Multiple sequence alignment - TraesCS2A01G519000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G519000 | chr2A | 100.000 | 3925 | 0 | 0 | 1 | 3925 | 742307389 | 742303465 | 0.000000e+00 | 7249.0 |
1 | TraesCS2A01G519000 | chr2A | 87.903 | 744 | 64 | 8 | 863 | 1599 | 744635730 | 744635006 | 0.000000e+00 | 852.0 |
2 | TraesCS2A01G519000 | chr2A | 86.873 | 678 | 72 | 10 | 1 | 668 | 744634098 | 744633428 | 0.000000e+00 | 743.0 |
3 | TraesCS2A01G519000 | chr2A | 80.301 | 863 | 87 | 41 | 777 | 1599 | 744616458 | 744615639 | 3.400000e-160 | 575.0 |
4 | TraesCS2A01G519000 | chr2A | 86.702 | 188 | 24 | 1 | 3527 | 3714 | 534621344 | 534621158 | 1.430000e-49 | 207.0 |
5 | TraesCS2A01G519000 | chr2D | 91.502 | 1871 | 93 | 32 | 1 | 1843 | 609638228 | 609640060 | 0.000000e+00 | 2514.0 |
6 | TraesCS2A01G519000 | chr2D | 92.436 | 899 | 50 | 13 | 2644 | 3529 | 609518188 | 609517295 | 0.000000e+00 | 1267.0 |
7 | TraesCS2A01G519000 | chr2D | 89.093 | 706 | 61 | 7 | 902 | 1599 | 612697209 | 612696512 | 0.000000e+00 | 863.0 |
8 | TraesCS2A01G519000 | chr2D | 90.440 | 659 | 49 | 3 | 939 | 1597 | 612760006 | 612759362 | 0.000000e+00 | 856.0 |
9 | TraesCS2A01G519000 | chr2D | 87.658 | 713 | 49 | 8 | 863 | 1574 | 612982930 | 612982256 | 0.000000e+00 | 793.0 |
10 | TraesCS2A01G519000 | chr2D | 85.903 | 681 | 79 | 12 | 1 | 668 | 612977686 | 612977010 | 0.000000e+00 | 710.0 |
11 | TraesCS2A01G519000 | chr2D | 84.810 | 711 | 82 | 14 | 902 | 1599 | 612935564 | 612934867 | 0.000000e+00 | 691.0 |
12 | TraesCS2A01G519000 | chr2D | 84.107 | 711 | 76 | 20 | 902 | 1599 | 612455495 | 612454809 | 0.000000e+00 | 652.0 |
13 | TraesCS2A01G519000 | chr2D | 94.132 | 409 | 20 | 4 | 2249 | 2656 | 609518614 | 609518209 | 1.550000e-173 | 619.0 |
14 | TraesCS2A01G519000 | chr2D | 85.379 | 554 | 59 | 14 | 1 | 550 | 612695878 | 612695343 | 4.430000e-154 | 555.0 |
15 | TraesCS2A01G519000 | chr2D | 86.824 | 425 | 45 | 4 | 255 | 668 | 612754211 | 612753787 | 7.680000e-127 | 464.0 |
16 | TraesCS2A01G519000 | chr2D | 91.698 | 265 | 21 | 1 | 1833 | 2097 | 609549362 | 609549099 | 2.230000e-97 | 366.0 |
17 | TraesCS2A01G519000 | chr2D | 88.889 | 99 | 10 | 1 | 507 | 604 | 612695235 | 612695333 | 1.920000e-23 | 121.0 |
18 | TraesCS2A01G519000 | chr2D | 86.486 | 74 | 8 | 2 | 596 | 668 | 612695244 | 612695172 | 3.250000e-11 | 80.5 |
19 | TraesCS2A01G519000 | chr2D | 95.745 | 47 | 2 | 0 | 2092 | 2138 | 609518751 | 609518705 | 4.210000e-10 | 76.8 |
20 | TraesCS2A01G519000 | chr2D | 87.719 | 57 | 7 | 0 | 680 | 736 | 24428444 | 24428388 | 2.530000e-07 | 67.6 |
21 | TraesCS2A01G519000 | chr2D | 92.857 | 42 | 2 | 1 | 3087 | 3128 | 609517186 | 609517226 | 4.240000e-05 | 60.2 |
22 | TraesCS2A01G519000 | chr3A | 96.160 | 651 | 23 | 2 | 2156 | 2806 | 90119926 | 90119278 | 0.000000e+00 | 1062.0 |
23 | TraesCS2A01G519000 | chr3A | 93.380 | 574 | 22 | 5 | 1582 | 2154 | 90120569 | 90120011 | 0.000000e+00 | 835.0 |
24 | TraesCS2A01G519000 | chr3A | 87.166 | 187 | 23 | 1 | 3528 | 3714 | 72893173 | 72893358 | 1.100000e-50 | 211.0 |
25 | TraesCS2A01G519000 | chr3A | 83.146 | 89 | 8 | 6 | 3087 | 3171 | 207837944 | 207838029 | 1.510000e-09 | 75.0 |
26 | TraesCS2A01G519000 | chr2B | 85.000 | 860 | 88 | 21 | 754 | 1586 | 747786676 | 747785831 | 0.000000e+00 | 835.0 |
27 | TraesCS2A01G519000 | chr2B | 85.492 | 772 | 77 | 15 | 868 | 1635 | 747821632 | 747820892 | 0.000000e+00 | 773.0 |
28 | TraesCS2A01G519000 | chr2B | 91.103 | 562 | 35 | 8 | 902 | 1461 | 747855334 | 747854786 | 0.000000e+00 | 747.0 |
29 | TraesCS2A01G519000 | chr2B | 86.854 | 677 | 72 | 10 | 1 | 668 | 747781665 | 747780997 | 0.000000e+00 | 741.0 |
30 | TraesCS2A01G519000 | chr2B | 85.614 | 570 | 53 | 11 | 1 | 555 | 747853282 | 747852727 | 4.400000e-159 | 571.0 |
31 | TraesCS2A01G519000 | chr2B | 83.280 | 622 | 63 | 18 | 1 | 606 | 747787427 | 747786831 | 5.770000e-148 | 534.0 |
32 | TraesCS2A01G519000 | chr2B | 86.067 | 445 | 55 | 7 | 2805 | 3244 | 744060326 | 744059884 | 4.590000e-129 | 472.0 |
33 | TraesCS2A01G519000 | chr2B | 88.742 | 151 | 15 | 2 | 1450 | 1599 | 747854766 | 747854617 | 2.410000e-42 | 183.0 |
34 | TraesCS2A01G519000 | chr2B | 86.777 | 121 | 16 | 0 | 548 | 668 | 747836070 | 747835950 | 6.840000e-28 | 135.0 |
35 | TraesCS2A01G519000 | chr2B | 84.848 | 66 | 10 | 0 | 679 | 744 | 257534836 | 257534771 | 2.530000e-07 | 67.6 |
36 | TraesCS2A01G519000 | chr1D | 89.785 | 372 | 31 | 3 | 2249 | 2614 | 400306172 | 400306542 | 1.650000e-128 | 470.0 |
37 | TraesCS2A01G519000 | chr1D | 90.678 | 354 | 29 | 3 | 1592 | 1945 | 400305492 | 400305841 | 5.940000e-128 | 468.0 |
38 | TraesCS2A01G519000 | chr1D | 92.045 | 88 | 5 | 2 | 2720 | 2806 | 400306858 | 400306944 | 5.330000e-24 | 122.0 |
39 | TraesCS2A01G519000 | chr6D | 86.979 | 192 | 22 | 3 | 3525 | 3714 | 439414654 | 439414464 | 3.070000e-51 | 213.0 |
40 | TraesCS2A01G519000 | chr6D | 85.484 | 186 | 27 | 0 | 3529 | 3714 | 216845863 | 216846048 | 1.110000e-45 | 195.0 |
41 | TraesCS2A01G519000 | chr5D | 87.097 | 186 | 22 | 2 | 3530 | 3714 | 230419114 | 230419298 | 3.970000e-50 | 209.0 |
42 | TraesCS2A01G519000 | chr5D | 84.848 | 66 | 10 | 0 | 679 | 744 | 332584369 | 332584304 | 2.530000e-07 | 67.6 |
43 | TraesCS2A01G519000 | chr7A | 87.363 | 182 | 21 | 2 | 3527 | 3707 | 200598131 | 200598311 | 1.430000e-49 | 207.0 |
44 | TraesCS2A01G519000 | chr7A | 85.246 | 183 | 27 | 0 | 3526 | 3708 | 1295946 | 1296128 | 5.180000e-44 | 189.0 |
45 | TraesCS2A01G519000 | chr7A | 84.848 | 66 | 10 | 0 | 679 | 744 | 494506061 | 494505996 | 2.530000e-07 | 67.6 |
46 | TraesCS2A01G519000 | chr1B | 87.027 | 185 | 23 | 1 | 3530 | 3714 | 342123468 | 342123651 | 1.430000e-49 | 207.0 |
47 | TraesCS2A01G519000 | chr7B | 85.246 | 183 | 27 | 0 | 3526 | 3708 | 532154625 | 532154807 | 5.180000e-44 | 189.0 |
48 | TraesCS2A01G519000 | chr6B | 87.879 | 66 | 8 | 0 | 679 | 744 | 96671820 | 96671755 | 1.170000e-10 | 78.7 |
49 | TraesCS2A01G519000 | chr3D | 83.146 | 89 | 9 | 6 | 3087 | 3171 | 170229067 | 170229153 | 4.210000e-10 | 76.8 |
50 | TraesCS2A01G519000 | chr3D | 88.136 | 59 | 7 | 0 | 679 | 737 | 103823843 | 103823901 | 1.960000e-08 | 71.3 |
51 | TraesCS2A01G519000 | chr4D | 87.931 | 58 | 7 | 0 | 680 | 737 | 496282433 | 496282376 | 7.040000e-08 | 69.4 |
52 | TraesCS2A01G519000 | chrUn | 80.488 | 82 | 10 | 6 | 679 | 755 | 240118531 | 240118451 | 1.520000e-04 | 58.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G519000 | chr2A | 742303465 | 742307389 | 3924 | True | 7249.000000 | 7249 | 100.000000 | 1 | 3925 | 1 | chr2A.!!$R2 | 3924 |
1 | TraesCS2A01G519000 | chr2A | 744633428 | 744635730 | 2302 | True | 797.500000 | 852 | 87.388000 | 1 | 1599 | 2 | chr2A.!!$R4 | 1598 |
2 | TraesCS2A01G519000 | chr2A | 744615639 | 744616458 | 819 | True | 575.000000 | 575 | 80.301000 | 777 | 1599 | 1 | chr2A.!!$R3 | 822 |
3 | TraesCS2A01G519000 | chr2D | 609638228 | 609640060 | 1832 | False | 2514.000000 | 2514 | 91.502000 | 1 | 1843 | 1 | chr2D.!!$F2 | 1842 |
4 | TraesCS2A01G519000 | chr2D | 612759362 | 612760006 | 644 | True | 856.000000 | 856 | 90.440000 | 939 | 1597 | 1 | chr2D.!!$R5 | 658 |
5 | TraesCS2A01G519000 | chr2D | 612982256 | 612982930 | 674 | True | 793.000000 | 793 | 87.658000 | 863 | 1574 | 1 | chr2D.!!$R8 | 711 |
6 | TraesCS2A01G519000 | chr2D | 612977010 | 612977686 | 676 | True | 710.000000 | 710 | 85.903000 | 1 | 668 | 1 | chr2D.!!$R7 | 667 |
