Multiple sequence alignment - TraesCS2A01G518400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G518400 | chr2A | 100.000 | 7880 | 0 | 0 | 1 | 7880 | 742139156 | 742131277 | 0.000000e+00 | 14552.0 |
1 | TraesCS2A01G518400 | chr2A | 90.588 | 850 | 67 | 11 | 85 | 928 | 20374969 | 20374127 | 0.000000e+00 | 1114.0 |
2 | TraesCS2A01G518400 | chr2A | 90.868 | 657 | 55 | 5 | 1 | 654 | 20382806 | 20382152 | 0.000000e+00 | 876.0 |
3 | TraesCS2A01G518400 | chr2A | 92.735 | 234 | 15 | 2 | 692 | 924 | 20619132 | 20619364 | 3.520000e-88 | 337.0 |
4 | TraesCS2A01G518400 | chr2A | 94.118 | 170 | 10 | 0 | 6932 | 7101 | 741416255 | 741416086 | 7.840000e-65 | 259.0 |
5 | TraesCS2A01G518400 | chr2A | 93.056 | 144 | 10 | 0 | 6667 | 6810 | 741417871 | 741417728 | 2.230000e-50 | 211.0 |
6 | TraesCS2A01G518400 | chr2A | 93.662 | 142 | 5 | 1 | 7743 | 7880 | 741379824 | 741379683 | 8.010000e-50 | 209.0 |
7 | TraesCS2A01G518400 | chr2A | 91.209 | 91 | 1 | 6 | 5892 | 5977 | 726911052 | 726910964 | 5.000000e-22 | 117.0 |
8 | TraesCS2A01G518400 | chr2D | 96.287 | 5844 | 149 | 29 | 1534 | 7328 | 609438990 | 609433166 | 0.000000e+00 | 9527.0 |
9 | TraesCS2A01G518400 | chr2D | 95.094 | 530 | 11 | 5 | 938 | 1465 | 609439865 | 609439349 | 0.000000e+00 | 821.0 |
10 | TraesCS2A01G518400 | chr2D | 96.262 | 107 | 3 | 1 | 7360 | 7465 | 609432903 | 609432797 | 2.920000e-39 | 174.0 |
11 | TraesCS2A01G518400 | chr2D | 91.209 | 91 | 1 | 6 | 5892 | 5977 | 272795895 | 272795807 | 5.000000e-22 | 117.0 |
12 | TraesCS2A01G518400 | chr2B | 95.701 | 4024 | 119 | 23 | 938 | 4930 | 743734360 | 743730360 | 0.000000e+00 | 6423.0 |
13 | TraesCS2A01G518400 | chr2B | 95.212 | 1086 | 22 | 10 | 4964 | 6044 | 743730362 | 743729302 | 0.000000e+00 | 1690.0 |
14 | TraesCS2A01G518400 | chr2B | 89.880 | 1334 | 68 | 30 | 6082 | 7354 | 743729304 | 743727977 | 0.000000e+00 | 1653.0 |
15 | TraesCS2A01G518400 | chr2B | 94.577 | 922 | 47 | 3 | 1 | 921 | 36451866 | 36452785 | 0.000000e+00 | 1423.0 |
16 | TraesCS2A01G518400 | chr2B | 88.525 | 549 | 57 | 5 | 376 | 922 | 1662508 | 1663052 | 0.000000e+00 | 660.0 |
17 | TraesCS2A01G518400 | chr2B | 87.949 | 390 | 42 | 3 | 1 | 390 | 1659588 | 1659972 | 9.320000e-124 | 455.0 |
18 | TraesCS2A01G518400 | chr2B | 92.275 | 233 | 16 | 2 | 1113 | 1344 | 181699323 | 181699554 | 5.890000e-86 | 329.0 |
19 | TraesCS2A01G518400 | chr2B | 91.818 | 220 | 9 | 4 | 7670 | 7880 | 743727900 | 743727681 | 1.660000e-76 | 298.0 |
20 | TraesCS2A01G518400 | chr2B | 97.115 | 104 | 3 | 0 | 818 | 921 | 520222790 | 520222687 | 8.130000e-40 | 176.0 |
21 | TraesCS2A01G518400 | chr2B | 97.087 | 103 | 3 | 0 | 7360 | 7462 | 743727926 | 743727824 | 2.920000e-39 | 174.0 |
22 | TraesCS2A01G518400 | chr7D | 95.983 | 921 | 35 | 2 | 1 | 920 | 442799623 | 442800542 | 0.000000e+00 | 1495.0 |
23 | TraesCS2A01G518400 | chr1B | 92.849 | 923 | 49 | 4 | 1 | 921 | 664289483 | 664288576 | 0.000000e+00 | 1323.0 |
24 | TraesCS2A01G518400 | chr1B | 89.513 | 267 | 16 | 5 | 1078 | 1344 | 217554382 | 217554636 | 2.120000e-85 | 327.0 |
25 | TraesCS2A01G518400 | chr4B | 93.823 | 858 | 52 | 1 | 1 | 857 | 179801242 | 179802099 | 0.000000e+00 | 1290.0 |
26 | TraesCS2A01G518400 | chr4B | 94.444 | 54 | 2 | 1 | 869 | 921 | 179738361 | 179738308 | 1.820000e-11 | 82.4 |
27 | TraesCS2A01G518400 | chr1A | 90.285 | 772 | 68 | 4 | 156 | 925 | 564430593 | 564429827 | 0.000000e+00 | 1003.0 |
28 | TraesCS2A01G518400 | chr3A | 94.035 | 285 | 17 | 0 | 5 | 289 | 141817019 | 141817303 | 4.370000e-117 | 433.0 |
29 | TraesCS2A01G518400 | chr6A | 71.003 | 738 | 186 | 25 | 21 | 744 | 15889156 | 15889879 | 1.370000e-32 | 152.0 |
30 | TraesCS2A01G518400 | chr6A | 92.222 | 90 | 1 | 6 | 5892 | 5977 | 445904343 | 445904256 | 1.070000e-23 | 122.0 |
31 | TraesCS2A01G518400 | chr5D | 91.111 | 90 | 2 | 6 | 5892 | 5977 | 329122107 | 329122020 | 5.000000e-22 | 117.0 |
32 | TraesCS2A01G518400 | chr5D | 97.143 | 35 | 0 | 1 | 7648 | 7682 | 377943337 | 377943370 | 3.070000e-04 | 58.4 |
33 | TraesCS2A01G518400 | chr3B | 91.209 | 91 | 1 | 6 | 5892 | 5977 | 201525008 | 201525096 | 5.000000e-22 | 117.0 |
34 | TraesCS2A01G518400 | chrUn | 90.217 | 92 | 1 | 7 | 5892 | 5977 | 23290155 | 23290066 | 6.460000e-21 | 113.0 |
35 | TraesCS2A01G518400 | chrUn | 90.217 | 92 | 1 | 7 | 5892 | 5977 | 93411634 | 93411545 | 6.460000e-21 | 113.0 |
36 | TraesCS2A01G518400 | chr5B | 96.875 | 32 | 1 | 0 | 7641 | 7672 | 451149366 | 451149397 | 4.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G518400 | chr2A | 742131277 | 742139156 | 7879 | True | 14552.000000 | 14552 | 100.0000 | 1 | 7880 | 1 | chr2A.!!$R5 | 7879 |
1 | TraesCS2A01G518400 | chr2A | 20374127 | 20374969 | 842 | True | 1114.000000 | 1114 | 90.5880 | 85 | 928 | 1 | chr2A.!!$R1 | 843 |
2 | TraesCS2A01G518400 | chr2A | 20382152 | 20382806 | 654 | True | 876.000000 | 876 | 90.8680 | 1 | 654 | 1 | chr2A.!!$R2 | 653 |
3 | TraesCS2A01G518400 | chr2A | 741416086 | 741417871 | 1785 | True | 235.000000 | 259 | 93.5870 | 6667 | 7101 | 2 | chr2A.!!$R6 | 434 |
4 | TraesCS2A01G518400 | chr2D | 609432797 | 609439865 | 7068 | True | 3507.333333 | 9527 | 95.8810 | 938 | 7465 | 3 | chr2D.!!$R2 | 6527 |
5 | TraesCS2A01G518400 | chr2B | 743727681 | 743734360 | 6679 | True | 2047.600000 | 6423 | 93.9396 | 938 | 7880 | 5 | chr2B.!!$R2 | 6942 |
6 | TraesCS2A01G518400 | chr2B | 36451866 | 36452785 | 919 | False | 1423.000000 | 1423 | 94.5770 | 1 | 921 | 1 | chr2B.!!$F1 | 920 |
7 | TraesCS2A01G518400 | chr2B | 1659588 | 1663052 | 3464 | False | 557.500000 | 660 | 88.2370 | 1 | 922 | 2 | chr2B.!!$F3 | 921 |
8 | TraesCS2A01G518400 | chr7D | 442799623 | 442800542 | 919 | False | 1495.000000 | 1495 | 95.9830 | 1 | 920 | 1 | chr7D.!!$F1 | 919 |
9 | TraesCS2A01G518400 | chr1B | 664288576 | 664289483 | 907 | True | 1323.000000 | 1323 | 92.8490 | 1 | 921 | 1 | chr1B.!!$R1 | 920 |
10 | TraesCS2A01G518400 | chr4B | 179801242 | 179802099 | 857 | False | 1290.000000 | 1290 | 93.8230 | 1 | 857 | 1 | chr4B.!!$F1 | 856 |
11 | TraesCS2A01G518400 | chr1A | 564429827 | 564430593 | 766 | True | 1003.000000 | 1003 | 90.2850 | 156 | 925 | 1 | chr1A.!!$R1 | 769 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
203 | 205 | 1.477553 | ATGGCGTTGGATGAAAGCAT | 58.522 | 45.000 | 0.00 | 0.00 | 40.51 | 3.79 | F |
1033 | 3597 | 0.324460 | TCAACAAACCCCAAACCCGT | 60.324 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 | F |
1708 | 4572 | 1.610522 | CTCTTTGTGGCAAGTCAAGGG | 59.389 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 | F |
2453 | 5322 | 1.943340 | GCCCTACTGTAAGAAGCATGC | 59.057 | 52.381 | 10.51 | 10.51 | 37.43 | 4.06 | F |
2903 | 5776 | 3.134804 | AGAGTGGGTATTTTCATCGAGGG | 59.865 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 | F |
3462 | 6336 | 4.116238 | GAGCACTAAAGATGACTGGCTAC | 58.884 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 | F |
4982 | 7869 | 2.125106 | CTTACCGCTCCCCACAGC | 60.125 | 66.667 | 0.00 | 0.00 | 35.90 | 4.40 | F |
5272 | 8159 | 0.462581 | GCAATGCGATGGTGAGGAGA | 60.463 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 | F |
5535 | 8427 | 0.578683 | CAGTTGTGTCACAGAGTGCG | 59.421 | 55.000 | 5.67 | 0.00 | 32.98 | 5.34 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1527 | 4095 | 0.313987 | GCCGAAAACAGGGGAAACAG | 59.686 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 | R |
