AutoCloner

Multiple sequence alignment - TraesCS2A01G523600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G523600	chr2A	100.000	4432	0	0	1	4432	745035208	745039639	0.000000e+00	8185.0
1	TraesCS2A01G523600	chr2A	86.813	91	8	2	1869	1957	152242273	152242361	1.010000e-16	99.0
2	TraesCS2A01G523600	chr2A	91.228	57	3	1	2805	2859	7733990	7733934	4.750000e-10	76.8
3	TraesCS2A01G523600	chr2D	86.126	1629	100	64	1	1569	613444828	613446390	0.000000e+00	1640.0
4	TraesCS2A01G523600	chr2D	85.714	1001	68	35	1593	2561	613446479	613447436	0.000000e+00	987.0
5	TraesCS2A01G523600	chr2D	83.272	813	63	37	2850	3636	613447421	613448186	0.000000e+00	680.0
6	TraesCS2A01G523600	chr2D	95.833	312	6	5	4121	4432	614644206	614644510	8.560000e-137	497.0
7	TraesCS2A01G523600	chr2D	85.430	302	15	16	3816	4108	614643680	614643961	2.020000e-73	287.0
8	TraesCS2A01G523600	chr2D	96.364	55	2	0	3855	3909	614638297	614638351	1.700000e-14	91.6
9	TraesCS2A01G523600	chr2D	89.796	49	5	0	3861	3909	613448524	613448572	3.700000e-06	63.9
10	TraesCS2A01G523600	chr2B	82.520	1659	156	74	1	1569	748982571	748984185	0.000000e+00	1334.0
11	TraesCS2A01G523600	chr2B	85.538	650	37	12	1593	2222	748984289	748984901	1.050000e-175	627.0
12	TraesCS2A01G523600	chr2B	97.846	325	5	1	4108	4432	749028080	749028402	1.080000e-155	560.0
13	TraesCS2A01G523600	chr2B	80.583	824	76	43	2868	3636	748997590	748998384	3.870000e-155	558.0
14	TraesCS2A01G523600	chr2B	83.385	650	49	30	2866	3492	748985127	748985740	8.380000e-152	547.0
15	TraesCS2A01G523600	chr2B	93.559	295	15	4	2556	2849	154531205	154531496	1.890000e-118	436.0
16	TraesCS2A01G523600	chr2B	79.726	656	83	30	1797	2409	748996931	748997579	3.170000e-116	429.0
17	TraesCS2A01G523600	chr2B	80.034	581	56	24	3571	4108	749027484	749028047	4.190000e-100	375.0
18	TraesCS2A01G523600	chr2B	91.710	193	16	0	2182	2374	748984902	748985094	7.310000e-68	268.0
19	TraesCS2A01G523600	chr2B	85.517	145	13	2	1632	1772	748996806	748996946	1.280000e-30	145.0
20	TraesCS2A01G523600	chr2B	88.288	111	13	0	1627	1737	141590186	141590296	2.780000e-27	134.0
21	TraesCS2A01G523600	chr2B	88.764	89	10	0	1869	1957	141590398	141590486	4.690000e-20	110.0
22	TraesCS2A01G523600	chr5A	98.276	290	4	1	2562	2851	689900386	689900098	1.420000e-139	507.0
23	TraesCS2A01G523600	chr5B	97.232	289	5	3	2556	2843	41265809	41266095	1.850000e-133	486.0
24	TraesCS2A01G523600	chr5B	95.318	299	10	4	2556	2853	592834282	592834577	5.190000e-129	472.0
25	TraesCS2A01G523600	chr7B	94.576	295	13	3	2556	2849	141013448	141013740	1.880000e-123	453.0
26	TraesCS2A01G523600	chr4A	91.765	255	15	5	2556	2808	656482734	656482984	2.540000e-92	350.0
27	TraesCS2A01G523600	chr1A	93.467	199	11	2	2654	2852	551880231	551880035	1.210000e-75	294.0
28	TraesCS2A01G523600	chr4D	81.090	312	35	14	2546	2848	442878699	442878403	1.240000e-55	228.0
29	TraesCS2A01G523600	chr4D	81.356	295	34	11	2562	2848	442882748	442883029	2.080000e-53	220.0
30	TraesCS2A01G523600	chr7D	93.130	131	9	0	2018	2148	3274403	3274533	4.520000e-45	193.0
31	TraesCS2A01G523600	chr7D	87.059	85	11	0	2265	2349	3296869	3296953	3.650000e-16	97.1
32	TraesCS2A01G523600	chr4B	79.231	260	33	11	2597	2848	551729467	551729221	1.280000e-35	161.0
33	TraesCS2A01G523600	chrUn	89.062	128	11	3	1273	1398	318968001	318967875	5.940000e-34	156.0
34	TraesCS2A01G523600	chrUn	89.062	128	11	3	1273	1398	326520564	326520438	5.940000e-34	156.0
35	TraesCS2A01G523600	chrUn	84.416	77	7	3	1786	1862	318967790	318967719	2.210000e-08	71.3
36	TraesCS2A01G523600	chrUn	84.416	77	7	3	1786	1862	326520353	326520282	2.210000e-08	71.3
37	TraesCS2A01G523600	chr6B	89.062	128	11	3	1273	1398	558751921	558751795	5.940000e-34	156.0
38	TraesCS2A01G523600	chr6B	89.231	130	7	5	1273	1398	558834671	558834545	5.940000e-34	156.0
39	TraesCS2A01G523600	chr6B	89.062	128	11	3	1273	1398	558906913	558906787	5.940000e-34	156.0
40	TraesCS2A01G523600	chr6B	84.416	77	7	3	1786	1862	558751710	558751639	2.210000e-08	71.3
41	TraesCS2A01G523600	chr6B	84.416	77	7	3	1786	1862	558834460	558834389	2.210000e-08	71.3
42	TraesCS2A01G523600	chr6B	84.416	77	7	3	1786	1862	558906702	558906631	2.210000e-08	71.3
43	TraesCS2A01G523600	chr1D	89.189	111	12	0	1627	1737	48057250	48057360	5.980000e-29	139.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G523600	chr2A	745035208	745039639	4431	False	8185.000000	8185	100.00000	1	4432	1	chr2A.!!$F2	4431
1	TraesCS2A01G523600	chr2D	613444828	613448572	3744	False	842.725000	1640	86.22700	1	3909	4	chr2D.!!$F2	3908
2	TraesCS2A01G523600	chr2D	614643680	614644510	830	False	392.000000	497	90.63150	3816	4432	2	chr2D.!!$F3	616
3	TraesCS2A01G523600	chr2B	748982571	748985740	3169	False	694.000000	1334	85.78825	1	3492	4	chr2B.!!$F3	3491
4	TraesCS2A01G523600	chr2B	749027484	749028402	918	False	467.500000	560	88.94000	3571	4432	2	chr2B.!!$F5	861
5	TraesCS2A01G523600	chr2B	748996806	748998384	1578	False	377.333333	558	81.94200	1632	3636	3	chr2B.!!$F4	2004

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
83	90	0.026803	GAGCAGCAAGGCGTTAATCG	59.973	55.0	0.00	43.12	3.34	F
226	233	0.250553	TCATCCCGTGACCCAAACAC	60.251	55.0	0.00	35.26	3.32	F
1226	1330	0.460987	CTGGGCGGAACTAAGCTGAG	60.461	60.0	0.00	0.00	3.35	F
2498	2838	0.028110	CGCGCTTCAGAAATTAGGCC	59.972	55.0	5.56	0.00	5.19	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1226	1330	0.036765	TGTACCACGCCAACTCATCC	60.037	55.0	0.00	0.00	0.00	3.51	R
1551	1672	0.304705	CGGCATGCCTTACATCGTTC	59.695	55.0	33.07	3.61	36.64	3.95	R
2640	2980	0.035439	TGAATGGAAGGACGGAAGGC	60.035	55.0	0.00	0.00	39.70	4.35	R
3540	3939	0.033504	GTTTGGCACCGAGACAGAGA	59.966	55.0	0.00	0.00	35.94	3.10	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
83	90	0.026803	GAGCAGCAAGGCGTTAATCG	59.973	55.000	0.00	0.00	43.12	3.34
110	117	0.460284	CTACACATGGACGAGGGCAC	60.460	60.000	0.00	0.00	0.00	5.01
169	176	4.226168	CCAAGTTCCAGTAGAATCCTCCTT	59.774	45.833	0.00	0.00	36.69	3.36
194	201	3.599584	CAGCCCTGACCTGCATTG	58.400	61.111	0.00	0.00	0.00	2.82
201	208	1.615116	CCTGACCTGCATTGACACCAT	60.615	52.381	0.00	0.00	0.00	3.55
218	225	3.016736	ACCATCAAAATCATCCCGTGAC	58.983	45.455	0.00	0.00	40.28	3.67
226	233	0.250553	TCATCCCGTGACCCAAACAC	60.251	55.000	0.00	0.00	35.26	3.32
227	234	0.536233	CATCCCGTGACCCAAACACA	60.536	55.000	0.00	0.00	38.04	3.72
229	236	0.748729	TCCCGTGACCCAAACACAAC	60.749	55.000	0.00	0.00	38.04	3.32
230	237	1.353804	CCGTGACCCAAACACAACG	59.646	57.895	0.00	0.00	38.04	4.10
231	238	1.353804	CGTGACCCAAACACAACGG	59.646	57.895	0.00	0.00	38.04	4.44
232	239	1.731093	GTGACCCAAACACAACGGG	59.269	57.895	0.00	0.00	46.22	5.28
258	265	5.034797	GGAATTTAATCAAACAGTAGCCGC	58.965	41.667	0.00	0.00	0.00	6.53
262	269	3.411351	CAAACAGTAGCCGCGCGT	61.411	61.111	29.95	14.20	0.00	6.01
720	780	2.317149	GATGGGGCAGAGGAAGACGG	62.317	65.000	0.00	0.00	0.00	4.79
793	858	1.010125	CGTGATTTATTGCGGCCCG	60.010	57.895	0.00	0.00	0.00	6.13
944	1036	1.745141	CGGGCTCTGGGATTCTGAAAG	60.745	57.143	0.00	0.00	0.00	2.62
956	1048	4.336713	GGATTCTGAAAGCTGTGTTATCCC	59.663	45.833	0.00	0.00	0.00	3.85
993	1085	3.972227	GCGGCAGCAGAAGAAAGA	58.028	55.556	3.18	0.00	44.35	2.52
1092	1184	3.470888	CGGGGCCGATGGAGAGTT	61.471	66.667	0.00	0.00	42.83	3.01
1213	1317	1.098050	ATAGAAAAGCAAGCTGGGCG	58.902	50.000	0.00	0.00	36.08	6.13
1226	1330	0.460987	CTGGGCGGAACTAAGCTGAG	60.461	60.000	0.00	0.00	0.00	3.35
1243	1352	0.535335	GAGGATGAGTTGGCGTGGTA	59.465	55.000	0.00	0.00	0.00	3.25
1333	1442	1.589993	CTCGCAGCCCTACATGTCG	60.590	63.158	0.00	0.00	0.00	4.35
1361	1470	1.461559	GGTCAGTCACCGCTACTACT	58.538	55.000	0.00	0.00	34.56	2.57
1362	1471	2.636830	GGTCAGTCACCGCTACTACTA	58.363	52.381	0.00	0.00	34.56	1.82
1363	1472	2.613133	GGTCAGTCACCGCTACTACTAG	59.387	54.545	0.00	0.00	34.56	2.57
1366	1475	5.055812	GTCAGTCACCGCTACTACTAGTAT	58.944	45.833	2.33	0.00	29.08	2.12
1370	1479	2.228343	CACCGCTACTACTAGTATGCCC	59.772	54.545	2.33	0.00	29.08	5.36
1394	1503	4.820173	TGCATCAAACATTTGGAATTTGCA	59.180	33.333	4.58	9.14	38.66	4.08
1403	1512	5.463061	ACATTTGGAATTTGCAGTTTTCGAG	59.537	36.000	0.00	0.00	0.00	4.04
1405	1514	3.963665	TGGAATTTGCAGTTTTCGAGTG	58.036	40.909	0.00	0.00	0.00	3.51
1434	1553	1.535028	TGTTCGATCAATGTGGTGTGC	59.465	47.619	0.00	0.00	0.00	4.57
1472	1593	3.118542	CCTTGCTTGTTTTCTCAACTGC	58.881	45.455	0.00	0.00	0.00	4.40
1475	1596	2.163412	TGCTTGTTTTCTCAACTGCGTT	59.837	40.909	0.00	0.00	0.00	4.84
1551	1672	4.899239	GCCATCCCGAGCGTCAGG	62.899	72.222	0.00	0.00	0.00	3.86
1569	1690	0.663153	GGAACGATGTAAGGCATGCC	59.337	55.000	30.12	30.12	38.06	4.40
1570	1691	0.304705	GAACGATGTAAGGCATGCCG	59.695	55.000	30.50	18.75	41.95	5.69