7 | TraesCS2A01G519000 | chr2D | 612934867 | 612935564 | 697 | True | 691.000000 | 691 | 84.810000 | 902 | 1599 | 1 | chr2D.!!$R6 | 697 |
8 | TraesCS2A01G519000 | chr2D | 609517295 | 609518751 | 1456 | True | 654.266667 | 1267 | 94.104333 | 2092 | 3529 | 3 | chr2D.!!$R9 | 1437 |
9 | TraesCS2A01G519000 | chr2D | 612454809 | 612455495 | 686 | True | 652.000000 | 652 | 84.107000 | 902 | 1599 | 1 | chr2D.!!$R3 | 697 |
10 | TraesCS2A01G519000 | chr2D | 612695172 | 612697209 | 2037 | True | 499.500000 | 863 | 86.986000 | 1 | 1599 | 3 | chr2D.!!$R10 | 1598 |
11 | TraesCS2A01G519000 | chr3A | 90119278 | 90120569 | 1291 | True | 948.500000 | 1062 | 94.770000 | 1582 | 2806 | 2 | chr3A.!!$R1 | 1224 |
12 | TraesCS2A01G519000 | chr2B | 747820892 | 747821632 | 740 | True | 773.000000 | 773 | 85.492000 | 868 | 1635 | 1 | chr2B.!!$R4 | 767 |
13 | TraesCS2A01G519000 | chr2B | 747780997 | 747781665 | 668 | True | 741.000000 | 741 | 86.854000 | 1 | 668 | 1 | chr2B.!!$R3 | 667 |
14 | TraesCS2A01G519000 | chr2B | 747785831 | 747787427 | 1596 | True | 684.500000 | 835 | 84.140000 | 1 | 1586 | 2 | chr2B.!!$R6 | 1585 |
15 | TraesCS2A01G519000 | chr2B | 747852727 | 747855334 | 2607 | True | 500.333333 | 747 | 88.486333 | 1 | 1599 | 3 | chr2B.!!$R7 | 1598 |
16 | TraesCS2A01G519000 | chr1D | 400305492 | 400306944 | 1452 | False | 353.333333 | 470 | 90.836000 | 1592 | 2806 | 3 | chr1D.!!$F1 | 1214 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
123 | 125 | 0.034186 | TTGCGCCTCCATCCAAGAAT | 60.034 | 50.0 | 4.18 | 0.0 | 0.00 | 2.40 | F |
783 | 904 | 0.648958 | GTATGAAAGCGTACACCGGC | 59.351 | 55.0 | 0.00 | 0.0 | 36.67 | 6.13 | F |
858 | 985 | 1.027357 | ATAGTAGCCACGTACACCGG | 58.973 | 55.0 | 0.00 | 0.0 | 42.24 | 5.28 | F |
2063 | 2653 | 0.336737 | ATTTATGGTTTGGCCCCCGA | 59.663 | 50.0 | 0.00 | 0.0 | 36.04 | 5.14 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1351 | 1521 | 1.226211 | GCATGCATGACACGCTCAC | 60.226 | 57.895 | 30.64 | 5.13 | 33.76 | 3.51 | R |
1600 | 1837 | 1.226831 | CAACGCACGGGCTTTTTGT | 60.227 | 52.632 | 8.62 | 0.00 | 38.10 | 2.83 | R |
2851 | 4101 | 0.460311 | ATCGTCCGAGCCTAACAAGG | 59.540 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 | R |
3648 | 4925 | 0.024491 | CGCTGGCGTATACAAACACG | 59.976 | 55.000 | 6.83 | 0.00 | 41.04 | 4.49 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
37 | 39 | 2.124983 | CTGACGGGCCATGTGAGG | 60.125 | 66.667 | 4.39 | 0.00 | 0.00 | 3.86 |
38 | 40 | 2.927856 | TGACGGGCCATGTGAGGT | 60.928 | 61.111 | 4.39 | 0.00 | 0.00 | 3.85 |
39 | 41 | 1.610967 | TGACGGGCCATGTGAGGTA | 60.611 | 57.895 | 4.39 | 0.00 | 0.00 | 3.08 |
40 | 42 | 1.144057 | GACGGGCCATGTGAGGTAG | 59.856 | 63.158 | 4.39 | 0.00 | 0.00 | 3.18 |
41 | 43 | 1.305802 | ACGGGCCATGTGAGGTAGA | 60.306 | 57.895 | 4.39 | 0.00 | 0.00 | 2.59 |
42 | 44 | 0.907704 | ACGGGCCATGTGAGGTAGAA | 60.908 | 55.000 | 4.39 | 0.00 | 0.00 | 2.10 |
43 | 45 | 0.462047 | CGGGCCATGTGAGGTAGAAC | 60.462 | 60.000 | 4.39 | 0.00 | 0.00 | 3.01 |
44 | 46 | 0.107165 | GGGCCATGTGAGGTAGAACC | 60.107 | 60.000 | 4.39 | 0.00 | 38.99 | 3.62 |
118 | 120 | 1.925285 | ATCCTTTGCGCCTCCATCCA | 61.925 | 55.000 | 4.18 | 0.00 | 0.00 | 3.41 |
123 | 125 | 0.034186 | TTGCGCCTCCATCCAAGAAT | 60.034 | 50.000 | 4.18 | 0.00 | 0.00 | 2.40 |
140 | 142 | 9.880157 | ATCCAAGAATCTTCATAAAACAAATGG | 57.120 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
179 | 185 | 9.467258 | CCATGCCACTTTATTAAATAACTGATG | 57.533 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
264 | 273 | 5.618056 | TGCTTAAGCTTCAGTGATTCTTG | 57.382 | 39.130 | 26.90 | 3.94 | 42.66 | 3.02 |
386 | 395 | 1.268265 | TCTTGTGAATCGTCGCATCG | 58.732 | 50.000 | 0.00 | 0.00 | 43.64 | 3.84 |
484 | 502 | 8.495949 | ACTTCTTATATTTGTGTCGACAACAAG | 58.504 | 33.333 | 21.95 | 9.34 | 41.92 | 3.16 |
590 | 609 | 3.699538 | TGCCTAACTCACTATGATCGTGT | 59.300 | 43.478 | 0.00 | 0.00 | 34.14 | 4.49 |
594 | 613 | 6.507900 | CCTAACTCACTATGATCGTGTGATT | 58.492 | 40.000 | 15.82 | 10.53 | 39.55 | 2.57 |
598 | 617 | 6.212235 | ACTCACTATGATCGTGTGATTCATC | 58.788 | 40.000 | 15.82 | 0.00 | 39.55 | 2.92 |
674 | 784 | 7.231722 | CAGTAGCTAATGTGTAATACTCCCTCT | 59.768 | 40.741 | 12.98 | 0.00 | 0.00 | 3.69 |
675 | 785 | 6.658188 | AGCTAATGTGTAATACTCCCTCTC | 57.342 | 41.667 | 0.00 | 0.00 | 0.00 | 3.20 |
676 | 786 | 6.136857 | AGCTAATGTGTAATACTCCCTCTCA | 58.863 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
677 | 787 | 6.611642 | AGCTAATGTGTAATACTCCCTCTCAA | 59.388 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
693 | 814 | 5.659079 | CCCTCTCAAGTCTCAACCTTAGTAT | 59.341 | 44.000 | 0.00 | 0.00 | 0.00 | 2.12 |
700 | 821 | 9.706691 | TCAAGTCTCAACCTTAGTATAACTTTG | 57.293 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
775 | 896 | 3.743911 | TGATTTGTCACGTATGAAAGCGT | 59.256 | 39.130 | 0.00 | 0.00 | 42.45 | 5.07 |
777 | 898 | 4.634349 | TTTGTCACGTATGAAAGCGTAC | 57.366 | 40.909 | 0.00 | 0.00 | 39.48 | 3.67 |
778 | 899 | 3.285816 | TGTCACGTATGAAAGCGTACA | 57.714 | 42.857 | 0.00 | 0.00 | 39.48 | 2.90 |
779 | 900 | 2.981805 | TGTCACGTATGAAAGCGTACAC | 59.018 | 45.455 | 0.00 | 0.00 | 39.48 | 2.90 |
780 | 901 | 2.343544 | GTCACGTATGAAAGCGTACACC | 59.656 | 50.000 | 0.00 | 0.00 | 39.48 | 4.16 |
781 | 902 | 1.319374 | CACGTATGAAAGCGTACACCG | 59.681 | 52.381 | 0.00 | 0.00 | 39.48 | 4.94 |
782 | 903 | 0.918619 | CGTATGAAAGCGTACACCGG | 59.081 | 55.000 | 0.00 | 0.00 | 36.50 | 5.28 |
783 | 904 | 0.648958 | GTATGAAAGCGTACACCGGC | 59.351 | 55.000 | 0.00 | 0.00 | 36.67 | 6.13 |
809 | 930 | 6.379133 | ACACGAGGAGTAATATGTCAGGTTAA | 59.621 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
852 | 979 | 5.526115 | GTGATTAAGCATAGTAGCCACGTA | 58.474 | 41.667 | 0.00 | 0.00 | 34.23 | 3.57 |
854 | 981 | 4.987408 | TTAAGCATAGTAGCCACGTACA | 57.013 | 40.909 | 0.00 | 0.00 | 34.23 | 2.90 |
855 | 982 | 2.865343 | AGCATAGTAGCCACGTACAC | 57.135 | 50.000 | 0.00 | 0.00 | 34.23 | 2.90 |
856 | 983 | 1.407979 | AGCATAGTAGCCACGTACACC | 59.592 | 52.381 | 0.00 | 0.00 | 34.23 | 4.16 |
857 | 984 | 1.862815 | GCATAGTAGCCACGTACACCG | 60.863 | 57.143 | 0.00 | 0.00 | 44.03 | 4.94 |
858 | 985 | 1.027357 | ATAGTAGCCACGTACACCGG | 58.973 | 55.000 | 0.00 | 0.00 | 42.24 | 5.28 |
859 | 986 | 1.031571 | TAGTAGCCACGTACACCGGG | 61.032 | 60.000 | 6.32 | 0.00 | 42.24 | 5.73 |
1032 | 1186 | 3.764466 | CTCCCGAGGCTCGTTGCT | 61.764 | 66.667 | 32.41 | 0.00 | 42.39 | 3.91 |
1348 | 1518 | 3.191371 | CAGGGAAAAGGCATGTTAGTGAC | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
1349 | 1519 | 3.074538 | AGGGAAAAGGCATGTTAGTGACT | 59.925 | 43.478 | 0.00 | 0.00 | 39.79 | 3.41 |
1350 | 1520 | 4.288626 | AGGGAAAAGGCATGTTAGTGACTA | 59.711 | 41.667 | 0.00 | 0.00 | 36.11 | 2.59 |
1351 | 1521 | 4.636206 | GGGAAAAGGCATGTTAGTGACTAG | 59.364 | 45.833 | 0.00 | 0.00 | 36.11 | 2.57 |
1352 | 1522 | 5.246307 | GGAAAAGGCATGTTAGTGACTAGT | 58.754 | 41.667 | 0.00 | 0.00 | 36.11 | 2.57 |
1435 | 1625 | 1.374252 | AAGCGGTCGATGTCCACAC | 60.374 | 57.895 | 0.00 | 0.00 | 0.00 | 3.82 |
1478 | 1703 | 3.872696 | TCTTGTGTGTGTCATGTGAGTT | 58.127 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
1792 | 2158 | 4.035558 | GCGATGCACAAAAATCCTCTATCA | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
1893 | 2259 | 6.040955 | TGAGTGTGACACAAAGATCTTCTACT | 59.959 | 38.462 | 18.95 | 5.21 | 36.74 | 2.57 |
2014 | 2579 | 1.965935 | CGGGGTCATGCACAATGATA | 58.034 | 50.000 | 0.00 | 0.00 | 46.90 | 2.15 |