2411 | 5280 | 1.032014 | AAACAATCACGCAAGGCAGT | 58.968 | 45.000 | 0.00 | 0.00 | 46.39 | 4.40 | R |
2767 | 5636 | 1.134670 | GCCTGGAGTAATCTGAAGCGT | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 5.07 | R |
4353 | 7227 | 2.955660 | GGTTTCACCTGTTCCAACATCA | 59.044 | 45.455 | 0.00 | 0.00 | 38.41 | 3.07 | R |
4481 | 7355 | 1.477700 | ACCATGCTGCGCAACATATTT | 59.522 | 42.857 | 24.66 | 10.06 | 43.62 | 1.40 | R |
5232 | 8119 | 1.490910 | CCCAATCTACTGGTTCCCCTC | 59.509 | 57.143 | 0.00 | 0.00 | 34.33 | 4.30 | R |
6651 | 9572 | 0.389817 | CTTCGTCGCCCATGTCTTGA | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 | R |
6771 | 9695 | 0.752658 | CATAGTCGTCCAGGGCATCA | 59.247 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 | R |
7511 | 12134 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
150 | 151 | 7.657354 | AGAAATGATTGCCTTTTTGGTAGAAAC | 59.343 | 33.333 | 0.00 | 0.00 | 38.35 | 2.78 |
203 | 205 | 1.477553 | ATGGCGTTGGATGAAAGCAT | 58.522 | 45.000 | 0.00 | 0.00 | 40.51 | 3.79 |
260 | 262 | 6.479884 | AGACTTATTCTCTCCAGCAAAACAT | 58.520 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
336 | 338 | 6.635755 | TCTTATTTCGGGGGCAAAAATTTAG | 58.364 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
357 | 360 | 7.724305 | TTAGTCTGACGCTTCTTTTAAATGT | 57.276 | 32.000 | 1.52 | 0.00 | 0.00 | 2.71 |
359 | 362 | 7.352719 | AGTCTGACGCTTCTTTTAAATGTAG | 57.647 | 36.000 | 1.52 | 4.07 | 0.00 | 2.74 |
559 | 3114 | 4.017126 | GCAAATTAGCCAACCTACCTTCT | 58.983 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
562 | 3117 | 3.604875 | TTAGCCAACCTACCTTCTTCG | 57.395 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
617 | 3172 | 4.816786 | GCAAAAATGTTTTGGCTGATGT | 57.183 | 36.364 | 13.68 | 0.00 | 42.46 | 3.06 |
705 | 3260 | 7.124147 | TCGCATGTATTCCATATATCCAGAGAA | 59.876 | 37.037 | 0.00 | 0.00 | 30.71 | 2.87 |
719 | 3274 | 5.635278 | TCCAGAGAAATCAATGGCATAGA | 57.365 | 39.130 | 0.00 | 0.00 | 32.63 | 1.98 |
820 | 3376 | 1.833630 | CTTGCCCTGTCATCTCCACTA | 59.166 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
991 | 3553 | 4.401837 | AGTCCTACATAAAACCGACTCTCC | 59.598 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
1000 | 3562 | 1.915141 | ACCGACTCTCCCTCGTTTTA | 58.085 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
1005 | 3567 | 4.243270 | CGACTCTCCCTCGTTTTATGTTT | 58.757 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
1033 | 3597 | 0.324460 | TCAACAAACCCCAAACCCGT | 60.324 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1090 | 3657 | 3.537874 | CCCTCGATCGACCACCCC | 61.538 | 72.222 | 15.15 | 0.00 | 0.00 | 4.95 |
1128 | 3695 | 4.081030 | GCATCGGCATCGGCATCG | 62.081 | 66.667 | 0.00 | 0.00 | 43.71 | 3.84 |
1516 | 4084 | 3.626222 | CCGAGGGGTATTTTGGATTTCCA | 60.626 | 47.826 | 0.00 | 0.00 | 45.94 | 3.53 |
1527 | 4095 | 3.287867 | TGGATTTCCAGATTCCTGCTC | 57.712 | 47.619 | 0.00 | 0.00 | 42.01 | 4.26 |
1529 | 4097 | 3.212685 | GGATTTCCAGATTCCTGCTCTG | 58.787 | 50.000 | 0.00 | 0.00 | 39.07 | 3.35 |
1531 | 4099 | 3.795688 | TTTCCAGATTCCTGCTCTGTT | 57.204 | 42.857 | 0.00 | 0.00 | 38.77 | 3.16 |
1549 | 4407 | 2.340673 | TTTCCCCTGTTTTCGGCGGA | 62.341 | 55.000 | 7.21 | 0.00 | 0.00 | 5.54 |
1607 | 4466 | 5.163622 | GCTTGGCAGTCTAAAATTATGAGCA | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1708 | 4572 | 1.610522 | CTCTTTGTGGCAAGTCAAGGG | 59.389 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
1853 | 4717 | 3.467803 | AGTAGTGTGGAAGCAAGTGTTC | 58.532 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
1861 | 4725 | 2.224314 | GGAAGCAAGTGTTCCTTTCTCG | 59.776 | 50.000 | 0.00 | 0.00 | 40.46 | 4.04 |
1879 | 4746 | 5.209818 | TCTCGGTAAGAAGAACACAATGT | 57.790 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
1971 | 4838 | 4.639334 | ACTGCTGCATGATTACAGATAGG | 58.361 | 43.478 | 1.31 | 0.00 | 35.90 | 2.57 |
2005 | 4872 | 4.460034 | TGATTGAAAGTGTGATGGTGATGG | 59.540 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2021 | 4888 | 4.923281 | GGTGATGGTTAGTTGCATGTTTTC | 59.077 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2029 | 4896 | 9.019656 | TGGTTAGTTGCATGTTTTCTATTGTAT | 57.980 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
2267 | 5135 | 5.333645 | CCTTCTGTTCAGTCGTTTTCTCATG | 60.334 | 44.000 | 0.00 | 0.00 | 0.00 | 3.07 |
2410 | 5279 | 6.826668 | TGTTTTGATGATGTCCGAGGTATAT | 58.173 | 36.000 | 0.00 | 0.00 | 0.00 | 0.86 |
2411 | 5280 | 7.958088 | TGTTTTGATGATGTCCGAGGTATATA | 58.042 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
2419 | 5288 | 3.572682 | TGTCCGAGGTATATACTGCCTTG | 59.427 | 47.826 | 12.54 | 5.65 | 40.55 | 3.61 |
2453 | 5322 | 1.943340 | GCCCTACTGTAAGAAGCATGC | 59.057 | 52.381 | 10.51 | 10.51 | 37.43 | 4.06 |
2461 | 5330 | 5.256474 | ACTGTAAGAAGCATGCCTGTTAAT | 58.744 | 37.500 | 15.66 | 0.00 | 37.43 | 1.40 |
2474 | 5343 | 8.299570 | GCATGCCTGTTAATTAGCTGTATAATT | 58.700 | 33.333 | 6.36 | 0.00 | 38.55 | 1.40 |
2526 | 5395 | 4.670221 | GCCTTCGCTCTTTGTGACAATAAG | 60.670 | 45.833 | 0.00 | 0.95 | 34.56 | 1.73 |
2767 | 5636 | 3.322541 | TCTCACACGGTAAAGATTCCACA | 59.677 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
2903 | 5776 | 3.134804 | AGAGTGGGTATTTTCATCGAGGG | 59.865 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2976 | 5849 | 5.978814 | AGGATCACCAGTTCATAGTGTAAC | 58.021 | 41.667 | 0.00 | 0.00 | 38.94 | 2.50 |
3462 | 6336 | 4.116238 | GAGCACTAAAGATGACTGGCTAC | 58.884 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
4481 | 7355 | 4.995487 | ACTGAGTATGACGACGATAGCATA | 59.005 | 41.667 | 0.00 | 1.39 | 42.67 | 3.14 |
4602 | 7488 | 3.438087 | CACTAGCCACCATGTCTTCAAAG | 59.562 | 47.826 | 0.00 | 0.00 | 0.00 | 2.77 |
4940 | 7827 | 4.023536 | TCGTTAAAGTTGCCTTTGGTGATC | 60.024 | 41.667 | 0.00 | 0.00 | 41.03 | 2.92 |
4941 | 7828 | 4.261405 | CGTTAAAGTTGCCTTTGGTGATCA | 60.261 | 41.667 | 0.00 | 0.00 | 41.03 | 2.92 |
4982 | 7869 | 2.125106 | CTTACCGCTCCCCACAGC | 60.125 | 66.667 | 0.00 | 0.00 | 35.90 | 4.40 |
5272 | 8159 | 0.462581 | GCAATGCGATGGTGAGGAGA | 60.463 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
5361 | 8248 | 1.270625 | TGTTGCTCAAGTTAGACGGGG | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 5.73 |
5363 | 8250 | 1.192146 | TGCTCAAGTTAGACGGGGCT | 61.192 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
5535 | 8427 | 0.578683 | CAGTTGTGTCACAGAGTGCG | 59.421 | 55.000 | 5.67 | 0.00 | 32.98 | 5.34 |
5536 | 8428 | 1.154205 | AGTTGTGTCACAGAGTGCGC | 61.154 | 55.000 | 5.67 | 0.00 | 32.98 | 6.09 |
5537 | 8429 | 2.237066 | TTGTGTCACAGAGTGCGCG | 61.237 | 57.895 | 0.00 | 0.00 | 32.98 | 6.86 |
5538 | 8430 | 2.658593 | GTGTCACAGAGTGCGCGT | 60.659 | 61.111 | 8.43 | 0.00 | 32.98 | 6.01 |
5539 | 8431 | 2.658268 | TGTCACAGAGTGCGCGTG | 60.658 | 61.111 | 8.43 | 4.24 | 32.98 | 5.34 |
5540 | 8432 | 2.354656 | GTCACAGAGTGCGCGTGA | 60.355 | 61.111 | 8.43 | 10.46 | 37.33 | 4.35 |
5541 | 8433 | 2.354656 | TCACAGAGTGCGCGTGAC | 60.355 | 61.111 | 8.43 | 4.98 | 34.83 | 3.67 |
5542 | 8434 | 2.658268 | CACAGAGTGCGCGTGACA | 60.658 | 61.111 | 8.43 | 0.00 | 32.23 | 3.58 |
5543 | 8435 | 2.355126 | ACAGAGTGCGCGTGACAG | 60.355 | 61.111 | 8.43 | 2.34 | 0.00 | 3.51 |