1571	1692	0.392461	AACGATGTAAGGCATGCCGT	60.392	50.000	30.50	29.34	38.94	5.68
1572	1693	1.089481	ACGATGTAAGGCATGCCGTG	61.089	55.000	32.12	18.61	36.89	4.94
1602	1803	5.332732	CGAATCGTAGTAGTGTCAGAGCTAG	60.333	48.000	0.00	0.00	0.00	3.42
1608	1809	7.599621	TCGTAGTAGTGTCAGAGCTAGATTATC	59.400	40.741	0.00	0.00	0.00	1.75
1623	1824	8.997323	AGCTAGATTATCTTGCATTGTTCATAC	58.003	33.333	25.15	0.00	45.43	2.39
1645	1846	9.459640	CATACTCTAATTCTGCATTTCATTTGG	57.540	33.333	0.00	0.00	0.00	3.28
1658	1863	5.925506	TTTCATTTGGTCTGATCATGCAT	57.074	34.783	0.00	0.00	0.00	3.96
1662	1867	1.675552	TGGTCTGATCATGCATGCAG	58.324	50.000	26.69	21.92	0.00	4.41
1663	1868	0.952280	GGTCTGATCATGCATGCAGG	59.048	55.000	25.78	25.78	0.00	4.85
1664	1869	0.311165	GTCTGATCATGCATGCAGGC	59.689	55.000	26.78	22.15	0.00	4.85
1665	1870	1.164041	TCTGATCATGCATGCAGGCG	61.164	55.000	26.78	16.72	36.28	5.52
1775	1992	1.867233	CTGAAACAGTCCACTGAACCG	59.133	52.381	13.75	0.00	46.59	4.44
1777	1994	1.865340	GAAACAGTCCACTGAACCGTC	59.135	52.381	13.75	0.17	46.59	4.79
1782	1999	0.663568	GTCCACTGAACCGTCGAGTG	60.664	60.000	5.13	5.13	34.92	3.51
1783	2000	0.820482	TCCACTGAACCGTCGAGTGA	60.820	55.000	12.07	0.00	36.12	3.41
1784	2001	0.663568	CCACTGAACCGTCGAGTGAC	60.664	60.000	12.07	0.80	41.91	3.67
1793	2010	1.332904	CCGTCGAGTGACTTGCAAAAC	60.333	52.381	0.00	0.00	43.21	2.43
1809	2031	5.426504	TGCAAAACTTTGTCATGTTCCATT	58.573	33.333	4.23	0.00	40.24	3.16
1824	2046	8.049117	TCATGTTCCATTTGAGCTTAATAGACT	58.951	33.333	0.00	0.00	0.00	3.24
1827	2049	5.744171	TCCATTTGAGCTTAATAGACTGCA	58.256	37.500	0.00	0.00	0.00	4.41
1986	2231	9.665719	TGTTTCATCAGAGTACTAATTTGCATA	57.334	29.630	0.00	0.00	0.00	3.14
2003	2274	7.566760	TTTGCATACTCAGAGAGAAAAACAA	57.433	32.000	3.79	0.00	33.32	2.83
2005	2276	7.750229	TGCATACTCAGAGAGAAAAACAAAT	57.250	32.000	3.79	0.00	33.32	2.32
2006	2277	7.587629	TGCATACTCAGAGAGAAAAACAAATG	58.412	34.615	3.79	0.00	33.32	2.32
2007	2278	7.229306	TGCATACTCAGAGAGAAAAACAAATGT	59.771	33.333	3.79	0.00	33.32	2.71
2008	2279	8.078596	GCATACTCAGAGAGAAAAACAAATGTT	58.921	33.333	3.79	0.00	35.09	2.71
2009	2280	9.390795	CATACTCAGAGAGAAAAACAAATGTTG	57.609	33.333	3.79	0.00	34.41	3.33
2010	2281	6.268566	ACTCAGAGAGAAAAACAAATGTTGC	58.731	36.000	3.79	0.00	34.41	4.17
2011	2282	6.127647	ACTCAGAGAGAAAAACAAATGTTGCA	60.128	34.615	3.79	0.00	34.41	4.08
2012	2283	6.035843	TCAGAGAGAAAAACAAATGTTGCAC	58.964	36.000	0.00	0.00	38.44	4.57
2013	2284	5.806502	CAGAGAGAAAAACAAATGTTGCACA	59.193	36.000	0.00	0.00	38.44	4.57
2014	2285	5.807011	AGAGAGAAAAACAAATGTTGCACAC	59.193	36.000	0.00	0.00	38.44	3.82
2015	2286	5.723295	AGAGAAAAACAAATGTTGCACACT	58.277	33.333	0.00	0.00	38.44	3.55
2016	2287	6.862209	AGAGAAAAACAAATGTTGCACACTA	58.138	32.000	0.00	0.00	38.44	2.74
2017	2288	7.319646	AGAGAAAAACAAATGTTGCACACTAA	58.680	30.769	0.00	0.00	38.44	2.24
2018	2289	7.275560	AGAGAAAAACAAATGTTGCACACTAAC	59.724	33.333	0.00	0.00	38.44	2.34
2019	2290	6.870965	AGAAAAACAAATGTTGCACACTAACA	59.129	30.769	0.00	0.00	41.72	2.41
2020	2291	7.386299	AGAAAAACAAATGTTGCACACTAACAA	59.614	29.630	0.00	0.00	40.95	2.83
2021	2292	7.426929	AAAACAAATGTTGCACACTAACAAA	57.573	28.000	0.00	0.00	40.95	2.83
2022	2293	7.426929	AAACAAATGTTGCACACTAACAAAA	57.573	28.000	0.00	0.00	40.95	2.44
2023	2294	7.426929	AACAAATGTTGCACACTAACAAAAA	57.573	28.000	0.00	0.00	40.95	1.94
2164	2436	2.098443	GGTAGGTGCTCTCTCTCTTTCG	59.902	54.545	0.00	0.00	0.00	3.46
2262	2602	2.665244	TGGCCTACCTATCCTGGGATAT	59.335	50.000	3.32	0.00	36.62	1.63
2277	2617	5.448654	CTGGGATATTCTTTGGACATTGGA	58.551	41.667	0.00	0.00	0.00	3.53
2360	2700	1.956477	CCAAAAGGAAGTGGACAGGTG	59.044	52.381	0.00	0.00	37.03	4.00
2449	2789	2.821378	TGGTTCAGTTGATGCATCCAAG	59.179	45.455	23.67	11.09	0.00	3.61
2462	2802	7.337938	TGATGCATCCAAGACTTATAACTTCA	58.662	34.615	23.67	0.00	0.00	3.02
2486	2826	3.812166	TACGCCGTATCCGCGCTTC	62.812	63.158	5.56	0.00	37.19	3.86
2488	2828	3.330853	GCCGTATCCGCGCTTCAG	61.331	66.667	5.56	0.00	0.00	3.02
2490	2830	1.226859	CCGTATCCGCGCTTCAGAA	60.227	57.895	5.56	0.00	0.00	3.02
2493	2833	1.593006	CGTATCCGCGCTTCAGAAATT	59.407	47.619	5.56	0.00	0.00	1.82
2495	2835	3.121328	CGTATCCGCGCTTCAGAAATTAG	60.121	47.826	5.56	0.00	0.00	1.73
2498	2838	0.028110	CGCGCTTCAGAAATTAGGCC	59.972	55.000	5.56	0.00	0.00	5.19
2499	2839	0.028110	GCGCTTCAGAAATTAGGCCG	59.972	55.000	0.00	0.00	0.00	6.13
2500	2840	1.369625	CGCTTCAGAAATTAGGCCGT	58.630	50.000	0.00	0.00	0.00	5.68
2501	2841	2.546778	CGCTTCAGAAATTAGGCCGTA	58.453	47.619	0.00	0.00	0.00	4.02
2502	2842	3.131396	CGCTTCAGAAATTAGGCCGTAT	58.869	45.455	0.00	0.00	0.00	3.06
2503	2843	3.184581	CGCTTCAGAAATTAGGCCGTATC	59.815	47.826	0.00	0.00	0.00	2.24
2504	2844	3.498777	GCTTCAGAAATTAGGCCGTATCC	59.501	47.826	0.00	0.00	0.00	2.59
2505	2845	3.380479	TCAGAAATTAGGCCGTATCCG	57.620	47.619	0.00	0.00	0.00	4.18
2506	2846	1.798813	CAGAAATTAGGCCGTATCCGC	59.201	52.381	0.00	0.00	0.00	5.54
2528	2868	3.983988	CGCTGCAGTATAACTTGATCGAT	59.016	43.478	16.64	0.00	0.00	3.59
2534	2874	7.489160	TGCAGTATAACTTGATCGATACACTT	58.511	34.615	0.00	0.00	0.00	3.16
2541	2881	3.349488	TGATCGATACACTTACCTGCG	57.651	47.619	0.00	0.00	0.00	5.18
2542	2882	2.052157	GATCGATACACTTACCTGCGC	58.948	52.381	0.00	0.00	0.00	6.09
2543	2883	0.101759	TCGATACACTTACCTGCGCC	59.898	55.000	4.18	0.00	0.00	6.53
2544	2884	0.102481	CGATACACTTACCTGCGCCT	59.898	55.000	4.18	0.00	0.00	5.52
2545	2885	1.335810	CGATACACTTACCTGCGCCTA	59.664	52.381	4.18	0.00	0.00	3.93
2546	2886	2.223641	CGATACACTTACCTGCGCCTAA	60.224	50.000	4.18	0.00	0.00	2.69
2547	2887	3.735820	CGATACACTTACCTGCGCCTAAA	60.736	47.826	4.18	0.00	0.00	1.85
2548	2888	2.554370	ACACTTACCTGCGCCTAAAA	57.446	45.000	4.18	0.00	0.00	1.52
2549	2889	2.423577	ACACTTACCTGCGCCTAAAAG	58.576	47.619	4.18	6.53	0.00	2.27
2550	2890	2.038033	ACACTTACCTGCGCCTAAAAGA	59.962	45.455	4.18	0.00	0.00	2.52
2551	2891	3.071479	CACTTACCTGCGCCTAAAAGAA	58.929	45.455	4.18	0.00	0.00	2.52
2552	2892	3.072211	ACTTACCTGCGCCTAAAAGAAC	58.928	45.455	4.18	0.00	0.00	3.01
2553	2893	2.843401	TACCTGCGCCTAAAAGAACA	57.157	45.000	4.18	0.00	0.00	3.18
2554	2894	2.200373	ACCTGCGCCTAAAAGAACAT	57.800	45.000	4.18	0.00	0.00	2.71
2555	2895	1.812571	ACCTGCGCCTAAAAGAACATG	59.187	47.619	4.18	0.00	0.00	3.21
2556	2896	2.083774	CCTGCGCCTAAAAGAACATGA	58.916	47.619	4.18	0.00	0.00	3.07
2557	2897	2.487762	CCTGCGCCTAAAAGAACATGAA	59.512	45.455	4.18	0.00	0.00	2.57
2558	2898	3.057596	CCTGCGCCTAAAAGAACATGAAA	60.058	43.478	4.18	0.00	0.00	2.69
2559	2899	4.159377	TGCGCCTAAAAGAACATGAAAG	57.841	40.909	4.18	0.00	0.00	2.62
2560	2900	2.917343	GCGCCTAAAAGAACATGAAAGC	59.083	45.455	0.00	0.00	0.00	3.51
2561	2901	3.611530	GCGCCTAAAAGAACATGAAAGCA	60.612	43.478	0.00	0.00	0.00	3.91
2562	2902	4.545610	CGCCTAAAAGAACATGAAAGCAA	58.454	39.130	0.00	0.00	0.00	3.91
2563	2903	4.618489	CGCCTAAAAGAACATGAAAGCAAG	59.382	41.667	0.00	0.00	0.00	4.01
2564	2904	4.925646	GCCTAAAAGAACATGAAAGCAAGG	59.074	41.667	0.00	0.00	0.00	3.61
2565	2905	5.473039	CCTAAAAGAACATGAAAGCAAGGG	58.527	41.667	0.00	0.00	0.00	3.95
2566	2906	5.011023	CCTAAAAGAACATGAAAGCAAGGGT	59.989	40.000	0.00	0.00	0.00	4.34
2567	2907	5.357742	AAAAGAACATGAAAGCAAGGGTT	57.642	34.783	0.00	0.00	0.00	4.11
2568	2908	5.357742	AAAGAACATGAAAGCAAGGGTTT	57.642	34.783	0.00	0.00	35.90	3.27
2569	2909	5.357742	AAGAACATGAAAGCAAGGGTTTT	57.642	34.783	0.00	0.00	33.25	2.43
2570	2910	5.357742	AGAACATGAAAGCAAGGGTTTTT	57.642	34.783	0.00	0.00	33.25	1.94
2571	2911	5.118286	AGAACATGAAAGCAAGGGTTTTTG	58.882	37.500	0.00	0.00	33.25	2.44
2572	2912	4.751767	ACATGAAAGCAAGGGTTTTTGA	57.248	36.364	0.00	0.00	33.25	2.69
2573	2913	5.096443	ACATGAAAGCAAGGGTTTTTGAA	57.904	34.783	0.00	0.00	33.25	2.69
2574	2914	5.495640	ACATGAAAGCAAGGGTTTTTGAAA	58.504	33.333	0.00	0.00	33.25	2.69
2575	2915	5.942826	ACATGAAAGCAAGGGTTTTTGAAAA	59.057	32.000	0.00	0.00	33.25	2.29
2576	2916	6.602803	ACATGAAAGCAAGGGTTTTTGAAAAT	59.397	30.769	0.00	0.00	33.25	1.82
2577	2917	6.434018	TGAAAGCAAGGGTTTTTGAAAATG	57.566	33.333	0.00	0.00	33.25	2.32
2578	2918	4.898829	AAGCAAGGGTTTTTGAAAATGC	57.101	36.364	5.34	5.34	32.94	3.56
2579	2919	4.155063	AGCAAGGGTTTTTGAAAATGCT	57.845	36.364	9.23	9.23	36.33	3.79
2580	2920	3.878699	AGCAAGGGTTTTTGAAAATGCTG	59.121	39.130	13.11	0.00	38.41	4.41
2581	2921	3.876320	GCAAGGGTTTTTGAAAATGCTGA	59.124	39.130	6.07	0.00	31.16	4.26
2582	2922	4.024641	GCAAGGGTTTTTGAAAATGCTGAG	60.025	41.667	6.07	0.00	31.16	3.35
2583	2923	5.358922	CAAGGGTTTTTGAAAATGCTGAGA	58.641	37.500	0.00	0.00	0.00	3.27
2584	2924	5.813513	AGGGTTTTTGAAAATGCTGAGAT	57.186	34.783	0.00	0.00	0.00	2.75
2585	2925	5.544650	AGGGTTTTTGAAAATGCTGAGATG	58.455	37.500	0.00	0.00	0.00	2.90