2063 | 2653 | 0.336737 | ATTTATGGTTTGGCCCCCGA | 59.663 | 50.000 | 0.00 | 0.00 | 36.04 | 5.14 |
2154 | 2746 | 0.680921 | TGGACATTAGCAAGGCCAGC | 60.681 | 55.000 | 5.01 | 9.16 | 0.00 | 4.85 |
2232 | 3098 | 2.223782 | TGTTTCAACAAGACTGCATGGC | 60.224 | 45.455 | 0.00 | 0.00 | 35.67 | 4.40 |
2383 | 3372 | 2.629617 | CTGTTTGTTTCCAATGGAGGCT | 59.370 | 45.455 | 0.86 | 0.00 | 31.21 | 4.58 |
2452 | 3442 | 6.313658 | GTGCATATTTATCATAGCGATGTGGA | 59.686 | 38.462 | 6.70 | 0.00 | 35.39 | 4.02 |
2460 | 3450 | 9.990360 | TTTATCATAGCGATGTGGAACTATTTA | 57.010 | 29.630 | 6.70 | 0.00 | 38.04 | 1.40 |
2642 | 3670 | 5.065218 | CGCAGCTATTGAACTAAACCTCATT | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2795 | 4036 | 4.935885 | AGAGAAACGCATCTTGCTTTAG | 57.064 | 40.909 | 0.00 | 0.00 | 42.25 | 1.85 |
2890 | 4140 | 0.889994 | TTGATTGCCCATGAGCACAC | 59.110 | 50.000 | 0.00 | 0.00 | 43.97 | 3.82 |
3035 | 4285 | 6.892658 | ACATTTTATTCAGTGGCACAACTA | 57.107 | 33.333 | 21.41 | 3.33 | 44.16 | 2.24 |
3036 | 4286 | 6.677913 | ACATTTTATTCAGTGGCACAACTAC | 58.322 | 36.000 | 21.41 | 0.00 | 44.16 | 2.73 |
3094 | 4344 | 7.505646 | TGCGCAAACAAATAATTACATTTCAC | 58.494 | 30.769 | 8.16 | 0.00 | 0.00 | 3.18 |
3248 | 4522 | 7.116090 | TGTCCTGAACATTGATTAAAAATTGCG | 59.884 | 33.333 | 0.00 | 0.00 | 31.20 | 4.85 |
3249 | 4523 | 6.090628 | TCCTGAACATTGATTAAAAATTGCGC | 59.909 | 34.615 | 0.00 | 0.00 | 0.00 | 6.09 |
3250 | 4524 | 6.128607 | CCTGAACATTGATTAAAAATTGCGCA | 60.129 | 34.615 | 5.66 | 5.66 | 0.00 | 6.09 |
3253 | 4527 | 8.288208 | TGAACATTGATTAAAAATTGCGCAAAT | 58.712 | 25.926 | 28.81 | 17.33 | 0.00 | 2.32 |
3272 | 4547 | 7.266756 | GCGCAAATAAATATTTACATTGCATGC | 59.733 | 33.333 | 33.10 | 28.76 | 42.67 | 4.06 |
3309 | 4584 | 9.458374 | AACATATCTTAACTGGTTTTTGAAACG | 57.542 | 29.630 | 0.00 | 0.00 | 0.00 | 3.60 |
3316 | 4591 | 3.175929 | CTGGTTTTTGAAACGTGTGGAC | 58.824 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
3321 | 4596 | 5.120986 | GGTTTTTGAAACGTGTGGACATTTT | 59.879 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3409 | 4684 | 5.040635 | GTCCGTGAAAACATTGTGAACAAT | 58.959 | 37.500 | 2.80 | 2.80 | 46.62 | 2.71 |
3511 | 4788 | 4.494410 | GTGCGTGAAAACAAAGTGTAAGAC | 59.506 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
3514 | 4791 | 5.227184 | GCGTGAAAACAAAGTGTAAGACAAG | 59.773 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3547 | 4824 | 6.391227 | AAAAAGAGTCAATTACACTGGTGG | 57.609 | 37.500 | 5.70 | 0.00 | 34.19 | 4.61 |
3548 | 4825 | 4.706842 | AAGAGTCAATTACACTGGTGGT | 57.293 | 40.909 | 5.70 | 0.00 | 34.19 | 4.16 |
3558 | 4835 | 2.550830 | CACTGGTGGTGCTAGAACTT | 57.449 | 50.000 | 0.00 | 0.00 | 39.22 | 2.66 |
3559 | 4836 | 2.146342 | CACTGGTGGTGCTAGAACTTG | 58.854 | 52.381 | 0.00 | 0.00 | 39.22 | 3.16 |
3560 | 4837 | 1.072331 | ACTGGTGGTGCTAGAACTTGG | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
3561 | 4838 | 0.250727 | TGGTGGTGCTAGAACTTGGC | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
3562 | 4839 | 1.298859 | GGTGGTGCTAGAACTTGGCG | 61.299 | 60.000 | 0.00 | 0.00 | 0.00 | 5.69 |
3563 | 4840 | 0.602905 | GTGGTGCTAGAACTTGGCGT | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
3564 | 4841 | 0.970640 | TGGTGCTAGAACTTGGCGTA | 59.029 | 50.000 | 0.00 | 0.00 | 0.00 | 4.42 |
3565 | 4842 | 1.345089 | TGGTGCTAGAACTTGGCGTAA | 59.655 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
3566 | 4843 | 2.027561 | TGGTGCTAGAACTTGGCGTAAT | 60.028 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
3567 | 4844 | 3.007635 | GGTGCTAGAACTTGGCGTAATT | 58.992 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
3568 | 4845 | 3.181510 | GGTGCTAGAACTTGGCGTAATTG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
3569 | 4846 | 3.682858 | GTGCTAGAACTTGGCGTAATTGA | 59.317 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3570 | 4847 | 4.332819 | GTGCTAGAACTTGGCGTAATTGAT | 59.667 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
3571 | 4848 | 4.570772 | TGCTAGAACTTGGCGTAATTGATC | 59.429 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
3572 | 4849 | 4.570772 | GCTAGAACTTGGCGTAATTGATCA | 59.429 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
3573 | 4850 | 4.946784 | AGAACTTGGCGTAATTGATCAC | 57.053 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
3574 | 4851 | 4.579869 | AGAACTTGGCGTAATTGATCACT | 58.420 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3575 | 4852 | 5.003804 | AGAACTTGGCGTAATTGATCACTT | 58.996 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
3576 | 4853 | 5.473504 | AGAACTTGGCGTAATTGATCACTTT | 59.526 | 36.000 | 3.40 | 0.00 | 0.00 | 2.66 |
3577 | 4854 | 6.653320 | AGAACTTGGCGTAATTGATCACTTTA | 59.347 | 34.615 | 3.40 | 0.00 | 0.00 | 1.85 |
3578 | 4855 | 6.422776 | ACTTGGCGTAATTGATCACTTTAG | 57.577 | 37.500 | 3.40 | 0.54 | 0.00 | 1.85 |
3579 | 4856 | 5.938125 | ACTTGGCGTAATTGATCACTTTAGT | 59.062 | 36.000 | 3.40 | 0.00 | 0.00 | 2.24 |
3580 | 4857 | 5.794687 | TGGCGTAATTGATCACTTTAGTG | 57.205 | 39.130 | 3.40 | 3.47 | 46.91 | 2.74 |
3581 | 4858 | 4.094294 | TGGCGTAATTGATCACTTTAGTGC | 59.906 | 41.667 | 3.40 | 7.98 | 45.25 | 4.40 |
3582 | 4859 | 4.332819 | GGCGTAATTGATCACTTTAGTGCT | 59.667 | 41.667 | 3.40 | 0.00 | 45.25 | 4.40 |
3583 | 4860 | 5.522460 | GGCGTAATTGATCACTTTAGTGCTA | 59.478 | 40.000 | 3.40 | 0.00 | 45.25 | 3.49 |
3584 | 4861 | 6.292381 | GGCGTAATTGATCACTTTAGTGCTAG | 60.292 | 42.308 | 3.40 | 0.00 | 45.25 | 3.42 |
3585 | 4862 | 6.475727 | GCGTAATTGATCACTTTAGTGCTAGA | 59.524 | 38.462 | 3.40 | 0.00 | 45.25 | 2.43 |
3586 | 4863 | 7.010183 | GCGTAATTGATCACTTTAGTGCTAGAA | 59.990 | 37.037 | 3.40 | 0.00 | 45.25 | 2.10 |
3587 | 4864 | 8.321716 | CGTAATTGATCACTTTAGTGCTAGAAC | 58.678 | 37.037 | 3.40 | 0.00 | 45.25 | 3.01 |
3588 | 4865 | 9.372369 | GTAATTGATCACTTTAGTGCTAGAACT | 57.628 | 33.333 | 8.84 | 8.84 | 45.25 | 3.01 |
3589 | 4866 | 8.854614 | AATTGATCACTTTAGTGCTAGAACTT | 57.145 | 30.769 | 9.19 | 0.00 | 45.25 | 2.66 |
3590 | 4867 | 7.658179 | TTGATCACTTTAGTGCTAGAACTTG | 57.342 | 36.000 | 9.19 | 0.91 | 45.25 | 3.16 |
3591 | 4868 | 6.759272 | TGATCACTTTAGTGCTAGAACTTGT | 58.241 | 36.000 | 9.19 | 3.47 | 45.25 | 3.16 |
3592 | 4869 | 6.646653 | TGATCACTTTAGTGCTAGAACTTGTG | 59.353 | 38.462 | 9.19 | 15.08 | 45.25 | 3.33 |
3593 | 4870 | 5.297547 | TCACTTTAGTGCTAGAACTTGTGG | 58.702 | 41.667 | 21.22 | 9.79 | 45.25 | 4.17 |
3594 | 4871 | 5.057149 | CACTTTAGTGCTAGAACTTGTGGT | 58.943 | 41.667 | 9.19 | 0.95 | 39.39 | 4.16 |
3595 | 4872 | 5.050091 | CACTTTAGTGCTAGAACTTGTGGTG | 60.050 | 44.000 | 9.19 | 9.59 | 39.39 | 4.17 |
3596 | 4873 | 4.682778 | TTAGTGCTAGAACTTGTGGTGT | 57.317 | 40.909 | 9.19 | 0.00 | 0.00 | 4.16 |
3597 | 4874 | 5.794726 | TTAGTGCTAGAACTTGTGGTGTA | 57.205 | 39.130 | 9.19 | 0.00 | 0.00 | 2.90 |
3598 | 4875 | 3.991367 | AGTGCTAGAACTTGTGGTGTAC | 58.009 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
3599 | 4876 | 3.386726 | AGTGCTAGAACTTGTGGTGTACA | 59.613 | 43.478 | 0.00 | 0.00 | 37.56 | 2.90 |
3600 | 4877 | 4.040461 | AGTGCTAGAACTTGTGGTGTACAT | 59.960 | 41.667 | 0.00 | 0.00 | 39.48 | 2.29 |
3601 | 4878 | 4.389077 | GTGCTAGAACTTGTGGTGTACATC | 59.611 | 45.833 | 0.00 | 0.00 | 39.48 | 3.06 |
3602 | 4879 | 3.612860 | GCTAGAACTTGTGGTGTACATCG | 59.387 | 47.826 | 0.00 | 0.00 | 39.48 | 3.84 |
3603 | 4880 | 4.617530 | GCTAGAACTTGTGGTGTACATCGA | 60.618 | 45.833 | 0.00 | 0.00 | 39.48 | 3.59 |
3604 | 4881 | 4.330944 | AGAACTTGTGGTGTACATCGAA | 57.669 | 40.909 | 0.00 | 0.00 | 39.48 | 3.71 |