5544 | 8436 | 2.050077 | CAGAGTGCGCGTGACAGA | 60.050 | 61.111 | 8.43 | 0.00 | 0.00 | 3.41 |
5545 | 8437 | 2.085262 | CAGAGTGCGCGTGACAGAG | 61.085 | 63.158 | 8.43 | 0.00 | 0.00 | 3.35 |
5546 | 8438 | 2.255554 | GAGTGCGCGTGACAGAGA | 59.744 | 61.111 | 8.43 | 0.00 | 0.00 | 3.10 |
5547 | 8439 | 1.799519 | GAGTGCGCGTGACAGAGAG | 60.800 | 63.158 | 8.43 | 0.00 | 0.00 | 3.20 |
5548 | 8440 | 2.049985 | GTGCGCGTGACAGAGAGT | 60.050 | 61.111 | 8.43 | 0.00 | 0.00 | 3.24 |
5788 | 8707 | 6.757897 | TTGTCAGAACTTCTCAAAACATGT | 57.242 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
6003 | 8922 | 5.628666 | GCATCTATTCCTAGCAGCCATACAT | 60.629 | 44.000 | 0.00 | 0.00 | 0.00 | 2.29 |
6045 | 8964 | 5.360591 | AGTTGTCTTGTGGAGAAAGTGTAG | 58.639 | 41.667 | 0.00 | 0.00 | 35.79 | 2.74 |
6072 | 8991 | 5.564550 | AGGAAACTTCATGCTGATACTTGT | 58.435 | 37.500 | 0.00 | 0.00 | 37.44 | 3.16 |
6160 | 9079 | 4.500477 | GCACTCCGCATAAATGAAAATGAC | 59.500 | 41.667 | 0.00 | 0.00 | 41.79 | 3.06 |
6272 | 9191 | 4.080356 | TCCTACCAAGATGCTATGCAGTTT | 60.080 | 41.667 | 0.00 | 0.00 | 43.65 | 2.66 |
6279 | 9198 | 7.037438 | CCAAGATGCTATGCAGTTTTTAACAT | 58.963 | 34.615 | 0.00 | 0.00 | 43.65 | 2.71 |
6380 | 9299 | 7.546667 | GGGTTTAACACATTCGTCATTACTCTA | 59.453 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
6528 | 9449 | 4.103785 | CCACCACAGATCCCAGATCTAAAT | 59.896 | 45.833 | 6.78 | 0.00 | 0.00 | 1.40 |
6631 | 9552 | 1.986210 | GCAGAAGCTGGGGCCAATT | 60.986 | 57.895 | 4.39 | 0.00 | 39.73 | 2.32 |
6632 | 9553 | 1.547472 | GCAGAAGCTGGGGCCAATTT | 61.547 | 55.000 | 4.39 | 0.00 | 39.73 | 1.82 |
6636 | 9557 | 2.027385 | GAAGCTGGGGCCAATTTAGAG | 58.973 | 52.381 | 4.39 | 0.00 | 39.73 | 2.43 |
6651 | 9572 | 4.640771 | TTTAGAGGCTGTGAACCAAGAT | 57.359 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
6685 | 9609 | 1.834263 | ACGAAGAGGAGGAGGATTTGG | 59.166 | 52.381 | 0.00 | 0.00 | 0.00 | 3.28 |
6771 | 9695 | 4.681978 | GCCAACGAGCTGACGGGT | 62.682 | 66.667 | 0.00 | 0.00 | 37.61 | 5.28 |
6795 | 9719 | 1.139058 | GCCCTGGACGACTATGACATT | 59.861 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
6852 | 9780 | 1.220477 | GAGCCTTCTGGAGTCTGCC | 59.780 | 63.158 | 0.00 | 0.00 | 34.57 | 4.85 |
6853 | 9781 | 2.125350 | GCCTTCTGGAGTCTGCCG | 60.125 | 66.667 | 0.00 | 0.00 | 34.57 | 5.69 |
6854 | 9782 | 2.125350 | CCTTCTGGAGTCTGCCGC | 60.125 | 66.667 | 0.00 | 0.00 | 34.57 | 6.53 |
6881 | 9818 | 1.280133 | TGCTGCTGGTAGCTCTTGATT | 59.720 | 47.619 | 11.49 | 0.00 | 42.97 | 2.57 |
6889 | 9826 | 3.261643 | TGGTAGCTCTTGATTTGCAGAGA | 59.738 | 43.478 | 2.78 | 0.00 | 0.00 | 3.10 |
7024 | 11364 | 0.315869 | CGTGACACGTGAAAACCTGC | 60.316 | 55.000 | 25.01 | 2.40 | 36.74 | 4.85 |
7068 | 11408 | 2.602257 | TTATGGACCGCATCTCACTG | 57.398 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
7188 | 11541 | 4.559862 | AGCTGCTCAATAGGTTTACTGT | 57.440 | 40.909 | 0.00 | 0.00 | 0.00 | 3.55 |
7285 | 11669 | 2.230992 | AGCGCATGTGCTAAAAATCCAA | 59.769 | 40.909 | 31.53 | 0.00 | 45.14 | 3.53 |
7343 | 11920 | 2.299993 | ACTCACATACATGGAGCACG | 57.700 | 50.000 | 0.00 | 0.00 | 32.10 | 5.34 |
7357 | 11934 | 4.258702 | GGAGCACGTCCATATGTAATCT | 57.741 | 45.455 | 1.24 | 0.00 | 46.10 | 2.40 |
7358 | 11935 | 4.238514 | GGAGCACGTCCATATGTAATCTC | 58.761 | 47.826 | 1.24 | 1.06 | 46.10 | 2.75 |
7415 | 12038 | 3.339253 | GCCCAAGCTCCAAAATGAATT | 57.661 | 42.857 | 0.00 | 0.00 | 35.50 | 2.17 |
7438 | 12061 | 9.643693 | AATTACCTTTTGAAATCATAGTGCAAG | 57.356 | 29.630 | 0.00 | 0.00 | 0.00 | 4.01 |
7439 | 12062 | 5.473039 | ACCTTTTGAAATCATAGTGCAAGC | 58.527 | 37.500 | 0.00 | 0.00 | 0.00 | 4.01 |
7440 | 12063 | 5.010922 | ACCTTTTGAAATCATAGTGCAAGCA | 59.989 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
7441 | 12064 | 6.103997 | CCTTTTGAAATCATAGTGCAAGCAT | 58.896 | 36.000 | 0.00 | 0.00 | 0.00 | 3.79 |
7442 | 12065 | 6.035650 | CCTTTTGAAATCATAGTGCAAGCATG | 59.964 | 38.462 | 0.00 | 0.00 | 0.00 | 4.06 |
7443 | 12066 | 4.642445 | TGAAATCATAGTGCAAGCATGG | 57.358 | 40.909 | 0.00 | 0.00 | 0.00 | 3.66 |
7444 | 12067 | 3.382227 | TGAAATCATAGTGCAAGCATGGG | 59.618 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
7445 | 12068 | 2.742428 | ATCATAGTGCAAGCATGGGT | 57.258 | 45.000 | 0.00 | 0.00 | 0.00 | 4.51 |
7446 | 12069 | 3.862877 | ATCATAGTGCAAGCATGGGTA | 57.137 | 42.857 | 0.00 | 0.00 | 0.00 | 3.69 |
7447 | 12070 | 3.198409 | TCATAGTGCAAGCATGGGTAG | 57.802 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
7448 | 12071 | 2.771372 | TCATAGTGCAAGCATGGGTAGA | 59.229 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
7449 | 12072 | 3.199727 | TCATAGTGCAAGCATGGGTAGAA | 59.800 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
7450 | 12073 | 2.584835 | AGTGCAAGCATGGGTAGAAA | 57.415 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7451 | 12074 | 3.091633 | AGTGCAAGCATGGGTAGAAAT | 57.908 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
7452 | 12075 | 3.019564 | AGTGCAAGCATGGGTAGAAATC | 58.980 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
7453 | 12076 | 2.016318 | TGCAAGCATGGGTAGAAATCG | 58.984 | 47.619 | 0.00 | 0.00 | 0.00 | 3.34 |
7454 | 12077 | 2.017049 | GCAAGCATGGGTAGAAATCGT | 58.983 | 47.619 | 0.00 | 0.00 | 0.00 | 3.73 |
7455 | 12078 | 2.032178 | GCAAGCATGGGTAGAAATCGTC | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
7456 | 12079 | 3.270027 | CAAGCATGGGTAGAAATCGTCA | 58.730 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
7457 | 12080 | 2.906354 | AGCATGGGTAGAAATCGTCAC | 58.094 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
7458 | 12081 | 2.501723 | AGCATGGGTAGAAATCGTCACT | 59.498 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
7459 | 12082 | 3.055094 | AGCATGGGTAGAAATCGTCACTT | 60.055 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
7460 | 12083 | 3.689649 | GCATGGGTAGAAATCGTCACTTT | 59.310 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
7461 | 12084 | 4.156008 | GCATGGGTAGAAATCGTCACTTTT | 59.844 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
7462 | 12085 | 5.631026 | CATGGGTAGAAATCGTCACTTTTG | 58.369 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
7463 | 12086 | 4.963373 | TGGGTAGAAATCGTCACTTTTGA | 58.037 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
7464 | 12087 | 5.369833 | TGGGTAGAAATCGTCACTTTTGAA | 58.630 | 37.500 | 0.00 | 0.00 | 31.90 | 2.69 |
7465 | 12088 | 5.823570 | TGGGTAGAAATCGTCACTTTTGAAA | 59.176 | 36.000 | 0.00 | 0.00 | 31.90 | 2.69 |
7466 | 12089 | 6.319152 | TGGGTAGAAATCGTCACTTTTGAAAA | 59.681 | 34.615 | 0.00 | 0.00 | 31.90 | 2.29 |
7467 | 12090 | 7.013846 | TGGGTAGAAATCGTCACTTTTGAAAAT | 59.986 | 33.333 | 0.00 | 0.00 | 31.90 | 1.82 |
7468 | 12091 | 7.865889 | GGGTAGAAATCGTCACTTTTGAAAATT | 59.134 | 33.333 | 0.00 | 0.00 | 31.90 | 1.82 |
7469 | 12092 | 9.244799 | GGTAGAAATCGTCACTTTTGAAAATTT | 57.755 | 29.630 | 0.00 | 0.00 | 33.72 | 1.82 |
7472 | 12095 | 9.796120 | AGAAATCGTCACTTTTGAAAATTTACA | 57.204 | 25.926 | 0.00 | 0.00 | 32.31 | 2.41 |
7475 | 12098 | 9.743057 | AATCGTCACTTTTGAAAATTTACATGA | 57.257 | 25.926 | 0.00 | 0.00 | 31.90 | 3.07 |
7476 | 12099 | 9.743057 | ATCGTCACTTTTGAAAATTTACATGAA | 57.257 | 25.926 | 0.00 | 0.00 | 31.90 | 2.57 |
7477 | 12100 | 9.743057 | TCGTCACTTTTGAAAATTTACATGAAT | 57.257 | 25.926 | 0.00 | 0.00 | 31.90 | 2.57 |