2586	2926	5.305128	AGGGTTTTTGAAAATGCTGAGATGA	59.695	36.000	0.00	0.00	0.00	2.92
2587	2927	5.406477	GGGTTTTTGAAAATGCTGAGATGAC	59.594	40.000	0.00	0.00	0.00	3.06
2588	2928	5.117592	GGTTTTTGAAAATGCTGAGATGACG	59.882	40.000	0.00	0.00	0.00	4.35
2589	2929	3.476295	TTGAAAATGCTGAGATGACGC	57.524	42.857	0.00	0.00	0.00	5.19
2590	2930	1.739466	TGAAAATGCTGAGATGACGCC	59.261	47.619	0.00	0.00	0.00	5.68
2591	2931	1.739466	GAAAATGCTGAGATGACGCCA	59.261	47.619	0.00	0.00	0.00	5.69
2592	2932	1.825090	AAATGCTGAGATGACGCCAA	58.175	45.000	0.00	0.00	0.00	4.52
2593	2933	1.376543	AATGCTGAGATGACGCCAAG	58.623	50.000	0.00	0.00	0.00	3.61
2594	2934	0.538584	ATGCTGAGATGACGCCAAGA	59.461	50.000	0.00	0.00	0.00	3.02
2595	2935	0.108472	TGCTGAGATGACGCCAAGAG	60.108	55.000	0.00	0.00	0.00	2.85
2596	2936	1.427592	GCTGAGATGACGCCAAGAGC	61.428	60.000	0.00	0.00	38.52	4.09
2597	2937	0.809241	CTGAGATGACGCCAAGAGCC	60.809	60.000	0.00	0.00	38.78	4.70
2598	2938	1.260538	TGAGATGACGCCAAGAGCCT	61.261	55.000	0.00	0.00	38.78	4.58
2599	2939	0.107945	GAGATGACGCCAAGAGCCTT	60.108	55.000	0.00	0.00	38.78	4.35
2600	2940	0.392193	AGATGACGCCAAGAGCCTTG	60.392	55.000	7.69	7.69	38.78	3.61
2601	2941	1.372087	GATGACGCCAAGAGCCTTGG	61.372	60.000	22.63	22.63	42.37	3.61
2602	2942	2.032681	GACGCCAAGAGCCTTGGT	59.967	61.111	25.51	13.43	41.53	3.67
2605	2945	4.500265	GCCAAGAGCCTTGGTGAA	57.500	55.556	25.51	0.00	41.53	3.18
2606	2946	2.967270	GCCAAGAGCCTTGGTGAAT	58.033	52.632	25.51	0.00	41.53	2.57
2607	2947	0.813821	GCCAAGAGCCTTGGTGAATC	59.186	55.000	25.51	11.81	41.53	2.52
2608	2948	1.615384	GCCAAGAGCCTTGGTGAATCT	60.615	52.381	25.51	0.00	41.53	2.40
2609	2949	2.363683	CCAAGAGCCTTGGTGAATCTC	58.636	52.381	20.06	0.00	34.92	2.75
2610	2950	2.290514	CCAAGAGCCTTGGTGAATCTCA	60.291	50.000	20.06	0.00	34.92	3.27
2611	2951	3.618351	CAAGAGCCTTGGTGAATCTCAT	58.382	45.455	6.96	0.00	0.00	2.90
2612	2952	4.015084	CAAGAGCCTTGGTGAATCTCATT	58.985	43.478	6.96	0.00	0.00	2.57
2613	2953	3.883669	AGAGCCTTGGTGAATCTCATTC	58.116	45.455	0.00	0.00	39.70	2.67
2614	2954	3.265221	AGAGCCTTGGTGAATCTCATTCA	59.735	43.478	0.00	0.00	46.30	2.57
2628	2968	9.511272	TGAATCTCATTCAAGAAGATTTCAAGA	57.489	29.630	0.00	0.00	45.57	3.02
2631	2971	7.759465	TCTCATTCAAGAAGATTTCAAGATGC	58.241	34.615	0.00	0.00	0.00	3.91
2632	2972	7.610692	TCTCATTCAAGAAGATTTCAAGATGCT	59.389	33.333	0.00	0.00	0.00	3.79
2633	2973	7.759465	TCATTCAAGAAGATTTCAAGATGCTC	58.241	34.615	0.00	0.00	0.00	4.26
2634	2974	7.392393	TCATTCAAGAAGATTTCAAGATGCTCA	59.608	33.333	0.00	0.00	0.00	4.26
2635	2975	7.514784	TTCAAGAAGATTTCAAGATGCTCAA	57.485	32.000	0.00	0.00	0.00	3.02
2636	2976	6.906659	TCAAGAAGATTTCAAGATGCTCAAC	58.093	36.000	0.00	0.00	0.00	3.18
2637	2977	5.542616	AGAAGATTTCAAGATGCTCAACG	57.457	39.130	0.00	0.00	0.00	4.10
2638	2978	5.240891	AGAAGATTTCAAGATGCTCAACGA	58.759	37.500	0.00	0.00	0.00	3.85
2639	2979	5.350914	AGAAGATTTCAAGATGCTCAACGAG	59.649	40.000	0.00	0.00	0.00	4.18
2640	2980	3.937706	AGATTTCAAGATGCTCAACGAGG	59.062	43.478	0.00	0.00	0.00	4.63
2641	2981	1.442769	TTCAAGATGCTCAACGAGGC	58.557	50.000	0.00	0.00	0.00	4.70
2642	2982	0.391661	TCAAGATGCTCAACGAGGCC	60.392	55.000	0.00	0.00	0.00	5.19
2643	2983	0.392193	CAAGATGCTCAACGAGGCCT	60.392	55.000	3.86	3.86	0.00	5.19
2644	2984	0.326264	AAGATGCTCAACGAGGCCTT	59.674	50.000	6.77	0.00	0.00	4.35
2645	2985	0.107945	AGATGCTCAACGAGGCCTTC	60.108	55.000	6.77	0.00	0.00	3.46
2646	2986	1.078143	ATGCTCAACGAGGCCTTCC	60.078	57.895	6.77	0.00	0.00	3.46
2647	2987	2.815647	GCTCAACGAGGCCTTCCG	60.816	66.667	6.77	9.99	37.47	4.30
2648	2988	2.657237	CTCAACGAGGCCTTCCGT	59.343	61.111	13.40	13.40	41.14	4.69
2649	2989	1.446272	CTCAACGAGGCCTTCCGTC	60.446	63.158	18.74	0.00	38.13	4.79
2650	2990	2.434359	CAACGAGGCCTTCCGTCC	60.434	66.667	18.74	0.00	38.13	4.79
2651	2991	2.603776	AACGAGGCCTTCCGTCCT	60.604	61.111	18.74	2.86	38.13	3.85
2652	2992	2.214920	AACGAGGCCTTCCGTCCTT	61.215	57.895	18.74	2.16	38.13	3.36
2653	2993	2.168666	AACGAGGCCTTCCGTCCTTC	62.169	60.000	18.74	0.00	38.13	3.46
2654	2994	2.585153	GAGGCCTTCCGTCCTTCC	59.415	66.667	6.77	0.00	37.47	3.46
2655	2995	2.203938	AGGCCTTCCGTCCTTCCA	60.204	61.111	0.00	0.00	37.47	3.53
2656	2996	1.616628	AGGCCTTCCGTCCTTCCAT	60.617	57.895	0.00	0.00	37.47	3.41
2657	2997	1.208165	AGGCCTTCCGTCCTTCCATT	61.208	55.000	0.00	0.00	37.47	3.16
2658	2998	0.748367	GGCCTTCCGTCCTTCCATTC	60.748	60.000	0.00	0.00	0.00	2.67
2659	2999	0.035439	GCCTTCCGTCCTTCCATTCA	60.035	55.000	0.00	0.00	0.00	2.57
2660	3000	2.014068	GCCTTCCGTCCTTCCATTCAG	61.014	57.143	0.00	0.00	0.00	3.02
2661	3001	1.407437	CCTTCCGTCCTTCCATTCAGG	60.407	57.143	0.00	0.00	39.47	3.86
2662	3002	1.279271	CTTCCGTCCTTCCATTCAGGT	59.721	52.381	0.00	0.00	39.02	4.00
2663	3003	0.613260	TCCGTCCTTCCATTCAGGTG	59.387	55.000	0.00	0.00	39.02	4.00
2664	3004	0.392998	CCGTCCTTCCATTCAGGTGG	60.393	60.000	0.00	0.00	40.76	4.61
2665	3005	1.026718	CGTCCTTCCATTCAGGTGGC	61.027	60.000	0.00	0.00	39.19	5.01
2666	3006	0.329596	GTCCTTCCATTCAGGTGGCT	59.670	55.000	0.00	0.00	39.19	4.75
2667	3007	0.329261	TCCTTCCATTCAGGTGGCTG	59.671	55.000	0.00	0.00	39.19	4.85
2668	3008	0.682209	CCTTCCATTCAGGTGGCTGG	60.682	60.000	0.00	0.00	39.19	4.85
2669	3009	0.682209	CTTCCATTCAGGTGGCTGGG	60.682	60.000	0.00	0.00	39.19	4.45
2670	3010	1.434513	TTCCATTCAGGTGGCTGGGT	61.435	55.000	0.00	0.00	39.19	4.51
2671	3011	0.548926	TCCATTCAGGTGGCTGGGTA	60.549	55.000	0.00	0.00	39.19	3.69
2672	3012	0.107017	CCATTCAGGTGGCTGGGTAG	60.107	60.000	0.00	0.00	31.43	3.18
2673	3013	0.107017	CATTCAGGTGGCTGGGTAGG	60.107	60.000	0.00	0.00	0.00	3.18
2674	3014	0.253160	ATTCAGGTGGCTGGGTAGGA	60.253	55.000	0.00	0.00	0.00	2.94
2675	3015	0.474854	TTCAGGTGGCTGGGTAGGAA	60.475	55.000	0.00	0.00	0.00	3.36
2676	3016	1.198759	TCAGGTGGCTGGGTAGGAAC	61.199	60.000	0.00	0.00	0.00	3.62
2677	3017	1.151899	AGGTGGCTGGGTAGGAACA	60.152	57.895	0.00	0.00	0.00	3.18
2678	3018	1.201429	AGGTGGCTGGGTAGGAACAG	61.201	60.000	0.00	0.00	37.76	3.16
2679	3019	1.299976	GTGGCTGGGTAGGAACAGG	59.700	63.158	0.00	0.00	35.30	4.00
2680	3020	1.923395	TGGCTGGGTAGGAACAGGG	60.923	63.158	0.00	0.00	35.30	4.45
2681	3021	1.923909	GGCTGGGTAGGAACAGGGT	60.924	63.158	0.00	0.00	35.30	4.34
2682	3022	1.299976	GCTGGGTAGGAACAGGGTG	59.700	63.158	0.00	0.00	35.30	4.61
2683	3023	1.489560	GCTGGGTAGGAACAGGGTGT	61.490	60.000	0.00	0.00	35.30	4.16
2684	3024	1.946984	CTGGGTAGGAACAGGGTGTA	58.053	55.000	0.00	0.00	0.00	2.90
2685	3025	1.831736	CTGGGTAGGAACAGGGTGTAG	59.168	57.143	0.00	0.00	0.00	2.74
2686	3026	1.201424	GGGTAGGAACAGGGTGTAGG	58.799	60.000	0.00	0.00	0.00	3.18
2687	3027	1.273438	GGGTAGGAACAGGGTGTAGGA	60.273	57.143	0.00	0.00	0.00	2.94
2688	3028	2.628829	GGGTAGGAACAGGGTGTAGGAT	60.629	54.545	0.00	0.00	0.00	3.24
2689	3029	2.434702	GGTAGGAACAGGGTGTAGGATG	59.565	54.545	0.00	0.00	0.00	3.51
2690	3030	1.584724	AGGAACAGGGTGTAGGATGG	58.415	55.000	0.00	0.00	0.00	3.51
2691	3031	1.203440	AGGAACAGGGTGTAGGATGGT	60.203	52.381	0.00	0.00	0.00	3.55
2692	3032	1.065418	GGAACAGGGTGTAGGATGGTG	60.065	57.143	0.00	0.00	0.00	4.17
2693	3033	1.628846	GAACAGGGTGTAGGATGGTGT	59.371	52.381	0.00	0.00	0.00	4.16
2694	3034	1.276622	ACAGGGTGTAGGATGGTGTC	58.723	55.000	0.00	0.00	0.00	3.67
2695	3035	1.203313	ACAGGGTGTAGGATGGTGTCT	60.203	52.381	0.00	0.00	0.00	3.41
2696	3036	1.909302	CAGGGTGTAGGATGGTGTCTT	59.091	52.381	0.00	0.00	0.00	3.01
2697	3037	2.093447	CAGGGTGTAGGATGGTGTCTTC	60.093	54.545	0.00	0.00	0.00	2.87
2698	3038	2.188817	GGGTGTAGGATGGTGTCTTCT	58.811	52.381	0.00	0.00	0.00	2.85
2699	3039	2.572104	GGGTGTAGGATGGTGTCTTCTT	59.428	50.000	0.00	0.00	0.00	2.52
2700	3040	3.009143	GGGTGTAGGATGGTGTCTTCTTT	59.991	47.826	0.00	0.00	0.00	2.52
2701	3041	4.506802	GGGTGTAGGATGGTGTCTTCTTTT	60.507	45.833	0.00	0.00	0.00	2.27
2702	3042	5.070685	GGTGTAGGATGGTGTCTTCTTTTT	58.929	41.667	0.00	0.00	0.00	1.94
2725	3065	8.764524	TTTTTATCTCTGTAGCTCTCTGTTTC	57.235	34.615	0.00	0.00	0.00	2.78
2726	3066	7.468141	TTTATCTCTGTAGCTCTCTGTTTCA	57.532	36.000	0.00	0.00	0.00	2.69
2727	3067	5.991933	ATCTCTGTAGCTCTCTGTTTCAA	57.008	39.130	0.00	0.00	0.00	2.69
2728	3068	5.384063	TCTCTGTAGCTCTCTGTTTCAAG	57.616	43.478	0.00	0.00	0.00	3.02
2729	3069	5.073428	TCTCTGTAGCTCTCTGTTTCAAGA	58.927	41.667	0.00	0.00	0.00	3.02
2730	3070	5.182950	TCTCTGTAGCTCTCTGTTTCAAGAG	59.817	44.000	0.00	0.00	44.34	2.85
2739	3079	6.851222	TCTCTGTTTCAAGAGCTAGTTTTG	57.149	37.500	0.00	0.00	42.95	2.44
2740	3080	6.349300	TCTCTGTTTCAAGAGCTAGTTTTGT	58.651	36.000	0.00	0.00	42.95	2.83
2741	3081	6.480320	TCTCTGTTTCAAGAGCTAGTTTTGTC	59.520	38.462	0.00	0.00	42.95	3.18
2742	3082	6.349300	TCTGTTTCAAGAGCTAGTTTTGTCT	58.651	36.000	0.00	0.00	0.00	3.41
2743	3083	6.823689	TCTGTTTCAAGAGCTAGTTTTGTCTT	59.176	34.615	0.00	0.00	0.00	3.01