3605 | 4882 | 4.307432 | AGAACTTGTGGTGTACATCGAAG | 58.693 | 43.478 | 13.56 | 13.56 | 39.48 | 3.79 |
3606 | 4883 | 3.746045 | ACTTGTGGTGTACATCGAAGT | 57.254 | 42.857 | 14.60 | 14.60 | 39.48 | 3.01 |
3607 | 4884 | 3.390135 | ACTTGTGGTGTACATCGAAGTG | 58.610 | 45.455 | 18.02 | 4.16 | 39.48 | 3.16 |
3608 | 4885 | 2.448926 | TGTGGTGTACATCGAAGTGG | 57.551 | 50.000 | 3.02 | 0.00 | 33.42 | 4.00 |
3609 | 4886 | 1.689813 | TGTGGTGTACATCGAAGTGGT | 59.310 | 47.619 | 3.02 | 0.00 | 33.42 | 4.16 |
3610 | 4887 | 2.066262 | GTGGTGTACATCGAAGTGGTG | 58.934 | 52.381 | 3.02 | 0.00 | 0.00 | 4.17 |
3611 | 4888 | 1.076332 | GGTGTACATCGAAGTGGTGC | 58.924 | 55.000 | 3.02 | 0.00 | 0.00 | 5.01 |
3612 | 4889 | 1.606994 | GGTGTACATCGAAGTGGTGCA | 60.607 | 52.381 | 3.02 | 0.34 | 0.00 | 4.57 |
3613 | 4890 | 2.139917 | GTGTACATCGAAGTGGTGCAA | 58.860 | 47.619 | 3.02 | 0.00 | 31.43 | 4.08 |
3614 | 4891 | 2.546368 | GTGTACATCGAAGTGGTGCAAA | 59.454 | 45.455 | 3.02 | 0.00 | 31.43 | 3.68 |
3615 | 4892 | 3.002862 | GTGTACATCGAAGTGGTGCAAAA | 59.997 | 43.478 | 3.02 | 0.00 | 31.43 | 2.44 |
3616 | 4893 | 3.628032 | TGTACATCGAAGTGGTGCAAAAA | 59.372 | 39.130 | 3.02 | 0.00 | 0.00 | 1.94 |
3617 | 4894 | 3.078594 | ACATCGAAGTGGTGCAAAAAC | 57.921 | 42.857 | 0.00 | 0.00 | 0.00 | 2.43 |
3618 | 4895 | 2.687935 | ACATCGAAGTGGTGCAAAAACT | 59.312 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
3619 | 4896 | 3.130340 | ACATCGAAGTGGTGCAAAAACTT | 59.870 | 39.130 | 9.09 | 9.09 | 36.87 | 2.66 |
3620 | 4897 | 3.143807 | TCGAAGTGGTGCAAAAACTTG | 57.856 | 42.857 | 13.05 | 7.28 | 34.37 | 3.16 |
3621 | 4898 | 2.159310 | TCGAAGTGGTGCAAAAACTTGG | 60.159 | 45.455 | 13.05 | 11.97 | 34.37 | 3.61 |
3622 | 4899 | 1.933181 | GAAGTGGTGCAAAAACTTGGC | 59.067 | 47.619 | 13.05 | 0.00 | 34.37 | 4.52 |
3623 | 4900 | 1.194218 | AGTGGTGCAAAAACTTGGCT | 58.806 | 45.000 | 0.00 | 0.00 | 0.00 | 4.75 |
3624 | 4901 | 1.136891 | AGTGGTGCAAAAACTTGGCTC | 59.863 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
3625 | 4902 | 0.102120 | TGGTGCAAAAACTTGGCTCG | 59.898 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
3626 | 4903 | 0.597377 | GGTGCAAAAACTTGGCTCGG | 60.597 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3627 | 4904 | 0.597377 | GTGCAAAAACTTGGCTCGGG | 60.597 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
3628 | 4905 | 1.664649 | GCAAAAACTTGGCTCGGGC | 60.665 | 57.895 | 0.00 | 0.00 | 37.82 | 6.13 |
3629 | 4906 | 1.371635 | CAAAAACTTGGCTCGGGCG | 60.372 | 57.895 | 0.00 | 0.00 | 39.81 | 6.13 |
3630 | 4907 | 1.826487 | AAAAACTTGGCTCGGGCGT | 60.826 | 52.632 | 0.00 | 0.00 | 39.81 | 5.68 |
3631 | 4908 | 2.070654 | AAAAACTTGGCTCGGGCGTG | 62.071 | 55.000 | 0.00 | 0.00 | 39.81 | 5.34 |
3637 | 4914 | 2.822255 | GGCTCGGGCGTGCAAATA | 60.822 | 61.111 | 0.00 | 0.00 | 39.81 | 1.40 |
3638 | 4915 | 2.403586 | GCTCGGGCGTGCAAATAC | 59.596 | 61.111 | 0.00 | 0.00 | 35.06 | 1.89 |
3639 | 4916 | 2.701006 | CTCGGGCGTGCAAATACG | 59.299 | 61.111 | 0.00 | 0.00 | 46.28 | 3.06 |
3640 | 4917 | 2.808958 | CTCGGGCGTGCAAATACGG | 61.809 | 63.158 | 0.00 | 0.00 | 43.87 | 4.02 |
3641 | 4918 | 3.122323 | CGGGCGTGCAAATACGGT | 61.122 | 61.111 | 0.00 | 0.00 | 43.87 | 4.83 |
3642 | 4919 | 2.483288 | GGGCGTGCAAATACGGTG | 59.517 | 61.111 | 0.00 | 0.00 | 43.87 | 4.94 |
3643 | 4920 | 2.329614 | GGGCGTGCAAATACGGTGT | 61.330 | 57.895 | 0.00 | 0.00 | 43.87 | 4.16 |
3644 | 4921 | 1.577421 | GGCGTGCAAATACGGTGTT | 59.423 | 52.632 | 0.00 | 0.00 | 43.87 | 3.32 |
3645 | 4922 | 0.797542 | GGCGTGCAAATACGGTGTTA | 59.202 | 50.000 | 0.00 | 0.00 | 43.87 | 2.41 |
3646 | 4923 | 1.464521 | GGCGTGCAAATACGGTGTTAC | 60.465 | 52.381 | 0.00 | 0.00 | 43.87 | 2.50 |
3647 | 4924 | 1.461897 | GCGTGCAAATACGGTGTTACT | 59.538 | 47.619 | 0.00 | 0.00 | 43.87 | 2.24 |
3648 | 4925 | 2.473376 | GCGTGCAAATACGGTGTTACTC | 60.473 | 50.000 | 0.00 | 0.00 | 43.87 | 2.59 |
3649 | 4926 | 2.222420 | CGTGCAAATACGGTGTTACTCG | 60.222 | 50.000 | 0.00 | 0.00 | 40.22 | 4.18 |
3650 | 4927 | 2.733026 | GTGCAAATACGGTGTTACTCGT | 59.267 | 45.455 | 8.86 | 8.86 | 42.55 | 4.18 |
3651 | 4928 | 2.732500 | TGCAAATACGGTGTTACTCGTG | 59.267 | 45.455 | 12.56 | 0.00 | 40.05 | 4.35 |
3652 | 4929 | 2.733026 | GCAAATACGGTGTTACTCGTGT | 59.267 | 45.455 | 12.56 | 0.00 | 40.05 | 4.49 |
3653 | 4930 | 3.184986 | GCAAATACGGTGTTACTCGTGTT | 59.815 | 43.478 | 12.56 | 9.99 | 41.16 | 3.32 |
3654 | 4931 | 4.318974 | GCAAATACGGTGTTACTCGTGTTT | 60.319 | 41.667 | 15.33 | 15.33 | 46.13 | 2.83 |
3655 | 4932 | 4.977741 | AATACGGTGTTACTCGTGTTTG | 57.022 | 40.909 | 12.56 | 0.00 | 37.41 | 2.93 |
3656 | 4933 | 2.298411 | ACGGTGTTACTCGTGTTTGT | 57.702 | 45.000 | 0.00 | 0.00 | 38.25 | 2.83 |
3657 | 4934 | 3.435105 | ACGGTGTTACTCGTGTTTGTA | 57.565 | 42.857 | 0.00 | 0.00 | 38.25 | 2.41 |
3658 | 4935 | 3.981211 | ACGGTGTTACTCGTGTTTGTAT | 58.019 | 40.909 | 0.00 | 0.00 | 38.25 | 2.29 |
3659 | 4936 | 5.119931 | ACGGTGTTACTCGTGTTTGTATA | 57.880 | 39.130 | 0.00 | 0.00 | 38.25 | 1.47 |
3660 | 4937 | 4.917415 | ACGGTGTTACTCGTGTTTGTATAC | 59.083 | 41.667 | 0.00 | 0.00 | 38.25 | 1.47 |
3661 | 4938 | 4.029418 | CGGTGTTACTCGTGTTTGTATACG | 59.971 | 45.833 | 0.00 | 0.00 | 39.85 | 3.06 |
3662 | 4939 | 4.201523 | GGTGTTACTCGTGTTTGTATACGC | 60.202 | 45.833 | 0.00 | 0.00 | 38.57 | 4.42 |
3663 | 4940 | 3.919804 | TGTTACTCGTGTTTGTATACGCC | 59.080 | 43.478 | 0.00 | 0.00 | 38.57 | 5.68 |
3664 | 4941 | 2.728690 | ACTCGTGTTTGTATACGCCA | 57.271 | 45.000 | 0.00 | 0.00 | 38.57 | 5.69 |
3665 | 4942 | 2.602878 | ACTCGTGTTTGTATACGCCAG | 58.397 | 47.619 | 0.00 | 0.00 | 38.57 | 4.85 |
3666 | 4943 | 1.323534 | CTCGTGTTTGTATACGCCAGC | 59.676 | 52.381 | 0.00 | 0.00 | 38.57 | 4.85 |
3667 | 4944 | 0.024491 | CGTGTTTGTATACGCCAGCG | 59.976 | 55.000 | 11.05 | 11.05 | 46.03 | 5.18 |
3668 | 4945 | 1.352114 | GTGTTTGTATACGCCAGCGA | 58.648 | 50.000 | 20.32 | 2.73 | 42.83 | 4.93 |
3669 | 4946 | 1.060122 | GTGTTTGTATACGCCAGCGAC | 59.940 | 52.381 | 20.32 | 7.23 | 42.83 | 5.19 |
3670 | 4947 | 0.296642 | GTTTGTATACGCCAGCGACG | 59.703 | 55.000 | 20.32 | 0.00 | 42.83 | 5.12 |
3671 | 4948 | 0.170784 | TTTGTATACGCCAGCGACGA | 59.829 | 50.000 | 20.32 | 3.55 | 42.83 | 4.20 |
3672 | 4949 | 0.382873 | TTGTATACGCCAGCGACGAT | 59.617 | 50.000 | 20.32 | 10.96 | 42.83 | 3.73 |
3673 | 4950 | 0.317519 | TGTATACGCCAGCGACGATG | 60.318 | 55.000 | 20.32 | 6.03 | 42.83 | 3.84 |
3674 | 4951 | 0.040692 | GTATACGCCAGCGACGATGA | 60.041 | 55.000 | 20.32 | 0.00 | 42.83 | 2.92 |
3675 | 4952 | 0.879090 | TATACGCCAGCGACGATGAT | 59.121 | 50.000 | 20.32 | 2.30 | 42.83 | 2.45 |
3676 | 4953 | 0.664466 | ATACGCCAGCGACGATGATG | 60.664 | 55.000 | 20.32 | 8.79 | 42.83 | 3.07 |
3677 | 4954 | 1.720694 | TACGCCAGCGACGATGATGA | 61.721 | 55.000 | 20.32 | 0.00 | 42.83 | 2.92 |
3678 | 4955 | 2.298629 | CGCCAGCGACGATGATGAG | 61.299 | 63.158 | 15.87 | 0.00 | 42.83 | 2.90 |
3679 | 4956 | 1.953138 | GCCAGCGACGATGATGAGG | 60.953 | 63.158 | 15.87 | 0.00 | 0.00 | 3.86 |
3680 | 4957 | 1.953138 | CCAGCGACGATGATGAGGC | 60.953 | 63.158 | 15.87 | 0.00 | 0.00 | 4.70 |
3681 | 4958 | 1.227060 | CAGCGACGATGATGAGGCA | 60.227 | 57.895 | 7.46 | 0.00 | 0.00 | 4.75 |
3682 | 4959 | 0.599466 | CAGCGACGATGATGAGGCAT | 60.599 | 55.000 | 7.46 | 0.00 | 0.00 | 4.40 |
3683 | 4960 | 0.599466 | AGCGACGATGATGAGGCATG | 60.599 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
3684 | 4961 | 1.858041 | CGACGATGATGAGGCATGC | 59.142 | 57.895 | 9.90 | 9.90 | 0.00 | 4.06 |
