 59.006 43.478 0.00 0.00 0.00 2.40
2196 6089 2.666862 CGGCCGTAGTTTGTGCCA 60.667 61.111 19.50 0.00 44.22 4.92
2214 6107 1.536284 CCGCCGTAGAAGGATGAAGAC 60.536 57.143 0.00 0.00 0.00 3.01
2251 8015 2.969238 CGATGCGACCTCCATGGC 60.969 66.667 6.96 0.00 40.22 4.40
2256 8020 4.530857 CCACCCGATGCGACCTCC 62.531 72.222 0.00 0.00 0.00 4.30
2260 8024 1.887707 GGAATCCACCCGATGCGAC 60.888 63.158 0.00 0.00 0.00 5.19
2301 8065 1.153765 TCTCTCTTGCGCCATGTCG 60.154 57.895 4.18 0.00 0.00 4.35
2305 8069 1.446792 CGTGTCTCTCTTGCGCCAT 60.447 57.895 4.18 0.00 0.00 4.40
2306 8070 2.049156 CGTGTCTCTCTTGCGCCA 60.049 61.111 4.18 0.00 0.00 5.69
2318 8082 1.644786 GGCAACCATAGCACCGTGTC 61.645 60.000 0.00 0.00 0.00 3.67
2334 8098 3.664025 CTCCTCGGCGTCAATGGCA 62.664 63.158 6.85 0.00 0.00 4.92
2336 8100 0.877649 CATCTCCTCGGCGTCAATGG 60.878 60.000 6.85 3.14 0.00 3.16
2349 8113 2.203181 GCAGCAGCTCCCATCTCC 60.203 66.667 0.00 0.00 37.91 3.71
2361 8125 0.389296 GCATGCATCAACAAGCAGCA 60.389 50.000 14.21 0.00 44.94 4.41
2362 8126 1.410737 CGCATGCATCAACAAGCAGC 61.411 55.000 19.57 0.00 44.94 5.25
2390 8154 3.063084 ACTGGAGACCGAGGCGAC 61.063 66.667 0.00 0.00 0.00 5.19
2391 8155 3.062466 CACTGGAGACCGAGGCGA 61.062 66.667 0.00 0.00 0.00 5.54
2392 8156 3.062466 TCACTGGAGACCGAGGCG 61.062 66.667 0.00 0.00 0.00 5.52
2393 8157 1.608717 ATGTCACTGGAGACCGAGGC 61.609 60.000 0.00 0.00 37.73 4.70
2406 8170 0.179124 GACTGGCTCGGAGATGTCAC 60.179 60.000 9.69 0.00 33.89 3.67
2409 8173 2.060980 GGGACTGGCTCGGAGATGT 61.061 63.158 9.69 3.50 33.89 3.06
2452 8216 4.202243 GGGAAGAGAAGAGAGGACATCATG 60.202 50.000 0.00 0.00 0.00 3.07
2453 8217 3.966665 GGGAAGAGAAGAGAGGACATCAT 59.033 47.826 0.00 0.00 0.00 2.45
2474 8238 4.207165 TGACTGGACTTGAAAGAAAAGGG 58.793 43.478 0.00 0.00 0.00 3.95
2496 8260 3.679980 GCTCGACACAACATCACAAGTAT 59.320 43.478 0.00 0.00 0.00 2.12
2510 8274 1.140816 GGAACTGAACTGCTCGACAC 58.859 55.000 0.00 0.00 0.00 3.67
2512 8276 1.527311 GTTGGAACTGAACTGCTCGAC 59.473 52.381 0.00 0.00 0.00 4.20
2514 8278 0.508641 CGTTGGAACTGAACTGCTCG 59.491 55.000 0.00 0.00 0.00 5.03
2515 8279 0.868406 CCGTTGGAACTGAACTGCTC 59.132 55.000 0.00 0.00 0.00 4.26
2516 8280 1.166531 GCCGTTGGAACTGAACTGCT 61.167 55.000 0.00 0.00 32.57 4.24
2517 8281 1.166531 AGCCGTTGGAACTGAACTGC 61.167 55.000 0.00 0.00 34.72 4.40
2518 8282 0.588252 CAGCCGTTGGAACTGAACTG 59.412 55.000 0.00 0.00 33.10 3.16
2533 8336 3.071580 GTGACTAGCATCACCAGCC 57.928 57.895 2.73 0.00 42.74 4.85