7496 | 12119 | 9.439500 | ACATGAATTACCTTTTGAAAATCCATG | 57.561 | 29.630 | 0.00 | 0.00 | 33.52 | 3.66 |
7497 | 12120 | 9.656040 | CATGAATTACCTTTTGAAAATCCATGA | 57.344 | 29.630 | 0.00 | 0.00 | 0.00 | 3.07 |
7503 | 12126 | 9.844257 | TTACCTTTTGAAAATCCATGAATTTGT | 57.156 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
7504 | 12127 | 8.750515 | ACCTTTTGAAAATCCATGAATTTGTT | 57.249 | 26.923 | 0.00 | 0.00 | 0.00 | 2.83 |
7505 | 12128 | 9.187996 | ACCTTTTGAAAATCCATGAATTTGTTT | 57.812 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
7515 | 12138 | 9.558396 | AATCCATGAATTTGTTTTTGTATGTGT | 57.442 | 25.926 | 0.00 | 0.00 | 0.00 | 3.72 |
7516 | 12139 | 8.362860 | TCCATGAATTTGTTTTTGTATGTGTG | 57.637 | 30.769 | 0.00 | 0.00 | 0.00 | 3.82 |
7517 | 12140 | 7.984050 | TCCATGAATTTGTTTTTGTATGTGTGT | 59.016 | 29.630 | 0.00 | 0.00 | 0.00 | 3.72 |
7518 | 12141 | 8.063038 | CCATGAATTTGTTTTTGTATGTGTGTG | 58.937 | 33.333 | 0.00 | 0.00 | 0.00 | 3.82 |
7519 | 12142 | 8.602328 | CATGAATTTGTTTTTGTATGTGTGTGT | 58.398 | 29.630 | 0.00 | 0.00 | 0.00 | 3.72 |
7520 | 12143 | 7.957615 | TGAATTTGTTTTTGTATGTGTGTGTG | 58.042 | 30.769 | 0.00 | 0.00 | 0.00 | 3.82 |
7521 | 12144 | 7.600375 | TGAATTTGTTTTTGTATGTGTGTGTGT | 59.400 | 29.630 | 0.00 | 0.00 | 0.00 | 3.72 |
7522 | 12145 | 6.696825 | TTTGTTTTTGTATGTGTGTGTGTG | 57.303 | 33.333 | 0.00 | 0.00 | 0.00 | 3.82 |
7523 | 12146 | 5.378292 | TGTTTTTGTATGTGTGTGTGTGT | 57.622 | 34.783 | 0.00 | 0.00 | 0.00 | 3.72 |
7524 | 12147 | 5.157067 | TGTTTTTGTATGTGTGTGTGTGTG | 58.843 | 37.500 | 0.00 | 0.00 | 0.00 | 3.82 |
7525 | 12148 | 5.157781 | GTTTTTGTATGTGTGTGTGTGTGT | 58.842 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
7526 | 12149 | 4.348198 | TTTGTATGTGTGTGTGTGTGTG | 57.652 | 40.909 | 0.00 | 0.00 | 0.00 | 3.82 |
7527 | 12150 | 2.979240 | TGTATGTGTGTGTGTGTGTGT | 58.021 | 42.857 | 0.00 | 0.00 | 0.00 | 3.72 |
7528 | 12151 | 2.675348 | TGTATGTGTGTGTGTGTGTGTG | 59.325 | 45.455 | 0.00 | 0.00 | 0.00 | 3.82 |
7529 | 12152 | 1.819928 | ATGTGTGTGTGTGTGTGTGT | 58.180 | 45.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7530 | 12153 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7531 | 12154 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7532 | 12155 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7533 | 12156 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7534 | 12157 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7535 | 12158 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7536 | 12159 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7537 | 12160 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7538 | 12161 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7539 | 12162 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7540 | 12163 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7541 | 12164 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7542 | 12165 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7543 | 12166 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7544 | 12167 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7545 | 12168 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7546 | 12169 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7547 | 12170 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7548 | 12171 | 0.871057 | TGTGTGTGTGTGTGTGTGTG | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7549 | 12172 | 0.871722 | GTGTGTGTGTGTGTGTGTGT | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7550 | 12173 | 1.265635 | GTGTGTGTGTGTGTGTGTGTT | 59.734 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
7551 | 12174 | 1.533299 | TGTGTGTGTGTGTGTGTGTTC | 59.467 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
7552 | 12175 | 1.533299 | GTGTGTGTGTGTGTGTGTTCA | 59.467 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
7553 | 12176 | 1.533299 | TGTGTGTGTGTGTGTGTTCAC | 59.467 | 47.619 | 0.00 | 0.00 | 44.08 | 3.18 |
7569 | 12192 | 8.324163 | GTGTGTTCACATCTTAAATTACTCCT | 57.676 | 34.615 | 8.87 | 0.00 | 43.37 | 3.69 |
7570 | 12193 | 9.431887 | GTGTGTTCACATCTTAAATTACTCCTA | 57.568 | 33.333 | 8.87 | 0.00 | 43.37 | 2.94 |
7596 | 12219 | 8.795786 | TGAAAATTTACAAACATGTAGAGCAC | 57.204 | 30.769 | 0.00 | 0.00 | 0.00 | 4.40 |
7597 | 12220 | 8.409371 | TGAAAATTTACAAACATGTAGAGCACA | 58.591 | 29.630 | 0.00 | 0.00 | 42.69 | 4.57 |
7599 | 12222 | 8.970691 | AAATTTACAAACATGTAGAGCACATC | 57.029 | 30.769 | 0.00 | 0.00 | 44.99 | 3.06 |
7600 | 12223 | 6.494893 | TTTACAAACATGTAGAGCACATCC | 57.505 | 37.500 | 0.00 | 0.00 | 44.99 | 3.51 |
7601 | 12224 | 4.019792 | ACAAACATGTAGAGCACATCCA | 57.980 | 40.909 | 0.00 | 0.00 | 44.99 | 3.41 |
7602 | 12225 | 4.592942 | ACAAACATGTAGAGCACATCCAT | 58.407 | 39.130 | 0.00 | 0.00 | 44.99 | 3.41 |
7603 | 12226 | 5.744171 | ACAAACATGTAGAGCACATCCATA | 58.256 | 37.500 | 0.00 | 0.00 | 44.99 | 2.74 |
7604 | 12227 | 6.359804 | ACAAACATGTAGAGCACATCCATAT | 58.640 | 36.000 | 0.00 | 0.00 | 44.99 | 1.78 |
7605 | 12228 | 6.261603 | ACAAACATGTAGAGCACATCCATATG | 59.738 | 38.462 | 0.00 | 0.00 | 44.99 | 1.78 |
7606 | 12229 | 5.557576 | ACATGTAGAGCACATCCATATGT | 57.442 | 39.130 | 0.00 | 0.00 | 44.99 | 2.29 |
7607 | 12230 | 6.670695 | ACATGTAGAGCACATCCATATGTA | 57.329 | 37.500 | 0.00 | 0.00 | 44.99 | 2.29 |
7608 | 12231 | 6.459066 | ACATGTAGAGCACATCCATATGTAC | 58.541 | 40.000 | 0.00 | 0.00 | 44.99 | 2.90 |
7609 | 12232 | 6.041979 | ACATGTAGAGCACATCCATATGTACA | 59.958 | 38.462 | 0.00 | 0.00 | 44.99 | 2.90 |
7610 | 12233 | 6.670695 | TGTAGAGCACATCCATATGTACAT | 57.329 | 37.500 | 13.93 | 13.93 | 44.70 | 2.29 |
7611 | 12234 | 6.458210 | TGTAGAGCACATCCATATGTACATG | 58.542 | 40.000 | 18.81 | 3.94 | 44.70 | 3.21 |
7612 | 12235 | 5.557576 | AGAGCACATCCATATGTACATGT | 57.442 | 39.130 | 18.81 | 9.13 | 44.70 | 3.21 |
7613 | 12236 | 6.670695 | AGAGCACATCCATATGTACATGTA | 57.329 | 37.500 | 18.81 | 0.08 | 44.70 | 2.29 |
7614 | 12237 | 6.695429 | AGAGCACATCCATATGTACATGTAG | 58.305 | 40.000 | 18.81 | 5.12 | 44.70 | 2.74 |
7615 | 12238 | 6.494835 | AGAGCACATCCATATGTACATGTAGA | 59.505 | 38.462 | 18.81 | 10.78 | 44.70 | 2.59 |
7616 | 12239 | 7.179872 | AGAGCACATCCATATGTACATGTAGAT | 59.820 | 37.037 | 18.81 | 18.47 | 44.70 | 1.98 |
7617 | 12240 | 7.683578 | AGCACATCCATATGTACATGTAGATT | 58.316 | 34.615 | 19.49 | 6.39 | 44.70 | 2.40 |
7618 | 12241 | 8.159447 | AGCACATCCATATGTACATGTAGATTT | 58.841 | 33.333 | 19.49 | 10.07 | 44.70 | 2.17 |
7619 | 12242 | 8.786898 | GCACATCCATATGTACATGTAGATTTT | 58.213 | 33.333 | 19.49 | 6.58 | 44.70 | 1.82 |
7660 | 12283 | 9.780413 | TTTTTCTTCGGAATTTTCAAAAATTGG | 57.220 | 25.926 | 16.03 | 9.22 | 45.70 | 3.16 |
7661 | 12284 | 7.489574 | TTCTTCGGAATTTTCAAAAATTGGG | 57.510 | 32.000 | 16.03 | 8.94 | 45.70 | 4.12 |
7662 | 12285 | 5.468409 | TCTTCGGAATTTTCAAAAATTGGGC | 59.532 | 36.000 | 16.03 | 4.50 | 45.70 | 5.36 |
7663 | 12286 | 4.967036 | TCGGAATTTTCAAAAATTGGGCT | 58.033 | 34.783 | 16.03 | 0.00 | 45.70 | 5.19 |
7664 | 12287 | 4.994217 | TCGGAATTTTCAAAAATTGGGCTC | 59.006 | 37.500 | 16.03 | 3.95 | 45.70 | 4.70 |
7665 | 12288 | 4.154015 | CGGAATTTTCAAAAATTGGGCTCC | 59.846 | 41.667 | 16.03 | 10.56 | 45.70 | 4.70 |
7666 | 12289 | 5.069318 | GGAATTTTCAAAAATTGGGCTCCA | 58.931 | 37.500 | 16.03 | 0.00 | 45.70 | 3.86 |