3685 | 4962 | 1.563435 | CGACGATGATGAGGCATGCC | 61.563 | 60.000 | 30.12 | 30.12 | 0.00 | 4.40 |
3686 | 4963 | 0.533531 | GACGATGATGAGGCATGCCA | 60.534 | 55.000 | 37.18 | 19.62 | 38.92 | 4.92 |
3687 | 4964 | 0.534427 | ACGATGATGAGGCATGCCAG | 60.534 | 55.000 | 37.18 | 18.74 | 38.92 | 4.85 |
3688 | 4965 | 1.853114 | CGATGATGAGGCATGCCAGC | 61.853 | 60.000 | 37.18 | 27.62 | 38.92 | 4.85 |
3727 | 5004 | 4.394712 | GTGAGGACAGGGCGGGTG | 62.395 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
3741 | 5019 | 2.050442 | GGTGGCGCGTTCCTTTTG | 60.050 | 61.111 | 8.43 | 0.00 | 0.00 | 2.44 |
3742 | 5020 | 2.729491 | GTGGCGCGTTCCTTTTGC | 60.729 | 61.111 | 8.43 | 0.00 | 0.00 | 3.68 |
3743 | 5021 | 3.212682 | TGGCGCGTTCCTTTTGCA | 61.213 | 55.556 | 8.43 | 0.00 | 0.00 | 4.08 |
3746 | 5024 | 1.148759 | GGCGCGTTCCTTTTGCAAAA | 61.149 | 50.000 | 22.61 | 22.61 | 0.00 | 2.44 |
3792 | 5073 | 2.285756 | TCACGTAAAAGCCACTTTCACG | 59.714 | 45.455 | 12.87 | 12.87 | 46.66 | 4.35 |
3794 | 5075 | 2.635444 | CGTAAAAGCCACTTTCACGTG | 58.365 | 47.619 | 9.94 | 9.94 | 39.42 | 4.49 |
3799 | 5080 | 5.607119 | AAAAGCCACTTTCACGTGTATAG | 57.393 | 39.130 | 16.51 | 13.17 | 31.99 | 1.31 |
3801 | 5082 | 5.395682 | AAGCCACTTTCACGTGTATAGTA | 57.604 | 39.130 | 16.51 | 0.00 | 33.07 | 1.82 |
3802 | 5083 | 5.395682 | AGCCACTTTCACGTGTATAGTAA | 57.604 | 39.130 | 16.51 | 0.00 | 33.07 | 2.24 |
3807 | 5088 | 6.959311 | CCACTTTCACGTGTATAGTAATTTGC | 59.041 | 38.462 | 16.51 | 0.00 | 33.07 | 3.68 |
3810 | 5091 | 8.175069 | ACTTTCACGTGTATAGTAATTTGCATG | 58.825 | 33.333 | 16.51 | 0.00 | 0.00 | 4.06 |
3811 | 5092 | 7.603963 | TTCACGTGTATAGTAATTTGCATGT | 57.396 | 32.000 | 16.51 | 0.00 | 0.00 | 3.21 |
3813 | 5094 | 8.880878 | TCACGTGTATAGTAATTTGCATGTAT | 57.119 | 30.769 | 16.51 | 0.00 | 0.00 | 2.29 |
3814 | 5095 | 8.760569 | TCACGTGTATAGTAATTTGCATGTATG | 58.239 | 33.333 | 16.51 | 0.00 | 0.00 | 2.39 |
3823 | 5104 | 6.830324 | AGTAATTTGCATGTATGACATCTGGT | 59.170 | 34.615 | 0.00 | 0.00 | 36.53 | 4.00 |
3825 | 5106 | 2.921821 | TGCATGTATGACATCTGGTGG | 58.078 | 47.619 | 0.00 | 0.00 | 36.53 | 4.61 |
3827 | 5108 | 2.421952 | GCATGTATGACATCTGGTGGGT | 60.422 | 50.000 | 0.00 | 0.00 | 36.53 | 4.51 |
3828 | 5109 | 3.470709 | CATGTATGACATCTGGTGGGTC | 58.529 | 50.000 | 0.00 | 0.00 | 36.53 | 4.46 |
3829 | 5110 | 1.837439 | TGTATGACATCTGGTGGGTCC | 59.163 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
3831 | 5112 | 1.371467 | ATGACATCTGGTGGGTCCAA | 58.629 | 50.000 | 0.00 | 0.00 | 46.59 | 3.53 |
3832 | 5113 | 0.400213 | TGACATCTGGTGGGTCCAAC | 59.600 | 55.000 | 0.00 | 0.00 | 46.59 | 3.77 |
3833 | 5114 | 0.673644 | GACATCTGGTGGGTCCAACG | 60.674 | 60.000 | 0.17 | 0.00 | 46.59 | 4.10 |
3834 | 5115 | 1.374947 | CATCTGGTGGGTCCAACGT | 59.625 | 57.895 | 0.17 | 0.00 | 46.59 | 3.99 |
3835 | 5116 | 0.955428 | CATCTGGTGGGTCCAACGTG | 60.955 | 60.000 | 0.17 | 0.00 | 46.59 | 4.49 |
3837 | 5118 | 1.597027 | CTGGTGGGTCCAACGTGTC | 60.597 | 63.158 | 0.17 | 0.00 | 46.59 | 3.67 |
3839 | 5120 | 1.597027 | GGTGGGTCCAACGTGTCAG | 60.597 | 63.158 | 0.00 | 0.00 | 35.97 | 3.51 |
3840 | 5121 | 2.110213 | TGGGTCCAACGTGTCAGC | 59.890 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
3841 | 5122 | 2.110213 | GGGTCCAACGTGTCAGCA | 59.890 | 61.111 | 0.00 | 0.00 | 0.00 | 4.41 |
3842 | 5123 | 1.525077 | GGGTCCAACGTGTCAGCAA | 60.525 | 57.895 | 0.00 | 0.00 | 0.00 | 3.91 |
3843 | 5124 | 1.098712 | GGGTCCAACGTGTCAGCAAA | 61.099 | 55.000 | 0.00 | 0.00 | 0.00 | 3.68 |
3845 | 5126 | 1.336755 | GGTCCAACGTGTCAGCAAAAT | 59.663 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
3847 | 5128 | 3.190535 | GGTCCAACGTGTCAGCAAAATAT | 59.809 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
3848 | 5129 | 4.403453 | GTCCAACGTGTCAGCAAAATATC | 58.597 | 43.478 | 0.00 | 0.00 | 0.00 | 1.63 |
3849 | 5130 | 4.068599 | TCCAACGTGTCAGCAAAATATCA | 58.931 | 39.130 | 0.00 | 0.00 | 0.00 | 2.15 |
3850 | 5131 | 4.083537 | TCCAACGTGTCAGCAAAATATCAC | 60.084 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
3851 | 5132 | 4.320129 | CCAACGTGTCAGCAAAATATCACA | 60.320 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
3853 | 5134 | 5.431420 | ACGTGTCAGCAAAATATCACAAA | 57.569 | 34.783 | 0.00 | 0.00 | 0.00 | 2.83 |
3854 | 5135 | 6.012658 | ACGTGTCAGCAAAATATCACAAAT | 57.987 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
3857 | 5138 | 8.888716 | ACGTGTCAGCAAAATATCACAAATATA | 58.111 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
3858 | 5139 | 9.882996 | CGTGTCAGCAAAATATCACAAATATAT | 57.117 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
3885 | 5166 | 9.866655 | AATAGAATGAAAAATAGGCCATAGTGA | 57.133 | 29.630 | 5.01 | 0.00 | 0.00 | 3.41 |
3886 | 5167 | 9.866655 | ATAGAATGAAAAATAGGCCATAGTGAA | 57.133 | 29.630 | 5.01 | 0.00 | 0.00 | 3.18 |
3887 | 5168 | 8.773033 | AGAATGAAAAATAGGCCATAGTGAAT | 57.227 | 30.769 | 5.01 | 0.00 | 0.00 | 2.57 |
3889 | 5170 | 6.959639 | TGAAAAATAGGCCATAGTGAATCC | 57.040 | 37.500 | 5.01 | 0.00 | 0.00 | 3.01 |
3892 | 5173 | 4.974645 | AATAGGCCATAGTGAATCCGAA | 57.025 | 40.909 | 5.01 | 0.00 | 0.00 | 4.30 |
3893 | 5174 | 2.622064 | AGGCCATAGTGAATCCGAAC | 57.378 | 50.000 | 5.01 | 0.00 | 0.00 | 3.95 |
3897 | 5178 | 3.069729 | GGCCATAGTGAATCCGAACTAGT | 59.930 | 47.826 | 0.00 | 0.00 | 32.62 | 2.57 |
3900 | 5181 | 5.661458 | CCATAGTGAATCCGAACTAGTGTT | 58.339 | 41.667 | 0.00 | 0.00 | 39.42 | 3.32 |
3901 | 5182 | 5.749109 | CCATAGTGAATCCGAACTAGTGTTC | 59.251 | 44.000 | 0.00 | 0.00 | 46.59 | 3.18 |
3912 | 5193 | 5.368256 | GAACTAGTGTTCTCGGTCTAACA | 57.632 | 43.478 | 0.00 | 0.00 | 46.56 | 2.41 |
3913 | 5194 | 5.373981 | AACTAGTGTTCTCGGTCTAACAG | 57.626 | 43.478 | 0.00 | 0.00 | 36.33 | 3.16 |
3914 | 5195 | 3.757493 | ACTAGTGTTCTCGGTCTAACAGG | 59.243 | 47.826 | 0.00 | 0.00 | 36.33 | 4.00 |
3916 | 5197 | 0.242825 | TGTTCTCGGTCTAACAGGCG | 59.757 | 55.000 | 0.00 | 0.00 | 32.11 | 5.52 |
3917 | 5198 | 0.243095 | GTTCTCGGTCTAACAGGCGT | 59.757 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
3918 | 5199 | 0.524862 | TTCTCGGTCTAACAGGCGTC | 59.475 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
3919 | 5200 | 1.139095 | CTCGGTCTAACAGGCGTCC | 59.861 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
3921 | 5202 | 2.508663 | GGTCTAACAGGCGTCCGC | 60.509 | 66.667 | 2.45 | 2.45 | 41.06 | 5.54 |
3922 | 5203 | 2.879462 | GTCTAACAGGCGTCCGCG | 60.879 | 66.667 | 0.00 | 0.00 | 43.06 | 6.46 |
3923 | 5204 | 4.124351 | TCTAACAGGCGTCCGCGG | 62.124 | 66.667 | 22.12 | 22.12 | 43.06 | 6.46 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
37 | 39 | 9.557338 | CTGCTAATACATATTCTACGGTTCTAC | 57.443 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
38 | 40 | 9.511272 | TCTGCTAATACATATTCTACGGTTCTA | 57.489 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
39 | 41 | 8.405418 | TCTGCTAATACATATTCTACGGTTCT | 57.595 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
40 | 42 | 9.640963 | ATTCTGCTAATACATATTCTACGGTTC | 57.359 | 33.333 | 0.00 | 0.00 | 0.00 | 3.62 |
41 | 43 | 9.640963 | GATTCTGCTAATACATATTCTACGGTT | 57.359 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
42 | 44 | 8.803235 | TGATTCTGCTAATACATATTCTACGGT | 58.197 | 33.333 | 0.00 | 0.00 | 0.00 | 4.83 |
43 | 45 | 9.639601 | TTGATTCTGCTAATACATATTCTACGG | 57.360 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
140 | 142 | 4.189231 | AGTGGCATGGTCGTATTTAACTC | 58.811 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
