Multiple sequence alignment - TraesCS2A01G523400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G523400 chr2A 100.000 5060 0 0 1 5060 745023120 745028179 0.000000e+00 9345.0
1 TraesCS2A01G523400 chr2B 93.847 3234 113 24 1901 5060 748972194 748975415 0.000000e+00 4791.0
2 TraesCS2A01G523400 chr2B 84.268 731 40 26 758 1420 748971432 748972155 1.190000e-180 643.0
3 TraesCS2A01G523400 chr2B 82.135 459 65 8 3344 3800 564975693 564976136 1.330000e-100 377.0
4 TraesCS2A01G523400 chr2B 100.000 32 0 0 730 761 748971386 748971417 5.470000e-05 60.2
5 TraesCS2A01G523400 chr2D 95.344 1976 64 7 3111 5060 613434462 613436435 0.000000e+00 3114.0
6 TraesCS2A01G523400 chr2D 85.620 1057 80 24 1738 2732 613433024 613434070 0.000000e+00 1044.0
7 TraesCS2A01G523400 chr2D 88.115 732 38 19 824 1508 613431951 613432680 0.000000e+00 824.0
8 TraesCS2A01G523400 chr2D 84.713 157 9 5 1 145 613431376 613431529 5.280000e-30 143.0
9 TraesCS2A01G523400 chr2D 97.222 36 0 1 727 761 613431798 613431833 5.470000e-05 60.2
10 TraesCS2A01G523400 chr6D 88.514 740 53 8 2183 2890 75851424 75852163 0.000000e+00 867.0
11 TraesCS2A01G523400 chr6D 88.243 740 55 12 2183 2890 313699972 313699233 0.000000e+00 856.0
12 TraesCS2A01G523400 chr6D 88.108 740 55 9 2183 2890 118382550 118381812 0.000000e+00 848.0
13 TraesCS2A01G523400 chr6D 87.989 741 56 9 2183 2890 408615629 408614889 0.000000e+00 845.0
14 TraesCS2A01G523400 chr6D 87.162 444 50 4 4341 4780 337685042 337684602 9.780000e-137 497.0
15 TraesCS2A01G523400 chr6D 84.656 189 15 6 4171 4345 337746036 337745848 5.210000e-40 176.0
16 TraesCS2A01G523400 chr3D 88.378 740 54 8 2183 2890 219539455 219540194 0.000000e+00 861.0
17 TraesCS2A01G523400 chr3D 85.632 522 44 13 4171 4674 342127030 342126522 2.090000e-143 520.0
18 TraesCS2A01G523400 chr3D 92.405 79 5 1 4703 4780 342126523 342126445 1.490000e-20 111.0
19 TraesCS2A01G523400 chr1D 87.924 737 57 3 2186 2890 187586812 187586076 0.000000e+00 839.0
20 TraesCS2A01G523400 chr4D 87.995 733 57 6 2183 2884 229796291 229795559 0.000000e+00 837.0
21 TraesCS2A01G523400 chr1B 87.703 740 59 8 2183 2890 27121474 27122213 0.000000e+00 833.0
22 TraesCS2A01G523400 chr1B 82.705 451 64 5 3351 3800 137430001 137430438 6.140000e-104 388.0
23 TraesCS2A01G523400 chr6B 87.620 727 59 6 2184 2879 354648241 354648967 0.000000e+00 815.0
24 TraesCS2A01G523400 chr6B 85.042 361 52 2 3344 3704 250783291 250782933 2.880000e-97 366.0
25 TraesCS2A01G523400 chrUn 86.721 738 65 9 2186 2890 22029683 22028946 0.000000e+00 789.0
26 TraesCS2A01G523400 chr6A 85.965 627 67 11 4171 4779 204935614 204934991 0.000000e+00 651.0
27 TraesCS2A01G523400 chr6A 85.000 440 44 5 3945 4364 301800407 301799970 1.300000e-115 427.0
28 TraesCS2A01G523400 chr6A 80.078 512 69 17 3391 3890 301800897 301800407 2.900000e-92 350.0
29 TraesCS2A01G523400 chr3B 85.828 628 66 12 4172 4780 314207217 314207840 0.000000e+00 645.0
30 TraesCS2A01G523400 chr5D 85.310 565 54 9 4182 4733 520995442 520994894 1.590000e-154 556.0
31 TraesCS2A01G523400 chr5A 81.701 541 80 8 3352 3890 32988296 32988819 2.800000e-117 433.0
32 TraesCS2A01G523400 chr4A 80.705 539 83 15 3344 3876 377615119 377614596 2.840000e-107 399.0
33 TraesCS2A01G523400 chr4A 90.378 291 28 0 4488 4778 377614529 377614239 2.860000e-102 383.0
34 TraesCS2A01G523400 chr7A 80.443 542 85 15 3341 3876 133418692 133419218 1.320000e-105 394.0
35 TraesCS2A01G523400 chr7A 89.003 291 32 0 4488 4778 133419285 133419575 1.340000e-95 361.0
36 TraesCS2A01G523400 chr1A 82.096 458 67 6 3344 3800 335108155 335108598 1.330000e-100 377.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G523400 chr2A 745023120 745028179 5059 False 9345.00 9345 100.0000 1 5060 1 chr2A.!!$F1 5059
1 TraesCS2A01G523400 chr2B 748971386 748975415 4029 False 1831.40 4791 92.7050 730 5060 3 chr2B.!!$F2 4330
2 TraesCS2A01G523400 chr2D 613431376 613436435 5059 False 1037.04 3114 90.2028 1 5060 5 chr2D.!!$F1 5059
3 TraesCS2A01G523400 chr6D 75851424 75852163 739 False 867.00 867 88.5140 2183 2890 1 chr6D.!!$F1 707
4 TraesCS2A01G523400 chr6D 313699233 313699972 739 True 856.00 856 88.2430 2183 2890 1 chr6D.!!$R2 707
5 TraesCS2A01G523400 chr6D 118381812 118382550 738 True 848.00 848 88.1080 2183 2890 1 chr6D.!!$R1 707
6 TraesCS2A01G523400 chr6D 408614889 408615629 740 True 845.00 845 87.9890 2183 2890 1 chr6D.!!$R5 707
7 TraesCS2A01G523400 chr3D 219539455 219540194 739 False 861.00 861 88.3780 2183 2890 1 chr3D.!!$F1 707
8 TraesCS2A01G523400 chr3D 342126445 342127030 585 True 315.50 520 89.0185 4171 4780 2 chr3D.!!$R1 609
9 TraesCS2A01G523400 chr1D 187586076 187586812 736 True 839.00 839 87.9240 2186 2890 1 chr1D.!!$R1 704
10 TraesCS2A01G523400 chr4D 229795559 229796291 732 True 837.00 837 87.9950 2183 2884 1 chr4D.!!$R1 701
11 TraesCS2A01G523400 chr1B 27121474 27122213 739 False 833.00 833 87.7030 2183 2890 1 chr1B.!!$F1 707
12 TraesCS2A01G523400 chr6B 354648241 354648967 726 False 815.00 815 87.6200 2184 2879 1 chr6B.!!$F1 695
13 TraesCS2A01G523400 chrUn 22028946 22029683 737 True 789.00 789 86.7210 2186 2890 1 chrUn.!!$R1 704
14 TraesCS2A01G523400 chr6A 204934991 204935614 623 True 651.00 651 85.9650 4171 4779 1 chr6A.!!$R1 608
15 TraesCS2A01G523400 chr6A 301799970 301800897 927 True 388.50 427 82.5390 3391 4364 2 chr6A.!!$R2 973
16 TraesCS2A01G523400 chr3B 314207217 314207840 623 False 645.00 645 85.8280 4172 4780 1 chr3B.!!$F1 608
17 TraesCS2A01G523400 chr5D 520994894 520995442 548 True 556.00 556 85.3100 4182 4733 1 chr5D.!!$R1 551
18 TraesCS2A01G523400 chr5A 32988296 32988819 523 False 433.00 433 81.7010 3352 3890 1 chr5A.!!$F1 538
19 TraesCS2A01G523400 chr4A 377614239 377615119 880 True 391.00 399 85.5415 3344 4778 2 chr4A.!!$R1 1434
20 TraesCS2A01G523400 chr7A 133418692 133419575 883 False 377.50 394 84.7230 3341 4778 2 chr7A.!!$F1 1437

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
255 288 0.030908 CTATCGGTCGAGAAGTGGCC 59.969 60.000 0.00 0.00 0.0 5.36 F
1228 1354 0.034059 CTGGTCGTGCTCCTTCTGTT 59.966 55.000 0.00 0.00 0.0 3.16 F
1705 1859 0.036010 CATATGCACCCCTCCGATCC 60.036 60.000 0.00 0.00 0.0 3.36 F
2181 2578 0.107643 TGTTCCGCATCAGTCACCAA 59.892 50.000 0.00 0.00 0.0 3.67 F
2952 3430 1.079681 TGTTGGCATACCGTCGGTC 60.080 57.895 22.74 7.07 39.7 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2162 2559 0.107643 TTGGTGACTGATGCGGAACA 59.892 50.000 0.00 0.00 0.00 3.18 R
2893 3369 0.320771 CTGTGAAGGGAGAACACCGG 60.321 60.000 0.00 0.00 34.18 5.28 R
3434 3922 1.412074 AGGGCATCCAATGGAACATCC 60.412 52.381 5.89 6.16 38.43 3.51 R
3800 4310 2.774439 AAACTGAACGCGAGCAAAAT 57.226 40.000 15.93 0.00 0.00 1.82 R
4726 5278 1.673665 CCAGAGTCCCAACAGCAGC 60.674 63.158 0.00 0.00 0.00 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 79 1.277273 GCCCTACTCAACTAACCCGTT 59.723 52.381 0.00 0.00 0.00 4.44
72 81 3.808265 GCCCTACTCAACTAACCCGTTTT 60.808 47.826 0.00 0.00 0.00 2.43
75 87 2.486918 ACTCAACTAACCCGTTTTCCG 58.513 47.619 0.00 0.00 0.00 4.30
131 143 4.324991 AAACGCCCTCCCCGTGTC 62.325 66.667 0.00 0.00 39.13 3.67
188 221 2.237143 TGACCTCGGCAGATCATTTTCT 59.763 45.455 0.00 0.00 0.00 2.52
191 224 2.223433 CCTCGGCAGATCATTTTCTTGC 60.223 50.000 0.00 0.00 0.00 4.01
192 225 1.398041 TCGGCAGATCATTTTCTTGCG 59.602 47.619 0.00 0.00 0.00 4.85
193 226 1.398041 CGGCAGATCATTTTCTTGCGA 59.602 47.619 0.00 0.00 0.00 5.10
194 227 2.538333 CGGCAGATCATTTTCTTGCGAG 60.538 50.000 0.00 0.00 0.00 5.03