7667 | 12290 | 5.711506 | GGAATTTTCAAAAATTGGGCTCCAT | 59.288 | 36.000 | 16.03 | 0.00 | 45.70 | 3.41 |
7668 | 12291 | 6.209192 | GGAATTTTCAAAAATTGGGCTCCATT | 59.791 | 34.615 | 16.03 | 0.00 | 45.70 | 3.16 |
7669 | 12292 | 6.578163 | ATTTTCAAAAATTGGGCTCCATTG | 57.422 | 33.333 | 0.00 | 0.00 | 35.16 | 2.82 |
7670 | 12293 | 4.970860 | TTCAAAAATTGGGCTCCATTGA | 57.029 | 36.364 | 4.72 | 4.72 | 30.12 | 2.57 |
7671 | 12294 | 4.540359 | TCAAAAATTGGGCTCCATTGAG | 57.460 | 40.909 | 4.72 | 0.00 | 41.84 | 3.02 |
7672 | 12295 | 3.261390 | TCAAAAATTGGGCTCCATTGAGG | 59.739 | 43.478 | 0.00 | 0.00 | 39.14 | 3.86 |
7673 | 12296 | 2.629017 | AAATTGGGCTCCATTGAGGT | 57.371 | 45.000 | 0.00 | 0.00 | 39.14 | 3.85 |
7674 | 12297 | 2.629017 | AATTGGGCTCCATTGAGGTT | 57.371 | 45.000 | 0.00 | 0.00 | 39.14 | 3.50 |
7675 | 12298 | 1.856629 | ATTGGGCTCCATTGAGGTTG | 58.143 | 50.000 | 0.00 | 0.00 | 39.14 | 3.77 |
7676 | 12299 | 0.251742 | TTGGGCTCCATTGAGGTTGG | 60.252 | 55.000 | 0.00 | 0.00 | 39.14 | 3.77 |
7677 | 12300 | 1.139498 | TGGGCTCCATTGAGGTTGGA | 61.139 | 55.000 | 0.00 | 0.00 | 40.96 | 3.53 |
7681 | 12304 | 1.691219 | TCCATTGAGGTTGGAGCCC | 59.309 | 57.895 | 0.00 | 0.00 | 38.35 | 5.19 |
7682 | 12305 | 1.139498 | TCCATTGAGGTTGGAGCCCA | 61.139 | 55.000 | 0.00 | 0.00 | 38.35 | 5.36 |
7683 | 12306 | 0.251742 | CCATTGAGGTTGGAGCCCAA | 60.252 | 55.000 | 2.84 | 2.84 | 41.69 | 4.12 |
7684 | 12307 | 1.180029 | CATTGAGGTTGGAGCCCAAG | 58.820 | 55.000 | 6.88 | 0.00 | 44.82 | 3.61 |
7696 | 12319 | 2.669878 | GCCCAAGCTCCAAAATGGA | 58.330 | 52.632 | 1.24 | 0.00 | 45.98 | 3.41 |
7709 | 12332 | 6.491714 | TCCAAAATGGATCACCTTTTGAAA | 57.508 | 33.333 | 19.79 | 10.35 | 42.67 | 2.69 |
7710 | 12333 | 7.077050 | TCCAAAATGGATCACCTTTTGAAAT | 57.923 | 32.000 | 19.79 | 0.00 | 42.67 | 2.17 |
7711 | 12334 | 7.160726 | TCCAAAATGGATCACCTTTTGAAATC | 58.839 | 34.615 | 19.79 | 0.00 | 42.67 | 2.17 |
7712 | 12335 | 6.935771 | CCAAAATGGATCACCTTTTGAAATCA | 59.064 | 34.615 | 19.79 | 0.00 | 40.96 | 2.57 |
7713 | 12336 | 7.608761 | CCAAAATGGATCACCTTTTGAAATCAT | 59.391 | 33.333 | 19.79 | 0.00 | 40.96 | 2.45 |
7714 | 12337 | 9.656040 | CAAAATGGATCACCTTTTGAAATCATA | 57.344 | 29.630 | 15.86 | 0.00 | 41.31 | 2.15 |
7715 | 12338 | 9.880157 | AAAATGGATCACCTTTTGAAATCATAG | 57.120 | 29.630 | 0.00 | 0.00 | 40.88 | 2.23 |
7716 | 12339 | 8.599624 | AATGGATCACCTTTTGAAATCATAGT | 57.400 | 30.769 | 0.00 | 0.00 | 37.92 | 2.12 |
7717 | 12340 | 7.630242 | TGGATCACCTTTTGAAATCATAGTC | 57.370 | 36.000 | 0.00 | 0.00 | 37.92 | 2.59 |
7718 | 12341 | 7.405292 | TGGATCACCTTTTGAAATCATAGTCT | 58.595 | 34.615 | 0.00 | 0.00 | 37.92 | 3.24 |
7719 | 12342 | 8.548025 | TGGATCACCTTTTGAAATCATAGTCTA | 58.452 | 33.333 | 0.00 | 0.00 | 37.92 | 2.59 |
7720 | 12343 | 9.396022 | GGATCACCTTTTGAAATCATAGTCTAA | 57.604 | 33.333 | 0.00 | 0.00 | 37.92 | 2.10 |
7785 | 12411 | 1.615392 | AGTTGTTCAAGGGAGCATTGC | 59.385 | 47.619 | 0.00 | 0.00 | 34.05 | 3.56 |
7786 | 12412 | 0.597568 | TTGTTCAAGGGAGCATTGCG | 59.402 | 50.000 | 2.38 | 0.00 | 34.05 | 4.85 |
7795 | 12421 | 1.019278 | GGAGCATTGCGGACGAGAAA | 61.019 | 55.000 | 2.38 | 0.00 | 0.00 | 2.52 |
7832 | 12459 | 6.187682 | CCAGGATAAATAGTTTGAGGTTGGT | 58.812 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
7837 | 12464 | 7.066645 | GGATAAATAGTTTGAGGTTGGTACACC | 59.933 | 40.741 | 0.00 | 0.00 | 39.29 | 4.16 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
150 | 151 | 6.830873 | AAAACCTGATGAGGAGAAGAATTG | 57.169 | 37.500 | 4.75 | 0.00 | 42.93 | 2.32 |
203 | 205 | 5.046878 | TCAGGAGAGGCGTCATTAAGTTTAA | 60.047 | 40.000 | 9.41 | 0.00 | 0.00 | 1.52 |
216 | 218 | 2.202987 | GCACCATCAGGAGAGGCG | 60.203 | 66.667 | 0.00 | 0.00 | 38.69 | 5.52 |
260 | 262 | 3.314080 | CGGCAAAAGAGTGGAGTTTGTAA | 59.686 | 43.478 | 0.00 | 0.00 | 35.22 | 2.41 |
336 | 338 | 7.347508 | TCTACATTTAAAAGAAGCGTCAGAC | 57.652 | 36.000 | 1.61 | 0.00 | 0.00 | 3.51 |
357 | 360 | 3.383825 | GCGTTAGACCTGGGATCTTTCTA | 59.616 | 47.826 | 0.00 | 0.00 | 0.00 | 2.10 |
359 | 362 | 2.093658 | TGCGTTAGACCTGGGATCTTTC | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
559 | 3114 | 4.122776 | GCCAAAGAGAGATTATCAGCGAA | 58.877 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
562 | 3117 | 6.293353 | GCTTTAGCCAAAGAGAGATTATCAGC | 60.293 | 42.308 | 8.93 | 0.00 | 43.32 | 4.26 |
606 | 3161 | 2.827322 | CCAAGGAATCACATCAGCCAAA | 59.173 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
617 | 3172 | 4.507710 | CTTTCTGATCGACCAAGGAATCA | 58.492 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
687 | 3242 | 9.696572 | CCATTGATTTCTCTGGATATATGGAAT | 57.303 | 33.333 | 0.00 | 0.00 | 28.84 | 3.01 |
705 | 3260 | 4.957954 | ACATTGTGGTCTATGCCATTGATT | 59.042 | 37.500 | 0.00 | 0.00 | 41.08 | 2.57 |
719 | 3274 | 2.573462 | ACCTGATGAGCTACATTGTGGT | 59.427 | 45.455 | 0.00 | 0.33 | 39.56 | 4.16 |
787 | 3342 | 3.327757 | ACAGGGCAAGTTGAGTGAGAATA | 59.672 | 43.478 | 7.16 | 0.00 | 0.00 | 1.75 |
820 | 3376 | 3.508793 | CCCTGAATGTTGCAAGAAGACAT | 59.491 | 43.478 | 0.00 | 0.00 | 35.65 | 3.06 |
928 | 3488 | 6.540914 | TCTTCGGCGTGAGGATTTTATTTTAT | 59.459 | 34.615 | 6.85 | 0.00 | 0.00 | 1.40 |
929 | 3489 | 5.875910 | TCTTCGGCGTGAGGATTTTATTTTA | 59.124 | 36.000 | 6.85 | 0.00 | 0.00 | 1.52 |
930 | 3490 | 4.698304 | TCTTCGGCGTGAGGATTTTATTTT | 59.302 | 37.500 | 6.85 | 0.00 | 0.00 | 1.82 |
931 | 3491 | 4.094442 | GTCTTCGGCGTGAGGATTTTATTT | 59.906 | 41.667 | 6.85 | 0.00 | 34.90 | 1.40 |
932 | 3492 | 3.621715 | GTCTTCGGCGTGAGGATTTTATT | 59.378 | 43.478 | 6.85 | 0.00 | 34.90 | 1.40 |
933 | 3493 | 3.195661 | GTCTTCGGCGTGAGGATTTTAT | 58.804 | 45.455 | 6.85 | 0.00 | 34.90 | 1.40 |
934 | 3494 | 2.613691 | GTCTTCGGCGTGAGGATTTTA | 58.386 | 47.619 | 6.85 | 0.00 | 34.90 | 1.52 |
935 | 3495 | 1.439679 | GTCTTCGGCGTGAGGATTTT | 58.560 | 50.000 | 6.85 | 0.00 | 34.90 | 1.82 |
936 | 3496 | 0.391263 | GGTCTTCGGCGTGAGGATTT | 60.391 | 55.000 | 6.85 | 0.00 | 34.90 | 2.17 |
964 | 3524 | 5.903810 | AGTCGGTTTTATGTAGGACTCATC | 58.096 | 41.667 | 0.00 | 0.00 | 29.30 | 2.92 |
966 | 3526 | 5.320549 | GAGTCGGTTTTATGTAGGACTCA | 57.679 | 43.478 | 12.61 | 0.00 | 45.90 | 3.41 |
991 | 3553 | 5.637006 | TGGGATTGAAACATAAAACGAGG | 57.363 | 39.130 | 0.00 | 0.00 | 0.00 | 4.63 |
1000 | 3562 | 5.512921 | GGGTTTGTTGATGGGATTGAAACAT | 60.513 | 40.000 | 0.00 | 0.00 | 31.34 | 2.71 |
1005 | 3567 | 2.158249 | TGGGGTTTGTTGATGGGATTGA | 60.158 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
1033 | 3597 | 2.553466 | CGAGTTGTGGGGGATTTTGGTA | 60.553 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
1422 | 3989 | 4.200283 | GAGTGCTCCTCCTCCGCG | 62.200 | 72.222 | 0.00 | 0.00 | 33.79 | 6.46 |
1502 | 4070 | 6.197168 | AGCAGGAATCTGGAAATCCAAAATA | 58.803 | 36.000 | 3.35 | 0.00 | 46.97 | 1.40 |
1503 | 4071 | 5.028131 | AGCAGGAATCTGGAAATCCAAAAT | 58.972 | 37.500 | 3.35 | 0.00 | 46.97 | 1.82 |
1516 | 4084 | 1.283321 | GGGGAAACAGAGCAGGAATCT | 59.717 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
1523 | 4091 | 2.306847 | GAAAACAGGGGAAACAGAGCA | 58.693 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
1524 | 4092 | 1.266989 | CGAAAACAGGGGAAACAGAGC | 59.733 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
1525 | 4093 | 1.880027 | CCGAAAACAGGGGAAACAGAG | 59.120 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