2562 8365 5.789512 GCAAATGATTTGTAAAAACATGGCG 59.210 36.000 18.12 0.00 42.56 5.69
2594 8397 3.118223 AGCTAAGGGATACAAGTTGCTCC 60.118 47.826 14.08 14.08 39.74 4.70
2598 8401 3.865745 CACGAGCTAAGGGATACAAGTTG 59.134 47.826 0.00 0.00 39.74 3.16
2600 8403 3.097614 ACACGAGCTAAGGGATACAAGT 58.902 45.455 0.00 0.00 39.74 3.16
2606 8409 1.557099 TGACACACGAGCTAAGGGAT 58.443 50.000 0.00 0.00 0.00 3.85
2616 9565 4.330944 AGAAGGTTAACATGACACACGA 57.669 40.909 8.10 0.00 0.00 4.35
2627 9576 9.581099 TCTTTGAATGTTGAAAAGAAGGTTAAC 57.419 29.630 0.00 0.00 37.08 2.01
2630 9579 9.317936 GAATCTTTGAATGTTGAAAAGAAGGTT 57.682 29.630 1.61 0.00 41.75 3.50
2655 9608 4.083324 GCCTTGAACAACGATTCTCATTGA 60.083 41.667 0.00 0.00 0.00 2.57
2666 9619 1.010125 CACACCGCCTTGAACAACG 60.010 57.895 0.00 0.00 0.00 4.10
2667 9620 1.301423 TACACACCGCCTTGAACAAC 58.699 50.000 0.00 0.00 0.00 3.32
2668 9621 1.876799 CATACACACCGCCTTGAACAA 59.123 47.619 0.00 0.00 0.00 2.83
2669 9622 1.202710 ACATACACACCGCCTTGAACA 60.203 47.619 0.00 0.00 0.00 3.18
2670 9623 1.196808 CACATACACACCGCCTTGAAC 59.803 52.381 0.00 0.00 0.00 3.18
2671 9624 1.518325 CACATACACACCGCCTTGAA 58.482 50.000 0.00 0.00 0.00 2.69
2672 9625 0.321210 CCACATACACACCGCCTTGA 60.321 55.000 0.00 0.00 0.00 3.02
2673 9626 0.605319 ACCACATACACACCGCCTTG 60.605 55.000 0.00 0.00 0.00 3.61
2674 9627 0.109723 AACCACATACACACCGCCTT 59.890 50.000 0.00 0.00 0.00 4.35
2680 11474 0.796312 CGCTCCAACCACATACACAC 59.204 55.000 0.00 0.00 0.00 3.82
2685 11479 1.298340 CACCCGCTCCAACCACATA 59.702 57.895 0.00 0.00 0.00 2.29
2687 11481 4.263572 CCACCCGCTCCAACCACA 62.264 66.667 0.00 0.00 0.00 4.17
2691 11485 4.966787 TTGGCCACCCGCTCCAAC 62.967 66.667 3.88 0.00 35.17 3.77
2692 11486 4.659172 CTTGGCCACCCGCTCCAA 62.659 66.667 3.88 0.00 37.52 3.53
2698 11492 2.994643 AAAACCTCCTTGGCCACCCG 62.995 60.000 3.88 0.00 40.22 5.28
2699 11493 0.762842 AAAAACCTCCTTGGCCACCC 60.763 55.000 3.88 0.00 40.22 4.61
2701 11495 3.161866 TGATAAAAACCTCCTTGGCCAC 58.838 45.455 3.88 0.00 40.22 5.01
2702 11496 3.534357 TGATAAAAACCTCCTTGGCCA 57.466 42.857 0.00 0.00 40.22 5.36
2714 11508 9.738832 GCCGGCTATTTAAAACTATGATAAAAA 57.261 29.630 22.15 0.00 0.00 1.94
2715 11509 9.127277 AGCCGGCTATTTAAAACTATGATAAAA 57.873 29.630 31.86 0.00 0.00 1.52
2716 11510 8.685838 AGCCGGCTATTTAAAACTATGATAAA 57.314 30.769 31.86 0.00 0.00 1.40
2717 11511 9.953565 ATAGCCGGCTATTTAAAACTATGATAA 57.046 29.630 37.79 13.98 35.92 1.75
2719 11513 9.601217 CTATAGCCGGCTATTTAAAACTATGAT 57.399 33.333 44.65 25.13 39.65 2.45