2744	3084	7.011482	TCTGTTTCAAGAGCTAGTTTTGTCTTC	59.989	37.037	0.00	0.00	0.00	2.87
2745	3085	5.907197	TTCAAGAGCTAGTTTTGTCTTCG	57.093	39.130	0.00	0.00	0.00	3.79
2746	3086	4.307432	TCAAGAGCTAGTTTTGTCTTCGG	58.693	43.478	0.00	0.00	0.00	4.30
2747	3087	4.058817	CAAGAGCTAGTTTTGTCTTCGGT	58.941	43.478	0.00	0.00	0.00	4.69
2748	3088	4.338379	AGAGCTAGTTTTGTCTTCGGTT	57.662	40.909	0.00	0.00	0.00	4.44
2749	3089	4.308265	AGAGCTAGTTTTGTCTTCGGTTC	58.692	43.478	0.00	0.00	0.00	3.62
2750	3090	3.057734	AGCTAGTTTTGTCTTCGGTTCG	58.942	45.455	0.00	0.00	0.00	3.95
2751	3091	2.798847	GCTAGTTTTGTCTTCGGTTCGT	59.201	45.455	0.00	0.00	0.00	3.85
2752	3092	3.362693	GCTAGTTTTGTCTTCGGTTCGTG	60.363	47.826	0.00	0.00	0.00	4.35
2753	3093	1.937899	AGTTTTGTCTTCGGTTCGTGG	59.062	47.619	0.00	0.00	0.00	4.94
2754	3094	1.003223	GTTTTGTCTTCGGTTCGTGGG	60.003	52.381	0.00	0.00	0.00	4.61
2755	3095	0.533308	TTTGTCTTCGGTTCGTGGGG	60.533	55.000	0.00	0.00	0.00	4.96
2756	3096	2.741211	GTCTTCGGTTCGTGGGGC	60.741	66.667	0.00	0.00	0.00	5.80
2757	3097	3.235481	TCTTCGGTTCGTGGGGCA	61.235	61.111	0.00	0.00	0.00	5.36
2758	3098	3.047877	CTTCGGTTCGTGGGGCAC	61.048	66.667	0.00	0.00	0.00	5.01
2759	3099	3.530910	CTTCGGTTCGTGGGGCACT	62.531	63.158	0.00	0.00	31.34	4.40
2760	3100	3.109592	TTCGGTTCGTGGGGCACTT	62.110	57.895	0.00	0.00	31.34	3.16
2761	3101	2.593436	CGGTTCGTGGGGCACTTT	60.593	61.111	0.00	0.00	31.34	2.66
2762	3102	2.190841	CGGTTCGTGGGGCACTTTT	61.191	57.895	0.00	0.00	31.34	2.27
2763	3103	1.362355	GGTTCGTGGGGCACTTTTG	59.638	57.895	0.00	0.00	31.34	2.44
2772	3112	3.981308	GCACTTTTGCCGCCTCTA	58.019	55.556	0.00	0.00	43.66	2.43
2773	3113	1.502190	GCACTTTTGCCGCCTCTAC	59.498	57.895	0.00	0.00	43.66	2.59
2774	3114	1.923227	GCACTTTTGCCGCCTCTACC	61.923	60.000	0.00	0.00	43.66	3.18
2775	3115	0.605319	CACTTTTGCCGCCTCTACCA	60.605	55.000	0.00	0.00	0.00	3.25
2776	3116	0.321653	ACTTTTGCCGCCTCTACCAG	60.322	55.000	0.00	0.00	0.00	4.00
2777	3117	0.321653	CTTTTGCCGCCTCTACCAGT	60.322	55.000	0.00	0.00	0.00	4.00
2778	3118	0.978151	TTTTGCCGCCTCTACCAGTA	59.022	50.000	0.00	0.00	0.00	2.74
2779	3119	0.248289	TTTGCCGCCTCTACCAGTAC	59.752	55.000	0.00	0.00	0.00	2.73
2780	3120	1.610554	TTGCCGCCTCTACCAGTACC	61.611	60.000	0.00	0.00	0.00	3.34
2781	3121	2.056223	GCCGCCTCTACCAGTACCA	61.056	63.158	0.00	0.00	0.00	3.25
2782	3122	1.400530	GCCGCCTCTACCAGTACCAT	61.401	60.000	0.00	0.00	0.00	3.55
2783	3123	0.389391	CCGCCTCTACCAGTACCATG	59.611	60.000	0.00	0.00	0.00	3.66
2784	3124	1.112113	CGCCTCTACCAGTACCATGT	58.888	55.000	0.00	0.00	0.00	3.21
2785	3125	2.304092	CGCCTCTACCAGTACCATGTA	58.696	52.381	0.00	0.00	0.00	2.29
2786	3126	2.691526	CGCCTCTACCAGTACCATGTAA	59.308	50.000	0.00	0.00	0.00	2.41
2787	3127	3.490419	CGCCTCTACCAGTACCATGTAAC	60.490	52.174	0.00	0.00	0.00	2.50
2788	3128	3.705072	GCCTCTACCAGTACCATGTAACT	59.295	47.826	0.00	0.00	0.00	2.24
2789	3129	4.161754	GCCTCTACCAGTACCATGTAACTT	59.838	45.833	0.00	0.00	0.00	2.66
2790	3130	5.338137	GCCTCTACCAGTACCATGTAACTTT	60.338	44.000	0.00	0.00	0.00	2.66
2791	3131	6.127253	GCCTCTACCAGTACCATGTAACTTTA	60.127	42.308	0.00	0.00	0.00	1.85
2792	3132	7.418712	GCCTCTACCAGTACCATGTAACTTTAT	60.419	40.741	0.00	0.00	0.00	1.40
2793	3133	9.139734	CCTCTACCAGTACCATGTAACTTTATA	57.860	37.037	0.00	0.00	0.00	0.98
2798	3138	8.648693	ACCAGTACCATGTAACTTTATATCTCC	58.351	37.037	0.00	0.00	0.00	3.71
2799	3139	8.871125	CCAGTACCATGTAACTTTATATCTCCT	58.129	37.037	0.00	0.00	0.00	3.69
2803	3143	8.792830	ACCATGTAACTTTATATCTCCTACCA	57.207	34.615	0.00	0.00	0.00	3.25
2804	3144	9.393786	ACCATGTAACTTTATATCTCCTACCAT	57.606	33.333	0.00	0.00	0.00	3.55
2805	3145	9.877178	CCATGTAACTTTATATCTCCTACCATC	57.123	37.037	0.00	0.00	0.00	3.51
2818	3158	7.009179	TCTCCTACCATCTATAATGCAAAGG	57.991	40.000	0.00	0.00	0.00	3.11
2819	3159	5.560724	TCCTACCATCTATAATGCAAAGGC	58.439	41.667	0.00	0.00	41.68	4.35
2829	3169	3.588336	GCAAAGGCAGAGCTCCTG	58.412	61.111	10.93	9.35	45.67	3.86
2840	3180	4.177229	GCTCCTGCTGTTCTCGTC	57.823	61.111	0.00	0.00	36.03	4.20
2841	3181	1.290324	GCTCCTGCTGTTCTCGTCA	59.710	57.895	0.00	0.00	36.03	4.35
2842	3182	0.319900	GCTCCTGCTGTTCTCGTCAA	60.320	55.000	0.00	0.00	36.03	3.18
2843	3183	1.873903	GCTCCTGCTGTTCTCGTCAAA	60.874	52.381	0.00	0.00	36.03	2.69
2844	3184	2.483876	CTCCTGCTGTTCTCGTCAAAA	58.516	47.619	0.00	0.00	0.00	2.44
2845	3185	2.872245	CTCCTGCTGTTCTCGTCAAAAA	59.128	45.455	0.00	0.00	0.00	1.94
2893	3233	7.288621	TGATCAGAAATATGAGGAGCTACTGAA	59.711	37.037	0.99	0.00	35.92	3.02
2897	3237	7.930325	CAGAAATATGAGGAGCTACTGAATGAA	59.070	37.037	0.99	0.00	0.00	2.57
2898	3238	8.658619	AGAAATATGAGGAGCTACTGAATGAAT	58.341	33.333	0.99	0.00	0.00	2.57
2899	3239	8.618702	AAATATGAGGAGCTACTGAATGAATG	57.381	34.615	0.99	0.00	0.00	2.67
2999	3339	2.908015	GGCCAATCAGCCGACCTA	59.092	61.111	0.00	0.00	44.57	3.08
3034	3378	5.011533	AGGTGATCTACTGCTAATCCATCAC	59.988	44.000	0.00	0.00	38.51	3.06
3042	3389	4.133078	CTGCTAATCCATCACCTCCTTTC	58.867	47.826	0.00	0.00	0.00	2.62
3046	3393	1.361204	TCCATCACCTCCTTTCAGCA	58.639	50.000	0.00	0.00	0.00	4.41
3065	3412	2.490903	GCATCAGCATTTCCACTGTTCT	59.509	45.455	0.00	0.00	41.58	3.01
3066	3413	3.057033	GCATCAGCATTTCCACTGTTCTT	60.057	43.478	0.00	0.00	41.58	2.52
3067	3414	4.560108	GCATCAGCATTTCCACTGTTCTTT	60.560	41.667	0.00	0.00	41.58	2.52
3068	3415	5.535333	CATCAGCATTTCCACTGTTCTTTT	58.465	37.500	0.00	0.00	35.37	2.27
3069	3416	5.186996	TCAGCATTTCCACTGTTCTTTTC	57.813	39.130	0.00	0.00	35.37	2.29
3070	3417	4.037923	TCAGCATTTCCACTGTTCTTTTCC	59.962	41.667	0.00	0.00	35.37	3.13
3205	3556	1.003355	AGATGGGCGGTGAGTTGTG	60.003	57.895	0.00	0.00	0.00	3.33
3206	3557	1.003839	GATGGGCGGTGAGTTGTGA	60.004	57.895	0.00	0.00	0.00	3.58
3211	3579	0.249398	GGCGGTGAGTTGTGATACCT	59.751	55.000	0.00	0.00	0.00	3.08
3231	3599	3.003793	CCTATCGTCTCATTCTGAAGCGA	59.996	47.826	0.00	1.95	37.15	4.93
3233	3601	2.868662	TCGTCTCATTCTGAAGCGAAG	58.131	47.619	0.00	0.00	32.54	3.79
3234	3602	2.229062	TCGTCTCATTCTGAAGCGAAGT	59.771	45.455	0.00	0.00	32.54	3.01
3266	3634	5.633830	AGAGAAAACCTGTTGCATACATG	57.366	39.130	0.00	0.00	35.85	3.21
3289	3673	2.267351	TGTTGGGCTGATGCAACGG	61.267	57.895	0.00	0.00	41.91	4.44
3323	3707	1.702182	TTTTGCAGGTCCTGATTGCA	58.298	45.000	23.77	11.32	45.28	4.08
3356	3740	3.267597	GAACAACAAGGCGGCGCAT	62.268	57.895	34.36	26.23	0.00	4.73
3359	3743	2.751436	AACAAGGCGGCGCATGAT	60.751	55.556	33.50	23.66	0.00	2.45
3445	3836	4.196971	GCCTCCTGATTACGGTGTAATTT	58.803	43.478	3.90	0.00	0.00	1.82
3449	3840	7.046033	CCTCCTGATTACGGTGTAATTTAACT	58.954	38.462	3.90	0.00	0.00	2.24
3452	3843	8.095792	TCCTGATTACGGTGTAATTTAACTTGA	58.904	33.333	3.90	0.00	0.00	3.02
3456	3847	8.611654	ATTACGGTGTAATTTAACTTGAGTGT	57.388	30.769	0.00	0.00	0.00	3.55
3482	3874	9.326489	TCCTAACATGGTTGAGATAGCTATATT	57.674	33.333	6.13	0.00	0.00	1.28
3483	3875	9.376075	CCTAACATGGTTGAGATAGCTATATTG	57.624	37.037	6.13	0.04	0.00	1.90
3489	3888	8.250143	TGGTTGAGATAGCTATATTGTTGAGA	57.750	34.615	6.13	0.00	0.00	3.27
3490	3889	8.704668	TGGTTGAGATAGCTATATTGTTGAGAA	58.295	33.333	6.13	0.00	0.00	2.87
3535	3934	4.334481	TGAAAGGAACGGTGTTCTTTTCTC	59.666	41.667	30.19	17.42	41.86	2.87
3536	3935	3.840124	AGGAACGGTGTTCTTTTCTCT	57.160	42.857	9.32	0.00	0.00	3.10
3537	3936	3.729966	AGGAACGGTGTTCTTTTCTCTC	58.270	45.455	9.32	0.00	0.00	3.20
3539	3938	3.741856	GGAACGGTGTTCTTTTCTCTCTC	59.258	47.826	9.32	0.00	0.00	3.20
3540	3939	4.501743	GGAACGGTGTTCTTTTCTCTCTCT	60.502	45.833	9.32	0.00	0.00	3.10
3541	3940	4.245845	ACGGTGTTCTTTTCTCTCTCTC	57.754	45.455	0.00	0.00	0.00	3.20
3542	3941	3.892588	ACGGTGTTCTTTTCTCTCTCTCT	59.107	43.478	0.00	0.00	0.00	3.10
3544	3943	4.217550	CGGTGTTCTTTTCTCTCTCTCTCT	59.782	45.833	0.00	0.00	0.00	3.10
3545	3944	5.469479	GGTGTTCTTTTCTCTCTCTCTCTG	58.531	45.833	0.00	0.00	0.00	3.35
3546	3945	5.010617	GGTGTTCTTTTCTCTCTCTCTCTGT	59.989	44.000	0.00	0.00	0.00	3.41
3547	3946	6.149633	GTGTTCTTTTCTCTCTCTCTCTGTC	58.850	44.000	0.00	0.00	0.00	3.51
3550	3960	4.935205	TCTTTTCTCTCTCTCTCTGTCTCG	59.065	45.833	0.00	0.00	0.00	4.04
3564	3974	2.673368	CTGTCTCGGTGCCAAACTATTC	59.327	50.000	0.00	0.00	0.00	1.75
3566	3976	3.270877	GTCTCGGTGCCAAACTATTCAT	58.729	45.455	0.00	0.00	0.00	2.57
3569	3979	3.006940	TCGGTGCCAAACTATTCATCAC	58.993	45.455	0.00	0.00	0.00	3.06
3576	3986	5.647658	TGCCAAACTATTCATCACTAGTTGG	59.352	40.000	0.00	0.00	38.02	3.77
3577	3987	5.648092	GCCAAACTATTCATCACTAGTTGGT	59.352	40.000	0.00	0.00	38.02	3.67
3603	4017	1.336887	CGTCCCTCGACAGTCAACATT	60.337	52.381	0.41	0.00	42.86	2.71
3636	4050	3.728845	ACGCTGACTCAAGTTTGTACAT	58.271	40.909	0.00	0.00	0.00	2.29
3679	4112	0.098200	CATGCATGCAGTGGAAGTCG	59.902	55.000	26.69	1.90	0.00	4.18
3681	4114	0.671472	TGCATGCAGTGGAAGTCGAG	60.671	55.000	18.46	0.00	0.00	4.04