1526 | 4094 | 1.975660 | CCGAAAACAGGGGAAACAGA | 58.024 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1527 | 4095 | 0.313987 | GCCGAAAACAGGGGAAACAG | 59.686 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1529 | 4097 | 1.284715 | CGCCGAAAACAGGGGAAAC | 59.715 | 57.895 | 0.00 | 0.00 | 43.49 | 2.78 |
1531 | 4099 | 2.281900 | CCGCCGAAAACAGGGGAA | 60.282 | 61.111 | 0.69 | 0.00 | 43.49 | 3.97 |
1607 | 4466 | 6.959639 | ATAGAATAAAACAATGGCATCGGT | 57.040 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
1708 | 4572 | 1.279271 | ACACATCCTGTTGACTAGGGC | 59.721 | 52.381 | 0.00 | 0.00 | 35.96 | 5.19 |
1853 | 4717 | 4.628074 | TGTGTTCTTCTTACCGAGAAAGG | 58.372 | 43.478 | 0.00 | 0.00 | 43.56 | 3.11 |
1861 | 4725 | 6.929606 | AGACTGTACATTGTGTTCTTCTTACC | 59.070 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
1879 | 4746 | 8.029522 | GTGAGTTTCTGAATCATACAGACTGTA | 58.970 | 37.037 | 17.43 | 17.43 | 42.84 | 2.74 |
1971 | 4838 | 2.053627 | CTTTCAATCAAGGCACGCAAC | 58.946 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
2029 | 4896 | 9.378551 | CACCTATCTTGTGCTACTAACATTTTA | 57.621 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
2048 | 4915 | 5.783111 | ACAAACATTTGCTTTCCACCTATC | 58.217 | 37.500 | 4.25 | 0.00 | 41.79 | 2.08 |
2256 | 5124 | 9.953825 | GAATAGTACAAACTACATGAGAAAACG | 57.046 | 33.333 | 0.00 | 0.00 | 40.98 | 3.60 |
2267 | 5135 | 8.759641 | CATGATGAGCTGAATAGTACAAACTAC | 58.240 | 37.037 | 0.00 | 0.00 | 40.98 | 2.73 |
2410 | 5279 | 1.890876 | AACAATCACGCAAGGCAGTA | 58.109 | 45.000 | 0.00 | 0.00 | 46.39 | 2.74 |
2411 | 5280 | 1.032014 | AAACAATCACGCAAGGCAGT | 58.968 | 45.000 | 0.00 | 0.00 | 46.39 | 4.40 |
2419 | 5288 | 2.030274 | AGTAGGGCAAAAACAATCACGC | 60.030 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
2461 | 5330 | 8.367911 | CAGATGGGTCAGTAATTATACAGCTAA | 58.632 | 37.037 | 0.00 | 0.00 | 34.29 | 3.09 |
2526 | 5395 | 4.631813 | ACGATTCAAGTTACCTCAATGAGC | 59.368 | 41.667 | 4.40 | 0.00 | 0.00 | 4.26 |
2767 | 5636 | 1.134670 | GCCTGGAGTAATCTGAAGCGT | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 5.07 |
2903 | 5776 | 9.273016 | TCTAAATGCAGCAATTAGTTATCTACC | 57.727 | 33.333 | 23.77 | 0.00 | 31.18 | 3.18 |
3316 | 6190 | 5.661312 | AGCACTGATATGGTACTAAGGTCAA | 59.339 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3462 | 6336 | 8.815141 | AGAGATCAACAGAAGATTGAATATCG | 57.185 | 34.615 | 0.00 | 0.00 | 39.43 | 2.92 |
3838 | 6712 | 3.193267 | GTGCAATAAAGCCAGATTGGTCA | 59.807 | 43.478 | 0.00 | 0.00 | 40.46 | 4.02 |
4333 | 7207 | 6.015180 | ACATCATGCACCAACAATAAAACTCT | 60.015 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
4336 | 7210 | 6.347563 | CCAACATCATGCACCAACAATAAAAC | 60.348 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
4353 | 7227 | 2.955660 | GGTTTCACCTGTTCCAACATCA | 59.044 | 45.455 | 0.00 | 0.00 | 38.41 | 3.07 |
4481 | 7355 | 1.477700 | ACCATGCTGCGCAACATATTT | 59.522 | 42.857 | 24.66 | 10.06 | 43.62 | 1.40 |
4602 | 7488 | 4.396166 | GTGGTATATGACTGCCATATTGCC | 59.604 | 45.833 | 1.76 | 6.17 | 43.97 | 4.52 |
4940 | 7827 | 2.354109 | AGCTCTGACGTACATGTGTG | 57.646 | 50.000 | 9.11 | 2.88 | 0.00 | 3.82 |
4941 | 7828 | 2.159366 | GCTAGCTCTGACGTACATGTGT | 60.159 | 50.000 | 9.11 | 0.00 | 0.00 | 3.72 |
5175 | 8062 | 4.254709 | ACGCCTGCAAGCAGACCA | 62.255 | 61.111 | 22.76 | 0.00 | 46.30 | 4.02 |
5230 | 8117 | 2.482494 | CAATCTACTGGTTCCCCTCCT | 58.518 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
5232 | 8119 | 1.490910 | CCCAATCTACTGGTTCCCCTC | 59.509 | 57.143 | 0.00 | 0.00 | 34.33 | 4.30 |
5272 | 8159 | 3.205282 | CCATAGGTTTCATCCTCCCCTTT | 59.795 | 47.826 | 0.00 | 0.00 | 38.86 | 3.11 |
5361 | 8248 | 6.109359 | CCATATAAGTAGGACCTTGCATAGC | 58.891 | 44.000 | 0.00 | 0.00 | 0.00 | 2.97 |
5363 | 8250 | 8.730093 | TTACCATATAAGTAGGACCTTGCATA | 57.270 | 34.615 | 0.00 | 0.00 | 0.00 | 3.14 |
5539 | 8431 | 3.486708 | CGCTATGTGTCTGACTCTCTGTC | 60.487 | 52.174 | 9.51 | 0.00 | 45.54 | 3.51 |
5540 | 8432 | 2.421775 | CGCTATGTGTCTGACTCTCTGT | 59.578 | 50.000 | 9.51 | 0.00 | 0.00 | 3.41 |
5541 | 8433 | 2.421775 | ACGCTATGTGTCTGACTCTCTG | 59.578 | 50.000 | 9.51 | 1.73 | 0.00 | 3.35 |
5542 | 8434 | 2.421775 | CACGCTATGTGTCTGACTCTCT | 59.578 | 50.000 | 9.51 | 0.83 | 43.88 | 3.10 |
5543 | 8435 | 2.791567 | CACGCTATGTGTCTGACTCTC | 58.208 | 52.381 | 9.51 | 0.91 | 43.88 | 3.20 |
5544 | 8436 | 2.929531 | CACGCTATGTGTCTGACTCT | 57.070 | 50.000 | 9.51 | 0.00 | 43.88 | 3.24 |
5788 | 8707 | 1.985159 | ACTGGTGAGAATGCCCACTTA | 59.015 | 47.619 | 0.00 | 0.00 | 33.99 | 2.24 |
5979 | 8898 | 2.847327 | TGGCTGCTAGGAATAGATGC | 57.153 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
6003 | 8922 | 7.924412 | AGACAACTAAAGACACGTCTAAATCAA | 59.076 | 33.333 | 0.00 | 0.00 | 39.39 | 2.57 |
6072 | 8991 | 4.139859 | TCGGTTACAAACAGAAACAGGA | 57.860 | 40.909 | 0.00 | 0.00 | 32.68 | 3.86 |
6272 | 9191 | 9.883142 | AATGACAGAACAAAAGGAAATGTTAAA | 57.117 | 25.926 | 0.00 | 0.00 | 39.73 | 1.52 |
6279 | 9198 | 6.154363 | AGTGGAAATGACAGAACAAAAGGAAA | 59.846 | 34.615 | 0.00 | 0.00 | 0.00 | 3.13 |
6389 | 9310 | 9.516314 | TGTAAGTCTATTTCATCTGTAACGATG | 57.484 | 33.333 | 0.00 | 0.00 | 41.64 | 3.84 |
6395 | 9316 | 7.789831 | AGGGGATGTAAGTCTATTTCATCTGTA | 59.210 | 37.037 | 7.02 | 0.00 | 36.27 | 2.74 |
6396 | 9317 | 6.617371 | AGGGGATGTAAGTCTATTTCATCTGT | 59.383 | 38.462 | 7.02 | 0.00 | 36.27 | 3.41 |
6416 | 9337 | 0.543410 | TGGCAAGACGTAGAAGGGGA | 60.543 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
6501 | 9422 | 3.338250 | GGGATCTGTGGTGGGGCA | 61.338 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
6631 | 9552 | 3.582647 | TGATCTTGGTTCACAGCCTCTAA | 59.417 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
6632 | 9553 | 3.173151 | TGATCTTGGTTCACAGCCTCTA | 58.827 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
6636 | 9557 | 2.485814 | GTCTTGATCTTGGTTCACAGCC | 59.514 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6651 | 9572 | 0.389817 | CTTCGTCGCCCATGTCTTGA | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6685 | 9609 | 2.509561 | GCCCGCTTCTTCCTCGAC | 60.510 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
6771 | 9695 | 0.752658 | CATAGTCGTCCAGGGCATCA | 59.247 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
6795 | 9719 | 1.375396 | CCCTTCATTGGCGACGTCA | 60.375 | 57.895 | 17.16 | 0.00 | 0.00 | 4.35 |
6869 | 9806 | 7.727331 | ATATTCTCTGCAAATCAAGAGCTAC | 57.273 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
7068 | 11408 | 7.886405 | ACAGAAGAAAAGGAACTCGTAATAC | 57.114 | 36.000 | 0.00 | 0.00 | 38.49 | 1.89 |
7188 | 11541 | 2.297033 | GGTTACAACAGAGGACGTGGTA | 59.703 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
7301 | 11692 | 6.816640 | AGTAATTTAAGATGCGAGCTACACAA | 59.183 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
7312 | 11703 | 9.056005 | TCCATGTATGTGAGTAATTTAAGATGC | 57.944 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
7343 | 11920 | 5.012561 | AGCCTCCAAGAGATTACATATGGAC | 59.987 | 44.000 | 7.80 | 0.00 | 33.61 | 4.02 |
7415 | 12038 | 6.208402 | TGCTTGCACTATGATTTCAAAAGGTA | 59.792 | 34.615 | 0.00 | 0.00 | 0.00 | 3.08 |
7438 | 12061 | 2.906354 | AGTGACGATTTCTACCCATGC | 58.094 | 47.619 | 0.00 | 0.00 | 0.00 | 4.06 |
7439 | 12062 | 5.411361 | TCAAAAGTGACGATTTCTACCCATG | 59.589 | 40.000 | 0.00 | 0.00 | 0.00 | 3.66 |