146 | 148 | 7.633193 | TTTAATAAAGTGGCATGGTCGTATT | 57.367 | 32.000 | 0.00 | 0.00 | 0.00 | 1.89 |
150 | 152 | 7.643764 | CAGTTATTTAATAAAGTGGCATGGTCG | 59.356 | 37.037 | 0.00 | 0.00 | 0.00 | 4.79 |
179 | 185 | 6.969828 | ATAGAAAAGTGAGAAATGACGACC | 57.030 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
359 | 368 | 3.555547 | CGACGATTCACAAGATGGCATTA | 59.444 | 43.478 | 0.00 | 0.00 | 0.00 | 1.90 |
367 | 376 | 1.268265 | CGATGCGACGATTCACAAGA | 58.732 | 50.000 | 0.00 | 0.00 | 35.09 | 3.02 |
484 | 502 | 3.036091 | TGTAAGTACATCCCCTACCTGC | 58.964 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
590 | 609 | 6.436847 | TGTTTTTAAGGCAGGATGATGAATCA | 59.563 | 34.615 | 0.00 | 0.00 | 39.69 | 2.57 |
594 | 613 | 5.951148 | TCATGTTTTTAAGGCAGGATGATGA | 59.049 | 36.000 | 0.00 | 0.00 | 39.69 | 2.92 |
598 | 617 | 5.902613 | TCTCATGTTTTTAAGGCAGGATG | 57.097 | 39.130 | 0.00 | 0.00 | 40.87 | 3.51 |
649 | 759 | 7.299134 | AGAGGGAGTATTACACATTAGCTACT | 58.701 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
674 | 784 | 9.706691 | CAAAGTTATACTAAGGTTGAGACTTGA | 57.293 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
675 | 785 | 9.490379 | ACAAAGTTATACTAAGGTTGAGACTTG | 57.510 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
744 | 865 | 3.818961 | CGTGACAAATCATGTGCTTCT | 57.181 | 42.857 | 0.00 | 0.00 | 44.12 | 2.85 |
775 | 896 | 2.598099 | TCCTCGTGTGCCGGTGTA | 60.598 | 61.111 | 1.90 | 0.00 | 37.11 | 2.90 |
777 | 898 | 2.149803 | TTACTCCTCGTGTGCCGGTG | 62.150 | 60.000 | 1.90 | 0.00 | 37.11 | 4.94 |
778 | 899 | 1.255667 | ATTACTCCTCGTGTGCCGGT | 61.256 | 55.000 | 1.90 | 0.00 | 37.11 | 5.28 |
779 | 900 | 0.742505 | TATTACTCCTCGTGTGCCGG | 59.257 | 55.000 | 0.00 | 0.00 | 37.11 | 6.13 |
780 | 901 | 2.223735 | ACATATTACTCCTCGTGTGCCG | 60.224 | 50.000 | 0.00 | 0.00 | 38.13 | 5.69 |
781 | 902 | 3.181479 | TGACATATTACTCCTCGTGTGCC | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 5.01 |
782 | 903 | 4.041740 | TGACATATTACTCCTCGTGTGC | 57.958 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
783 | 904 | 4.098044 | ACCTGACATATTACTCCTCGTGTG | 59.902 | 45.833 | 0.00 | 0.00 | 0.00 | 3.82 |
852 | 979 | 0.395173 | GTGGGCATTTATCCCGGTGT | 60.395 | 55.000 | 0.00 | 0.00 | 46.92 | 4.16 |
854 | 981 | 1.153046 | CGTGGGCATTTATCCCGGT | 60.153 | 57.895 | 0.00 | 0.00 | 46.92 | 5.28 |
855 | 982 | 2.551912 | GCGTGGGCATTTATCCCGG | 61.552 | 63.158 | 0.00 | 0.00 | 46.92 | 5.73 |
856 | 983 | 2.551912 | GGCGTGGGCATTTATCCCG | 61.552 | 63.158 | 0.00 | 0.00 | 46.92 | 5.14 |
857 | 984 | 0.109723 | TAGGCGTGGGCATTTATCCC | 59.890 | 55.000 | 0.00 | 0.00 | 44.17 | 3.85 |
858 | 985 | 2.084546 | GATAGGCGTGGGCATTTATCC | 58.915 | 52.381 | 0.00 | 0.00 | 42.47 | 2.59 |
859 | 986 | 3.059352 | AGATAGGCGTGGGCATTTATC | 57.941 | 47.619 | 0.00 | 0.00 | 42.47 | 1.75 |
1056 | 1210 | 2.567497 | GCCCACAGCAACAGCACAT | 61.567 | 57.895 | 0.00 | 0.00 | 42.97 | 3.21 |
1277 | 1437 | 4.020617 | CCTGAGCCTTCCACGCCA | 62.021 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
1348 | 1518 | 1.591619 | CATGCATGACACGCTCACTAG | 59.408 | 52.381 | 22.59 | 0.00 | 0.00 | 2.57 |
1349 | 1519 | 1.643880 | CATGCATGACACGCTCACTA | 58.356 | 50.000 | 22.59 | 0.00 | 0.00 | 2.74 |
1350 | 1520 | 1.642037 | GCATGCATGACACGCTCACT | 61.642 | 55.000 | 30.64 | 0.00 | 33.76 | 3.41 |
1351 | 1521 | 1.226211 | GCATGCATGACACGCTCAC | 60.226 | 57.895 | 30.64 | 5.13 | 33.76 | 3.51 |
1352 | 1522 | 1.235948 | TTGCATGCATGACACGCTCA | 61.236 | 50.000 | 30.64 | 13.45 | 38.60 | 4.26 |
1435 | 1625 | 5.691754 | AGAAAATAAAAGCAAACAAGGAGCG | 59.308 | 36.000 | 0.00 | 0.00 | 0.00 | 5.03 |
1478 | 1703 | 7.517734 | GCTCACATACGTAGAAAAACAGAACAA | 60.518 | 37.037 | 0.08 | 0.00 | 0.00 | 2.83 |
1552 | 1789 | 4.467795 | TGAAACAAGAAATTCCACCCACAA | 59.532 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
1600 | 1837 | 1.226831 | CAACGCACGGGCTTTTTGT | 60.227 | 52.632 | 8.62 | 0.00 | 38.10 | 2.83 |
1863 | 2229 | 7.840342 | AGATCTTTGTGTCACACTCATAATC | 57.160 | 36.000 | 9.90 | 6.20 | 35.11 | 1.75 |
2049 | 2639 | 3.961414 | GACTCGGGGGCCAAACCA | 61.961 | 66.667 | 4.39 | 0.00 | 42.05 | 3.67 |
2154 | 2746 | 4.035017 | ACAAAACGAAAGAAAGCATGACG | 58.965 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
2232 | 3098 | 4.271533 | TGTGTAGCGAAAACAAAGGTACTG | 59.728 | 41.667 | 0.00 | 0.00 | 40.86 | 2.74 |
2383 | 3372 | 7.629157 | TCCATAATTCTCTGTAACATCAACCA | 58.371 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
2851 | 4101 | 0.460311 | ATCGTCCGAGCCTAACAAGG | 59.540 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2864 | 4114 | 2.023673 | TCATGGGCAATCAAATCGTCC | 58.976 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
2890 | 4140 | 2.060383 | TCTGGATGAGCGACCCCTG | 61.060 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
3134 | 4384 | 9.248291 | GTTATGACATTGAAAAACTGTTCACAT | 57.752 | 29.630 | 0.00 | 0.00 | 37.24 | 3.21 |
3244 | 4518 | 8.189709 | TGCAATGTAAATATTTATTTGCGCAA | 57.810 | 26.923 | 29.70 | 21.02 | 41.90 | 4.85 |
3246 | 4520 | 8.630494 | CATGCAATGTAAATATTTATTTGCGC | 57.370 | 30.769 | 29.70 | 21.16 | 41.90 | 6.09 |
3295 | 4570 | 3.175929 | GTCCACACGTTTCAAAAACCAG | 58.824 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
3309 | 4584 | 9.039870 | TCATTTCATTTAACAAAATGTCCACAC | 57.960 | 29.630 | 9.87 | 0.00 | 39.96 | 3.82 |
3381 | 4656 | 3.058501 | CACAATGTTTTCACGGACTACCC | 60.059 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
3383 | 4658 | 5.202640 | GTTCACAATGTTTTCACGGACTAC | 58.797 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
3524 | 4801 | 5.891551 | ACCACCAGTGTAATTGACTCTTTTT | 59.108 | 36.000 | 0.00 | 0.00 | 29.24 | 1.94 |
3540 | 4817 | 1.072331 | CCAAGTTCTAGCACCACCAGT | 59.928 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
3541 | 4818 | 1.813513 | CCAAGTTCTAGCACCACCAG | 58.186 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3542 | 4819 | 0.250727 | GCCAAGTTCTAGCACCACCA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3543 | 4820 | 1.298859 | CGCCAAGTTCTAGCACCACC | 61.299 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3544 | 4821 | 0.602905 | ACGCCAAGTTCTAGCACCAC | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3545 | 4822 | 0.970640 | TACGCCAAGTTCTAGCACCA | 59.029 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3546 | 4823 | 2.088950 | TTACGCCAAGTTCTAGCACC | 57.911 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
3547 | 4824 | 3.682858 | TCAATTACGCCAAGTTCTAGCAC | 59.317 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
3548 | 4825 | 3.932822 | TCAATTACGCCAAGTTCTAGCA | 58.067 | 40.909 | 0.00 | 0.00 | 0.00 | 3.49 |
3549 | 4826 | 4.570772 | TGATCAATTACGCCAAGTTCTAGC | 59.429 | 41.667 | 0.00 | 0.00 | 0.00 | 3.42 |
3550 | 4827 | 5.812642 | AGTGATCAATTACGCCAAGTTCTAG | 59.187 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3551 | 4828 | 5.730550 | AGTGATCAATTACGCCAAGTTCTA | 58.269 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
3552 | 4829 | 4.579869 | AGTGATCAATTACGCCAAGTTCT | 58.420 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
3553 | 4830 | 4.946784 | AGTGATCAATTACGCCAAGTTC | 57.053 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
3554 | 4831 | 5.705609 | AAAGTGATCAATTACGCCAAGTT | 57.294 | 34.783 | 9.10 | 0.00 | 0.00 | 2.66 |
3555 | 4832 | 5.938125 | ACTAAAGTGATCAATTACGCCAAGT | 59.062 | 36.000 | 9.10 | 3.98 | 0.00 | 3.16 |
3556 | 4833 | 6.422776 | ACTAAAGTGATCAATTACGCCAAG | 57.577 | 37.500 | 9.10 | 3.42 | 0.00 | 3.61 |