195 228 2.679837 GGCAGATCATTTTCTTGCGAGA 59.320 45.455 0.00 0.00 0.00 4.04
196 229 3.127548 GGCAGATCATTTTCTTGCGAGAA 59.872 43.478 12.62 12.62 40.07 2.87
205 238 4.474226 TTTCTTGCGAGAAAGAAAGAGC 57.526 40.909 22.78 0.00 46.26 4.09
206 239 2.061773 TCTTGCGAGAAAGAAAGAGCG 58.938 47.619 0.00 0.00 31.11 5.03
207 240 0.512952 TTGCGAGAAAGAAAGAGCGC 59.487 50.000 0.00 0.00 44.15 5.92
208 241 1.291877 TGCGAGAAAGAAAGAGCGCC 61.292 55.000 2.29 0.00 43.35 6.53
209 242 1.016653 GCGAGAAAGAAAGAGCGCCT 61.017 55.000 2.29 0.00 38.67 5.52
210 243 1.433534 CGAGAAAGAAAGAGCGCCTT 58.566 50.000 2.29 4.27 36.47 4.35
216 249 3.550656 AAAGAGCGCCTTTCGACG 58.449 55.556 15.38 0.00 40.97 5.12
223 256 4.007940 GCCTTTCGACGCAACGCA 62.008 61.111 0.00 0.00 0.00 5.24
224 257 2.629210 CCTTTCGACGCAACGCAA 59.371 55.556 0.00 0.00 0.00 4.85
241 274 4.428922 CGCAAGTTTCACTCATCTATCG 57.571 45.455 0.00 0.00 0.00 2.92
242 275 3.243877 CGCAAGTTTCACTCATCTATCGG 59.756 47.826 0.00 0.00 0.00 4.18
243 276 4.184629 GCAAGTTTCACTCATCTATCGGT 58.815 43.478 0.00 0.00 0.00 4.69
244 277 4.268884 GCAAGTTTCACTCATCTATCGGTC 59.731 45.833 0.00 0.00 0.00 4.79
245 278 4.294416 AGTTTCACTCATCTATCGGTCG 57.706 45.455 0.00 0.00 0.00 4.79
246 279 3.945921 AGTTTCACTCATCTATCGGTCGA 59.054 43.478 0.00 0.00 0.00 4.20
247 280 4.035792 AGTTTCACTCATCTATCGGTCGAG 59.964 45.833 0.00 0.00 0.00 4.04
248 281 3.470645 TCACTCATCTATCGGTCGAGA 57.529 47.619 0.00 0.00 0.00 4.04
249 282 3.805207 TCACTCATCTATCGGTCGAGAA 58.195 45.455 0.00 0.00 0.00 2.87
250 283 3.810386 TCACTCATCTATCGGTCGAGAAG 59.190 47.826 0.00 0.00 0.00 2.85
251 284 3.562141 CACTCATCTATCGGTCGAGAAGT 59.438 47.826 0.00 0.00 0.00 3.01
252 285 3.562141 ACTCATCTATCGGTCGAGAAGTG 59.438 47.826 0.00 0.00 0.00 3.16
253 286 2.879026 TCATCTATCGGTCGAGAAGTGG 59.121 50.000 0.00 0.00 0.00 4.00
254 287 1.022735 TCTATCGGTCGAGAAGTGGC 58.977 55.000 0.00 0.00 0.00 5.01
255 288 0.030908 CTATCGGTCGAGAAGTGGCC 59.969 60.000 0.00 0.00 0.00 5.36
256 289 1.389609 TATCGGTCGAGAAGTGGCCC 61.390 60.000 0.00 0.00 0.00 5.80
257 290 4.796231 CGGTCGAGAAGTGGCCCG 62.796 72.222 0.00 0.00 0.00 6.13
258 291 4.452733 GGTCGAGAAGTGGCCCGG 62.453 72.222 0.00 0.00 0.00 5.73
259 292 4.452733 GTCGAGAAGTGGCCCGGG 62.453 72.222 19.09 19.09 0.00 5.73
260 293 4.689549 TCGAGAAGTGGCCCGGGA 62.690 66.667 29.31 0.00 0.00 5.14
261 294 3.702048 CGAGAAGTGGCCCGGGAA 61.702 66.667 29.31 8.87 0.00 3.97
262 295 2.046217 GAGAAGTGGCCCGGGAAC 60.046 66.667 29.31 21.93 0.00 3.62
286 319 1.614385 CGTCAATTAGTGCGTCTCGT 58.386 50.000 0.00 0.00 0.00 4.18
295 328 3.299340 AGTGCGTCTCGTGAGTAAAAT 57.701 42.857 0.00 0.00 0.00 1.82
296 329 3.650139 AGTGCGTCTCGTGAGTAAAATT 58.350 40.909 0.00 0.00 0.00 1.82
297 330 3.428870 AGTGCGTCTCGTGAGTAAAATTG 59.571 43.478 0.00 0.00 0.00 2.32
299 332 3.427528 TGCGTCTCGTGAGTAAAATTGTC 59.572 43.478 0.00 0.00 0.00 3.18
300 333 3.673809 GCGTCTCGTGAGTAAAATTGTCT 59.326 43.478 0.00 0.00 0.00 3.41
301 334 4.201504 GCGTCTCGTGAGTAAAATTGTCTC 60.202 45.833 0.00 0.00 0.00 3.36
302 335 5.154932 CGTCTCGTGAGTAAAATTGTCTCT 58.845 41.667 0.00 0.00 0.00 3.10
303 336 5.629849 CGTCTCGTGAGTAAAATTGTCTCTT 59.370 40.000 0.00 0.00 0.00 2.85
316 349 0.877743 GTCTCTTGGGTCTTGCTTGC 59.122 55.000 0.00 0.00 0.00 4.01
318 351 0.538057 CTCTTGGGTCTTGCTTGCCA 60.538 55.000 0.00 0.00 0.00 4.92
332 366 0.681887 TTGCCATCGAGTCCCGTCTA 60.682 55.000 0.00 0.00 39.75 2.59
346 380 2.986979 TCTACGTCTGGGCGTGCA 60.987 61.111 10.57 0.00 45.33 4.57
357 391 3.266964 GCGTGCAGCTCAATCCAA 58.733 55.556 0.00 0.00 44.04 3.53
358 392 1.136147 GCGTGCAGCTCAATCCAAG 59.864 57.895 0.00 0.00 44.04 3.61
359 393 1.580845 GCGTGCAGCTCAATCCAAGT 61.581 55.000 0.00 0.00 44.04 3.16
360 394 0.877071 CGTGCAGCTCAATCCAAGTT 59.123 50.000 0.00 0.00 0.00 2.66
361 395 1.135859 CGTGCAGCTCAATCCAAGTTC 60.136 52.381 0.00 0.00 0.00 3.01
368 402 3.823304 AGCTCAATCCAAGTTCAAAGTCC 59.177 43.478 0.00 0.00 0.00 3.85
373 407 1.524008 CCAAGTTCAAAGTCCCGCCC 61.524 60.000 0.00 0.00 0.00 6.13
374 408 1.599797 AAGTTCAAAGTCCCGCCCG 60.600 57.895 0.00 0.00 0.00 6.13
375 409 3.733960 GTTCAAAGTCCCGCCCGC 61.734 66.667 0.00 0.00 0.00 6.13
395 429 1.608283 CGGTGGAAGACCTCAGGTTTC 60.608 57.143 0.00 4.00 43.55 2.78
402 436 4.311606 GAAGACCTCAGGTTTCAGAGAAC 58.688 47.826 0.00 0.00 35.25 3.01
403 437 3.582164 AGACCTCAGGTTTCAGAGAACT 58.418 45.455 0.00 0.00 35.25 3.01
404 438 3.323403 AGACCTCAGGTTTCAGAGAACTG 59.677 47.826 0.00 0.00 39.79 3.16
405 439 2.370189 ACCTCAGGTTTCAGAGAACTGG 59.630 50.000 6.17 0.00 37.40 4.00
406 440 2.421619 CTCAGGTTTCAGAGAACTGGC 58.578 52.381 6.17 0.00 43.60 4.85
407 441 1.768275 TCAGGTTTCAGAGAACTGGCA 59.232 47.619 6.17 0.00 43.60 4.92
409 443 2.551459 CAGGTTTCAGAGAACTGGCAAG 59.449 50.000 0.00 0.00 43.60 4.01
410 444 2.173569 AGGTTTCAGAGAACTGGCAAGT 59.826 45.455 0.00 0.00 43.60 3.16
420 454 3.838244 AACTGGCAAGTTCTAGACACA 57.162 42.857 0.00 0.00 43.34 3.72
422 456 2.434336 ACTGGCAAGTTCTAGACACACA 59.566 45.455 0.00 0.00 30.14 3.72
423 457 2.802816 CTGGCAAGTTCTAGACACACAC 59.197 50.000 0.00 0.00 0.00 3.82
425 459 2.544267 GGCAAGTTCTAGACACACACAC 59.456 50.000 0.00 0.00 0.00 3.82
427 461 3.809832 GCAAGTTCTAGACACACACACAT 59.190 43.478 0.00 0.00 0.00 3.21
432 466 6.759272 AGTTCTAGACACACACACATTATGT 58.241 36.000 0.00 0.00 44.81 2.29
435 469 6.935167 TCTAGACACACACACATTATGTCAT 58.065 36.000 0.00 0.00 40.64 3.06
437 471 4.937620 AGACACACACACATTATGTCATCC 59.062 41.667 0.00 0.00 40.64 3.51
438 472 4.650734 ACACACACACATTATGTCATCCA 58.349 39.130 0.00 0.00 40.64 3.41
439 473 5.255687 ACACACACACATTATGTCATCCAT 58.744 37.500 0.00 0.00 40.64 3.41
440 474 5.355071 ACACACACACATTATGTCATCCATC 59.645 40.000 0.00 0.00 40.64 3.51
441 475 5.354792 CACACACACATTATGTCATCCATCA 59.645 40.000 0.00 0.00 40.64 3.07
442 476 5.587443 ACACACACATTATGTCATCCATCAG 59.413 40.000 0.00 0.00 40.64 2.90
443 477 5.008316 CACACACATTATGTCATCCATCAGG 59.992 44.000 0.00 0.00 40.64 3.86
445 479 5.824097 CACACATTATGTCATCCATCAGGAA 59.176 40.000 0.00 0.00 43.90 3.36
447 481 7.013942 CACACATTATGTCATCCATCAGGAATT 59.986 37.037 0.00 0.00 43.90 2.17
448 482 7.230108 ACACATTATGTCATCCATCAGGAATTC 59.770 37.037 0.00 0.00 42.74 2.17
459 493 5.360714 TCCATCAGGAATTCTAACCAAATGC 59.639 40.000 5.23 0.00 42.23 3.56
460 494 5.127519 CCATCAGGAATTCTAACCAAATGCA 59.872 40.000 5.23 0.00 36.89 3.96
461 495 5.902613 TCAGGAATTCTAACCAAATGCAG 57.097 39.130 5.23 0.00 0.00 4.41
462 496 4.706476 TCAGGAATTCTAACCAAATGCAGG 59.294 41.667 5.23 0.00 0.00 4.85
463 497 4.706476 CAGGAATTCTAACCAAATGCAGGA 59.294 41.667 5.23 0.00 0.00 3.86
464 498 5.361857 CAGGAATTCTAACCAAATGCAGGAT 59.638 40.000 5.23 0.00 0.00 3.24
465 499 6.547141 CAGGAATTCTAACCAAATGCAGGATA 59.453 38.462 5.23 0.00 0.00 2.59
466 500 7.068593 CAGGAATTCTAACCAAATGCAGGATAA 59.931 37.037 5.23 0.00 0.00 1.75
467 501 7.619302 AGGAATTCTAACCAAATGCAGGATAAA 59.381 33.333 5.23 0.00 0.00 1.40
468 502 8.424133 GGAATTCTAACCAAATGCAGGATAAAT 58.576 33.333 5.23 0.00 0.00 1.40
469 503 9.822185 GAATTCTAACCAAATGCAGGATAAATT 57.178 29.630 0.00 0.87 0.00 1.82
483 517 9.698309 TGCAGGATAAATTTTTAAATTGTTCGA 57.302 25.926 0.00 0.00 38.53 3.71
495 529 9.574458 TTTTAAATTGTTCGAAACTTCACATGA 57.426 25.926 0.00 0.00 0.00 3.07
496 530 8.781067 TTAAATTGTTCGAAACTTCACATGAG 57.219 30.769 0.00 0.00 0.00 2.90
497 531 4.811555 TTGTTCGAAACTTCACATGAGG 57.188 40.909 0.00 0.00 0.00 3.86
498 532 3.804036 TGTTCGAAACTTCACATGAGGT 58.196 40.909 0.00 0.00 35.79 3.85
507 541 3.011085 CACATGAGGTGCACAGTGT 57.989 52.632 20.43 13.71 41.36 3.55