3692	4125	1.468914	GGAAGTCGAGGGCACAATTTC	59.531	52.381	0.00	0.00	0.00	2.17
3696	4129	0.320374	TCGAGGGCACAATTTCGTCT	59.680	50.000	0.00	0.00	34.83	4.18
3697	4130	0.443869	CGAGGGCACAATTTCGTCTG	59.556	55.000	0.00	0.00	0.00	3.51
3698	4131	0.169009	GAGGGCACAATTTCGTCTGC	59.831	55.000	0.00	0.00	0.00	4.26
3699	4132	0.537143	AGGGCACAATTTCGTCTGCA	60.537	50.000	0.00	0.00	0.00	4.41
3700	4133	0.387239	GGGCACAATTTCGTCTGCAC	60.387	55.000	0.00	0.00	0.00	4.57
3701	4134	0.387239	GGCACAATTTCGTCTGCACC	60.387	55.000	0.00	0.00	0.00	5.01
3702	4135	0.387239	GCACAATTTCGTCTGCACCC	60.387	55.000	0.00	0.00	0.00	4.61
3703	4136	1.238439	CACAATTTCGTCTGCACCCT	58.762	50.000	0.00	0.00	0.00	4.34
3705	4138	0.443869	CAATTTCGTCTGCACCCTCG	59.556	55.000	0.00	0.00	0.00	4.63
3706	4139	1.298859	AATTTCGTCTGCACCCTCGC	61.299	55.000	0.00	0.00	0.00	5.03
3707	4140	2.449031	ATTTCGTCTGCACCCTCGCA	62.449	55.000	0.00	0.00	40.32	5.10
3708	4141	2.652382	TTTCGTCTGCACCCTCGCAA	62.652	55.000	0.00	0.00	42.45	4.85
3709	4142	3.414700	CGTCTGCACCCTCGCAAC	61.415	66.667	0.00	0.00	42.45	4.17
3711	4144	1.672356	GTCTGCACCCTCGCAACAT	60.672	57.895	0.00	0.00	42.45	2.71
3713	4146	0.955428	TCTGCACCCTCGCAACATTC	60.955	55.000	0.00	0.00	42.45	2.67
3714	4147	1.228094	TGCACCCTCGCAACATTCA	60.228	52.632	0.00	0.00	39.45	2.57
3715	4148	1.236616	TGCACCCTCGCAACATTCAG	61.237	55.000	0.00	0.00	39.45	3.02
3716	4149	1.237285	GCACCCTCGCAACATTCAGT	61.237	55.000	0.00	0.00	0.00	3.41
3721	4190	3.074412	CCCTCGCAACATTCAGTTACTT	58.926	45.455	0.00	0.00	38.74	2.24
3729	4198	6.147164	CGCAACATTCAGTTACTTTTCCTAGA	59.853	38.462	0.00	0.00	38.74	2.43
3764	4233	3.389221	CCCCAATGGTTTCGAAAAACAG	58.611	45.455	13.10	4.46	45.44	3.16
3766	4235	4.262420	CCCCAATGGTTTCGAAAAACAGAT	60.262	41.667	13.10	5.77	45.44	2.90
3767	4236	4.685628	CCCAATGGTTTCGAAAAACAGATG	59.314	41.667	13.10	15.68	45.44	2.90
3768	4237	4.150451	CCAATGGTTTCGAAAAACAGATGC	59.850	41.667	13.10	0.00	45.44	3.91
3775	4253	1.068748	CGAAAAACAGATGCTGCTGCT	60.069	47.619	17.00	2.26	39.51	4.24
3794	4286	5.579511	GCTGCTGCTCAAATAAAATGACAAT	59.420	36.000	8.53	0.00	36.03	2.71
3800	4292	8.692110	TGCTCAAATAAAATGACAATGATGAC	57.308	30.769	0.00	0.00	0.00	3.06
3820	4317	9.573133	TGATGACACATCGCATAATAATACTAG	57.427	33.333	7.14	0.00	0.00	2.57
3950	4497	9.571816	ACTTAAGGTAGTAGTACTCCATCATAC	57.428	37.037	5.96	0.00	0.00	2.39
3951	4498	9.796180	CTTAAGGTAGTAGTACTCCATCATACT	57.204	37.037	5.96	0.00	35.76	2.12
3995	4544	2.430332	CACAGAAAACCCTCAAAGGCAA	59.570	45.455	0.00	0.00	32.73	4.52
4007	4556	2.878406	TCAAAGGCAAAAAGAGACTCCG	59.122	45.455	0.00	0.00	0.00	4.63
4019	4568	2.025793	AGAGACTCCGGATGAACAGAGA	60.026	50.000	3.57	0.00	0.00	3.10
4020	4569	2.955660	GAGACTCCGGATGAACAGAGAT	59.044	50.000	3.57	0.00	0.00	2.75
4021	4570	2.955660	AGACTCCGGATGAACAGAGATC	59.044	50.000	3.57	0.00	0.00	2.75
4022	4571	2.955660	GACTCCGGATGAACAGAGATCT	59.044	50.000	3.57	0.00	0.00	2.75
4061	4617	3.403968	CATGGCATCCATCTCTGAAGAG	58.596	50.000	0.00	0.58	43.15	2.85
4094	4650	2.202440	CAGTTGCAGCAGCGATGC	60.202	61.111	19.88	19.88	45.81	3.91
4143	4932	2.793278	TACTATCATCATGCGCACGT	57.207	45.000	14.90	0.00	0.00	4.49
4183	4972	4.931601	AGCCGTATCGTATCGTATCTACAA	59.068	41.667	0.00	0.00	0.00	2.41
4212	5001	3.114616	GCATCTGCGTCTGTGCGT	61.115	61.111	0.00	0.00	37.81	5.24
4213	5002	2.774126	CATCTGCGTCTGTGCGTG	59.226	61.111	0.00	0.00	37.81	5.34

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
83	90	1.668419	GTCCATGTGTAGGTGATGGC	58.332	55.000	0.00	0.00	37.20	4.40
194	201	3.016736	ACGGGATGATTTTGATGGTGTC	58.983	45.455	0.00	0.00	0.00	3.67
201	208	1.352687	TGGGTCACGGGATGATTTTGA	59.647	47.619	0.00	0.00	40.28	2.69
206	213	0.695924	TGTTTGGGTCACGGGATGAT	59.304	50.000	0.00	0.00	40.28	2.45
226	233	4.792521	TTGATTAAATTCCCACCCGTTG	57.207	40.909	0.00	0.00	0.00	4.10
227	234	4.589374	TGTTTGATTAAATTCCCACCCGTT	59.411	37.500	0.00	0.00	0.00	4.44
229	236	4.219725	ACTGTTTGATTAAATTCCCACCCG	59.780	41.667	0.00	0.00	0.00	5.28
230	237	5.738619	ACTGTTTGATTAAATTCCCACCC	57.261	39.130	0.00	0.00	0.00	4.61
231	238	6.330278	GCTACTGTTTGATTAAATTCCCACC	58.670	40.000	0.00	0.00	0.00	4.61
232	239	6.330278	GGCTACTGTTTGATTAAATTCCCAC	58.670	40.000	0.00	0.00	0.00	4.61
233	240	5.124776	CGGCTACTGTTTGATTAAATTCCCA	59.875	40.000	0.00	0.00	0.00	4.37
234	241	5.578776	CGGCTACTGTTTGATTAAATTCCC	58.421	41.667	0.00	0.00	0.00	3.97
269	276	4.543736	CATTCGTCTCGCGCACGC	62.544	66.667	21.27	4.64	41.07	5.34
270	277	3.902063	CCATTCGTCTCGCGCACG	61.902	66.667	20.37	20.37	41.07	5.34
271	278	4.210304	GCCATTCGTCTCGCGCAC	62.210	66.667	8.75	0.00	41.07	5.34
277	284	4.814294	ACGGCCGCCATTCGTCTC	62.814	66.667	28.58	0.00	36.19	3.36
700	760	1.529309	GTCTTCCTCTGCCCCATCC	59.471	63.158	0.00	0.00	0.00	3.51
703	763	3.003173	CCGTCTTCCTCTGCCCCA	61.003	66.667	0.00	0.00	0.00	4.96
708	768	1.893786	CCCACTCCGTCTTCCTCTG	59.106	63.158	0.00	0.00	0.00	3.35
720	780	3.728373	AATCCCCACGGCCCACTC	61.728	66.667	0.00	0.00	0.00	3.51
807	872	4.560856	ATGCCGTCTCTCGCTCGC	62.561	66.667	0.00	0.00	38.35	5.03
808	873	1.078759	AAAATGCCGTCTCTCGCTCG	61.079	55.000	0.00	0.00	38.35	5.03
809	874	0.647925	GAAAATGCCGTCTCTCGCTC	59.352	55.000	0.00	0.00	38.35	5.03
810	875	1.078759	CGAAAATGCCGTCTCTCGCT	61.079	55.000	0.00	0.00	38.35	4.93
884	961	1.126846	GCTTCAGTTTGATCCGACACG	59.873	52.381	0.00	0.00	0.00	4.49
885	962	2.413453	GAGCTTCAGTTTGATCCGACAC	59.587	50.000	0.00	0.00	0.00	3.67
886	963	2.688507	GAGCTTCAGTTTGATCCGACA	58.311	47.619	0.00	0.00	0.00	4.35
888	965	1.404181	CCGAGCTTCAGTTTGATCCGA	60.404	52.381	0.00	0.00	0.00	4.55
936	1028	3.330701	AGGGGATAACACAGCTTTCAGAA	59.669	43.478	0.00	0.00	0.00	3.02
944	1036	0.107654	AGCGAAGGGGATAACACAGC	60.108	55.000	0.00	0.00	0.00	4.40
988	1080	2.792542	CGATCGCCATGCCTTTTCTTTC	60.793	50.000	0.26	0.00	0.00	2.62
989	1081	1.133025	CGATCGCCATGCCTTTTCTTT	59.867	47.619	0.26	0.00	0.00	2.52
993	1085	1.656818	CCACGATCGCCATGCCTTTT	61.657	55.000	16.60	0.00	0.00	2.27
1078	1170	2.892425	CGCAACTCTCCATCGGCC	60.892	66.667	0.00	0.00	0.00	6.13
1080	1172	2.892425	GCCGCAACTCTCCATCGG	60.892	66.667	0.00	0.00	42.68	4.18
1081	1173	3.257561	CGCCGCAACTCTCCATCG	61.258	66.667	0.00	0.00	0.00	3.84
1162	1266	1.099689	GAGCAGGAGAGAACGTAGCT	58.900	55.000	0.00	0.00	0.00	3.32
1213	1317	4.187694	CAACTCATCCTCAGCTTAGTTCC	58.812	47.826	0.00	0.00	0.00	3.62
1226	1330	0.036765	TGTACCACGCCAACTCATCC	60.037	55.000	0.00	0.00	0.00	3.51
1243	1352	1.197430	CCTCCTGGCTGTCCTTCTGT	61.197	60.000	0.00	0.00	0.00	3.41
1280	1389	0.676151	CAGCCCAGCTCCTTGAGTTC	60.676	60.000	0.00	0.00	36.40	3.01
1282	1391	2.600729	CCAGCCCAGCTCCTTGAGT	61.601	63.158	0.00	0.00	36.40	3.41
1350	1459	2.107901	AGGGCATACTAGTAGTAGCGGT	59.892	50.000	15.08	0.00	33.66	5.68
1366	1475	1.002201	CCAAATGTTTGATGCAGGGCA	59.998	47.619	7.04	0.00	40.55	5.36
1370	1479	5.049336	TGCAAATTCCAAATGTTTGATGCAG	60.049	36.000	7.04	0.00	40.55	4.41
1394	1503	3.067106	CACTATGCCACACTCGAAAACT	58.933	45.455	0.00	0.00	0.00	2.66
1403	1512	2.616960	TGATCGAACACTATGCCACAC	58.383	47.619	0.00	0.00	0.00	3.82
1405	1514	3.623060	ACATTGATCGAACACTATGCCAC	59.377	43.478	7.13	0.00	0.00	5.01
1434	1553	2.486472	AGGTTCATCAGTTGGAGCAG	57.514	50.000	0.00	0.00	33.43	4.24
1472	1593	1.056103	CAGAGACGTCTGCTCAAACG	58.944	55.000	25.58	4.16	43.89	3.60
1551	1672	0.304705	CGGCATGCCTTACATCGTTC	59.695	55.000	33.07	3.61	36.64	3.95
1570	1691	5.983475	ACACTACTACGATTCGTATAGCAC	58.017	41.667	18.46	0.00	41.53	4.40
1571	1692	5.754890	TGACACTACTACGATTCGTATAGCA	59.245	40.000	18.46	12.04	41.53	3.49
1572	1693	6.145209	TCTGACACTACTACGATTCGTATAGC	59.855	42.308	18.46	10.25	41.53	2.97
1574	1695	6.145209	GCTCTGACACTACTACGATTCGTATA	59.855	42.308	18.46	11.96	41.53	1.47
1576	1697	4.269603	GCTCTGACACTACTACGATTCGTA	59.730	45.833	17.31	17.31	41.54	3.43
1577	1698	3.063725	GCTCTGACACTACTACGATTCGT	59.936	47.826	16.86	16.86	44.35	3.85
1578	1699	3.310227	AGCTCTGACACTACTACGATTCG	59.690	47.826	4.14	4.14	0.00	3.34
1579	1700	4.886247	AGCTCTGACACTACTACGATTC	57.114	45.455	0.00	0.00	0.00	2.52
1582	1703	4.732672	TCTAGCTCTGACACTACTACGA	57.267	45.455	0.00	0.00	0.00	3.43
1583	1704	5.994887	AATCTAGCTCTGACACTACTACG	57.005	43.478	0.00	0.00	0.00	3.51
1584	1705	8.842358	AGATAATCTAGCTCTGACACTACTAC	57.158	38.462	0.00	0.00	0.00	2.73
1587	1708	6.861055	GCAAGATAATCTAGCTCTGACACTAC	59.139	42.308	0.00	0.00	0.00	2.73
1589	1710	5.362143	TGCAAGATAATCTAGCTCTGACACT	59.638	40.000	0.00	0.00	0.00	3.55
1608	1809	7.642978	GCAGAATTAGAGTATGAACAATGCAAG	59.357	37.037	0.00	0.00	0.00	4.01
1623	1824	7.701078	CAGACCAAATGAAATGCAGAATTAGAG	59.299	37.037	0.00	0.00	0.00	2.43
1625	1826	7.541162	TCAGACCAAATGAAATGCAGAATTAG	58.459	34.615	0.00	0.00	0.00	1.73