3572 | 4849 | 5.057149 | CACCACAAGTTCTAGCACTAAAGT | 58.943 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
3573 | 4850 | 5.057149 | ACACCACAAGTTCTAGCACTAAAG | 58.943 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
3574 | 4851 | 5.031066 | ACACCACAAGTTCTAGCACTAAA | 57.969 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
3575 | 4852 | 4.682778 | ACACCACAAGTTCTAGCACTAA | 57.317 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
3576 | 4853 | 4.585581 | TGTACACCACAAGTTCTAGCACTA | 59.414 | 41.667 | 0.00 | 0.00 | 32.95 | 2.74 |
3577 | 4854 | 3.386726 | TGTACACCACAAGTTCTAGCACT | 59.613 | 43.478 | 0.00 | 0.00 | 32.95 | 4.40 |
3578 | 4855 | 3.724374 | TGTACACCACAAGTTCTAGCAC | 58.276 | 45.455 | 0.00 | 0.00 | 32.95 | 4.40 |
3579 | 4856 | 4.566004 | GATGTACACCACAAGTTCTAGCA | 58.434 | 43.478 | 0.00 | 0.00 | 41.55 | 3.49 |
3580 | 4857 | 3.612860 | CGATGTACACCACAAGTTCTAGC | 59.387 | 47.826 | 0.00 | 0.00 | 41.55 | 3.42 |
3581 | 4858 | 5.055642 | TCGATGTACACCACAAGTTCTAG | 57.944 | 43.478 | 0.00 | 0.00 | 41.55 | 2.43 |
3582 | 4859 | 5.010314 | ACTTCGATGTACACCACAAGTTCTA | 59.990 | 40.000 | 0.00 | 0.00 | 41.55 | 2.10 |
3583 | 4860 | 4.202223 | ACTTCGATGTACACCACAAGTTCT | 60.202 | 41.667 | 0.00 | 0.00 | 41.55 | 3.01 |
3584 | 4861 | 4.056050 | ACTTCGATGTACACCACAAGTTC | 58.944 | 43.478 | 0.00 | 0.00 | 41.55 | 3.01 |
3585 | 4862 | 3.807622 | CACTTCGATGTACACCACAAGTT | 59.192 | 43.478 | 0.00 | 0.00 | 41.55 | 2.66 |
3586 | 4863 | 3.390135 | CACTTCGATGTACACCACAAGT | 58.610 | 45.455 | 0.00 | 1.60 | 41.55 | 3.16 |
3587 | 4864 | 2.736721 | CCACTTCGATGTACACCACAAG | 59.263 | 50.000 | 0.00 | 0.94 | 41.55 | 3.16 |
3588 | 4865 | 2.103432 | ACCACTTCGATGTACACCACAA | 59.897 | 45.455 | 0.00 | 0.00 | 41.55 | 3.33 |
3589 | 4866 | 1.689813 | ACCACTTCGATGTACACCACA | 59.310 | 47.619 | 0.00 | 0.00 | 42.69 | 4.17 |
3590 | 4867 | 2.066262 | CACCACTTCGATGTACACCAC | 58.934 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
3591 | 4868 | 1.606994 | GCACCACTTCGATGTACACCA | 60.607 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
3592 | 4869 | 1.076332 | GCACCACTTCGATGTACACC | 58.924 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3593 | 4870 | 1.790755 | TGCACCACTTCGATGTACAC | 58.209 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3594 | 4871 | 2.535012 | TTGCACCACTTCGATGTACA | 57.465 | 45.000 | 3.33 | 0.00 | 0.00 | 2.90 |
3595 | 4872 | 3.889196 | TTTTGCACCACTTCGATGTAC | 57.111 | 42.857 | 3.33 | 0.00 | 0.00 | 2.90 |
3596 | 4873 | 3.880490 | AGTTTTTGCACCACTTCGATGTA | 59.120 | 39.130 | 3.33 | 0.00 | 0.00 | 2.29 |
3597 | 4874 | 2.687935 | AGTTTTTGCACCACTTCGATGT | 59.312 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
3598 | 4875 | 3.354089 | AGTTTTTGCACCACTTCGATG | 57.646 | 42.857 | 0.00 | 0.00 | 0.00 | 3.84 |
3599 | 4876 | 3.490761 | CCAAGTTTTTGCACCACTTCGAT | 60.491 | 43.478 | 2.08 | 0.00 | 32.79 | 3.59 |
3600 | 4877 | 2.159310 | CCAAGTTTTTGCACCACTTCGA | 60.159 | 45.455 | 2.08 | 0.00 | 32.79 | 3.71 |
3601 | 4878 | 2.192624 | CCAAGTTTTTGCACCACTTCG | 58.807 | 47.619 | 2.08 | 0.00 | 32.79 | 3.79 |
3602 | 4879 | 1.933181 | GCCAAGTTTTTGCACCACTTC | 59.067 | 47.619 | 2.08 | 0.00 | 32.79 | 3.01 |
3603 | 4880 | 1.554617 | AGCCAAGTTTTTGCACCACTT | 59.445 | 42.857 | 0.00 | 0.00 | 32.79 | 3.16 |
3604 | 4881 | 1.136891 | GAGCCAAGTTTTTGCACCACT | 59.863 | 47.619 | 0.00 | 0.00 | 32.79 | 4.00 |
3605 | 4882 | 1.570813 | GAGCCAAGTTTTTGCACCAC | 58.429 | 50.000 | 0.00 | 0.00 | 32.79 | 4.16 |
3606 | 4883 | 0.102120 | CGAGCCAAGTTTTTGCACCA | 59.898 | 50.000 | 0.00 | 0.00 | 32.79 | 4.17 |
3607 | 4884 | 0.597377 | CCGAGCCAAGTTTTTGCACC | 60.597 | 55.000 | 0.00 | 0.00 | 32.79 | 5.01 |
3608 | 4885 | 0.597377 | CCCGAGCCAAGTTTTTGCAC | 60.597 | 55.000 | 0.00 | 0.00 | 32.79 | 4.57 |
3609 | 4886 | 1.739049 | CCCGAGCCAAGTTTTTGCA | 59.261 | 52.632 | 0.00 | 0.00 | 32.79 | 4.08 |
3610 | 4887 | 1.664649 | GCCCGAGCCAAGTTTTTGC | 60.665 | 57.895 | 0.00 | 0.00 | 32.79 | 3.68 |
3611 | 4888 | 1.371635 | CGCCCGAGCCAAGTTTTTG | 60.372 | 57.895 | 0.00 | 0.00 | 34.57 | 2.44 |
3612 | 4889 | 1.826487 | ACGCCCGAGCCAAGTTTTT | 60.826 | 52.632 | 0.00 | 0.00 | 34.57 | 1.94 |
3613 | 4890 | 2.203294 | ACGCCCGAGCCAAGTTTT | 60.203 | 55.556 | 0.00 | 0.00 | 34.57 | 2.43 |
3614 | 4891 | 2.978010 | CACGCCCGAGCCAAGTTT | 60.978 | 61.111 | 0.00 | 0.00 | 34.57 | 2.66 |
3619 | 4896 | 3.613877 | TATTTGCACGCCCGAGCCA | 62.614 | 57.895 | 7.57 | 0.00 | 34.57 | 4.75 |
3620 | 4897 | 2.822255 | TATTTGCACGCCCGAGCC | 60.822 | 61.111 | 7.57 | 0.00 | 34.57 | 4.70 |
3621 | 4898 | 2.403586 | GTATTTGCACGCCCGAGC | 59.596 | 61.111 | 3.18 | 3.18 | 0.00 | 5.03 |
3622 | 4899 | 2.701006 | CGTATTTGCACGCCCGAG | 59.299 | 61.111 | 0.00 | 0.00 | 34.78 | 4.63 |
3623 | 4900 | 2.816083 | CCGTATTTGCACGCCCGA | 60.816 | 61.111 | 0.00 | 0.00 | 40.59 | 5.14 |
3624 | 4901 | 3.122323 | ACCGTATTTGCACGCCCG | 61.122 | 61.111 | 0.00 | 0.00 | 40.59 | 6.13 |
3625 | 4902 | 1.858372 | AACACCGTATTTGCACGCCC | 61.858 | 55.000 | 0.00 | 0.00 | 40.59 | 6.13 |
3626 | 4903 | 0.797542 | TAACACCGTATTTGCACGCC | 59.202 | 50.000 | 0.00 | 0.00 | 40.59 | 5.68 |
3627 | 4904 | 1.461897 | AGTAACACCGTATTTGCACGC | 59.538 | 47.619 | 0.00 | 0.00 | 40.59 | 5.34 |
3628 | 4905 | 2.222420 | CGAGTAACACCGTATTTGCACG | 60.222 | 50.000 | 0.00 | 0.00 | 41.59 | 5.34 |
3629 | 4906 | 2.733026 | ACGAGTAACACCGTATTTGCAC | 59.267 | 45.455 | 0.00 | 0.00 | 37.23 | 4.57 |
3630 | 4907 | 2.732500 | CACGAGTAACACCGTATTTGCA | 59.267 | 45.455 | 0.00 | 0.00 | 37.23 | 4.08 |
3631 | 4908 | 2.733026 | ACACGAGTAACACCGTATTTGC | 59.267 | 45.455 | 0.00 | 0.00 | 37.23 | 3.68 |
3632 | 4909 | 4.977741 | AACACGAGTAACACCGTATTTG | 57.022 | 40.909 | 0.00 | 0.00 | 37.23 | 2.32 |
3633 | 4910 | 4.810491 | ACAAACACGAGTAACACCGTATTT | 59.190 | 37.500 | 0.00 | 0.00 | 36.06 | 1.40 |
3634 | 4911 | 4.370917 | ACAAACACGAGTAACACCGTATT | 58.629 | 39.130 | 0.00 | 0.00 | 37.23 | 1.89 |
3635 | 4912 | 3.981211 | ACAAACACGAGTAACACCGTAT | 58.019 | 40.909 | 0.00 | 0.00 | 37.23 | 3.06 |
3636 | 4913 | 3.435105 | ACAAACACGAGTAACACCGTA | 57.565 | 42.857 | 0.00 | 0.00 | 37.23 | 4.02 |
3637 | 4914 | 2.298411 | ACAAACACGAGTAACACCGT | 57.702 | 45.000 | 0.00 | 0.00 | 39.88 | 4.83 |
3638 | 4915 | 4.029418 | CGTATACAAACACGAGTAACACCG | 59.971 | 45.833 | 3.32 | 0.00 | 40.56 | 4.94 |
3639 | 4916 | 4.201523 | GCGTATACAAACACGAGTAACACC | 60.202 | 45.833 | 3.32 | 0.00 | 40.56 | 4.16 |
3640 | 4917 | 4.201523 | GGCGTATACAAACACGAGTAACAC | 60.202 | 45.833 | 3.32 | 0.00 | 40.56 | 3.32 |
3641 | 4918 | 3.919804 | GGCGTATACAAACACGAGTAACA | 59.080 | 43.478 | 3.32 | 0.00 | 40.56 | 2.41 |
3642 | 4919 | 3.919804 | TGGCGTATACAAACACGAGTAAC | 59.080 | 43.478 | 3.32 | 0.00 | 40.56 | 2.50 |
3643 | 4920 | 4.168014 | CTGGCGTATACAAACACGAGTAA | 58.832 | 43.478 | 3.32 | 0.00 | 40.56 | 2.24 |
3644 | 4921 | 3.761657 | CTGGCGTATACAAACACGAGTA | 58.238 | 45.455 | 3.32 | 0.00 | 40.56 | 2.59 |
3645 | 4922 | 2.602878 | CTGGCGTATACAAACACGAGT | 58.397 | 47.619 | 3.32 | 0.00 | 40.56 | 4.18 |
3646 | 4923 | 1.323534 | GCTGGCGTATACAAACACGAG | 59.676 | 52.381 | 3.32 | 0.00 | 40.56 | 4.18 |
3647 | 4924 | 1.352114 | GCTGGCGTATACAAACACGA | 58.648 | 50.000 | 3.32 | 0.00 | 40.56 | 4.35 |
3648 | 4925 | 0.024491 | CGCTGGCGTATACAAACACG | 59.976 | 55.000 | 6.83 | 0.00 | 41.04 | 4.49 |
3649 | 4926 | 1.060122 | GTCGCTGGCGTATACAAACAC | 59.940 | 52.381 | 14.55 | 0.00 | 40.74 | 3.32 |