508 542 0.870393 CACATGAGGTGCACAGTGTC 59.130 55.000 20.43 9.77 41.36 3.67
509 543 0.761187 ACATGAGGTGCACAGTGTCT 59.239 50.000 20.43 5.63 0.00 3.41
510 544 1.970640 ACATGAGGTGCACAGTGTCTA 59.029 47.619 20.43 0.00 0.00 2.59
511 545 2.368548 ACATGAGGTGCACAGTGTCTAA 59.631 45.455 20.43 0.00 0.00 2.10
512 546 3.008375 ACATGAGGTGCACAGTGTCTAAT 59.992 43.478 20.43 1.43 0.00 1.73
513 547 3.769739 TGAGGTGCACAGTGTCTAATT 57.230 42.857 20.43 0.00 0.00 1.40
514 548 3.664107 TGAGGTGCACAGTGTCTAATTC 58.336 45.455 20.43 0.00 0.00 2.17
515 549 3.003480 GAGGTGCACAGTGTCTAATTCC 58.997 50.000 20.43 0.00 0.00 3.01
516 550 2.639839 AGGTGCACAGTGTCTAATTCCT 59.360 45.455 20.43 0.00 0.00 3.36
517 551 3.003480 GGTGCACAGTGTCTAATTCCTC 58.997 50.000 20.43 0.00 0.00 3.71
518 552 3.557054 GGTGCACAGTGTCTAATTCCTCA 60.557 47.826 20.43 0.00 0.00 3.86
519 553 4.256920 GTGCACAGTGTCTAATTCCTCAT 58.743 43.478 13.17 0.00 0.00 2.90
520 554 5.419542 GTGCACAGTGTCTAATTCCTCATA 58.580 41.667 13.17 0.00 0.00 2.15
521 555 6.051717 GTGCACAGTGTCTAATTCCTCATAT 58.948 40.000 13.17 0.00 0.00 1.78
522 556 7.210174 GTGCACAGTGTCTAATTCCTCATATA 58.790 38.462 13.17 0.00 0.00 0.86
523 557 7.169982 GTGCACAGTGTCTAATTCCTCATATAC 59.830 40.741 13.17 0.00 0.00 1.47
524 558 7.069950 TGCACAGTGTCTAATTCCTCATATACT 59.930 37.037 1.61 0.00 0.00 2.12
525 559 8.577296 GCACAGTGTCTAATTCCTCATATACTA 58.423 37.037 1.61 0.00 0.00 1.82
526 560 9.900710 CACAGTGTCTAATTCCTCATATACTAC 57.099 37.037 0.00 0.00 0.00 2.73
527 561 9.642343 ACAGTGTCTAATTCCTCATATACTACA 57.358 33.333 0.00 0.00 0.00 2.74
556 590 9.573133 AATTGGAAATATCATTCTTCGTGAAAC 57.427 29.630 0.00 0.00 38.29 2.78
557 591 7.680442 TGGAAATATCATTCTTCGTGAAACA 57.320 32.000 0.00 0.00 38.29 2.83
558 592 8.105097 TGGAAATATCATTCTTCGTGAAACAA 57.895 30.769 0.00 0.00 38.29 2.83
559 593 8.572185 TGGAAATATCATTCTTCGTGAAACAAA 58.428 29.630 0.00 0.00 38.29 2.83
560 594 9.405587 GGAAATATCATTCTTCGTGAAACAAAA 57.594 29.630 0.00 0.00 38.29 2.44
563 597 6.695292 ATCATTCTTCGTGAAACAAAATGC 57.305 33.333 0.00 0.00 38.29 3.56
564 598 4.981674 TCATTCTTCGTGAAACAAAATGCC 59.018 37.500 0.00 0.00 38.29 4.40
565 599 2.993545 TCTTCGTGAAACAAAATGCCG 58.006 42.857 0.00 0.00 35.74 5.69
566 600 1.451651 CTTCGTGAAACAAAATGCCGC 59.548 47.619 0.00 0.00 35.74 6.53
567 601 0.665835 TCGTGAAACAAAATGCCGCT 59.334 45.000 0.00 0.00 35.74 5.52
568 602 1.066303 TCGTGAAACAAAATGCCGCTT 59.934 42.857 0.00 0.00 35.74 4.68
569 603 1.189884 CGTGAAACAAAATGCCGCTTG 59.810 47.619 0.00 0.00 35.74 4.01
570 604 2.468831 GTGAAACAAAATGCCGCTTGA 58.531 42.857 0.00 0.00 36.32 3.02
571 605 2.863137 GTGAAACAAAATGCCGCTTGAA 59.137 40.909 0.00 0.00 36.32 2.69
572 606 3.494251 GTGAAACAAAATGCCGCTTGAAT 59.506 39.130 0.00 0.00 36.32 2.57
573 607 4.683781 GTGAAACAAAATGCCGCTTGAATA 59.316 37.500 0.00 0.00 36.32 1.75
574 608 5.176590 GTGAAACAAAATGCCGCTTGAATAA 59.823 36.000 0.00 0.00 36.32 1.40
575 609 5.755375 TGAAACAAAATGCCGCTTGAATAAA 59.245 32.000 0.00 0.00 0.00 1.40
576 610 6.258727 TGAAACAAAATGCCGCTTGAATAAAA 59.741 30.769 0.00 0.00 0.00 1.52
577 611 6.610741 AACAAAATGCCGCTTGAATAAAAA 57.389 29.167 0.00 0.00 0.00 1.94
578 612 6.799926 ACAAAATGCCGCTTGAATAAAAAT 57.200 29.167 0.00 0.00 0.00 1.82
579 613 7.897575 ACAAAATGCCGCTTGAATAAAAATA 57.102 28.000 0.00 0.00 0.00 1.40
580 614 7.962917 ACAAAATGCCGCTTGAATAAAAATAG 58.037 30.769 0.00 0.00 0.00 1.73
581 615 6.588348 AAATGCCGCTTGAATAAAAATAGC 57.412 33.333 0.00 0.00 0.00 2.97
582 616 4.710423 TGCCGCTTGAATAAAAATAGCA 57.290 36.364 0.00 0.00 0.00 3.49
583 617 5.261209 TGCCGCTTGAATAAAAATAGCAT 57.739 34.783 0.00 0.00 0.00 3.79
584 618 5.042593 TGCCGCTTGAATAAAAATAGCATG 58.957 37.500 0.00 0.00 0.00 4.06
585 619 4.084900 GCCGCTTGAATAAAAATAGCATGC 60.085 41.667 10.51 10.51 0.00 4.06
586 620 5.042593 CCGCTTGAATAAAAATAGCATGCA 58.957 37.500 21.98 6.36 32.11 3.96
587 621 5.693104 CCGCTTGAATAAAAATAGCATGCAT 59.307 36.000 21.98 8.63 32.11 3.96
588 622 6.129009 CCGCTTGAATAAAAATAGCATGCATC 60.129 38.462 21.98 4.28 32.11 3.91
589 623 6.639686 CGCTTGAATAAAAATAGCATGCATCT 59.360 34.615 21.98 1.04 32.11 2.90
590 624 7.168637 CGCTTGAATAAAAATAGCATGCATCTT 59.831 33.333 21.98 7.03 32.11 2.40
591 625 8.823818 GCTTGAATAAAAATAGCATGCATCTTT 58.176 29.630 21.98 14.96 32.11 2.52
593 627 9.872721 TTGAATAAAAATAGCATGCATCTTTCA 57.127 25.926 21.98 13.63 0.00 2.69
603 637 6.387465 AGCATGCATCTTTCATATATGTTGC 58.613 36.000 21.98 13.72 34.71 4.17
604 638 5.285370 GCATGCATCTTTCATATATGTTGCG 59.715 40.000 14.21 5.66 0.00 4.85
605 639 6.376177 CATGCATCTTTCATATATGTTGCGT 58.624 36.000 12.42 12.23 0.00 5.24
606 640 5.989249 TGCATCTTTCATATATGTTGCGTC 58.011 37.500 12.42 0.02 0.00 5.19
607 641 5.526846 TGCATCTTTCATATATGTTGCGTCA 59.473 36.000 12.42 2.34 0.00 4.35
608 642 6.038050 TGCATCTTTCATATATGTTGCGTCAA 59.962 34.615 12.42 0.00 0.00 3.18
609 643 6.912051 GCATCTTTCATATATGTTGCGTCAAA 59.088 34.615 12.42 3.51 0.00 2.69
610 644 7.592533 GCATCTTTCATATATGTTGCGTCAAAT 59.407 33.333 12.42 0.00 0.00 2.32
611 645 9.454585 CATCTTTCATATATGTTGCGTCAAATT 57.545 29.630 12.42 0.00 0.00 1.82
650 684 9.818796 TTTTGTTTTGTTTTGAAACTAGAATGC 57.181 25.926 0.00 0.00 39.59 3.56
651 685 8.770438 TTGTTTTGTTTTGAAACTAGAATGCT 57.230 26.923 0.00 0.00 39.59 3.79
652 686 8.183830 TGTTTTGTTTTGAAACTAGAATGCTG 57.816 30.769 0.00 0.00 39.59 4.41
653 687 6.826893 TTTGTTTTGAAACTAGAATGCTGC 57.173 33.333 0.00 0.00 39.59 5.25
654 688 5.512753 TGTTTTGAAACTAGAATGCTGCA 57.487 34.783 4.13 4.13 39.59 4.41
655 689 6.088016 TGTTTTGAAACTAGAATGCTGCAT 57.912 33.333 9.81 9.81 39.59 3.96
656 690 6.151691 TGTTTTGAAACTAGAATGCTGCATC 58.848 36.000 16.55 9.50 39.59 3.91
657 691 6.016024 TGTTTTGAAACTAGAATGCTGCATCT 60.016 34.615 16.55 15.84 39.59 2.90
658 692 6.579666 TTTGAAACTAGAATGCTGCATCTT 57.420 33.333 16.55 9.60 0.00 2.40
659 693 5.556355 TGAAACTAGAATGCTGCATCTTG 57.444 39.130 16.55 16.01 0.00 3.02
660 694 5.247862 TGAAACTAGAATGCTGCATCTTGA 58.752 37.500 16.55 1.21 0.00 3.02
661 695 5.884232 TGAAACTAGAATGCTGCATCTTGAT 59.116 36.000 16.55 7.77 0.00 2.57
662 696 7.049754 TGAAACTAGAATGCTGCATCTTGATA 58.950 34.615 16.55 4.19 0.00 2.15
663 697 7.718314 TGAAACTAGAATGCTGCATCTTGATAT 59.282 33.333 16.55 0.00 0.00 1.63
664 698 7.436430 AACTAGAATGCTGCATCTTGATATG 57.564 36.000 16.55 4.15 0.00 1.78
665 699 6.531923 ACTAGAATGCTGCATCTTGATATGT 58.468 36.000 16.55 0.00 0.00 2.29
666 700 5.690997 AGAATGCTGCATCTTGATATGTG 57.309 39.130 16.55 0.00 0.00 3.21
667 701 3.917329 ATGCTGCATCTTGATATGTGC 57.083 42.857 9.81 0.00 38.05 4.57
668 702 2.645802 TGCTGCATCTTGATATGTGCA 58.354 42.857 0.00 0.00 44.50 4.57
671 705 3.564053 TGCATCTTGATATGTGCAGGA 57.436 42.857 0.00 0.00 42.13 3.86
672 706 3.888583 TGCATCTTGATATGTGCAGGAA 58.111 40.909 0.00 0.00 42.13 3.36
673 707 3.628942 TGCATCTTGATATGTGCAGGAAC 59.371 43.478 0.00 0.00 42.13 3.62
674 708 3.004106 GCATCTTGATATGTGCAGGAACC 59.996 47.826 0.00 0.00 37.52 3.62
675 709 3.998913 TCTTGATATGTGCAGGAACCA 57.001 42.857 0.00 0.00 0.00 3.67
676 710 3.877559 TCTTGATATGTGCAGGAACCAG 58.122 45.455 0.00 0.00 0.00 4.00
677 711 2.715749 TGATATGTGCAGGAACCAGG 57.284 50.000 0.00 0.00 0.00 4.45
678 712 2.195727 TGATATGTGCAGGAACCAGGA 58.804 47.619 0.00 0.00 0.00 3.86
679 713 2.575735 TGATATGTGCAGGAACCAGGAA 59.424 45.455 0.00 0.00 0.00 3.36
680 714 3.010027 TGATATGTGCAGGAACCAGGAAA 59.990 43.478 0.00 0.00 0.00 3.13
681 715 1.620822 ATGTGCAGGAACCAGGAAAC 58.379 50.000 0.00 0.00 0.00 2.78
700 734 5.482006 GAAACCTTTCCATTTCTTGGGATG 58.518 41.667 0.00 0.00 46.45 3.51
702 736 2.767960 CCTTTCCATTTCTTGGGATGGG 59.232 50.000 2.82 0.00 46.45 4.00