7440 | 12063 | 5.556915 | TCAAAAGTGACGATTTCTACCCAT | 58.443 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
7441 | 12064 | 4.963373 | TCAAAAGTGACGATTTCTACCCA | 58.037 | 39.130 | 0.00 | 0.00 | 0.00 | 4.51 |
7442 | 12065 | 5.934935 | TTCAAAAGTGACGATTTCTACCC | 57.065 | 39.130 | 0.00 | 0.00 | 31.90 | 3.69 |
7443 | 12066 | 8.797266 | AATTTTCAAAAGTGACGATTTCTACC | 57.203 | 30.769 | 0.00 | 0.00 | 31.90 | 3.18 |
7446 | 12069 | 9.796120 | TGTAAATTTTCAAAAGTGACGATTTCT | 57.204 | 25.926 | 0.00 | 0.00 | 33.66 | 2.52 |
7449 | 12072 | 9.743057 | TCATGTAAATTTTCAAAAGTGACGATT | 57.257 | 25.926 | 1.36 | 0.00 | 31.90 | 3.34 |
7450 | 12073 | 9.743057 | TTCATGTAAATTTTCAAAAGTGACGAT | 57.257 | 25.926 | 1.36 | 0.00 | 31.90 | 3.73 |
7451 | 12074 | 9.743057 | ATTCATGTAAATTTTCAAAAGTGACGA | 57.257 | 25.926 | 1.36 | 0.00 | 31.90 | 4.20 |
7470 | 12093 | 9.439500 | CATGGATTTTCAAAAGGTAATTCATGT | 57.561 | 29.630 | 0.00 | 0.00 | 38.39 | 3.21 |
7471 | 12094 | 9.656040 | TCATGGATTTTCAAAAGGTAATTCATG | 57.344 | 29.630 | 0.00 | 0.00 | 41.88 | 3.07 |
7477 | 12100 | 9.844257 | ACAAATTCATGGATTTTCAAAAGGTAA | 57.156 | 25.926 | 9.38 | 0.00 | 0.00 | 2.85 |
7478 | 12101 | 9.844257 | AACAAATTCATGGATTTTCAAAAGGTA | 57.156 | 25.926 | 9.38 | 0.00 | 0.00 | 3.08 |
7479 | 12102 | 8.750515 | AACAAATTCATGGATTTTCAAAAGGT | 57.249 | 26.923 | 9.38 | 0.26 | 0.00 | 3.50 |
7489 | 12112 | 9.558396 | ACACATACAAAAACAAATTCATGGATT | 57.442 | 25.926 | 0.00 | 0.00 | 0.00 | 3.01 |
7490 | 12113 | 8.991026 | CACACATACAAAAACAAATTCATGGAT | 58.009 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
7491 | 12114 | 7.984050 | ACACACATACAAAAACAAATTCATGGA | 59.016 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
7492 | 12115 | 8.063038 | CACACACATACAAAAACAAATTCATGG | 58.937 | 33.333 | 0.00 | 0.00 | 0.00 | 3.66 |
7493 | 12116 | 8.602328 | ACACACACATACAAAAACAAATTCATG | 58.398 | 29.630 | 0.00 | 0.00 | 0.00 | 3.07 |
7494 | 12117 | 8.602328 | CACACACACATACAAAAACAAATTCAT | 58.398 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
7495 | 12118 | 7.600375 | ACACACACACATACAAAAACAAATTCA | 59.400 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
7496 | 12119 | 7.897291 | CACACACACACATACAAAAACAAATTC | 59.103 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
7497 | 12120 | 7.386299 | ACACACACACACATACAAAAACAAATT | 59.614 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
7498 | 12121 | 6.870965 | ACACACACACACATACAAAAACAAAT | 59.129 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
7499 | 12122 | 6.144563 | CACACACACACACATACAAAAACAAA | 59.855 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
7500 | 12123 | 5.631096 | CACACACACACACATACAAAAACAA | 59.369 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
7501 | 12124 | 5.157067 | CACACACACACACATACAAAAACA | 58.843 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
7502 | 12125 | 5.060323 | CACACACACACACACATACAAAAAC | 59.940 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
7503 | 12126 | 5.157067 | CACACACACACACACATACAAAAA | 58.843 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
7504 | 12127 | 4.216472 | ACACACACACACACACATACAAAA | 59.784 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
7505 | 12128 | 3.753797 | ACACACACACACACACATACAAA | 59.246 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
7506 | 12129 | 3.126000 | CACACACACACACACACATACAA | 59.874 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
7507 | 12130 | 2.675348 | CACACACACACACACACATACA | 59.325 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
7508 | 12131 | 2.675844 | ACACACACACACACACACATAC | 59.324 | 45.455 | 0.00 | 0.00 | 0.00 | 2.39 |
7509 | 12132 | 2.675348 | CACACACACACACACACACATA | 59.325 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
7510 | 12133 | 1.468127 | CACACACACACACACACACAT | 59.532 | 47.619 | 0.00 | 0.00 | 0.00 | 3.21 |
7511 | 12134 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7512 | 12135 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7513 | 12136 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7514 | 12137 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7515 | 12138 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7516 | 12139 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7517 | 12140 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7518 | 12141 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7519 | 12142 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7520 | 12143 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7521 | 12144 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7522 | 12145 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7523 | 12146 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7524 | 12147 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7525 | 12148 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7526 | 12149 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7527 | 12150 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7528 | 12151 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7529 | 12152 | 0.871057 | CACACACACACACACACACA | 59.129 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7530 | 12153 | 0.871722 | ACACACACACACACACACAC | 59.128 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7531 | 12154 | 1.533299 | GAACACACACACACACACACA | 59.467 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
7532 | 12155 | 1.533299 | TGAACACACACACACACACAC | 59.467 | 47.619 | 0.00 | 0.00 | 0.00 | 3.82 |
7533 | 12156 | 1.533299 | GTGAACACACACACACACACA | 59.467 | 47.619 | 0.00 | 0.00 | 40.11 | 3.72 |
7534 | 12157 | 1.533299 | TGTGAACACACACACACACAC | 59.467 | 47.619 | 3.39 | 0.00 | 44.29 | 3.82 |
7535 | 12158 | 1.884235 | TGTGAACACACACACACACA | 58.116 | 45.000 | 3.39 | 0.00 | 44.29 | 3.72 |
7542 | 12165 | 8.015658 | GGAGTAATTTAAGATGTGAACACACAC | 58.984 | 37.037 | 9.83 | 7.62 | 45.33 | 3.82 |
7543 | 12166 | 7.936847 | AGGAGTAATTTAAGATGTGAACACACA | 59.063 | 33.333 | 9.83 | 5.55 | 45.05 | 3.72 |
7544 | 12167 | 8.324163 | AGGAGTAATTTAAGATGTGAACACAC | 57.676 | 34.615 | 9.83 | 4.93 | 45.05 | 3.82 |
7570 | 12193 | 9.410556 | GTGCTCTACATGTTTGTAAATTTTCAT | 57.589 | 29.630 | 2.30 | 0.00 | 37.86 | 2.57 |
7571 | 12194 | 8.409371 | TGTGCTCTACATGTTTGTAAATTTTCA | 58.591 | 29.630 | 2.30 | 0.00 | 37.86 | 2.69 |
7572 | 12195 | 8.795786 | TGTGCTCTACATGTTTGTAAATTTTC | 57.204 | 30.769 | 2.30 | 0.00 | 37.86 | 2.29 |
7587 | 12210 | 6.041979 | ACATGTACATATGGATGTGCTCTACA | 59.958 | 38.462 | 8.32 | 3.82 | 46.11 | 2.74 |
7588 | 12211 | 6.459066 | ACATGTACATATGGATGTGCTCTAC | 58.541 | 40.000 | 8.32 | 0.00 | 46.11 | 2.59 |
7589 | 12212 | 6.670695 | ACATGTACATATGGATGTGCTCTA | 57.329 | 37.500 | 8.32 | 0.00 | 46.11 | 2.43 |
7590 | 12213 | 5.557576 | ACATGTACATATGGATGTGCTCT | 57.442 | 39.130 | 8.32 | 0.00 | 46.11 | 4.09 |
7591 | 12214 | 6.691508 | TCTACATGTACATATGGATGTGCTC | 58.308 | 40.000 | 19.69 | 0.00 | 46.11 | 4.26 |
7592 | 12215 | 6.670695 | TCTACATGTACATATGGATGTGCT | 57.329 | 37.500 | 19.69 | 5.69 | 46.11 | 4.40 |
7593 | 12216 | 7.912056 | AATCTACATGTACATATGGATGTGC | 57.088 | 36.000 | 13.06 | 0.32 | 46.11 | 4.57 |
7634 | 12257 | 9.780413 | CCAATTTTTGAAAATTCCGAAGAAAAA | 57.220 | 25.926 | 10.59 | 0.00 | 44.38 | 1.94 |