1628	1829	5.988310	TCAGACCAAATGAAATGCAGAAT	57.012	34.783	0.00	0.00	0.00	2.40
1629	1830	5.477637	TGATCAGACCAAATGAAATGCAGAA	59.522	36.000	0.00	0.00	0.00	3.02
1630	1831	5.011586	TGATCAGACCAAATGAAATGCAGA	58.988	37.500	0.00	0.00	0.00	4.26
1639	1840	3.181480	TGCATGCATGATCAGACCAAATG	60.181	43.478	30.64	0.00	0.00	2.32
1645	1846	0.311165	GCCTGCATGCATGATCAGAC	59.689	55.000	30.64	16.61	0.00	3.51
1658	1863	4.927782	ACAGAAACGCCGCCTGCA	62.928	61.111	2.36	0.00	41.33	4.41
1662	1867	2.251371	GTGAACAGAAACGCCGCC	59.749	61.111	0.00	0.00	0.00	6.13
1663	1868	2.127758	CGTGAACAGAAACGCCGC	60.128	61.111	0.00	0.00	32.40	6.53
1664	1869	2.154427	GACCGTGAACAGAAACGCCG	62.154	60.000	0.00	0.00	38.46	6.46
1665	1870	1.568025	GACCGTGAACAGAAACGCC	59.432	57.895	0.00	0.00	38.46	5.68
1775	1992	3.675467	AAGTTTTGCAAGTCACTCGAC	57.325	42.857	0.00	0.00	42.95	4.20
1777	1994	3.758300	ACAAAGTTTTGCAAGTCACTCG	58.242	40.909	0.00	2.07	41.79	4.18
1782	1999	5.005682	GGAACATGACAAAGTTTTGCAAGTC	59.994	40.000	0.00	3.20	41.79	3.01
1783	2000	4.869861	GGAACATGACAAAGTTTTGCAAGT	59.130	37.500	0.00	0.00	41.79	3.16
1784	2001	4.869297	TGGAACATGACAAAGTTTTGCAAG	59.131	37.500	0.00	4.31	41.79	4.01
1809	2031	4.943093	TGCATTGCAGTCTATTAAGCTCAA	59.057	37.500	7.38	0.00	33.32	3.02
1824	2046	3.795877	TCAGACGATCTATTGCATTGCA	58.204	40.909	7.38	7.38	36.47	4.08
1827	2049	6.108687	TGAAGTTCAGACGATCTATTGCATT	58.891	36.000	0.08	0.00	0.00	3.56
1917	2140	2.885266	TGCTTCCGATGGCTAGTACTAG	59.115	50.000	23.25	23.25	36.29	2.57
1986	2231	6.127647	TGCAACATTTGTTTTTCTCTCTGAGT	60.128	34.615	4.32	0.00	35.83	3.41
2021	2292	3.090952	TGCAACATTAGCGCTGTTTTT	57.909	38.095	22.90	5.18	34.69	1.94
2022	2293	2.791383	TGCAACATTAGCGCTGTTTT	57.209	40.000	22.90	5.13	34.69	2.43
2023	2294	2.489329	AGATGCAACATTAGCGCTGTTT	59.511	40.909	22.90	4.39	34.69	2.83
2024	2295	2.086869	AGATGCAACATTAGCGCTGTT	58.913	42.857	22.90	14.31	37.31	3.16
2025	2296	1.742761	AGATGCAACATTAGCGCTGT	58.257	45.000	22.90	7.73	33.85	4.40
2026	2297	3.495753	TGATAGATGCAACATTAGCGCTG	59.504	43.478	22.90	6.92	33.85	5.18
2027	2298	3.496130	GTGATAGATGCAACATTAGCGCT	59.504	43.478	17.26	17.26	33.85	5.92
2028	2299	3.364366	GGTGATAGATGCAACATTAGCGC	60.364	47.826	0.00	0.00	33.85	5.92
2029	2300	3.120889	CGGTGATAGATGCAACATTAGCG	60.121	47.826	0.00	0.00	33.85	4.26
2262	2602	3.573967	GCTCCTTTCCAATGTCCAAAGAA	59.426	43.478	0.00	0.00	29.96	2.52
2277	2617	3.418684	ACGAGGTTAACATGCTCCTTT	57.581	42.857	8.10	0.00	0.00	3.11
2360	2700	7.148557	GCTACTGACAGGTTTAACTCAAGAATC	60.149	40.741	7.51	0.00	0.00	2.52
2418	2758	5.475719	CATCAACTGAACCAAATGCAGAAT	58.524	37.500	0.00	0.00	33.94	2.40
2449	2789	7.009907	ACGGCGTAATTTCTGAAGTTATAAGTC	59.990	37.037	12.58	5.06	0.00	3.01
2499	2839	1.719780	GTTATACTGCAGCGCGGATAC	59.280	52.381	15.27	0.00	38.46	2.24
2500	2840	1.611977	AGTTATACTGCAGCGCGGATA	59.388	47.619	15.27	0.00	38.46	2.59
2501	2841	0.389391	AGTTATACTGCAGCGCGGAT	59.611	50.000	15.27	0.00	38.46	4.18
2502	2842	0.174845	AAGTTATACTGCAGCGCGGA	59.825	50.000	15.27	2.07	38.46	5.54
2503	2843	0.301687	CAAGTTATACTGCAGCGCGG	59.698	55.000	15.27	2.11	41.29	6.46
2504	2844	1.277326	TCAAGTTATACTGCAGCGCG	58.723	50.000	15.27	0.00	0.00	6.86
2505	2845	2.097202	CGATCAAGTTATACTGCAGCGC	60.097	50.000	15.27	0.00	0.00	5.92
2506	2846	3.372060	TCGATCAAGTTATACTGCAGCG	58.628	45.455	15.27	4.55	0.00	5.18
2528	2868	3.258872	TCTTTTAGGCGCAGGTAAGTGTA	59.741	43.478	10.83	0.00	0.00	2.90
2534	2874	2.843401	TGTTCTTTTAGGCGCAGGTA	57.157	45.000	10.83	0.00	0.00	3.08
2541	2881	4.925646	CCTTGCTTTCATGTTCTTTTAGGC	59.074	41.667	0.00	0.00	0.00	3.93
2542	2882	5.011023	ACCCTTGCTTTCATGTTCTTTTAGG	59.989	40.000	0.00	0.00	0.00	2.69
2543	2883	6.089249	ACCCTTGCTTTCATGTTCTTTTAG	57.911	37.500	0.00	0.00	0.00	1.85
2544	2884	6.478512	AACCCTTGCTTTCATGTTCTTTTA	57.521	33.333	0.00	0.00	0.00	1.52
2545	2885	5.357742	AACCCTTGCTTTCATGTTCTTTT	57.642	34.783	0.00	0.00	0.00	2.27
2546	2886	5.357742	AAACCCTTGCTTTCATGTTCTTT	57.642	34.783	0.00	0.00	0.00	2.52
2547	2887	5.357742	AAAACCCTTGCTTTCATGTTCTT	57.642	34.783	0.00	0.00	0.00	2.52
2548	2888	5.104982	TCAAAAACCCTTGCTTTCATGTTCT	60.105	36.000	0.00	0.00	0.00	3.01
2549	2889	5.115480	TCAAAAACCCTTGCTTTCATGTTC	58.885	37.500	0.00	0.00	0.00	3.18
2550	2890	5.096443	TCAAAAACCCTTGCTTTCATGTT	57.904	34.783	0.00	0.00	0.00	2.71
2551	2891	4.751767	TCAAAAACCCTTGCTTTCATGT	57.248	36.364	0.00	0.00	0.00	3.21
2552	2892	6.434018	TTTTCAAAAACCCTTGCTTTCATG	57.566	33.333	0.00	0.00	0.00	3.07
2553	2893	6.459985	GCATTTTCAAAAACCCTTGCTTTCAT	60.460	34.615	0.00	0.00	31.16	2.57
2554	2894	5.163673	GCATTTTCAAAAACCCTTGCTTTCA	60.164	36.000	0.00	0.00	31.16	2.69
2555	2895	5.066375	AGCATTTTCAAAAACCCTTGCTTTC	59.934	36.000	2.63	0.00	37.26	2.62
2556	2896	4.949238	AGCATTTTCAAAAACCCTTGCTTT	59.051	33.333	2.63	0.00	37.26	3.51
2557	2897	4.336153	CAGCATTTTCAAAAACCCTTGCTT	59.664	37.500	5.36	0.00	38.02	3.91
2558	2898	3.878699	CAGCATTTTCAAAAACCCTTGCT	59.121	39.130	2.63	2.63	39.65	3.91
2559	2899	3.876320	TCAGCATTTTCAAAAACCCTTGC	59.124	39.130	0.00	0.00	32.94	4.01
2560	2900	5.358922	TCTCAGCATTTTCAAAAACCCTTG	58.641	37.500	0.00	0.00	0.00	3.61
2561	2901	5.612725	TCTCAGCATTTTCAAAAACCCTT	57.387	34.783	0.00	0.00	0.00	3.95
2562	2902	5.305128	TCATCTCAGCATTTTCAAAAACCCT	59.695	36.000	0.00	0.00	0.00	4.34
2563	2903	5.406477	GTCATCTCAGCATTTTCAAAAACCC	59.594	40.000	0.00	0.00	0.00	4.11
2564	2904	5.117592	CGTCATCTCAGCATTTTCAAAAACC	59.882	40.000	0.00	0.00	0.00	3.27
2565	2905	5.387752	GCGTCATCTCAGCATTTTCAAAAAC	60.388	40.000	0.00	0.00	0.00	2.43
2566	2906	4.681025	GCGTCATCTCAGCATTTTCAAAAA	59.319	37.500	0.00	0.00	0.00	1.94
2567	2907	4.229096	GCGTCATCTCAGCATTTTCAAAA	58.771	39.130	0.00	0.00	0.00	2.44
2568	2908	3.366273	GGCGTCATCTCAGCATTTTCAAA	60.366	43.478	0.00	0.00	0.00	2.69
2569	2909	2.162208	GGCGTCATCTCAGCATTTTCAA	59.838	45.455	0.00	0.00	0.00	2.69
2570	2910	1.739466	GGCGTCATCTCAGCATTTTCA	59.261	47.619	0.00	0.00	0.00	2.69
2571	2911	1.739466	TGGCGTCATCTCAGCATTTTC	59.261	47.619	0.00	0.00	0.00	2.29
2572	2912	1.825090	TGGCGTCATCTCAGCATTTT	58.175	45.000	0.00	0.00	0.00	1.82
2573	2913	1.741706	CTTGGCGTCATCTCAGCATTT	59.258	47.619	0.00	0.00	0.00	2.32
2574	2914	1.065926	TCTTGGCGTCATCTCAGCATT	60.066	47.619	0.00	0.00	0.00	3.56
2575	2915	0.538584	TCTTGGCGTCATCTCAGCAT	59.461	50.000	0.00	0.00	0.00	3.79
2576	2916	0.108472	CTCTTGGCGTCATCTCAGCA	60.108	55.000	0.00	0.00	0.00	4.41
2577	2917	1.427592	GCTCTTGGCGTCATCTCAGC	61.428	60.000	0.00	0.00	0.00	4.26
2578	2918	0.809241	GGCTCTTGGCGTCATCTCAG	60.809	60.000	0.00	0.00	42.94	3.35
2579	2919	1.219124	GGCTCTTGGCGTCATCTCA	59.781	57.895	0.00	0.00	42.94	3.27
2580	2920	0.107945	AAGGCTCTTGGCGTCATCTC	60.108	55.000	0.00	0.00	44.18	2.75
2581	2921	0.392193	CAAGGCTCTTGGCGTCATCT	60.392	55.000	0.00	0.00	44.18	2.90
2582	2922	1.372087	CCAAGGCTCTTGGCGTCATC	61.372	60.000	17.56	0.00	44.18	2.92
2583	2923	1.377725	CCAAGGCTCTTGGCGTCAT	60.378	57.895	17.56	0.00	44.18	3.06
2584	2924	2.032528	CCAAGGCTCTTGGCGTCA	59.967	61.111	17.56	0.00	44.18	4.35
2585	2925	2.032681	ACCAAGGCTCTTGGCGTC	59.967	61.111	25.26	0.00	43.23	5.19
2586	2926	2.281761	CACCAAGGCTCTTGGCGT	60.282	61.111	25.26	10.95	43.23	5.68
2587	2927	0.962356	ATTCACCAAGGCTCTTGGCG	60.962	55.000	25.26	19.23	43.23	5.69
2588	2928	0.813821	GATTCACCAAGGCTCTTGGC	59.186	55.000	25.26	11.28	43.23	4.52
2589	2929	2.290514	TGAGATTCACCAAGGCTCTTGG	60.291	50.000	24.27	24.27	44.91	3.61
2590	2930	3.063510	TGAGATTCACCAAGGCTCTTG	57.936	47.619	7.69	7.69	0.00	3.02
2591	2931	4.263639	TGAATGAGATTCACCAAGGCTCTT	60.264	41.667	0.00	0.00	43.84	2.85
2592	2932	3.265221	TGAATGAGATTCACCAAGGCTCT	59.735	43.478	0.00	0.00	43.84	4.09
2593	2933	3.614092	TGAATGAGATTCACCAAGGCTC	58.386	45.455	0.00	0.00	43.84	4.70
2594	2934	3.726557	TGAATGAGATTCACCAAGGCT	57.273	42.857	0.00	0.00	43.84	4.58
2602	2942	9.511272	TCTTGAAATCTTCTTGAATGAGATTCA	57.489	29.630	0.00	0.00	46.77	2.57
2605	2945	8.407064	GCATCTTGAAATCTTCTTGAATGAGAT	58.593	33.333	0.00	0.00	0.00	2.75
2606	2946	7.610692	AGCATCTTGAAATCTTCTTGAATGAGA	59.389	33.333	0.00	0.00	0.00	3.27
2607	2947	7.763356	AGCATCTTGAAATCTTCTTGAATGAG	58.237	34.615	0.00	0.00	0.00	2.90
2608	2948	7.392393	TGAGCATCTTGAAATCTTCTTGAATGA	59.608	33.333	0.00	0.00	34.92	2.57
2609	2949	7.535997	TGAGCATCTTGAAATCTTCTTGAATG	58.464	34.615	0.00	0.00	34.92	2.67
2610	2950	7.698506	TGAGCATCTTGAAATCTTCTTGAAT	57.301	32.000	0.00	0.00	34.92	2.57
2611	2951	7.365741	GTTGAGCATCTTGAAATCTTCTTGAA	58.634	34.615	0.00	0.00	34.92	2.69
2612	2952	6.347969	CGTTGAGCATCTTGAAATCTTCTTGA	60.348	38.462	0.00	0.00	34.92	3.02
2613	2953	5.793952	CGTTGAGCATCTTGAAATCTTCTTG	59.206	40.000	0.00	0.00	34.92	3.02
2614	2954	5.702670	TCGTTGAGCATCTTGAAATCTTCTT	59.297	36.000	0.00	0.00	34.92	2.52