703 737 3.566332 CCTTTCCATTTCTTGGGATGGGA 60.566 47.826 2.82 0.00 46.45 4.37
705 739 4.351110 TTCCATTTCTTGGGATGGGATT 57.649 40.909 2.82 0.00 46.45 3.01
706 740 4.351110 TCCATTTCTTGGGATGGGATTT 57.649 40.909 2.82 0.00 46.45 2.17
709 743 4.225717 CCATTTCTTGGGATGGGATTTTGT 59.774 41.667 0.00 0.00 42.33 2.83
711 745 6.407299 CCATTTCTTGGGATGGGATTTTGTAG 60.407 42.308 0.00 0.00 42.33 2.74
713 747 2.452600 TGGGATGGGATTTTGTAGCC 57.547 50.000 0.00 0.00 0.00 3.93
714 748 1.318576 GGGATGGGATTTTGTAGCCG 58.681 55.000 0.00 0.00 0.00 5.52
715 749 1.133915 GGGATGGGATTTTGTAGCCGA 60.134 52.381 0.00 0.00 0.00 5.54
716 750 2.489073 GGGATGGGATTTTGTAGCCGAT 60.489 50.000 0.00 0.00 0.00 4.18
717 751 2.814336 GGATGGGATTTTGTAGCCGATC 59.186 50.000 0.00 0.00 36.53 3.69
718 752 2.341846 TGGGATTTTGTAGCCGATCC 57.658 50.000 0.00 0.00 37.84 3.36
719 753 1.843851 TGGGATTTTGTAGCCGATCCT 59.156 47.619 0.00 0.00 38.46 3.24
720 754 2.241176 TGGGATTTTGTAGCCGATCCTT 59.759 45.455 0.00 0.00 38.46 3.36
721 755 2.618709 GGGATTTTGTAGCCGATCCTTG 59.381 50.000 0.00 0.00 38.46 3.61
722 756 3.541632 GGATTTTGTAGCCGATCCTTGA 58.458 45.455 0.00 0.00 36.09 3.02
723 757 3.945285 GGATTTTGTAGCCGATCCTTGAA 59.055 43.478 0.00 0.00 36.09 2.69
724 758 4.201920 GGATTTTGTAGCCGATCCTTGAAC 60.202 45.833 0.00 0.00 36.09 3.18
725 759 2.396590 TTGTAGCCGATCCTTGAACC 57.603 50.000 0.00 0.00 0.00 3.62
726 760 0.174845 TGTAGCCGATCCTTGAACCG 59.825 55.000 0.00 0.00 0.00 4.44
727 761 0.458669 GTAGCCGATCCTTGAACCGA 59.541 55.000 0.00 0.00 0.00 4.69
728 762 1.134907 GTAGCCGATCCTTGAACCGAA 60.135 52.381 0.00 0.00 0.00 4.30
766 820 0.325203 AAGCAACCAAACCACCCACT 60.325 50.000 0.00 0.00 0.00 4.00
815 869 1.226435 GCAACGCAACGACAAACCA 60.226 52.632 0.00 0.00 0.00 3.67
816 870 1.468340 GCAACGCAACGACAAACCAC 61.468 55.000 0.00 0.00 0.00 4.16
940 1031 2.770048 AGCCCCGCCTCTGCTAAT 60.770 61.111 0.00 0.00 32.56 1.73
1228 1354 0.034059 CTGGTCGTGCTCCTTCTGTT 59.966 55.000 0.00 0.00 0.00 3.16
1265 1391 0.314935 ACAATTTCTGCCGCCAACTG 59.685 50.000 0.00 0.00 0.00 3.16
1284 1410 5.806654 ACTGGGTGCAACAAAGATTAATT 57.193 34.783 3.06 0.00 39.98 1.40
1285 1411 6.909550 ACTGGGTGCAACAAAGATTAATTA 57.090 33.333 3.06 0.00 39.98 1.40
1286 1412 6.924111 ACTGGGTGCAACAAAGATTAATTAG 58.076 36.000 3.06 0.00 39.98 1.73
1287 1413 6.493458 ACTGGGTGCAACAAAGATTAATTAGT 59.507 34.615 3.06 0.00 39.98 2.24
1288 1414 7.668052 ACTGGGTGCAACAAAGATTAATTAGTA 59.332 33.333 3.06 0.00 39.98 1.82
1289 1415 7.822658 TGGGTGCAACAAAGATTAATTAGTAC 58.177 34.615 3.06 0.00 39.98 2.73
1290 1416 7.094118 TGGGTGCAACAAAGATTAATTAGTACC 60.094 37.037 3.06 0.00 39.98 3.34
1291 1417 7.094118 GGGTGCAACAAAGATTAATTAGTACCA 60.094 37.037 3.06 0.00 39.98 3.25
1292 1418 7.753580 GGTGCAACAAAGATTAATTAGTACCAC 59.246 37.037 0.00 0.00 39.98 4.16
1293 1419 7.753580 GTGCAACAAAGATTAATTAGTACCACC 59.246 37.037 0.00 0.00 36.32 4.61
1294 1420 7.448777 TGCAACAAAGATTAATTAGTACCACCA 59.551 33.333 0.00 0.00 0.00 4.17
1295 1421 7.753580 GCAACAAAGATTAATTAGTACCACCAC 59.246 37.037 0.00 0.00 0.00 4.16
1314 1440 4.281182 ACCACTACACCGGATAAGATGATC 59.719 45.833 9.46 0.00 0.00 2.92
1407 1550 0.179097 GTCCCGCTCCTGTGATCTTC 60.179 60.000 0.00 0.00 0.00 2.87
1422 1565 5.354767 GTGATCTTCACATGTCAGCTATCA 58.645 41.667 0.00 0.00 46.22 2.15
1439 1592 8.725148 TCAGCTATCATTTTCTGTTTCTTCTTC 58.275 33.333 0.00 0.00 0.00 2.87
1450 1604 6.498304 TCTGTTTCTTCTTCAATCAAGTTGC 58.502 36.000 0.00 0.00 37.74 4.17
1454 1608 5.186996 TCTTCTTCAATCAAGTTGCCAAC 57.813 39.130 0.00 0.00 37.74 3.77
1465 1619 5.923204 TCAAGTTGCCAACAAAATATGGTT 58.077 33.333 10.69 0.00 37.58 3.67
1472 1626 5.221803 TGCCAACAAAATATGGTTCCATGTT 60.222 36.000 13.86 10.71 39.00 2.71
1508 1662 3.668656 GCCTTGAAAATTGCGAGTACAAC 59.331 43.478 0.00 0.00 31.03 3.32
1509 1663 4.791411 GCCTTGAAAATTGCGAGTACAACA 60.791 41.667 0.00 0.00 31.03 3.33
1512 1666 6.254589 CCTTGAAAATTGCGAGTACAACAAAA 59.745 34.615 0.00 0.00 31.03 2.44
1513 1667 7.201478 CCTTGAAAATTGCGAGTACAACAAAAA 60.201 33.333 0.00 0.00 31.03 1.94
1541 1695 9.956640 AATCATCAAACTTTCTTCTGATCTAGT 57.043 29.630 0.00 0.00 0.00 2.57
1543 1697 9.862371 TCATCAAACTTTCTTCTGATCTAGTAC 57.138 33.333 0.00 0.00 0.00 2.73
1544 1698 9.645059 CATCAAACTTTCTTCTGATCTAGTACA 57.355 33.333 0.00 0.00 0.00 2.90
1574 1728 9.561069 AACAGAGTAATAGACTTTTCACAATGT 57.439 29.630 0.00 0.00 39.06 2.71
1575 1729 9.561069 ACAGAGTAATAGACTTTTCACAATGTT 57.439 29.630 0.00 0.00 39.06 2.71
1643 1797 6.757947 GCTTTTGATGGCATATAACACATGTT 59.242 34.615 0.00 2.32 41.73 2.71
1650 1804 9.964303 GATGGCATATAACACATGTTTGATTAA 57.036 29.630 0.00 0.00 39.31 1.40
1671 1825 4.970662 ATCATCAAAATCAACGACCTGG 57.029 40.909 0.00 0.00 0.00 4.45
1699 1853 1.103398 GCACACCATATGCACCCCTC 61.103 60.000 0.00 0.00 42.88 4.30
1702 1856 1.383943 ACCATATGCACCCCTCCGA 60.384 57.895 0.00 0.00 0.00 4.55
1705 1859 0.036010 CATATGCACCCCTCCGATCC 60.036 60.000 0.00 0.00 0.00 3.36
1728 1882 1.070601 AGGGAGTGGCATTTTGTTTGC 59.929 47.619 0.00 0.00 39.41 3.68
1739 1893 8.555361 GTGGCATTTTGTTTGCTATTTCTTTAA 58.445 29.630 0.00 0.00 40.03 1.52
1740 1894 9.282569 TGGCATTTTGTTTGCTATTTCTTTAAT 57.717 25.926 0.00 0.00 40.03 1.40
1741 1895 9.759259 GGCATTTTGTTTGCTATTTCTTTAATC 57.241 29.630 0.00 0.00 40.03 1.75
1748 1902 8.977505 TGTTTGCTATTTCTTTAATCAAGTTGC 58.022 29.630 0.00 0.00 33.66 4.17
1749 1903 8.435430 GTTTGCTATTTCTTTAATCAAGTTGCC 58.565 33.333 0.00 0.00 33.66 4.52
1750 1904 6.321717 TGCTATTTCTTTAATCAAGTTGCCG 58.678 36.000 0.00 0.00 33.66 5.69
1751 1905 6.150307 TGCTATTTCTTTAATCAAGTTGCCGA 59.850 34.615 0.00 0.00 33.66 5.54
1752 1906 6.469275 GCTATTTCTTTAATCAAGTTGCCGAC 59.531 38.462 0.00 0.00 33.66 4.79
1758 2104 8.050778 TCTTTAATCAAGTTGCCGACAAATAT 57.949 30.769 0.00 0.00 37.58 1.28
1771 2117 4.438797 CCGACAAATATAGTACCGTGTTCG 59.561 45.833 0.00 0.00 0.00 3.95
1816 2162 6.521151 AAAATGAGAGGTCAGCTTTAATGG 57.479 37.500 0.00 0.00 35.66 3.16
1845 2191 5.324409 TGCATCCAACTTTATTCTGGAACT 58.676 37.500 0.00 0.00 42.41 3.01
1853 2199 9.244799 CCAACTTTATTCTGGAACTAAACAAAC 57.755 33.333 0.00 0.00 31.38 2.93
1883 2229 7.530426 AATACACTTTTCAAGATGCTTTCCT 57.470 32.000 0.00 0.00 0.00 3.36
1895 2241 2.508526 TGCTTTCCTCTTCTGCTTTCC 58.491 47.619 0.00 0.00 0.00 3.13
1899 2245 4.794329 GCTTTCCTCTTCTGCTTTCCAAAC 60.794 45.833 0.00 0.00 0.00 2.93
1960 2311 2.818432 TCTTCAGGAGACACGAGTAACC 59.182 50.000 0.00 0.00 0.00 2.85
2056 2453 2.280971 CACGCTTCAGACATGAGAATCG 59.719 50.000 15.96 15.96 38.61 3.34
2116 2513 5.394224 GGATTTCCTAGAGGATCCGTTAG 57.606 47.826 5.98 11.76 44.98 2.34
2120 2517 4.018484 TCCTAGAGGATCCGTTAGTAGC 57.982 50.000 18.51 0.78 39.78 3.58
2146 2543 5.520376 GCAATCAGCAATATTAGTTGGGT 57.480 39.130 0.00 0.00 44.79 4.51
2162 2559 1.988817 GGTACCTCGGGAGCCTTTT 59.011 57.895 4.06 0.00 0.00 2.27
2181 2578 0.107643 TGTTCCGCATCAGTCACCAA 59.892 50.000 0.00 0.00 0.00 3.67
2221 2618 8.642935 TGAAATGGACATAAACCTAATCACAA 57.357 30.769 0.00 0.00 0.00 3.33
2346 2744 6.910536 AATAAGTCCGCAAAGATTGAGTAG 57.089 37.500 0.00 0.00 0.00 2.57
2423 2833 2.068519 TGATTGTGATCTGACGTGCAC 58.931 47.619 6.82 6.82 33.28 4.57
2425 2835 5.946975 TGATTGTGATCTGACGTGCACGT 62.947 47.826 42.32 42.32 43.14 4.49
2467 2877 5.627182 AAGTCCACTATTCTGCTGATGAT 57.373 39.130 0.00 0.00 0.00 2.45
2474 2884 2.616634 TTCTGCTGATGATGCTCTCC 57.383 50.000 0.00 0.00 0.00 3.71
2520 2949 5.176223 GCAATGGTGTTTGAGAAATTCACAG 59.824 40.000 0.00 0.00 34.94 3.66
2617 3046 2.108168 CTCCCTTACCTGAATGACCGA 58.892 52.381 0.00 0.00 0.00 4.69