2720 11514 7.548075 GCTATAGCCGGCTATTTAAAACTATGA 59.452 37.037 44.65 25.48 39.65 2.15
2722 11516 7.845066 GCTATAGCCGGCTATTTAAAACTAT 57.155 36.000 44.65 26.21 39.65 2.12
2755 11599 0.451783 GACCATTTAGCGGCACCTTG 59.548 55.000 1.45 0.00 0.00 3.61
2759 11603 2.403586 GCGACCATTTAGCGGCAC 59.596 61.111 1.45 0.00 0.00 5.01
2762 11606 0.742990 TGAAGGCGACCATTTAGCGG 60.743 55.000 0.00 0.00 0.00 5.52
2766 11610 5.250200 ACTATTTGTGAAGGCGACCATTTA 58.750 37.500 0.00 0.00 0.00 1.40
2771 11615 2.007608 GGACTATTTGTGAAGGCGACC 58.992 52.381 0.00 0.00 0.00 4.79
2772 11616 1.659098 CGGACTATTTGTGAAGGCGAC 59.341 52.381 0.00 0.00 0.00 5.19
2773 11617 2.004583 CGGACTATTTGTGAAGGCGA 57.995 50.000 0.00 0.00 0.00 5.54
2775 11619 1.739067 AGCGGACTATTTGTGAAGGC 58.261 50.000 0.00 0.00 0.00 4.35
2776 11620 4.201822 GCTAAAGCGGACTATTTGTGAAGG 60.202 45.833 0.00 0.00 0.00 3.46
2777 11621 4.201822 GGCTAAAGCGGACTATTTGTGAAG 60.202 45.833 0.00 0.00 43.26 3.02
2778 11622 3.687698 GGCTAAAGCGGACTATTTGTGAA 59.312 43.478 0.00 0.00 43.26 3.18
2779 11623 3.267483 GGCTAAAGCGGACTATTTGTGA 58.733 45.455 0.00 0.00 43.26 3.58
2780 11624 2.354821 GGGCTAAAGCGGACTATTTGTG 59.645 50.000 0.00 0.00 43.26 3.33
2781 11625 2.640184 GGGCTAAAGCGGACTATTTGT 58.360 47.619 0.00 0.00 43.26 2.83
2782 11626 1.597663 CGGGCTAAAGCGGACTATTTG 59.402 52.381 0.00 0.00 43.26 2.32
2783 11627 1.949465 CGGGCTAAAGCGGACTATTT 58.051 50.000 0.00 0.00 43.26 1.40
2784 11628 0.532196 GCGGGCTAAAGCGGACTATT 60.532 55.000 0.00 0.00 43.26 1.73
2785 11629 1.069258 GCGGGCTAAAGCGGACTAT 59.931 57.895 0.00 0.00 43.26 2.12
2787 11631 1.400530 ATAGCGGGCTAAAGCGGACT 61.401 55.000 4.26 0.00 43.26 3.85
2788 11632 0.316204 TATAGCGGGCTAAAGCGGAC 59.684 55.000 4.26 0.00 43.26 4.79
2790 11634 1.014564 GCTATAGCGGGCTAAAGCGG 61.015 60.000 9.40 0.00 43.26 5.52
2791 11635 2.446341 GCTATAGCGGGCTAAAGCG 58.554 57.895 9.40 0.00 43.26 4.68
2808 11652 5.830900 CTGTAAATCAGTTATAGCGGAGC 57.169 43.478 0.00 0.00 46.69 4.70
2809 11653 4.686554 GCCTGTAAATCAGTTATAGCGGAG 59.313 45.833 0.00 0.00 42.19 4.63
2810 11654 4.502604 GGCCTGTAAATCAGTTATAGCGGA 60.503 45.833 0.00 0.00 42.19 5.54
2811 11655 3.746492 GGCCTGTAAATCAGTTATAGCGG 59.254 47.826 0.00 0.00 42.19 5.52
2812 11656 3.746492 GGGCCTGTAAATCAGTTATAGCG 59.254 47.826 0.84 0.00 42.19 4.26
2813 11657 3.746492 CGGGCCTGTAAATCAGTTATAGC 59.254 47.826 2.29 0.00 42.19 2.97
2815 11659 3.495453 GGCGGGCCTGTAAATCAGTTATA 60.495 47.826 14.55 0.00 42.19 0.98