2615	2955	5.240891	TCGTTGAGCATCTTGAAATCTTCT	58.759	37.500	0.00	0.00	34.92	2.85
2616	2956	5.447010	CCTCGTTGAGCATCTTGAAATCTTC	60.447	44.000	0.00	0.00	34.92	2.87
2617	2957	4.394300	CCTCGTTGAGCATCTTGAAATCTT	59.606	41.667	0.00	0.00	34.92	2.40
2618	2958	3.937706	CCTCGTTGAGCATCTTGAAATCT	59.062	43.478	0.00	0.00	34.92	2.40
2619	2959	3.486542	GCCTCGTTGAGCATCTTGAAATC	60.487	47.826	0.00	0.00	34.92	2.17
2620	2960	2.421424	GCCTCGTTGAGCATCTTGAAAT	59.579	45.455	0.00	0.00	34.92	2.17
2621	2961	1.806542	GCCTCGTTGAGCATCTTGAAA	59.193	47.619	0.00	0.00	34.92	2.69
2622	2962	1.442769	GCCTCGTTGAGCATCTTGAA	58.557	50.000	0.00	0.00	34.92	2.69
2623	2963	0.391661	GGCCTCGTTGAGCATCTTGA	60.392	55.000	0.00	0.00	34.92	3.02
2624	2964	0.392193	AGGCCTCGTTGAGCATCTTG	60.392	55.000	0.00	0.00	34.92	3.02
2625	2965	0.326264	AAGGCCTCGTTGAGCATCTT	59.674	50.000	5.23	0.00	34.92	2.40
2626	2966	0.107945	GAAGGCCTCGTTGAGCATCT	60.108	55.000	5.23	0.00	34.92	2.90
2627	2967	1.092345	GGAAGGCCTCGTTGAGCATC	61.092	60.000	5.23	0.00	0.00	3.91
2628	2968	1.078143	GGAAGGCCTCGTTGAGCAT	60.078	57.895	5.23	0.00	0.00	3.79
2629	2969	2.347490	GGAAGGCCTCGTTGAGCA	59.653	61.111	5.23	0.00	0.00	4.26
2630	2970	2.815647	CGGAAGGCCTCGTTGAGC	60.816	66.667	5.23	0.00	0.00	4.26
2631	2971	1.446272	GACGGAAGGCCTCGTTGAG	60.446	63.158	19.37	5.19	39.88	3.02
2632	2972	2.654877	GACGGAAGGCCTCGTTGA	59.345	61.111	19.37	0.00	39.88	3.18
2640	2980	0.035439	TGAATGGAAGGACGGAAGGC	60.035	55.000	0.00	0.00	39.70	4.35
2641	2981	1.407437	CCTGAATGGAAGGACGGAAGG	60.407	57.143	0.00	0.00	36.91	3.46
2642	2982	1.279271	ACCTGAATGGAAGGACGGAAG	59.721	52.381	0.00	0.00	38.27	3.46
2643	2983	1.003118	CACCTGAATGGAAGGACGGAA	59.997	52.381	0.00	0.00	38.27	4.30
2644	2984	0.613260	CACCTGAATGGAAGGACGGA	59.387	55.000	0.00	0.00	38.27	4.69
2645	2985	0.392998	CCACCTGAATGGAAGGACGG	60.393	60.000	0.00	0.00	43.02	4.79
2646	2986	1.026718	GCCACCTGAATGGAAGGACG	61.027	60.000	0.00	0.00	43.02	4.79
2647	2987	0.329596	AGCCACCTGAATGGAAGGAC	59.670	55.000	0.00	0.00	43.02	3.85
2648	2988	0.329261	CAGCCACCTGAATGGAAGGA	59.671	55.000	0.00	0.00	43.02	3.36
2649	2989	0.682209	CCAGCCACCTGAATGGAAGG	60.682	60.000	0.00	0.00	43.02	3.46
2650	2990	0.682209	CCCAGCCACCTGAATGGAAG	60.682	60.000	0.00	0.00	43.02	3.46
2651	2991	1.383799	CCCAGCCACCTGAATGGAA	59.616	57.895	0.00	0.00	43.02	3.53
2652	2992	0.548926	TACCCAGCCACCTGAATGGA	60.549	55.000	0.00	0.00	43.02	3.41
2653	2993	0.107017	CTACCCAGCCACCTGAATGG	60.107	60.000	0.00	0.00	41.77	3.16
2654	2994	0.107017	CCTACCCAGCCACCTGAATG	60.107	60.000	0.00	0.00	41.77	2.67
2655	2995	0.253160	TCCTACCCAGCCACCTGAAT	60.253	55.000	0.00	0.00	41.77	2.57
2656	2996	0.474854	TTCCTACCCAGCCACCTGAA	60.475	55.000	0.00	0.00	41.77	3.02
2657	2997	1.159905	TTCCTACCCAGCCACCTGA	59.840	57.895	0.00	0.00	41.77	3.86
2658	2998	1.299976	GTTCCTACCCAGCCACCTG	59.700	63.158	0.00	0.00	38.85	4.00
2659	2999	1.151899	TGTTCCTACCCAGCCACCT	60.152	57.895	0.00	0.00	0.00	4.00
2660	3000	1.299976	CTGTTCCTACCCAGCCACC	59.700	63.158	0.00	0.00	0.00	4.61
2661	3001	1.299976	CCTGTTCCTACCCAGCCAC	59.700	63.158	0.00	0.00	0.00	5.01
2662	3002	1.923395	CCCTGTTCCTACCCAGCCA	60.923	63.158	0.00	0.00	0.00	4.75
2663	3003	1.923909	ACCCTGTTCCTACCCAGCC	60.924	63.158	0.00	0.00	0.00	4.85
2664	3004	1.299976	CACCCTGTTCCTACCCAGC	59.700	63.158	0.00	0.00	0.00	4.85
2665	3005	1.831736	CTACACCCTGTTCCTACCCAG	59.168	57.143	0.00	0.00	0.00	4.45
2666	3006	1.553884	CCTACACCCTGTTCCTACCCA	60.554	57.143	0.00	0.00	0.00	4.51
2667	3007	1.201424	CCTACACCCTGTTCCTACCC	58.799	60.000	0.00	0.00	0.00	3.69
2668	3008	2.242882	TCCTACACCCTGTTCCTACC	57.757	55.000	0.00	0.00	0.00	3.18
2669	3009	2.434702	CCATCCTACACCCTGTTCCTAC	59.565	54.545	0.00	0.00	0.00	3.18
2670	3010	2.045326	ACCATCCTACACCCTGTTCCTA	59.955	50.000	0.00	0.00	0.00	2.94
2671	3011	1.203440	ACCATCCTACACCCTGTTCCT	60.203	52.381	0.00	0.00	0.00	3.36
2672	3012	1.065418	CACCATCCTACACCCTGTTCC	60.065	57.143	0.00	0.00	0.00	3.62
2673	3013	1.628846	ACACCATCCTACACCCTGTTC	59.371	52.381	0.00	0.00	0.00	3.18
2674	3014	1.628846	GACACCATCCTACACCCTGTT	59.371	52.381	0.00	0.00	0.00	3.16
2675	3015	1.203313	AGACACCATCCTACACCCTGT	60.203	52.381	0.00	0.00	0.00	4.00
2676	3016	1.573108	AGACACCATCCTACACCCTG	58.427	55.000	0.00	0.00	0.00	4.45
2677	3017	2.188817	GAAGACACCATCCTACACCCT	58.811	52.381	0.00	0.00	0.00	4.34
2678	3018	2.188817	AGAAGACACCATCCTACACCC	58.811	52.381	0.00	0.00	0.00	4.61
2679	3019	3.983044	AAGAAGACACCATCCTACACC	57.017	47.619	0.00	0.00	0.00	4.16
2700	3040	8.367911	TGAAACAGAGAGCTACAGAGATAAAAA	58.632	33.333	0.00	0.00	0.00	1.94
2701	3041	7.896811	TGAAACAGAGAGCTACAGAGATAAAA	58.103	34.615	0.00	0.00	0.00	1.52
2702	3042	7.468141	TGAAACAGAGAGCTACAGAGATAAA	57.532	36.000	0.00	0.00	0.00	1.40
2703	3043	7.394641	TCTTGAAACAGAGAGCTACAGAGATAA	59.605	37.037	0.00	0.00	0.00	1.75
2704	3044	6.887002	TCTTGAAACAGAGAGCTACAGAGATA	59.113	38.462	0.00	0.00	0.00	1.98
2705	3045	5.714333	TCTTGAAACAGAGAGCTACAGAGAT	59.286	40.000	0.00	0.00	0.00	2.75
2706	3046	5.073428	TCTTGAAACAGAGAGCTACAGAGA	58.927	41.667	0.00	0.00	0.00	3.10
2707	3047	5.384063	TCTTGAAACAGAGAGCTACAGAG	57.616	43.478	0.00	0.00	0.00	3.35
2708	3048	5.384063	CTCTTGAAACAGAGAGCTACAGA	57.616	43.478	0.00	0.00	42.81	3.41
2715	3055	6.481644	ACAAAACTAGCTCTTGAAACAGAGAG	59.518	38.462	1.77	0.00	42.81	3.20
2716	3056	6.349300	ACAAAACTAGCTCTTGAAACAGAGA	58.651	36.000	1.77	0.00	42.81	3.10
2717	3057	6.481644	AGACAAAACTAGCTCTTGAAACAGAG	59.518	38.462	0.00	0.00	43.02	3.35
2718	3058	6.349300	AGACAAAACTAGCTCTTGAAACAGA	58.651	36.000	0.00	0.00	0.00	3.41
2719	3059	6.610741	AGACAAAACTAGCTCTTGAAACAG	57.389	37.500	0.00	0.00	0.00	3.16
2720	3060	6.238103	CGAAGACAAAACTAGCTCTTGAAACA	60.238	38.462	0.00	0.00	0.00	2.83
2721	3061	6.130058	CGAAGACAAAACTAGCTCTTGAAAC	58.870	40.000	0.00	0.00	0.00	2.78
2722	3062	5.236478	CCGAAGACAAAACTAGCTCTTGAAA	59.764	40.000	0.00	0.00	0.00	2.69
2723	3063	4.750098	CCGAAGACAAAACTAGCTCTTGAA	59.250	41.667	0.00	0.00	0.00	2.69
2724	3064	4.202223	ACCGAAGACAAAACTAGCTCTTGA	60.202	41.667	0.00	0.00	0.00	3.02
2725	3065	4.058817	ACCGAAGACAAAACTAGCTCTTG	58.941	43.478	0.00	0.00	0.00	3.02
2726	3066	4.338379	ACCGAAGACAAAACTAGCTCTT	57.662	40.909	0.00	0.00	0.00	2.85
2727	3067	4.308265	GAACCGAAGACAAAACTAGCTCT	58.692	43.478	0.00	0.00	0.00	4.09
2728	3068	3.121445	CGAACCGAAGACAAAACTAGCTC	59.879	47.826	0.00	0.00	0.00	4.09
2729	3069	3.057734	CGAACCGAAGACAAAACTAGCT	58.942	45.455	0.00	0.00	0.00	3.32
2730	3070	2.798847	ACGAACCGAAGACAAAACTAGC	59.201	45.455	0.00	0.00	0.00	3.42
2731	3071	3.183775	CCACGAACCGAAGACAAAACTAG	59.816	47.826	0.00	0.00	0.00	2.57
2732	3072	3.125316	CCACGAACCGAAGACAAAACTA	58.875	45.455	0.00	0.00	0.00	2.24
2733	3073	1.937899	CCACGAACCGAAGACAAAACT	59.062	47.619	0.00	0.00	0.00	2.66
2734	3074	1.003223	CCCACGAACCGAAGACAAAAC	60.003	52.381	0.00	0.00	0.00	2.43
2735	3075	1.301423	CCCACGAACCGAAGACAAAA	58.699	50.000	0.00	0.00	0.00	2.44
2736	3076	0.533308	CCCCACGAACCGAAGACAAA	60.533	55.000	0.00	0.00	0.00	2.83
2737	3077	1.070105	CCCCACGAACCGAAGACAA	59.930	57.895	0.00	0.00	0.00	3.18
2738	3078	2.738480	CCCCACGAACCGAAGACA	59.262	61.111	0.00	0.00	0.00	3.41
2739	3079	2.741211	GCCCCACGAACCGAAGAC	60.741	66.667	0.00	0.00	0.00	3.01
2740	3080	3.235481	TGCCCCACGAACCGAAGA	61.235	61.111	0.00	0.00	0.00	2.87
2741	3081	3.047877	GTGCCCCACGAACCGAAG	61.048	66.667	0.00	0.00	0.00	3.79
2742	3082	2.612095	AAAGTGCCCCACGAACCGAA	62.612	55.000	0.00	0.00	39.64	4.30
2743	3083	2.612095	AAAAGTGCCCCACGAACCGA	62.612	55.000	0.00	0.00	39.64	4.69
2744	3084	2.190841	AAAAGTGCCCCACGAACCG	61.191	57.895	0.00	0.00	39.64	4.44
2745	3085	1.362355	CAAAAGTGCCCCACGAACC	59.638	57.895	0.00	0.00	39.64	3.62
2746	3086	1.299850	GCAAAAGTGCCCCACGAAC	60.300	57.895	0.00	0.00	45.68	3.95
2747	3087	3.124686	GCAAAAGTGCCCCACGAA	58.875	55.556	0.00	0.00	45.68	3.85
2756	3096	0.605319	TGGTAGAGGCGGCAAAAGTG	60.605	55.000	13.08	0.00	0.00	3.16
2757	3097	0.321653	CTGGTAGAGGCGGCAAAAGT	60.322	55.000	13.08	0.00	0.00	2.66
2758	3098	0.321653	ACTGGTAGAGGCGGCAAAAG	60.322	55.000	13.08	2.15	0.00	2.27
2759	3099	0.978151	TACTGGTAGAGGCGGCAAAA	59.022	50.000	13.08	0.00	0.00	2.44
2760	3100	0.248289	GTACTGGTAGAGGCGGCAAA	59.752	55.000	13.08	0.00	0.00	3.68
2761	3101	1.610554	GGTACTGGTAGAGGCGGCAA	61.611	60.000	13.08	0.00	0.00	4.52
2762	3102	2.056223	GGTACTGGTAGAGGCGGCA	61.056	63.158	13.08	0.00	0.00	5.69
2763	3103	1.400530	ATGGTACTGGTAGAGGCGGC	61.401	60.000	0.00	0.00	0.00	6.53
2764	3104	0.389391	CATGGTACTGGTAGAGGCGG	59.611	60.000	0.00	0.00	0.00	6.13
2765	3105	1.112113	ACATGGTACTGGTAGAGGCG	58.888	55.000	0.00	0.00	0.00	5.52
2766	3106	3.705072	AGTTACATGGTACTGGTAGAGGC	59.295	47.826	0.00	0.00	0.00	4.70