2715 3145 8.722480 TTGCCTATCTAATATGTGTATGCATC 57.278 34.615 0.19 0.00 0.00 3.91
2809 3285 7.209475 TCATTCTTTGACAGGTTTGAATTTCC 58.791 34.615 0.00 0.00 0.00 3.13
2821 3297 7.829211 CAGGTTTGAATTTCCCTCTGATAACTA 59.171 37.037 0.00 0.00 0.00 2.24
2824 3300 9.178758 GTTTGAATTTCCCTCTGATAACTACAT 57.821 33.333 0.00 0.00 0.00 2.29
2852 3328 5.782047 TGATAAAAGCCAACCAAGATGTTG 58.218 37.500 0.00 0.00 44.12 3.33
2893 3369 8.928733 TGAGTGATCACGGTTTAATAACTTTAC 58.071 33.333 19.85 0.00 34.59 2.01
2952 3430 1.079681 TGTTGGCATACCGTCGGTC 60.080 57.895 22.74 7.07 39.70 4.79
3022 3500 4.760204 AGGTGTGCGCTTATTTTTCTTAGT 59.240 37.500 9.73 0.00 0.00 2.24
3093 3571 5.140454 ACTCAAAAATCCTACAGGCAGTTT 58.860 37.500 0.00 0.00 34.44 2.66
3188 3675 8.281893 GTGGTCTACAATACTAATCTCGTCTAC 58.718 40.741 0.00 0.00 0.00 2.59
3191 3678 9.649024 GTCTACAATACTAATCTCGTCTACAAC 57.351 37.037 0.00 0.00 0.00 3.32
3374 3862 1.338973 TGCTCTTCAAGGCAAAGCTTG 59.661 47.619 0.00 0.00 35.40 4.01
3434 3922 6.486657 TGAAGAAAGGACTCACTATTTGGTTG 59.513 38.462 0.00 0.00 0.00 3.77
3533 4022 4.019174 CTGGTGATCCTTATGCAAAGGTT 58.981 43.478 20.22 15.04 38.55 3.50
3680 4171 4.907809 ACTCATATGCTAATGCTGATGCT 58.092 39.130 0.00 0.00 40.48 3.79
3734 4233 6.860023 ACGAGTTAGATAACACCATTATACGC 59.140 38.462 5.59 0.00 38.62 4.42
3736 4235 7.060748 CGAGTTAGATAACACCATTATACGCAG 59.939 40.741 5.59 0.00 38.62 5.18
3833 4343 5.753744 CGTTCAGTTTTTACACCATTGCTA 58.246 37.500 0.00 0.00 0.00 3.49
3936 4455 4.153117 CCATCGCTATTGAGGTATTTGAGC 59.847 45.833 0.00 0.00 0.00 4.26
3943 4462 7.171508 CGCTATTGAGGTATTTGAGCATTTCTA 59.828 37.037 0.00 0.00 0.00 2.10
4726 5278 2.186384 CGCAGGCAGGAGGAGAAG 59.814 66.667 0.00 0.00 0.00 2.85
4826 5379 9.862371 TTATAAATACACGCCACATGAATTTTT 57.138 25.926 0.00 0.00 0.00 1.94
4876 5429 3.447586 TCCTTCTTACCTCAGGAATGACG 59.552 47.826 0.00 0.00 33.53 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 4.715523 ATCCAACCACCACCGCCG 62.716 66.667 0.00 0.00 0.00 6.46
50 59 0.900421 ACGGGTTAGTTGAGTAGGGC 59.100 55.000 0.00 0.00 0.00 5.19
87 99 2.908428 GGAAAAACCACGGGCCGT 60.908 61.111 28.83 28.83 42.36 5.68
88 100 3.676605 GGGAAAAACCACGGGCCG 61.677 66.667 27.06 27.06 41.20 6.13
95 107 1.151908 CACCTCCGGGGAAAAACCA 59.848 57.895 0.37 0.00 41.20 3.67
96 108 0.178984 TTCACCTCCGGGGAAAAACC 60.179 55.000 0.37 0.00 38.76 3.27
97 109 1.338973 GTTTCACCTCCGGGGAAAAAC 59.661 52.381 11.58 13.88 35.31 2.43
98 110 1.694844 GTTTCACCTCCGGGGAAAAA 58.305 50.000 11.58 6.20 35.31 1.94
170 203 2.223433 GCAAGAAAATGATCTGCCGAGG 60.223 50.000 0.00 0.00 0.00 4.63
188 221 0.512952 GCGCTCTTTCTTTCTCGCAA 59.487 50.000 0.00 0.00 41.84 4.85
191 224 1.433534 AAGGCGCTCTTTCTTTCTCG 58.566 50.000 7.64 0.00 29.99 4.04
206 239 3.515286 TTGCGTTGCGTCGAAAGGC 62.515 57.895 21.11 21.11 38.55 4.35
207 240 1.438710 CTTGCGTTGCGTCGAAAGG 60.439 57.895 11.65 1.11 41.27 3.11
208 241 4.099924 CTTGCGTTGCGTCGAAAG 57.900 55.556 0.00 6.67 39.58 2.62
209 242 0.097325 AAACTTGCGTTGCGTCGAAA 59.903 45.000 0.00 0.00 32.65 3.46
210 243 0.315544 GAAACTTGCGTTGCGTCGAA 60.316 50.000 0.00 0.00 32.65 3.71
211 244 1.274476 GAAACTTGCGTTGCGTCGA 59.726 52.632 0.00 0.00 32.65 4.20
212 245 1.011684 TGAAACTTGCGTTGCGTCG 60.012 52.632 0.00 0.00 30.75 5.12
213 246 2.480593 GTGAAACTTGCGTTGCGTC 58.519 52.632 0.00 0.00 30.75 5.19
214 247 4.682306 GTGAAACTTGCGTTGCGT 57.318 50.000 0.00 0.00 30.75 5.24
217 250 5.722321 CGATAGATGAGTGAAACTTGCGTTG 60.722 44.000 0.00 0.00 46.18 4.10
218 251 4.327357 CGATAGATGAGTGAAACTTGCGTT 59.673 41.667 0.00 0.00 46.18 4.84
219 252 3.859961 CGATAGATGAGTGAAACTTGCGT 59.140 43.478 0.00 0.00 46.18 5.24
220 253 3.243877 CCGATAGATGAGTGAAACTTGCG 59.756 47.826 0.00 0.00 46.18 4.85
221 254 4.184629 ACCGATAGATGAGTGAAACTTGC 58.815 43.478 0.00 0.00 46.18 4.01
222 255 4.500837 CGACCGATAGATGAGTGAAACTTG 59.499 45.833 0.00 0.00 46.18 3.16
223 256 4.398358 TCGACCGATAGATGAGTGAAACTT 59.602 41.667 0.00 0.00 46.18 2.66
225 258 4.035324 TCTCGACCGATAGATGAGTGAAAC 59.965 45.833 0.00 0.00 39.76 2.78
226 259 4.196971 TCTCGACCGATAGATGAGTGAAA 58.803 43.478 0.00 0.00 39.76 2.69
227 260 3.805207 TCTCGACCGATAGATGAGTGAA 58.195 45.455 0.00 0.00 39.76 3.18
228 261 3.470645 TCTCGACCGATAGATGAGTGA 57.529 47.619 0.00 0.00 39.76 3.41
229 262 3.562141 ACTTCTCGACCGATAGATGAGTG 59.438 47.826 8.13 0.00 39.76 3.51
230 263 3.562141 CACTTCTCGACCGATAGATGAGT 59.438 47.826 8.13 0.00 39.76 3.41
231 264 3.058570 CCACTTCTCGACCGATAGATGAG 60.059 52.174 8.13 0.00 39.76 2.90
232 265 2.879026 CCACTTCTCGACCGATAGATGA 59.121 50.000 8.13 0.00 39.76 2.92
233 266 2.605823 GCCACTTCTCGACCGATAGATG 60.606 54.545 8.13 2.41 39.76 2.90
234 267 1.609555 GCCACTTCTCGACCGATAGAT 59.390 52.381 8.13 0.00 39.76 1.98
235 268 1.022735 GCCACTTCTCGACCGATAGA 58.977 55.000 8.13 0.00 39.76 1.98
236 269 0.030908 GGCCACTTCTCGACCGATAG 59.969 60.000 0.00 0.00 0.00 2.08
237 270 1.389609 GGGCCACTTCTCGACCGATA 61.390 60.000 4.39 0.00 0.00 2.92
238 271 2.722201 GGGCCACTTCTCGACCGAT 61.722 63.158 4.39 0.00 0.00 4.18
239 272 3.379445 GGGCCACTTCTCGACCGA 61.379 66.667 4.39 0.00 0.00 4.69
240 273 4.796231 CGGGCCACTTCTCGACCG 62.796 72.222 4.39 0.00 35.01 4.79
241 274 4.452733 CCGGGCCACTTCTCGACC 62.453 72.222 4.39 0.00 0.00 4.79
242 275 4.452733 CCCGGGCCACTTCTCGAC 62.453 72.222 8.08 0.00 0.00 4.20
243 276 4.689549 TCCCGGGCCACTTCTCGA 62.690 66.667 18.49 0.00 0.00 4.04
244 277 3.702048 TTCCCGGGCCACTTCTCG 61.702 66.667 18.49 0.00 0.00 4.04
245 278 2.046217 GTTCCCGGGCCACTTCTC 60.046 66.667 18.49 0.00 0.00 2.87
246 279 3.647771 GGTTCCCGGGCCACTTCT 61.648 66.667 18.49 0.00 0.00 2.85
247 280 3.501040 TTGGTTCCCGGGCCACTTC 62.501 63.158 18.49 3.82 34.02 3.01
248 281 3.503839 TTGGTTCCCGGGCCACTT 61.504 61.111 18.49 0.00 34.02 3.16
249 282 3.966543 CTTGGTTCCCGGGCCACT 61.967 66.667 18.49 0.00 34.02 4.00
254 287 3.835790 TTGACGCTTGGTTCCCGGG 62.836 63.158 16.85 16.85 0.00 5.73
255 288 1.241315 AATTGACGCTTGGTTCCCGG 61.241 55.000 0.00 0.00 0.00 5.73
256 289 1.396996 CTAATTGACGCTTGGTTCCCG 59.603 52.381 0.00 0.00 0.00 5.14
257 290 2.161609 CACTAATTGACGCTTGGTTCCC 59.838 50.000 0.00 0.00 0.00 3.97
258 291 2.414161 GCACTAATTGACGCTTGGTTCC 60.414 50.000 0.00 0.00 0.00 3.62
259 292 2.724839 CGCACTAATTGACGCTTGGTTC 60.725 50.000 0.00 0.00 0.00 3.62
260 293 1.196808 CGCACTAATTGACGCTTGGTT 59.803 47.619 0.00 0.00 0.00 3.67
261 294 0.796312 CGCACTAATTGACGCTTGGT 59.204 50.000 0.00 0.00 0.00 3.67
262 295 0.796312 ACGCACTAATTGACGCTTGG 59.204 50.000 0.00 0.00 0.00 3.61
263 296 1.726791 AGACGCACTAATTGACGCTTG 59.273 47.619 0.00 0.00 0.00 4.01
264 297 1.993370 GAGACGCACTAATTGACGCTT 59.007 47.619 0.00 0.00 0.00 4.68
265 298 1.630148 GAGACGCACTAATTGACGCT 58.370 50.000 0.00 0.00 0.00 5.07
266 299 0.294887 CGAGACGCACTAATTGACGC 59.705 55.000 0.00 0.00 0.00 5.19
267 300 1.317611 CACGAGACGCACTAATTGACG 59.682 52.381 0.00 0.00 0.00 4.35
268 301 2.592194 TCACGAGACGCACTAATTGAC 58.408 47.619 0.00 0.00 0.00 3.18
269 302 2.228103 ACTCACGAGACGCACTAATTGA 59.772 45.455 0.00 0.00 0.00 2.57
270 303 2.596452 ACTCACGAGACGCACTAATTG 58.404 47.619 0.00 0.00 0.00 2.32
271 304 4.430137 TTACTCACGAGACGCACTAATT 57.570 40.909 0.00 0.00 0.00 1.40
272 305 4.430137 TTTACTCACGAGACGCACTAAT 57.570 40.909 0.00 0.00 0.00 1.73
273 306 3.902261 TTTACTCACGAGACGCACTAA 57.098 42.857 0.00 0.00 0.00 2.24
286 319 6.187727 AGACCCAAGAGACAATTTTACTCA 57.812 37.500 0.00 0.00 33.69 3.41
295 328 2.575532 CAAGCAAGACCCAAGAGACAA 58.424 47.619 0.00 0.00 0.00 3.18
296 329 1.815408 GCAAGCAAGACCCAAGAGACA 60.815 52.381 0.00 0.00 0.00 3.41