3650 | 4927 | 1.352114 | GTCGCTGGCGTATACAAACA | 58.648 | 50.000 | 14.55 | 0.00 | 40.74 | 2.83 |
3651 | 4928 | 0.296642 | CGTCGCTGGCGTATACAAAC | 59.703 | 55.000 | 14.55 | 3.14 | 40.74 | 2.93 |
3652 | 4929 | 0.170784 | TCGTCGCTGGCGTATACAAA | 59.829 | 50.000 | 14.55 | 0.00 | 40.74 | 2.83 |
3653 | 4930 | 0.382873 | ATCGTCGCTGGCGTATACAA | 59.617 | 50.000 | 14.55 | 0.00 | 40.74 | 2.41 |
3654 | 4931 | 0.317519 | CATCGTCGCTGGCGTATACA | 60.318 | 55.000 | 14.55 | 0.00 | 40.74 | 2.29 |
3655 | 4932 | 0.040692 | TCATCGTCGCTGGCGTATAC | 60.041 | 55.000 | 14.55 | 5.19 | 40.74 | 1.47 |
3656 | 4933 | 0.879090 | ATCATCGTCGCTGGCGTATA | 59.121 | 50.000 | 14.55 | 2.15 | 40.74 | 1.47 |
3657 | 4934 | 0.664466 | CATCATCGTCGCTGGCGTAT | 60.664 | 55.000 | 14.55 | 4.93 | 40.74 | 3.06 |
3658 | 4935 | 1.299089 | CATCATCGTCGCTGGCGTA | 60.299 | 57.895 | 14.55 | 2.83 | 40.74 | 4.42 |
3659 | 4936 | 2.583319 | CATCATCGTCGCTGGCGT | 60.583 | 61.111 | 14.55 | 0.00 | 40.74 | 5.68 |
3660 | 4937 | 2.278792 | TCATCATCGTCGCTGGCG | 60.279 | 61.111 | 8.80 | 8.80 | 41.35 | 5.69 |
3661 | 4938 | 1.953138 | CCTCATCATCGTCGCTGGC | 60.953 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
3662 | 4939 | 1.953138 | GCCTCATCATCGTCGCTGG | 60.953 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
3663 | 4940 | 0.599466 | ATGCCTCATCATCGTCGCTG | 60.599 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
3664 | 4941 | 0.599466 | CATGCCTCATCATCGTCGCT | 60.599 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
3665 | 4942 | 1.858041 | CATGCCTCATCATCGTCGC | 59.142 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
3666 | 4943 | 1.563435 | GGCATGCCTCATCATCGTCG | 61.563 | 60.000 | 29.98 | 0.00 | 0.00 | 5.12 |
3667 | 4944 | 0.533531 | TGGCATGCCTCATCATCGTC | 60.534 | 55.000 | 35.53 | 6.75 | 36.94 | 4.20 |
3668 | 4945 | 0.534427 | CTGGCATGCCTCATCATCGT | 60.534 | 55.000 | 35.53 | 0.00 | 36.94 | 3.73 |
3669 | 4946 | 1.853114 | GCTGGCATGCCTCATCATCG | 61.853 | 60.000 | 35.53 | 14.85 | 36.94 | 3.84 |
3670 | 4947 | 1.957562 | GCTGGCATGCCTCATCATC | 59.042 | 57.895 | 35.53 | 8.69 | 36.94 | 2.92 |
3671 | 4948 | 4.175988 | GCTGGCATGCCTCATCAT | 57.824 | 55.556 | 35.53 | 0.00 | 36.94 | 2.45 |
3710 | 4987 | 4.394712 | CACCCGCCCTGTCCTCAC | 62.395 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
3723 | 5000 | 3.292159 | AAAAGGAACGCGCCACCC | 61.292 | 61.111 | 5.73 | 1.71 | 0.00 | 4.61 |
3724 | 5001 | 2.050442 | CAAAAGGAACGCGCCACC | 60.050 | 61.111 | 5.73 | 7.44 | 0.00 | 4.61 |
3725 | 5002 | 2.729491 | GCAAAAGGAACGCGCCAC | 60.729 | 61.111 | 5.73 | 0.00 | 0.00 | 5.01 |
3726 | 5003 | 2.284798 | TTTGCAAAAGGAACGCGCCA | 62.285 | 50.000 | 10.02 | 0.00 | 0.00 | 5.69 |
3727 | 5004 | 1.148759 | TTTTGCAAAAGGAACGCGCC | 61.149 | 50.000 | 20.46 | 0.00 | 0.00 | 6.53 |
3728 | 5005 | 0.647925 | TTTTTGCAAAAGGAACGCGC | 59.352 | 45.000 | 22.78 | 0.00 | 0.00 | 6.86 |
3766 | 5044 | 5.124138 | TGAAAGTGGCTTTTACGTGAGAAAA | 59.876 | 36.000 | 0.00 | 0.00 | 33.49 | 2.29 |
3768 | 5046 | 4.034742 | GTGAAAGTGGCTTTTACGTGAGAA | 59.965 | 41.667 | 0.00 | 0.00 | 33.49 | 2.87 |
3770 | 5048 | 3.873529 | GTGAAAGTGGCTTTTACGTGAG | 58.126 | 45.455 | 0.00 | 0.00 | 33.49 | 3.51 |
3775 | 5053 | 3.685836 | ACACGTGAAAGTGGCTTTTAC | 57.314 | 42.857 | 25.01 | 6.49 | 45.80 | 2.01 |
3776 | 5054 | 6.225318 | ACTATACACGTGAAAGTGGCTTTTA | 58.775 | 36.000 | 25.01 | 0.00 | 45.80 | 1.52 |
3777 | 5055 | 5.061179 | ACTATACACGTGAAAGTGGCTTTT | 58.939 | 37.500 | 25.01 | 0.00 | 45.80 | 2.27 |
3778 | 5056 | 4.638304 | ACTATACACGTGAAAGTGGCTTT | 58.362 | 39.130 | 25.01 | 0.00 | 45.80 | 3.51 |
3779 | 5057 | 4.267349 | ACTATACACGTGAAAGTGGCTT | 57.733 | 40.909 | 25.01 | 0.00 | 45.80 | 4.35 |
3781 | 5059 | 6.657836 | AATTACTATACACGTGAAAGTGGC | 57.342 | 37.500 | 25.01 | 0.00 | 45.80 | 5.01 |
3786 | 5064 | 8.035165 | ACATGCAAATTACTATACACGTGAAA | 57.965 | 30.769 | 25.01 | 10.36 | 0.00 | 2.69 |
3799 | 5080 | 6.914215 | CACCAGATGTCATACATGCAAATTAC | 59.086 | 38.462 | 0.00 | 0.00 | 39.27 | 1.89 |
3801 | 5082 | 5.163488 | CCACCAGATGTCATACATGCAAATT | 60.163 | 40.000 | 0.00 | 0.00 | 39.27 | 1.82 |
3802 | 5083 | 4.340097 | CCACCAGATGTCATACATGCAAAT | 59.660 | 41.667 | 0.00 | 0.00 | 39.27 | 2.32 |
3807 | 5088 | 3.470709 | GACCCACCAGATGTCATACATG | 58.529 | 50.000 | 0.00 | 0.00 | 39.27 | 3.21 |
3810 | 5091 | 1.837439 | TGGACCCACCAGATGTCATAC | 59.163 | 52.381 | 0.00 | 0.00 | 44.64 | 2.39 |
3811 | 5092 | 2.262266 | TGGACCCACCAGATGTCATA | 57.738 | 50.000 | 0.00 | 0.00 | 44.64 | 2.15 |
3813 | 5094 | 4.658427 | TGGACCCACCAGATGTCA | 57.342 | 55.556 | 0.00 | 0.00 | 44.64 | 3.58 |
3823 | 5104 | 2.110213 | GCTGACACGTTGGACCCA | 59.890 | 61.111 | 0.00 | 0.00 | 0.00 | 4.51 |
3825 | 5106 | 0.736053 | TTTTGCTGACACGTTGGACC | 59.264 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3827 | 5108 | 4.068599 | TGATATTTTGCTGACACGTTGGA | 58.931 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
3828 | 5109 | 4.158384 | GTGATATTTTGCTGACACGTTGG | 58.842 | 43.478 | 0.00 | 0.00 | 0.00 | 3.77 |
3829 | 5110 | 4.782156 | TGTGATATTTTGCTGACACGTTG | 58.218 | 39.130 | 0.00 | 0.00 | 0.00 | 4.10 |
3831 | 5112 | 5.431420 | TTTGTGATATTTTGCTGACACGT | 57.569 | 34.783 | 0.00 | 0.00 | 0.00 | 4.49 |
3832 | 5113 | 9.882996 | ATATATTTGTGATATTTTGCTGACACG | 57.117 | 29.630 | 0.00 | 0.00 | 0.00 | 4.49 |
3859 | 5140 | 9.866655 | TCACTATGGCCTATTTTTCATTCTATT | 57.133 | 29.630 | 3.32 | 0.00 | 0.00 | 1.73 |
3862 | 5143 | 8.773033 | ATTCACTATGGCCTATTTTTCATTCT | 57.227 | 30.769 | 3.32 | 0.00 | 0.00 | 2.40 |
3863 | 5144 | 8.084684 | GGATTCACTATGGCCTATTTTTCATTC | 58.915 | 37.037 | 3.32 | 0.00 | 0.00 | 2.67 |
3864 | 5145 | 7.255590 | CGGATTCACTATGGCCTATTTTTCATT | 60.256 | 37.037 | 3.32 | 0.00 | 0.00 | 2.57 |
3865 | 5146 | 6.207417 | CGGATTCACTATGGCCTATTTTTCAT | 59.793 | 38.462 | 3.32 | 0.00 | 0.00 | 2.57 |
3867 | 5148 | 5.763204 | TCGGATTCACTATGGCCTATTTTTC | 59.237 | 40.000 | 3.32 | 0.00 | 0.00 | 2.29 |
3868 | 5149 | 5.690865 | TCGGATTCACTATGGCCTATTTTT | 58.309 | 37.500 | 3.32 | 0.00 | 0.00 | 1.94 |
3869 | 5150 | 5.304686 | TCGGATTCACTATGGCCTATTTT | 57.695 | 39.130 | 3.32 | 0.00 | 0.00 | 1.82 |
3870 | 5151 | 4.974645 | TCGGATTCACTATGGCCTATTT | 57.025 | 40.909 | 3.32 | 0.00 | 0.00 | 1.40 |
3871 | 5152 | 4.348168 | AGTTCGGATTCACTATGGCCTATT | 59.652 | 41.667 | 3.32 | 0.00 | 0.00 | 1.73 |
3873 | 5154 | 3.305720 | AGTTCGGATTCACTATGGCCTA | 58.694 | 45.455 | 3.32 | 0.00 | 0.00 | 3.93 |
3874 | 5155 | 2.119495 | AGTTCGGATTCACTATGGCCT | 58.881 | 47.619 | 3.32 | 0.00 | 0.00 | 5.19 |
3875 | 5156 | 2.622064 | AGTTCGGATTCACTATGGCC | 57.378 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3877 | 5158 | 5.263968 | ACACTAGTTCGGATTCACTATGG | 57.736 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
3878 | 5159 | 6.814076 | GAACACTAGTTCGGATTCACTATG | 57.186 | 41.667 | 0.00 | 0.00 | 44.11 | 2.23 |
3892 | 5173 | 3.757493 | CCTGTTAGACCGAGAACACTAGT | 59.243 | 47.826 | 0.00 | 0.00 | 32.31 | 2.57 |
3893 | 5174 | 3.427773 | GCCTGTTAGACCGAGAACACTAG | 60.428 | 52.174 | 0.00 | 0.00 | 32.31 | 2.57 |
3897 | 5178 | 0.242825 | CGCCTGTTAGACCGAGAACA | 59.757 | 55.000 | 0.00 | 0.00 | 34.49 | 3.18 |
3900 | 5181 | 1.310933 | GGACGCCTGTTAGACCGAGA | 61.311 | 60.000 | 0.00 | 0.00 | 0.00 | 4.04 |
3901 | 5182 | 1.139095 | GGACGCCTGTTAGACCGAG | 59.861 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
3903 | 5184 | 2.202570 | CGGACGCCTGTTAGACCG | 60.203 | 66.667 | 0.00 | 0.00 | 38.99 | 4.79 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.