2767	3107	5.934402	AAGTTACATGGTACTGGTAGAGG	57.066	43.478	0.00	0.00	0.00	3.69
2772	3112	8.648693	GGAGATATAAAGTTACATGGTACTGGT	58.351	37.037	0.00	0.00	0.00	4.00
2773	3113	8.871125	AGGAGATATAAAGTTACATGGTACTGG	58.129	37.037	0.00	0.00	0.00	4.00
2777	3117	9.886337	TGGTAGGAGATATAAAGTTACATGGTA	57.114	33.333	0.00	0.00	0.00	3.25
2778	3118	8.792830	TGGTAGGAGATATAAAGTTACATGGT	57.207	34.615	0.00	0.00	0.00	3.55
2779	3119	9.877178	GATGGTAGGAGATATAAAGTTACATGG	57.123	37.037	0.00	0.00	0.00	3.66
2792	3132	8.762645	CCTTTGCATTATAGATGGTAGGAGATA	58.237	37.037	0.00	0.00	0.00	1.98
2793	3133	7.628234	CCTTTGCATTATAGATGGTAGGAGAT	58.372	38.462	0.00	0.00	0.00	2.75
2794	3134	6.520742	GCCTTTGCATTATAGATGGTAGGAGA	60.521	42.308	0.00	0.00	37.47	3.71
2795	3135	5.645497	GCCTTTGCATTATAGATGGTAGGAG	59.355	44.000	0.00	0.00	37.47	3.69
2796	3136	5.073008	TGCCTTTGCATTATAGATGGTAGGA	59.927	40.000	0.00	0.00	44.23	2.94
2797	3137	5.316167	TGCCTTTGCATTATAGATGGTAGG	58.684	41.667	0.00	0.00	44.23	3.18
2812	3152	3.588336	CAGGAGCTCTGCCTTTGC	58.412	61.111	14.64	0.00	36.60	3.68
2823	3163	0.319900	TTGACGAGAACAGCAGGAGC	60.320	55.000	0.00	0.00	42.56	4.70
2824	3164	2.154854	TTTGACGAGAACAGCAGGAG	57.845	50.000	0.00	0.00	0.00	3.69
2825	3165	2.613026	TTTTGACGAGAACAGCAGGA	57.387	45.000	0.00	0.00	0.00	3.86
2848	3188	9.017509	TCTGATCATAGCTTTCATGTTCTTTTT	57.982	29.630	0.00	0.00	0.00	1.94
2858	3198	8.654094	TCCTCATATTTCTGATCATAGCTTTCA	58.346	33.333	0.00	0.00	0.00	2.69
2893	3233	9.187996	TGGTGACACATTACATATTTCATTCAT	57.812	29.630	8.08	0.00	33.40	2.57
2897	3237	7.118723	ACCTGGTGACACATTACATATTTCAT	58.881	34.615	8.08	0.00	35.60	2.57
2898	3238	6.480763	ACCTGGTGACACATTACATATTTCA	58.519	36.000	8.08	0.00	35.60	2.69
2899	3239	7.250569	CAACCTGGTGACACATTACATATTTC	58.749	38.462	8.08	0.00	35.60	2.17
3034	3378	2.054232	ATGCTGATGCTGAAAGGAGG	57.946	50.000	0.00	0.00	38.10	4.30
3042	3389	1.816835	ACAGTGGAAATGCTGATGCTG	59.183	47.619	0.00	0.00	33.50	4.41
3046	3393	5.279156	GGAAAAGAACAGTGGAAATGCTGAT	60.279	40.000	0.00	0.00	33.50	2.90
3065	3412	6.264292	TGAAATTTTCAGGAGACATCGGAAAA	59.736	34.615	7.74	0.00	40.53	2.29
3066	3413	5.767665	TGAAATTTTCAGGAGACATCGGAAA	59.232	36.000	7.74	0.00	34.08	3.13
3067	3414	5.181245	GTGAAATTTTCAGGAGACATCGGAA	59.819	40.000	12.02	0.00	41.01	4.30
3068	3415	4.695455	GTGAAATTTTCAGGAGACATCGGA	59.305	41.667	12.02	0.00	41.01	4.55
3069	3416	4.142600	GGTGAAATTTTCAGGAGACATCGG	60.143	45.833	12.02	0.00	41.01	4.18
3070	3417	4.697352	AGGTGAAATTTTCAGGAGACATCG	59.303	41.667	12.02	0.00	41.01	3.84
3231	3599	4.068599	GGTTTTCTCTTCTGCTGCTACTT	58.931	43.478	0.00	0.00	0.00	2.24
3233	3601	3.434984	CAGGTTTTCTCTTCTGCTGCTAC	59.565	47.826	0.00	0.00	0.00	3.58
3234	3602	3.071602	ACAGGTTTTCTCTTCTGCTGCTA	59.928	43.478	0.00	0.00	0.00	3.49
3266	3634	0.677731	TGCATCAGCCCAACACTAGC	60.678	55.000	0.00	0.00	41.13	3.42
3268	3636	1.533625	GTTGCATCAGCCCAACACTA	58.466	50.000	0.00	0.00	40.66	2.74
3307	3691	1.676635	GCTGCAATCAGGACCTGCA	60.677	57.895	17.33	11.14	43.54	4.41
3314	3698	1.712977	GAAGCGAGGCTGCAATCAGG	61.713	60.000	0.50	0.00	39.62	3.86
3323	3707	0.681733	TGTTCTTCAGAAGCGAGGCT	59.318	50.000	5.15	0.00	42.56	4.58
3356	3740	4.408821	GCGGACACCAGGGCATCA	62.409	66.667	0.00	0.00	0.00	3.07
3445	3836	5.818678	ACCATGTTAGGACACTCAAGTTA	57.181	39.130	0.00	0.00	38.91	2.24
3449	3840	4.346709	TCTCAACCATGTTAGGACACTCAA	59.653	41.667	0.00	0.00	38.91	3.02
3452	3843	5.395768	GCTATCTCAACCATGTTAGGACACT	60.396	44.000	0.00	0.00	38.91	3.55
3456	3847	8.901472	ATATAGCTATCTCAACCATGTTAGGA	57.099	34.615	10.16	0.00	0.00	2.94
3500	3899	5.109903	CCGTTCCTTTCAGTAATACTCCTG	58.890	45.833	0.00	0.00	0.00	3.86
3502	3901	4.868734	CACCGTTCCTTTCAGTAATACTCC	59.131	45.833	0.00	0.00	0.00	3.85
3504	3903	5.479124	ACACCGTTCCTTTCAGTAATACT	57.521	39.130	0.00	0.00	0.00	2.12
3505	3904	5.930569	AGAACACCGTTCCTTTCAGTAATAC	59.069	40.000	3.31	0.00	0.00	1.89
3535	3934	0.732571	GCACCGAGACAGAGAGAGAG	59.267	60.000	0.00	0.00	0.00	3.20
3536	3935	0.678366	GGCACCGAGACAGAGAGAGA	60.678	60.000	0.00	0.00	0.00	3.10
3537	3936	0.962855	TGGCACCGAGACAGAGAGAG	60.963	60.000	0.00	0.00	0.00	3.20
3539	3938	0.318441	TTTGGCACCGAGACAGAGAG	59.682	55.000	0.00	0.00	35.94	3.20
3540	3939	0.033504	GTTTGGCACCGAGACAGAGA	59.966	55.000	0.00	0.00	35.94	3.10
3541	3940	0.034059	AGTTTGGCACCGAGACAGAG	59.966	55.000	0.00	0.00	35.94	3.35
3542	3941	1.334160	TAGTTTGGCACCGAGACAGA	58.666	50.000	0.00	0.00	35.94	3.41
3544	3943	2.037902	TGAATAGTTTGGCACCGAGACA	59.962	45.455	0.00	0.00	0.00	3.41
3545	3944	2.695359	TGAATAGTTTGGCACCGAGAC	58.305	47.619	0.00	0.00	0.00	3.36
3546	3945	3.055458	TGATGAATAGTTTGGCACCGAGA	60.055	43.478	0.00	0.00	0.00	4.04
3547	3946	3.063997	GTGATGAATAGTTTGGCACCGAG	59.936	47.826	0.00	0.00	0.00	4.63
3550	3960	5.186198	ACTAGTGATGAATAGTTTGGCACC	58.814	41.667	0.00	0.00	0.00	5.01
3564	3974	2.002586	CGCCTCAACCAACTAGTGATG	58.997	52.381	0.00	0.00	0.00	3.07
3566	3976	1.000506	GACGCCTCAACCAACTAGTGA	59.999	52.381	0.00	0.00	0.00	3.41
3569	3979	0.391263	GGGACGCCTCAACCAACTAG	60.391	60.000	0.00	0.00	0.00	2.57
3576	3986	2.126031	GTCGAGGGACGCCTCAAC	60.126	66.667	9.41	0.00	42.26	3.18
3577	3987	2.599281	TGTCGAGGGACGCCTCAA	60.599	61.111	9.41	0.00	46.49	3.02
3636	4050	6.040278	TGCATTTGGTTGTTGTCTTTCAGATA	59.960	34.615	0.00	0.00	0.00	1.98
3670	4099	0.321653	ATTGTGCCCTCGACTTCCAC	60.322	55.000	0.00	0.00	0.00	4.02
3679	4112	0.169009	GCAGACGAAATTGTGCCCTC	59.831	55.000	0.00	0.00	0.00	4.30
3681	4114	0.387239	GTGCAGACGAAATTGTGCCC	60.387	55.000	0.00	0.00	34.91	5.36
3696	4129	1.228094	TGAATGTTGCGAGGGTGCA	60.228	52.632	0.00	0.00	44.61	4.57
3697	4130	1.237285	ACTGAATGTTGCGAGGGTGC	61.237	55.000	0.00	0.00	0.00	5.01
3698	4131	1.238439	AACTGAATGTTGCGAGGGTG	58.762	50.000	0.00	0.00	37.52	4.61
3699	4132	2.038557	AGTAACTGAATGTTGCGAGGGT	59.961	45.455	0.00	0.00	44.30	4.34
3700	4133	2.699954	AGTAACTGAATGTTGCGAGGG	58.300	47.619	0.00	0.00	44.30	4.30
3701	4134	4.749245	AAAGTAACTGAATGTTGCGAGG	57.251	40.909	0.00	0.00	44.30	4.63
3702	4135	5.049405	AGGAAAAGTAACTGAATGTTGCGAG	60.049	40.000	0.00	0.00	44.30	5.03
3703	4136	4.819630	AGGAAAAGTAACTGAATGTTGCGA	59.180	37.500	0.00	0.00	44.30	5.10
3705	4138	7.041372	TGTCTAGGAAAAGTAACTGAATGTTGC	60.041	37.037	0.00	0.00	40.79	4.17
3706	4139	8.283291	GTGTCTAGGAAAAGTAACTGAATGTTG	58.717	37.037	0.00	0.00	39.55	3.33
3707	4140	7.990886	TGTGTCTAGGAAAAGTAACTGAATGTT	59.009	33.333	0.00	0.00	42.31	2.71
3708	4141	7.506114	TGTGTCTAGGAAAAGTAACTGAATGT	58.494	34.615	0.00	0.00	0.00	2.71
3709	4142	7.872993	TCTGTGTCTAGGAAAAGTAACTGAATG	59.127	37.037	0.00	0.00	0.00	2.67
3711	4144	7.356089	TCTGTGTCTAGGAAAAGTAACTGAA	57.644	36.000	0.00	0.00	0.00	3.02
3713	4146	6.091441	GCATCTGTGTCTAGGAAAAGTAACTG	59.909	42.308	0.00	0.00	0.00	3.16
3714	4147	6.014156	AGCATCTGTGTCTAGGAAAAGTAACT	60.014	38.462	0.00	0.00	0.00	2.24
3715	4148	6.091441	CAGCATCTGTGTCTAGGAAAAGTAAC	59.909	42.308	0.00	0.00	0.00	2.50
3716	4149	6.166279	CAGCATCTGTGTCTAGGAAAAGTAA	58.834	40.000	0.00	0.00	0.00	2.24
3721	4190	2.302733	TGCAGCATCTGTGTCTAGGAAA	59.697	45.455	0.00	0.00	33.43	3.13
3729	4198	2.034687	GGGGTGCAGCATCTGTGT	59.965	61.111	19.06	0.00	33.43	3.72
3753	4222	2.605338	GCAGCAGCATCTGTTTTTCGAA	60.605	45.455	0.00	0.00	41.58	3.71
3758	4227	0.038526	GCAGCAGCAGCATCTGTTTT	60.039	50.000	4.63	0.00	45.49	2.43
3759	4228	0.894184	AGCAGCAGCAGCATCTGTTT	60.894	50.000	12.92	2.87	45.49	2.83
3760	4229	1.303398	AGCAGCAGCAGCATCTGTT	60.303	52.632	12.92	6.62	45.49	3.16
3761	4230	1.745864	GAGCAGCAGCAGCATCTGT	60.746	57.895	12.92	0.00	45.49	3.41
3762	4231	1.305930	TTGAGCAGCAGCAGCATCTG	61.306	55.000	12.92	8.99	45.49	2.90
3764	4233	0.456221	ATTTGAGCAGCAGCAGCATC	59.544	50.000	12.92	7.33	45.49	3.91
3766	4235	1.536940	TTATTTGAGCAGCAGCAGCA	58.463	45.000	12.92	0.00	45.49	4.41
3767	4236	2.642139	TTTATTTGAGCAGCAGCAGC	57.358	45.000	3.17	0.46	45.49	5.25
3768	4237	4.561606	GTCATTTTATTTGAGCAGCAGCAG	59.438	41.667	3.17	0.00	45.49	4.24
3775	4253	8.305317	TGTCATCATTGTCATTTTATTTGAGCA	58.695	29.630	0.00	0.00	0.00	4.26
3794	4286	9.573133	CTAGTATTATTATGCGATGTGTCATCA	57.427	33.333	9.81	0.00	0.00	3.07
3939	4486	7.544804	TGTAATCTGCATAGTATGATGGAGT	57.455	36.000	14.52	9.28	43.62	3.85
3995	4544	3.578716	TCTGTTCATCCGGAGTCTCTTTT	59.421	43.478	11.34	0.00	0.00	2.27
4094	4650	8.723942	ACTAATACTAGAGCATTTCCAAGTTG	57.276	34.615	0.00	0.00	0.00	3.16
4143	4932	0.935898	GCTACTAGACGCAGACGCTA	59.064	55.000	0.00	0.00	45.53	4.26
4183	4972	0.670546	GCAGATGCACCACGTACACT	60.671	55.000	0.00	0.00	41.59	3.55
4212	5001	2.667199	TCCGACGACGTCTGAGCA	60.667	61.111	24.36	1.02	37.88	4.26
4213	5002	2.202324	GTCCGACGACGTCTGAGC	60.202	66.667	24.36	14.09	37.88	4.26

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.