297 330 0.877743 GCAAGCAAGACCCAAGAGAC 59.122 55.000 0.00 0.00 0.00 3.36
299 332 0.538057 TGGCAAGCAAGACCCAAGAG 60.538 55.000 0.00 0.00 0.00 2.85
300 333 0.112995 ATGGCAAGCAAGACCCAAGA 59.887 50.000 0.00 0.00 0.00 3.02
301 334 0.529378 GATGGCAAGCAAGACCCAAG 59.471 55.000 0.00 0.00 0.00 3.61
302 335 1.243342 CGATGGCAAGCAAGACCCAA 61.243 55.000 0.00 0.00 0.00 4.12
303 336 1.675310 CGATGGCAAGCAAGACCCA 60.675 57.895 0.00 0.00 0.00 4.51
316 349 1.094073 ACGTAGACGGGACTCGATGG 61.094 60.000 0.00 0.00 44.95 3.51
318 351 0.177604 AGACGTAGACGGGACTCGAT 59.822 55.000 0.00 0.00 44.95 3.59
346 380 3.823304 GGACTTTGAACTTGGATTGAGCT 59.177 43.478 0.00 0.00 0.00 4.09
355 389 1.852067 CGGGCGGGACTTTGAACTTG 61.852 60.000 0.00 0.00 0.00 3.16
356 390 1.599797 CGGGCGGGACTTTGAACTT 60.600 57.895 0.00 0.00 0.00 2.66
357 391 2.032071 CGGGCGGGACTTTGAACT 59.968 61.111 0.00 0.00 0.00 3.01
358 392 3.733960 GCGGGCGGGACTTTGAAC 61.734 66.667 0.00 0.00 0.00 3.18
384 418 2.370189 CCAGTTCTCTGAAACCTGAGGT 59.630 50.000 0.00 0.00 43.76 3.85
402 436 2.802816 GTGTGTGTCTAGAACTTGCCAG 59.197 50.000 0.00 0.00 0.00 4.85
403 437 2.169561 TGTGTGTGTCTAGAACTTGCCA 59.830 45.455 0.00 0.00 0.00 4.92
404 438 2.544267 GTGTGTGTGTCTAGAACTTGCC 59.456 50.000 0.00 0.00 0.00 4.52
405 439 3.194861 TGTGTGTGTGTCTAGAACTTGC 58.805 45.455 0.00 0.00 0.00 4.01
406 440 5.991328 AATGTGTGTGTGTCTAGAACTTG 57.009 39.130 0.00 0.00 0.00 3.16
407 441 7.217200 ACATAATGTGTGTGTGTCTAGAACTT 58.783 34.615 0.00 0.00 40.28 2.66
409 443 6.645003 TGACATAATGTGTGTGTGTCTAGAAC 59.355 38.462 0.00 0.00 42.36 3.01
410 444 6.754193 TGACATAATGTGTGTGTGTCTAGAA 58.246 36.000 0.00 0.00 42.36 2.10
412 446 6.256539 GGATGACATAATGTGTGTGTGTCTAG 59.743 42.308 0.00 0.00 42.36 2.43
413 447 6.106003 GGATGACATAATGTGTGTGTGTCTA 58.894 40.000 0.00 0.00 42.36 2.59
414 448 4.937620 GGATGACATAATGTGTGTGTGTCT 59.062 41.667 0.00 0.00 42.36 3.41
415 449 4.694982 TGGATGACATAATGTGTGTGTGTC 59.305 41.667 0.00 0.00 42.36 3.67
417 451 5.354792 TGATGGATGACATAATGTGTGTGTG 59.645 40.000 0.00 0.00 42.36 3.82
419 453 5.008316 CCTGATGGATGACATAATGTGTGTG 59.992 44.000 0.00 0.00 40.72 3.82
420 454 5.104402 TCCTGATGGATGACATAATGTGTGT 60.104 40.000 0.00 0.00 40.72 3.72
422 456 5.635278 TCCTGATGGATGACATAATGTGT 57.365 39.130 0.00 0.00 40.72 3.72
423 457 7.447545 AGAATTCCTGATGGATGACATAATGTG 59.552 37.037 0.65 0.00 42.81 3.21
425 459 7.997773 AGAATTCCTGATGGATGACATAATG 57.002 36.000 0.65 0.00 42.81 1.90
427 461 7.939039 GGTTAGAATTCCTGATGGATGACATAA 59.061 37.037 0.65 0.00 42.81 1.90
432 466 5.974156 TGGTTAGAATTCCTGATGGATGA 57.026 39.130 0.65 0.00 42.81 2.92
435 469 5.360714 GCATTTGGTTAGAATTCCTGATGGA 59.639 40.000 0.65 0.00 41.36 3.41
437 471 6.211587 TGCATTTGGTTAGAATTCCTGATG 57.788 37.500 0.65 0.00 0.00 3.07
438 472 5.361857 CCTGCATTTGGTTAGAATTCCTGAT 59.638 40.000 0.65 0.00 0.00 2.90
439 473 4.706476 CCTGCATTTGGTTAGAATTCCTGA 59.294 41.667 0.65 0.00 0.00 3.86
440 474 4.706476 TCCTGCATTTGGTTAGAATTCCTG 59.294 41.667 0.65 0.00 0.00 3.86
441 475 4.934356 TCCTGCATTTGGTTAGAATTCCT 58.066 39.130 0.65 0.00 0.00 3.36
442 476 5.859205 ATCCTGCATTTGGTTAGAATTCC 57.141 39.130 0.65 0.00 0.00 3.01
443 477 9.822185 AATTTATCCTGCATTTGGTTAGAATTC 57.178 29.630 0.00 0.00 0.00 2.17
457 491 9.698309 TCGAACAATTTAAAAATTTATCCTGCA 57.302 25.926 0.00 0.00 36.52 4.41
469 503 9.574458 TCATGTGAAGTTTCGAACAATTTAAAA 57.426 25.926 0.00 0.00 0.00 1.52
470 504 9.232082 CTCATGTGAAGTTTCGAACAATTTAAA 57.768 29.630 0.00 0.00 0.00 1.52
471 505 7.860373 CCTCATGTGAAGTTTCGAACAATTTAA 59.140 33.333 0.00 0.00 0.00 1.52
472 506 7.012894 ACCTCATGTGAAGTTTCGAACAATTTA 59.987 33.333 0.00 0.00 0.00 1.40
473 507 6.183360 ACCTCATGTGAAGTTTCGAACAATTT 60.183 34.615 0.00 0.00 0.00 1.82
474 508 5.299279 ACCTCATGTGAAGTTTCGAACAATT 59.701 36.000 0.00 0.00 0.00 2.32
475 509 4.821805 ACCTCATGTGAAGTTTCGAACAAT 59.178 37.500 0.00 0.00 0.00 2.71
476 510 4.196193 ACCTCATGTGAAGTTTCGAACAA 58.804 39.130 0.00 0.00 0.00 2.83
477 511 3.804036 ACCTCATGTGAAGTTTCGAACA 58.196 40.909 0.00 0.00 0.00 3.18
490 524 0.761187 AGACACTGTGCACCTCATGT 59.239 50.000 15.69 12.85 0.00 3.21
491 525 2.749280 TAGACACTGTGCACCTCATG 57.251 50.000 15.69 9.61 0.00 3.07
492 526 3.988976 ATTAGACACTGTGCACCTCAT 57.011 42.857 15.69 0.00 0.00 2.90
493 527 3.557054 GGAATTAGACACTGTGCACCTCA 60.557 47.826 15.69 0.00 0.00 3.86
494 528 3.003480 GGAATTAGACACTGTGCACCTC 58.997 50.000 15.69 3.63 0.00 3.85
495 529 2.639839 AGGAATTAGACACTGTGCACCT 59.360 45.455 15.69 6.07 0.00 4.00
496 530 3.003480 GAGGAATTAGACACTGTGCACC 58.997 50.000 15.69 0.00 0.00 5.01
497 531 3.664107 TGAGGAATTAGACACTGTGCAC 58.336 45.455 10.75 10.75 0.00 4.57
498 532 4.558226 ATGAGGAATTAGACACTGTGCA 57.442 40.909 7.90 0.00 0.00 4.57
499 533 7.437748 AGTATATGAGGAATTAGACACTGTGC 58.562 38.462 7.90 0.82 0.00 4.57
500 534 9.900710 GTAGTATATGAGGAATTAGACACTGTG 57.099 37.037 6.19 6.19 0.00 3.66
501 535 9.642343 TGTAGTATATGAGGAATTAGACACTGT 57.358 33.333 0.00 0.00 0.00 3.55
530 564 9.573133 GTTTCACGAAGAATGATATTTCCAATT 57.427 29.630 0.00 0.00 35.83 2.32
531 565 8.739039 TGTTTCACGAAGAATGATATTTCCAAT 58.261 29.630 0.00 0.00 35.83 3.16
532 566 8.105097 TGTTTCACGAAGAATGATATTTCCAA 57.895 30.769 0.00 0.00 35.83 3.53
533 567 7.680442 TGTTTCACGAAGAATGATATTTCCA 57.320 32.000 0.00 0.00 35.83 3.53
534 568 8.964420 TTTGTTTCACGAAGAATGATATTTCC 57.036 30.769 0.00 0.00 35.83 3.13
537 571 8.863049 GCATTTTGTTTCACGAAGAATGATATT 58.137 29.630 0.00 0.00 35.83 1.28
538 572 7.489113 GGCATTTTGTTTCACGAAGAATGATAT 59.511 33.333 0.00 0.00 35.83 1.63
539 573 6.806249 GGCATTTTGTTTCACGAAGAATGATA 59.194 34.615 0.00 0.00 35.83 2.15
540 574 5.634859 GGCATTTTGTTTCACGAAGAATGAT 59.365 36.000 0.00 0.00 35.83 2.45
541 575 4.981674 GGCATTTTGTTTCACGAAGAATGA 59.018 37.500 0.00 0.00 35.83 2.57
542 576 4.143556 CGGCATTTTGTTTCACGAAGAATG 60.144 41.667 0.00 0.00 35.83 2.67
543 577 3.980775 CGGCATTTTGTTTCACGAAGAAT 59.019 39.130 0.00 0.00 35.83 2.40
544 578 3.367607 CGGCATTTTGTTTCACGAAGAA 58.632 40.909 0.00 0.00 0.00 2.52
545 579 2.856720 GCGGCATTTTGTTTCACGAAGA 60.857 45.455 0.00 0.00 0.00 2.87
546 580 1.451651 GCGGCATTTTGTTTCACGAAG 59.548 47.619 0.00 0.00 0.00 3.79
547 581 1.066303 AGCGGCATTTTGTTTCACGAA 59.934 42.857 1.45 0.00 0.00 3.85
548 582 0.665835 AGCGGCATTTTGTTTCACGA 59.334 45.000 1.45 0.00 0.00 4.35
549 583 1.189884 CAAGCGGCATTTTGTTTCACG 59.810 47.619 1.45 0.00 0.00 4.35
550 584 2.468831 TCAAGCGGCATTTTGTTTCAC 58.531 42.857 1.45 0.00 0.00 3.18
551 585 2.879002 TCAAGCGGCATTTTGTTTCA 57.121 40.000 1.45 0.00 0.00 2.69
552 586 5.837586 TTATTCAAGCGGCATTTTGTTTC 57.162 34.783 1.45 0.00 0.00 2.78
553 587 6.610741 TTTTATTCAAGCGGCATTTTGTTT 57.389 29.167 1.45 0.00 0.00 2.83
554 588 6.610741 TTTTTATTCAAGCGGCATTTTGTT 57.389 29.167 1.45 0.00 0.00 2.83
555 589 6.799926 ATTTTTATTCAAGCGGCATTTTGT 57.200 29.167 1.45 0.00 0.00 2.83
556 590 6.901357 GCTATTTTTATTCAAGCGGCATTTTG 59.099 34.615 1.45 0.00 0.00 2.44
557 591 6.593382 TGCTATTTTTATTCAAGCGGCATTTT 59.407 30.769 1.45 0.00 35.95 1.82
558 592 6.105333 TGCTATTTTTATTCAAGCGGCATTT 58.895 32.000 1.45 0.00 35.95 2.32
559 593 5.659463 TGCTATTTTTATTCAAGCGGCATT 58.341 33.333 1.45 0.00 35.95 3.56
560 594 5.261209 TGCTATTTTTATTCAAGCGGCAT 57.739 34.783 1.45 0.00 35.95 4.40
561 595 4.710423 TGCTATTTTTATTCAAGCGGCA 57.290 36.364 1.45 0.00 35.95 5.69
562 596 4.084900 GCATGCTATTTTTATTCAAGCGGC 60.085 41.667 11.37 0.00 35.95 6.53
563 597 5.042593 TGCATGCTATTTTTATTCAAGCGG 58.957 37.500 20.33 0.00 35.95 5.52