2816 11660 2.572290 GCGGGCCTGTAAATCAGTTAT 58.428 47.619 14.55 0.00 42.19 1.89
2817 11661 1.407712 GGCGGGCCTGTAAATCAGTTA 60.408 52.381 14.55 0.00 42.19 2.24
2819 11663 1.077716 GGCGGGCCTGTAAATCAGT 60.078 57.895 14.55 0.00 42.19 3.41
2820 11664 2.180204 CGGCGGGCCTGTAAATCAG 61.180 63.158 14.55 0.00 43.27 2.90
2822 11666 2.653953 TAGCGGCGGGCCTGTAAATC 62.654 60.000 14.55 0.00 45.17 2.17
2823 11667 2.052047 ATAGCGGCGGGCCTGTAAAT 62.052 55.000 14.55 0.00 45.17 1.40
2824 11668 2.260088 AATAGCGGCGGGCCTGTAAA 62.260 55.000 14.55 0.00 45.17 2.01
2826 11670 2.260088 AAAATAGCGGCGGGCCTGTA 62.260 55.000 14.55 0.00 45.17 2.74
2830 11674 3.592814 GGAAAATAGCGGCGGGCC 61.593 66.667 9.78 0.00 45.17 5.80
2831 11675 0.887387 TATGGAAAATAGCGGCGGGC 60.887 55.000 9.78 0.00 44.05 6.13
2832 11676 1.156736 CTATGGAAAATAGCGGCGGG 58.843 55.000 9.78 0.00 0.00 6.13
2834 11678 0.517316 GGCTATGGAAAATAGCGGCG 59.483 55.000 0.51 0.51 45.83 6.46
2835 11679 0.881796 GGGCTATGGAAAATAGCGGC 59.118 55.000 10.37 0.00 45.83 6.53
2836 11680 1.156736 CGGGCTATGGAAAATAGCGG 58.843 55.000 10.37 2.96 45.83 5.52
2840 11684 8.354426 GTTTTAAATAGCGGGCTATGGAAAATA 58.646 33.333 22.50 9.79 39.03 1.40
2841 11685 6.969993 TTTAAATAGCGGGCTATGGAAAAT 57.030 33.333 13.53 0.00 39.03 1.82
2844 11688 5.194432 TGTTTTAAATAGCGGGCTATGGAA 58.806 37.500 13.53 8.30 39.03 3.53
2845 11689 4.783055 TGTTTTAAATAGCGGGCTATGGA 58.217 39.130 13.53 2.82 39.03 3.41
2846 11690 5.705609 ATGTTTTAAATAGCGGGCTATGG 57.294 39.130 13.53 0.00 39.03 2.74
2847 11691 5.920273 CCAATGTTTTAAATAGCGGGCTATG 59.080 40.000 13.53 0.00 39.03 2.23
2848 11692 5.596772 ACCAATGTTTTAAATAGCGGGCTAT 59.403 36.000 7.36 7.36 40.63 2.97
2849 11693 4.951094 ACCAATGTTTTAAATAGCGGGCTA 59.049 37.500 2.42 2.42 0.00 3.93
2850 11694 3.767131 ACCAATGTTTTAAATAGCGGGCT 59.233 39.130 0.00 0.00 0.00 5.19
2851 11695 4.118093 ACCAATGTTTTAAATAGCGGGC 57.882 40.909 0.00 0.00 0.00 6.13
2879 11723 0.683828 TATGCTGCCACCCATGTTGG 60.684 55.000 6.28 6.28 37.25 3.77
2880 11724 1.184431 TTATGCTGCCACCCATGTTG 58.816 50.000 0.00 0.00 0.00 3.33
2881 11725 2.034124 GATTATGCTGCCACCCATGTT 58.966 47.619 0.00 0.00 0.00 2.71
2884 11728 1.202976 GGAGATTATGCTGCCACCCAT 60.203 52.381 0.00 0.00 0.00 4.00
2885 11729 0.183492 GGAGATTATGCTGCCACCCA 59.817 55.000 0.00 0.00 0.00 4.51
2886 11730 0.886490 CGGAGATTATGCTGCCACCC 60.886 60.000 0.00 0.00 0.00 4.61
2887 11731 0.179045 ACGGAGATTATGCTGCCACC 60.179 55.000 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.