7635 | 12258 | 8.401709 | CCCAATTTTTGAAAATTCCGAAGAAAA | 58.598 | 29.630 | 10.59 | 0.00 | 44.38 | 2.29 |
7636 | 12259 | 7.467947 | GCCCAATTTTTGAAAATTCCGAAGAAA | 60.468 | 33.333 | 10.59 | 0.00 | 44.38 | 2.52 |
7637 | 12260 | 6.017523 | GCCCAATTTTTGAAAATTCCGAAGAA | 60.018 | 34.615 | 10.59 | 0.00 | 44.38 | 2.52 |
7638 | 12261 | 5.468409 | GCCCAATTTTTGAAAATTCCGAAGA | 59.532 | 36.000 | 10.59 | 0.00 | 44.38 | 2.87 |
7639 | 12262 | 5.469760 | AGCCCAATTTTTGAAAATTCCGAAG | 59.530 | 36.000 | 10.59 | 1.84 | 44.38 | 3.79 |
7640 | 12263 | 5.372373 | AGCCCAATTTTTGAAAATTCCGAA | 58.628 | 33.333 | 10.59 | 0.00 | 44.38 | 4.30 |
7641 | 12264 | 4.967036 | AGCCCAATTTTTGAAAATTCCGA | 58.033 | 34.783 | 10.59 | 0.00 | 44.38 | 4.55 |
7642 | 12265 | 4.154015 | GGAGCCCAATTTTTGAAAATTCCG | 59.846 | 41.667 | 10.59 | 6.12 | 44.38 | 4.30 |
7643 | 12266 | 5.069318 | TGGAGCCCAATTTTTGAAAATTCC | 58.931 | 37.500 | 10.59 | 9.57 | 44.38 | 3.01 |
7644 | 12267 | 6.822667 | ATGGAGCCCAATTTTTGAAAATTC | 57.177 | 33.333 | 10.59 | 2.47 | 44.38 | 2.17 |
7645 | 12268 | 6.776603 | TCAATGGAGCCCAATTTTTGAAAATT | 59.223 | 30.769 | 8.27 | 8.27 | 46.42 | 1.82 |
7646 | 12269 | 6.305411 | TCAATGGAGCCCAATTTTTGAAAAT | 58.695 | 32.000 | 0.00 | 0.00 | 40.15 | 1.82 |
7647 | 12270 | 5.688807 | TCAATGGAGCCCAATTTTTGAAAA | 58.311 | 33.333 | 0.00 | 0.00 | 36.95 | 2.29 |
7648 | 12271 | 5.301835 | TCAATGGAGCCCAATTTTTGAAA | 57.698 | 34.783 | 0.00 | 0.00 | 36.95 | 2.69 |
7649 | 12272 | 4.262981 | CCTCAATGGAGCCCAATTTTTGAA | 60.263 | 41.667 | 0.00 | 0.00 | 39.96 | 2.69 |
7650 | 12273 | 3.261390 | CCTCAATGGAGCCCAATTTTTGA | 59.739 | 43.478 | 0.00 | 3.66 | 39.96 | 2.69 |
7651 | 12274 | 3.008266 | ACCTCAATGGAGCCCAATTTTTG | 59.992 | 43.478 | 0.00 | 0.00 | 39.96 | 2.44 |
7652 | 12275 | 3.250617 | ACCTCAATGGAGCCCAATTTTT | 58.749 | 40.909 | 0.00 | 0.00 | 39.96 | 1.94 |
7653 | 12276 | 2.906568 | ACCTCAATGGAGCCCAATTTT | 58.093 | 42.857 | 0.00 | 0.00 | 39.96 | 1.82 |
7654 | 12277 | 2.568509 | CAACCTCAATGGAGCCCAATTT | 59.431 | 45.455 | 0.00 | 0.00 | 39.96 | 1.82 |
7655 | 12278 | 2.181975 | CAACCTCAATGGAGCCCAATT | 58.818 | 47.619 | 0.00 | 0.00 | 39.96 | 2.32 |
7656 | 12279 | 1.620524 | CCAACCTCAATGGAGCCCAAT | 60.621 | 52.381 | 0.00 | 0.00 | 40.56 | 3.16 |
7657 | 12280 | 0.251742 | CCAACCTCAATGGAGCCCAA | 60.252 | 55.000 | 0.00 | 0.00 | 40.56 | 4.12 |
7658 | 12281 | 1.139498 | TCCAACCTCAATGGAGCCCA | 61.139 | 55.000 | 0.00 | 0.00 | 41.98 | 5.36 |
7659 | 12282 | 1.691219 | TCCAACCTCAATGGAGCCC | 59.309 | 57.895 | 0.00 | 0.00 | 41.98 | 5.19 |
7663 | 12286 | 1.139498 | TGGGCTCCAACCTCAATGGA | 61.139 | 55.000 | 0.00 | 0.00 | 44.58 | 3.41 |
7664 | 12287 | 0.251742 | TTGGGCTCCAACCTCAATGG | 60.252 | 55.000 | 2.84 | 0.00 | 38.75 | 3.16 |
7665 | 12288 | 1.180029 | CTTGGGCTCCAACCTCAATG | 58.820 | 55.000 | 2.84 | 0.00 | 38.75 | 2.82 |
7666 | 12289 | 0.613012 | GCTTGGGCTCCAACCTCAAT | 60.613 | 55.000 | 2.84 | 0.00 | 38.75 | 2.57 |
7667 | 12290 | 1.228552 | GCTTGGGCTCCAACCTCAA | 60.229 | 57.895 | 2.84 | 0.00 | 38.75 | 3.02 |
7668 | 12291 | 2.436109 | GCTTGGGCTCCAACCTCA | 59.564 | 61.111 | 2.84 | 0.00 | 38.75 | 3.86 |
7678 | 12301 | 2.669878 | TCCATTTTGGAGCTTGGGC | 58.330 | 52.632 | 0.10 | 0.00 | 42.67 | 5.36 |
7687 | 12310 | 6.935771 | TGATTTCAAAAGGTGATCCATTTTGG | 59.064 | 34.615 | 22.34 | 11.76 | 39.44 | 3.28 |
7688 | 12311 | 7.966246 | TGATTTCAAAAGGTGATCCATTTTG | 57.034 | 32.000 | 19.33 | 19.33 | 39.81 | 2.44 |
7689 | 12312 | 9.880157 | CTATGATTTCAAAAGGTGATCCATTTT | 57.120 | 29.630 | 0.00 | 0.00 | 35.70 | 1.82 |
7690 | 12313 | 9.039165 | ACTATGATTTCAAAAGGTGATCCATTT | 57.961 | 29.630 | 0.00 | 0.00 | 35.70 | 2.32 |
7691 | 12314 | 8.599624 | ACTATGATTTCAAAAGGTGATCCATT | 57.400 | 30.769 | 0.00 | 0.00 | 35.70 | 3.16 |
7692 | 12315 | 8.057623 | AGACTATGATTTCAAAAGGTGATCCAT | 58.942 | 33.333 | 0.00 | 0.00 | 35.70 | 3.41 |
7693 | 12316 | 7.405292 | AGACTATGATTTCAAAAGGTGATCCA | 58.595 | 34.615 | 0.00 | 0.00 | 35.70 | 3.41 |
7694 | 12317 | 7.872113 | AGACTATGATTTCAAAAGGTGATCC | 57.128 | 36.000 | 0.00 | 0.00 | 35.70 | 3.36 |
7696 | 12319 | 9.178758 | GGTTAGACTATGATTTCAAAAGGTGAT | 57.821 | 33.333 | 0.00 | 0.00 | 35.70 | 3.06 |
7697 | 12320 | 8.160765 | TGGTTAGACTATGATTTCAAAAGGTGA | 58.839 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
7698 | 12321 | 8.335532 | TGGTTAGACTATGATTTCAAAAGGTG | 57.664 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
7699 | 12322 | 8.960591 | CATGGTTAGACTATGATTTCAAAAGGT | 58.039 | 33.333 | 0.00 | 0.00 | 39.12 | 3.50 |
7700 | 12323 | 8.408601 | CCATGGTTAGACTATGATTTCAAAAGG | 58.591 | 37.037 | 2.57 | 0.00 | 39.12 | 3.11 |
7701 | 12324 | 8.408601 | CCCATGGTTAGACTATGATTTCAAAAG | 58.591 | 37.037 | 11.73 | 0.00 | 39.12 | 2.27 |
7702 | 12325 | 7.893302 | ACCCATGGTTAGACTATGATTTCAAAA | 59.107 | 33.333 | 11.73 | 0.00 | 39.12 | 2.44 |
7703 | 12326 | 7.410174 | ACCCATGGTTAGACTATGATTTCAAA | 58.590 | 34.615 | 11.73 | 0.00 | 39.12 | 2.69 |
7704 | 12327 | 6.969043 | ACCCATGGTTAGACTATGATTTCAA | 58.031 | 36.000 | 11.73 | 0.00 | 39.12 | 2.69 |
7705 | 12328 | 6.575244 | ACCCATGGTTAGACTATGATTTCA | 57.425 | 37.500 | 11.73 | 0.00 | 39.12 | 2.69 |
7706 | 12329 | 7.963532 | TCTACCCATGGTTAGACTATGATTTC | 58.036 | 38.462 | 14.65 | 0.00 | 39.12 | 2.17 |
7707 | 12330 | 7.931015 | TCTACCCATGGTTAGACTATGATTT | 57.069 | 36.000 | 14.65 | 0.00 | 39.12 | 2.17 |
7708 | 12331 | 7.931015 | TTCTACCCATGGTTAGACTATGATT | 57.069 | 36.000 | 17.98 | 0.00 | 39.12 | 2.57 |
7709 | 12332 | 7.931015 | TTTCTACCCATGGTTAGACTATGAT | 57.069 | 36.000 | 17.98 | 0.00 | 39.12 | 2.45 |
7710 | 12333 | 7.255836 | CGATTTCTACCCATGGTTAGACTATGA | 60.256 | 40.741 | 17.98 | 1.20 | 39.12 | 2.15 |
7711 | 12334 | 6.868864 | CGATTTCTACCCATGGTTAGACTATG | 59.131 | 42.308 | 17.98 | 6.07 | 36.90 | 2.23 |
7712 | 12335 | 6.553852 | ACGATTTCTACCCATGGTTAGACTAT | 59.446 | 38.462 | 17.98 | 13.96 | 37.09 | 2.12 |
7713 | 12336 | 5.895534 | ACGATTTCTACCCATGGTTAGACTA | 59.104 | 40.000 | 17.98 | 10.07 | 37.09 | 2.59 |
7714 | 12337 | 4.715297 | ACGATTTCTACCCATGGTTAGACT | 59.285 | 41.667 | 17.98 | 9.08 | 37.09 | 3.24 |
7715 | 12338 | 5.019785 | ACGATTTCTACCCATGGTTAGAC | 57.980 | 43.478 | 17.98 | 6.89 | 37.09 | 2.59 |
7716 | 12339 | 4.712829 | TGACGATTTCTACCCATGGTTAGA | 59.287 | 41.667 | 14.65 | 14.65 | 37.09 | 2.10 |
7717 | 12340 | 4.809426 | GTGACGATTTCTACCCATGGTTAG | 59.191 | 45.833 | 10.02 | 10.02 | 37.09 | 2.34 |
7718 | 12341 | 4.468510 | AGTGACGATTTCTACCCATGGTTA | 59.531 | 41.667 | 11.73 | 0.00 | 37.09 | 2.85 |
7719 | 12342 | 3.263425 | AGTGACGATTTCTACCCATGGTT | 59.737 | 43.478 | 11.73 | 0.00 | 37.09 | 3.67 |
7720 | 12343 | 2.838202 | AGTGACGATTTCTACCCATGGT | 59.162 | 45.455 | 11.73 | 1.30 | 40.16 | 3.55 |
7785 | 12411 | 4.267928 | GTGATGTAATTCCTTTCTCGTCCG | 59.732 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
7786 | 12412 | 4.571176 | GGTGATGTAATTCCTTTCTCGTCC | 59.429 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
7795 | 12421 | 8.949421 | ACTATTTATCCTGGTGATGTAATTCCT | 58.051 | 33.333 | 0.00 | 0.00 | 34.76 | 3.36 |
7832 | 12459 | 6.375830 | TGGAAGGTGTAATTGTATGGTGTA | 57.624 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
7837 | 12464 | 5.392595 | CCGGTTTGGAAGGTGTAATTGTATG | 60.393 | 44.000 | 0.00 | 0.00 | 42.00 | 2.39 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.