564 598 6.639686 AGATGCATGCTATTTTTATTCAAGCG 59.360 34.615 20.33 0.00 35.95 4.68
565 599 7.941795 AGATGCATGCTATTTTTATTCAAGC 57.058 32.000 20.33 0.00 0.00 4.01
567 601 9.872721 TGAAAGATGCATGCTATTTTTATTCAA 57.127 25.926 20.33 0.00 0.00 2.69
577 611 8.188799 GCAACATATATGAAAGATGCATGCTAT 58.811 33.333 20.33 10.71 35.48 2.97
578 612 7.532571 GCAACATATATGAAAGATGCATGCTA 58.467 34.615 20.33 5.73 35.48 3.49
579 613 6.387465 GCAACATATATGAAAGATGCATGCT 58.613 36.000 20.33 4.11 35.48 3.79
580 614 5.285370 CGCAACATATATGAAAGATGCATGC 59.715 40.000 19.63 11.82 35.23 4.06
581 615 6.376177 ACGCAACATATATGAAAGATGCATG 58.624 36.000 19.63 10.78 33.00 4.06
582 616 6.205270 TGACGCAACATATATGAAAGATGCAT 59.795 34.615 19.63 0.00 33.00 3.96
583 617 5.526846 TGACGCAACATATATGAAAGATGCA 59.473 36.000 19.63 6.29 33.00 3.96
584 618 5.989249 TGACGCAACATATATGAAAGATGC 58.011 37.500 19.63 16.97 0.00 3.91
585 619 9.454585 AATTTGACGCAACATATATGAAAGATG 57.545 29.630 19.63 10.25 0.00 2.90
624 658 9.818796 GCATTCTAGTTTCAAAACAAAACAAAA 57.181 25.926 8.23 0.00 41.30 2.44
625 659 9.213799 AGCATTCTAGTTTCAAAACAAAACAAA 57.786 25.926 8.23 0.00 41.30 2.83
626 660 8.655092 CAGCATTCTAGTTTCAAAACAAAACAA 58.345 29.630 8.23 0.00 41.30 2.83
627 661 7.201513 GCAGCATTCTAGTTTCAAAACAAAACA 60.202 33.333 8.23 0.00 41.30 2.83
628 662 7.119360 GCAGCATTCTAGTTTCAAAACAAAAC 58.881 34.615 8.23 0.00 41.30 2.43
629 663 6.815641 TGCAGCATTCTAGTTTCAAAACAAAA 59.184 30.769 8.23 0.45 41.30 2.44
630 664 6.336566 TGCAGCATTCTAGTTTCAAAACAAA 58.663 32.000 8.23 0.76 41.30 2.83
631 665 5.900425 TGCAGCATTCTAGTTTCAAAACAA 58.100 33.333 8.23 0.00 41.30 2.83
632 666 5.512753 TGCAGCATTCTAGTTTCAAAACA 57.487 34.783 8.23 0.00 41.30 2.83
633 667 6.385033 AGATGCAGCATTCTAGTTTCAAAAC 58.615 36.000 9.90 0.00 39.17 2.43
634 668 6.579666 AGATGCAGCATTCTAGTTTCAAAA 57.420 33.333 9.90 0.00 0.00 2.44
635 669 6.207221 TCAAGATGCAGCATTCTAGTTTCAAA 59.793 34.615 9.90 0.00 0.00 2.69
636 670 5.706833 TCAAGATGCAGCATTCTAGTTTCAA 59.293 36.000 9.90 0.00 0.00 2.69
637 671 5.247862 TCAAGATGCAGCATTCTAGTTTCA 58.752 37.500 9.90 0.00 0.00 2.69
638 672 5.808042 TCAAGATGCAGCATTCTAGTTTC 57.192 39.130 9.90 0.00 0.00 2.78
639 673 7.501559 ACATATCAAGATGCAGCATTCTAGTTT 59.498 33.333 9.90 0.00 0.00 2.66
640 674 6.996879 ACATATCAAGATGCAGCATTCTAGTT 59.003 34.615 9.90 0.00 0.00 2.24
641 675 6.427242 CACATATCAAGATGCAGCATTCTAGT 59.573 38.462 9.90 0.00 0.00 2.57
642 676 6.620949 GCACATATCAAGATGCAGCATTCTAG 60.621 42.308 9.90 0.65 38.00 2.43
643 677 5.180680 GCACATATCAAGATGCAGCATTCTA 59.819 40.000 9.90 0.00 38.00 2.10
644 678 4.023107 GCACATATCAAGATGCAGCATTCT 60.023 41.667 9.90 5.47 38.00 2.40
645 679 4.227538 GCACATATCAAGATGCAGCATTC 58.772 43.478 9.90 3.07 38.00 2.67
646 680 3.634910 TGCACATATCAAGATGCAGCATT 59.365 39.130 9.90 0.00 42.92 3.56
647 681 3.219281 TGCACATATCAAGATGCAGCAT 58.781 40.909 7.91 7.91 42.92 3.79
648 682 2.645802 TGCACATATCAAGATGCAGCA 58.354 42.857 4.07 0.00 42.92 4.41
651 685 3.564053 TCCTGCACATATCAAGATGCA 57.436 42.857 0.00 0.00 45.45 3.96
652 686 3.004106 GGTTCCTGCACATATCAAGATGC 59.996 47.826 0.00 0.00 38.59 3.91
653 687 4.201657 TGGTTCCTGCACATATCAAGATG 58.798 43.478 0.00 0.00 0.00 2.90
654 688 4.458397 CTGGTTCCTGCACATATCAAGAT 58.542 43.478 0.00 0.00 0.00 2.40
655 689 3.370846 CCTGGTTCCTGCACATATCAAGA 60.371 47.826 0.00 0.00 0.00 3.02
656 690 2.947652 CCTGGTTCCTGCACATATCAAG 59.052 50.000 0.00 0.00 0.00 3.02
657 691 2.575735 TCCTGGTTCCTGCACATATCAA 59.424 45.455 0.00 0.00 0.00 2.57
658 692 2.195727 TCCTGGTTCCTGCACATATCA 58.804 47.619 0.00 0.00 0.00 2.15
659 693 3.281727 TTCCTGGTTCCTGCACATATC 57.718 47.619 0.00 0.00 0.00 1.63
660 694 3.356290 GTTTCCTGGTTCCTGCACATAT 58.644 45.455 0.00 0.00 0.00 1.78
661 695 2.554344 GGTTTCCTGGTTCCTGCACATA 60.554 50.000 0.00 0.00 0.00 2.29
662 696 1.620822 GTTTCCTGGTTCCTGCACAT 58.379 50.000 0.00 0.00 0.00 3.21
663 697 0.467290 GGTTTCCTGGTTCCTGCACA 60.467 55.000 0.00 0.00 0.00 4.57
664 698 0.178990 AGGTTTCCTGGTTCCTGCAC 60.179 55.000 0.00 0.00 29.57 4.57
665 699 0.555769 AAGGTTTCCTGGTTCCTGCA 59.444 50.000 7.55 0.00 32.13 4.41
666 700 1.613925 GAAAGGTTTCCTGGTTCCTGC 59.386 52.381 7.55 0.00 32.13 4.85
688 722 5.129320 GCTACAAAATCCCATCCCAAGAAAT 59.871 40.000 0.00 0.00 0.00 2.17
700 734 2.618709 CAAGGATCGGCTACAAAATCCC 59.381 50.000 0.00 0.00 38.78 3.85
701 735 3.541632 TCAAGGATCGGCTACAAAATCC 58.458 45.455 0.00 0.00 38.37 3.01
702 736 4.201920 GGTTCAAGGATCGGCTACAAAATC 60.202 45.833 0.00 0.00 0.00 2.17
703 737 3.694566 GGTTCAAGGATCGGCTACAAAAT 59.305 43.478 0.00 0.00 0.00 1.82
705 739 2.706890 GGTTCAAGGATCGGCTACAAA 58.293 47.619 0.00 0.00 0.00 2.83
706 740 1.404986 CGGTTCAAGGATCGGCTACAA 60.405 52.381 0.00 0.00 0.00 2.41
709 743 1.187974 TTCGGTTCAAGGATCGGCTA 58.812 50.000 0.00 0.00 0.00 3.93
711 745 0.727398 CTTTCGGTTCAAGGATCGGC 59.273 55.000 0.00 0.00 0.00 5.54
713 747 2.000447 GGACTTTCGGTTCAAGGATCG 59.000 52.381 0.00 0.00 0.00 3.69
714 748 2.357075 GGGACTTTCGGTTCAAGGATC 58.643 52.381 0.00 0.00 0.00 3.36
715 749 1.338769 CGGGACTTTCGGTTCAAGGAT 60.339 52.381 0.00 0.00 0.00 3.24
716 750 0.034337 CGGGACTTTCGGTTCAAGGA 59.966 55.000 0.00 0.00 0.00 3.36
717 751 0.953960 CCGGGACTTTCGGTTCAAGG 60.954 60.000 0.00 0.00 42.33 3.61
718 752 0.953960 CCCGGGACTTTCGGTTCAAG 60.954 60.000 18.48 0.00 45.51 3.02
719 753 1.071814 CCCGGGACTTTCGGTTCAA 59.928 57.895 18.48 0.00 45.51 2.69
720 754 2.745037 CCCGGGACTTTCGGTTCA 59.255 61.111 18.48 0.00 45.51 3.18
721 755 2.743126 AAGCCCGGGACTTTCGGTTC 62.743 60.000 29.31 1.00 45.51 3.62
722 756 2.743126 GAAGCCCGGGACTTTCGGTT 62.743 60.000 29.31 6.73 45.51 4.44
723 757 3.246880 AAGCCCGGGACTTTCGGT 61.247 61.111 29.31 2.16 45.51 4.69
724 758 2.436115 GAAGCCCGGGACTTTCGG 60.436 66.667 29.31 0.00 46.43 4.30
725 759 1.448013 GAGAAGCCCGGGACTTTCG 60.448 63.158 29.31 0.00 0.00 3.46
726 760 1.448013 CGAGAAGCCCGGGACTTTC 60.448 63.158 29.31 23.05 0.00 2.62
727 761 1.911766 TCGAGAAGCCCGGGACTTT 60.912 57.895 29.31 15.39 0.00 2.66
728 762 2.283676 TCGAGAAGCCCGGGACTT 60.284 61.111 29.31 26.35 0.00 3.01
781 835 3.596214 CGTTGCGGAGGCCTTTATATAT 58.404 45.455 6.77 0.00 38.85 0.86
782 836 2.868839 GCGTTGCGGAGGCCTTTATATA 60.869 50.000 6.77 0.00 38.85 0.86
783 837 1.878953 CGTTGCGGAGGCCTTTATAT 58.121 50.000 6.77 0.00 38.85 0.86
815 869 3.963129 AGAAGAGACAGAAGAGATCGGT 58.037 45.455 0.00 0.00 39.30 4.69
816 870 4.202010 GGAAGAAGAGACAGAAGAGATCGG 60.202 50.000 0.00 0.00 0.00 4.18
940 1031 6.148811 GGAAGTTAACAGAAAATCATCCGTGA 59.851 38.462 8.61 0.00 39.04 4.35
951 1042 4.134563 GAGTGGCAGGAAGTTAACAGAAA 58.865 43.478 8.61 0.00 0.00 2.52
952 1043 3.740115 GAGTGGCAGGAAGTTAACAGAA 58.260 45.455 8.61 0.00 0.00 3.02
953 1044 2.288825 CGAGTGGCAGGAAGTTAACAGA 60.289 50.000 8.61 0.00 0.00 3.41
955 1046 1.876416 GCGAGTGGCAGGAAGTTAACA 60.876 52.381 8.61 0.00 42.87 2.41
956 1047 0.796927 GCGAGTGGCAGGAAGTTAAC 59.203 55.000 0.00 0.00 42.87 2.01
957 1048 0.321298 GGCGAGTGGCAGGAAGTTAA 60.321 55.000 0.00 0.00 46.16 2.01
1228 1354 3.676291 TGTACTGCTAGTTGACATGCA 57.324 42.857 0.00 0.00 0.00 3.96
1242 1368 1.164411 TGGCGGCAGAAATTGTACTG 58.836 50.000 7.97 0.00 37.22 2.74
1265 1391 7.094118 TGGTACTAATTAATCTTTGTTGCACCC 60.094 37.037 0.00 0.00 0.00 4.61
1284 1410 1.354031 TCCGGTGTAGTGGTGGTACTA 59.646 52.381 0.00 0.00 32.19 1.82
1285 1411 0.112995 TCCGGTGTAGTGGTGGTACT 59.887 55.000 0.00 0.00 34.71 2.73
1286 1412 1.188863 ATCCGGTGTAGTGGTGGTAC 58.811 55.000 0.00 0.00 0.00 3.34
1287 1413 2.824689 TATCCGGTGTAGTGGTGGTA 57.175 50.000 0.00 0.00 0.00 3.25
1288 1414 1.829222 CTTATCCGGTGTAGTGGTGGT 59.171 52.381 0.00 0.00 0.00 4.16
1289 1415 2.104967 TCTTATCCGGTGTAGTGGTGG 58.895 52.381 0.00 0.00 0.00 4.61
1290 1416 3.383505 TCATCTTATCCGGTGTAGTGGTG 59.616 47.826 0.00 0.82 0.00 4.17
1291 1417 3.638860 TCATCTTATCCGGTGTAGTGGT 58.361 45.455 0.00 0.00 0.00 4.16
1292 1418 4.524714 AGATCATCTTATCCGGTGTAGTGG 59.475 45.833 0.00 0.00 0.00 4.00
1293 1419 5.713792 AGATCATCTTATCCGGTGTAGTG 57.286 43.478 0.00 0.00 0.00 2.74
1294 1420 5.509840 GCAAGATCATCTTATCCGGTGTAGT 60.510 44.000 0.00 0.00 33.78 2.73
1295 1421 4.926238 GCAAGATCATCTTATCCGGTGTAG 59.074 45.833 0.00 0.00 33.78 2.74
1314 1440 2.079158 AGTCGTCATTGACATGGCAAG 58.921 47.619 20.69 11.78 41.41 4.01
1407 1550 6.432607 ACAGAAAATGATAGCTGACATGTG 57.567 37.500 1.15 0.00 32.86 3.21
1410 1553 7.934855 AGAAACAGAAAATGATAGCTGACAT 57.065 32.000 0.00 0.00 32.86 3.06
1439 1592 6.427547 ACCATATTTTGTTGGCAACTTGATTG 59.572 34.615 28.71 18.27 41.69 2.67
1444 1598 5.163258 TGGAACCATATTTTGTTGGCAACTT 60.163 36.000 28.71 12.87 36.41 2.66
1450 1604 5.576384 CGAACATGGAACCATATTTTGTTGG 59.424 40.000 12.48 8.80 39.02 3.77
1454 1608 7.312154 TCTTTCGAACATGGAACCATATTTTG 58.688 34.615 6.00 7.03 34.91 2.44
1465 1619 3.561310 GCATATGCTCTTTCGAACATGGA 59.439 43.478 20.64 0.00 38.21 3.41
1472 1626 3.541996 TCAAGGCATATGCTCTTTCGA 57.458 42.857 26.12 17.22 41.70 3.71
1518 1672 9.645059 TGTACTAGATCAGAAGAAAGTTTGATG 57.355 33.333 0.00 0.00 30.85 3.07
1548 1702 9.561069 ACATTGTGAAAAGTCTATTACTCTGTT 57.439 29.630 0.00 0.00 37.50 3.16
1549 1703 9.561069 AACATTGTGAAAAGTCTATTACTCTGT 57.439 29.630 0.00 0.00 37.50 3.41
1650 1804 4.588899 TCCAGGTCGTTGATTTTGATGAT 58.411 39.130 0.00 0.00 0.00 2.45
1659 1813 2.218603 GTGTGTTTCCAGGTCGTTGAT 58.781 47.619 0.00 0.00 0.00 2.57
1661 1815 0.303493 CGTGTGTTTCCAGGTCGTTG 59.697 55.000 0.00 0.00 0.00 4.10
1671 1825 2.850321 CATATGGTGTGCGTGTGTTTC 58.150 47.619 0.00 0.00 0.00 2.78
1702 1856 1.281925 AAATGCCACTCCCTCCGGAT 61.282 55.000 3.57 0.00 37.60 4.18
1705 1859 0.609131 ACAAAATGCCACTCCCTCCG 60.609 55.000 0.00 0.00 0.00 4.63
1715 1869 9.759259 GATTAAAGAAATAGCAAACAAAATGCC 57.241 29.630 0.00 0.00 44.91 4.40
1728 1882 7.526608 TGTCGGCAACTTGATTAAAGAAATAG 58.473 34.615 0.00 0.00 39.38 1.73
1739 1893 6.482308 GGTACTATATTTGTCGGCAACTTGAT 59.518 38.462 0.00 0.00 33.82 2.57
1740 1894 5.813672 GGTACTATATTTGTCGGCAACTTGA 59.186 40.000 0.00 0.00 33.82 3.02
1741 1895 5.276678 CGGTACTATATTTGTCGGCAACTTG 60.277 44.000 0.00 0.00 33.82 3.16
1742 1896 4.807304 CGGTACTATATTTGTCGGCAACTT 59.193 41.667 0.00 0.00 33.82 2.66
1743 1897 4.142093 ACGGTACTATATTTGTCGGCAACT 60.142 41.667 0.00 0.00 33.82 3.16
1744 1898 4.026310 CACGGTACTATATTTGTCGGCAAC 60.026 45.833 0.00 0.00 33.82 4.17
1745 1899 4.114073 CACGGTACTATATTTGTCGGCAA 58.886 43.478 0.00 0.00 0.00 4.52
1746 1900 3.130869 ACACGGTACTATATTTGTCGGCA 59.869 43.478 0.00 0.00 0.00 5.69
1748 1902 4.438797 CGAACACGGTACTATATTTGTCGG 59.561 45.833 0.00 0.00 0.00 4.79
1749 1903 5.265477 TCGAACACGGTACTATATTTGTCG 58.735 41.667 0.00 0.00 0.00 4.35
1750 1904 7.485913 TCTTTCGAACACGGTACTATATTTGTC 59.514 37.037 0.00 0.00 0.00 3.18
1751 1905 7.315142 TCTTTCGAACACGGTACTATATTTGT 58.685 34.615 0.00 0.00 0.00 2.83
1752 1906 7.514747 GCTCTTTCGAACACGGTACTATATTTG 60.515 40.741 0.00 0.00 0.00 2.32
1758 2104 2.553602 TGCTCTTTCGAACACGGTACTA 59.446 45.455 0.00 0.00 0.00 1.82
1804 2150 4.268797 TGCATTTTGCCATTAAAGCTGA 57.731 36.364 0.00 0.00 44.23 4.26
1816 2162 6.183360 CCAGAATAAAGTTGGATGCATTTTGC 60.183 38.462 0.00 0.00 37.80 3.68
1853 2199 8.261492 AGCATCTTGAAAAGTGTATTACTCTG 57.739 34.615 0.00 0.00 46.34 3.35
1872 2218 3.717452 AAGCAGAAGAGGAAAGCATCT 57.283 42.857 0.00 0.00 36.59 2.90
1883 2229 6.183360 TGCTTAATTGTTTGGAAAGCAGAAGA 60.183 34.615 5.63 0.00 45.47 2.87
1895 2241 1.720852 GCTGGCGTGCTTAATTGTTTG 59.279 47.619 0.00 0.00 0.00 2.93
1899 2245 0.179156 CAGGCTGGCGTGCTTAATTG 60.179 55.000 6.61 0.00 0.00 2.32
1938 2284 3.119779 GGTTACTCGTGTCTCCTGAAGAG 60.120 52.174 0.00 0.00 44.75 2.85
1942 2288 2.281539 TGGTTACTCGTGTCTCCTGA 57.718 50.000 0.00 0.00 0.00 3.86
1944 2290 1.893801 CCTTGGTTACTCGTGTCTCCT 59.106 52.381 0.00 0.00 0.00 3.69
1945 2291 1.617357 ACCTTGGTTACTCGTGTCTCC 59.383 52.381 0.00 0.00 0.00 3.71
1946 2292 3.382048 AACCTTGGTTACTCGTGTCTC 57.618 47.619 2.82 0.00 0.00 3.36
1960 2311 1.169661 TACAGCCGTGCCAAACCTTG 61.170 55.000 0.00 0.00 0.00 3.61
2056 2453 2.288518 ACTTTCTGTCTGCTCCTTCGAC 60.289 50.000 0.00 0.00 0.00 4.20
2146 2543 1.002773 GAACAAAAGGCTCCCGAGGTA 59.997 52.381 0.00 0.00 0.00 3.08
2154 2551 0.881118 TGATGCGGAACAAAAGGCTC 59.119 50.000 0.00 0.00 0.00 4.70
2158 2555 2.350772 GGTGACTGATGCGGAACAAAAG 60.351 50.000 0.00 0.00 0.00 2.27
2162 2559 0.107643 TTGGTGACTGATGCGGAACA 59.892 50.000 0.00 0.00 0.00 3.18
2181 2578 4.445452 CATTTCAATGGCTACTTGCAGT 57.555 40.909 0.00 0.00 45.15 4.40
2221 2618 2.426024 GCTCATGGCTGTTTGATGTGAT 59.574 45.455 0.00 0.00 38.06 3.06
2363 2761 3.830178 TGACTTCTATGGTTTGTCCTCGA 59.170 43.478 0.00 0.00 37.07 4.04
2365 2763 6.231211 TCTTTGACTTCTATGGTTTGTCCTC 58.769 40.000 0.00 0.00 37.07 3.71
2423 2833 2.096980 TCTCAGTACCTGCAATCGTACG 59.903 50.000 9.53 9.53 39.85 3.67
2425 2835 4.219944 ACTTTCTCAGTACCTGCAATCGTA 59.780 41.667 0.00 0.00 31.97 3.43
2474 2884 9.962783 ATTGCGTTATCTACTAACCTTTAGTAG 57.037 33.333 20.28 20.28 45.05 2.57
2495 2905 4.148696 GTGAATTTCTCAAACACCATTGCG 59.851 41.667 0.00 0.00 35.22 4.85
2565 2994 5.193663 TGCTTTTTGCTGCAGTTAACATA 57.806 34.783 16.64 0.00 43.37 2.29
2715 3145 6.341316 CGGAACCCATCATTCCTACATATAG 58.659 44.000 2.51 0.00 43.07 1.31
2821 3297 4.832266 TGGTTGGCTTTTATCAGTTGATGT 59.168 37.500 4.90 0.00 36.05 3.06
2824 3300 5.136828 TCTTGGTTGGCTTTTATCAGTTGA 58.863 37.500 0.00 0.00 0.00 3.18
2852 3328 7.373441 CGTGATCACTCAAAAGTTAGTTGAAAC 59.627 37.037 22.95 0.00 34.68 2.78
2893 3369 0.320771 CTGTGAAGGGAGAACACCGG 60.321 60.000 0.00 0.00 34.18 5.28
2952 3430 2.160417 GTGGACCTGAAAAATCTCAGCG 59.840 50.000 0.00 0.00 41.36 5.18
3093 3571 9.844790 CTACATCATGCACAAGAGAAATAAAAA 57.155 29.630 0.00 0.00 0.00 1.94
3098 3576 7.310664 CAAACTACATCATGCACAAGAGAAAT 58.689 34.615 0.00 0.00 0.00 2.17
3099 3577 6.671190 CAAACTACATCATGCACAAGAGAAA 58.329 36.000 0.00 0.00 0.00 2.52
3106 3584 2.512705 TGGCAAACTACATCATGCACA 58.487 42.857 0.00 0.00 40.51 4.57
3107 3585 3.699067 GATGGCAAACTACATCATGCAC 58.301 45.455 0.00 0.00 42.28 4.57
3188 3675 8.099364 TCAGAAAGCTTGATTAAAGGTAGTTG 57.901 34.615 0.00 0.00 45.87 3.16
3374 3862 5.431309 CAAATTTCACGCCAAAAACTTAGC 58.569 37.500 0.00 0.00 0.00 3.09
3434 3922 1.412074 AGGGCATCCAATGGAACATCC 60.412 52.381 5.89 6.16 38.43 3.51
3533 4022 8.737168 ATAAATAAGAGCATCAGTAGCAAACA 57.263 30.769 0.00 0.00 37.82 2.83
3680 4171 4.087182 ACATACTCTCAAGGGAAACTCGA 58.913 43.478 0.00 0.00 0.00 4.04
3734 4233 8.920665 CAGAGTACTAGAATGAAACAAGAACTG 58.079 37.037 0.00 0.00 0.00 3.16
3736 4235 8.819643 ACAGAGTACTAGAATGAAACAAGAAC 57.180 34.615 0.00 0.00 0.00 3.01
3800 4310 2.774439 AAACTGAACGCGAGCAAAAT 57.226 40.000 15.93 0.00 0.00 1.82
3943 4462 8.360390 GGTTCAAAAGATCATCTTAACCAAGTT 58.640 33.333 19.61 0.27 40.11 2.66
4063 4582 5.617252 TCTTTCTTTGTAACCACCGAGATT 58.383 37.500 0.00 0.00 0.00 2.40
4726 5278 1.673665 CCAGAGTCCCAACAGCAGC 60.674 63.158 0.00 0.00 0.00 5.25
4846 5399 4.159879 CCTGAGGTAAGAAGGAACATACGT 59.840 45.833 0.00 0.00 32.43 3.57
4876 5429 3.251972 CAGAGTTTCTGCCAGTTCTTTCC 59.748 47.826 0.00 0.00 37.72 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.