Multiple sequence alignment - TraesCS2A01G514500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G514500 chr2A 100.000 3663 0 0 1 3663 739251912 739255574 0.000000e+00 6765.0
1 TraesCS2A01G514500 chr2A 83.501 497 55 14 2775 3253 739273048 739273535 4.340000e-119 438.0
2 TraesCS2A01G514500 chr2A 84.231 260 36 4 58 313 739182793 739183051 7.850000e-62 248.0
3 TraesCS2A01G514500 chr2A 84.865 185 15 4 141 316 739137740 739137920 1.350000e-39 174.0
4 TraesCS2A01G514500 chr2A 84.874 119 6 7 2 108 739136852 739136970 3.870000e-20 110.0
5 TraesCS2A01G514500 chr2D 84.627 2563 254 80 417 2908 607633792 607636285 0.000000e+00 2422.0
6 TraesCS2A01G514500 chr2D 87.558 1294 113 29 1643 2908 607637902 607639175 0.000000e+00 1454.0
7 TraesCS2A01G514500 chr2D 88.571 700 50 12 2987 3660 607639310 607640005 0.000000e+00 822.0
8 TraesCS2A01G514500 chr2D 88.126 699 33 14 2987 3660 607636412 607637085 0.000000e+00 785.0
9 TraesCS2A01G514500 chr2D 92.453 318 14 5 1 316 607541938 607542247 2.600000e-121 446.0
10 TraesCS2A01G514500 chr2D 86.275 408 36 6 2796 3185 607642073 607642478 3.380000e-115 425.0
11 TraesCS2A01G514500 chr2D 86.979 192 20 3 125 316 607510429 607510615 1.030000e-50 211.0
12 TraesCS2A01G514500 chr2D 79.580 333 34 17 54 383 607603526 607603827 1.330000e-49 207.0
13 TraesCS2A01G514500 chr2D 82.305 243 25 8 79 311 607631964 607632198 1.040000e-45 195.0
14 TraesCS2A01G514500 chr2D 85.833 120 16 1 3471 3590 607643847 607643965 3.840000e-25 126.0
15 TraesCS2A01G514500 chr2B 82.731 996 92 37 919 1897 738487675 738486743 0.000000e+00 813.0
16 TraesCS2A01G514500 chr2B 81.669 731 77 30 2298 3004 738485928 738485231 4.130000e-154 555.0
17 TraesCS2A01G514500 chr2B 83.828 606 52 23 3099 3660 740560951 740561554 5.380000e-148 534.0
18 TraesCS2A01G514500 chr2B 83.333 120 19 1 3471 3590 740564162 740564280 3.870000e-20 110.0
19 TraesCS2A01G514500 chr2B 94.118 51 3 0 3060 3110 740547859 740547909 1.090000e-10 78.7
20 TraesCS2A01G514500 chr2B 97.561 41 1 0 3620 3660 740564330 740564370 1.820000e-08 71.3
21 TraesCS2A01G514500 chr3D 79.139 302 32 15 1632 1928 15460900 15461175 2.910000e-41 180.0
22 TraesCS2A01G514500 chr5B 97.059 34 1 0 384 417 72083921 72083888 1.420000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G514500 chr2A 739251912 739255574 3662 False 6765.000000 6765 100.000000 1 3663 1 chr2A.!!$F2 3662
1 TraesCS2A01G514500 chr2D 607631964 607643965 12001 False 889.857143 2422 86.185000 79 3660 7 chr2D.!!$F4 3581
2 TraesCS2A01G514500 chr2B 738485231 738487675 2444 True 684.000000 813 82.200000 919 3004 2 chr2B.!!$R1 2085
3 TraesCS2A01G514500 chr2B 740560951 740564370 3419 False 238.433333 534 88.240667 3099 3660 3 chr2B.!!$F2 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
648 2203 0.024491 CGCAGCATACGGTACAAACG 59.976 55.0 0.0 0.0 37.36 3.60 F
1539 3133 0.038159 GACCCTGACTCAACCTCGTG 60.038 60.0 0.0 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2337 7299 0.320771 AGCACCAGTAGCAAACGAGG 60.321 55.0 0.00 0.0 35.15 4.63 R
2981 7971 0.251787 GGAGGGTCCCTGCATTTTGT 60.252 55.0 23.99 0.0 41.77 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.639286 GCCAATAATCTGCCCGCG 59.361 61.111 0.00 0.00 0.00 6.46
18 19 2.639286 CCAATAATCTGCCCGCGC 59.361 61.111 0.00 0.00 0.00 6.86
19 20 2.639286 CAATAATCTGCCCGCGCC 59.361 61.111 0.00 0.00 0.00 6.53
20 21 2.186160 CAATAATCTGCCCGCGCCA 61.186 57.895 0.00 0.00 0.00 5.69
21 22 1.228245 AATAATCTGCCCGCGCCAT 60.228 52.632 0.00 0.00 0.00 4.40
22 23 1.237285 AATAATCTGCCCGCGCCATC 61.237 55.000 0.00 0.00 0.00 3.51
33 34 4.228097 CGCCATCGCAGCTTTCGG 62.228 66.667 5.43 0.00 34.03 4.30
34 35 4.543084 GCCATCGCAGCTTTCGGC 62.543 66.667 5.43 0.07 42.19 5.54
35 36 3.880846 CCATCGCAGCTTTCGGCC 61.881 66.667 0.00 0.00 43.05 6.13
36 37 2.821366 CATCGCAGCTTTCGGCCT 60.821 61.111 0.00 0.00 43.05 5.19
37 38 2.045926 ATCGCAGCTTTCGGCCTT 60.046 55.556 0.00 0.00 43.05 4.35
38 39 1.675641 ATCGCAGCTTTCGGCCTTT 60.676 52.632 0.00 0.00 43.05 3.11
39 40 1.926511 ATCGCAGCTTTCGGCCTTTG 61.927 55.000 0.00 0.00 43.05 2.77
40 41 2.259511 GCAGCTTTCGGCCTTTGG 59.740 61.111 0.00 0.00 43.05 3.28
41 42 2.268076 GCAGCTTTCGGCCTTTGGA 61.268 57.895 0.00 0.00 43.05 3.53
42 43 1.878775 CAGCTTTCGGCCTTTGGAG 59.121 57.895 0.00 0.00 43.05 3.86
43 44 1.973812 AGCTTTCGGCCTTTGGAGC 60.974 57.895 0.00 3.18 43.05 4.70
44 45 2.870372 CTTTCGGCCTTTGGAGCG 59.130 61.111 0.00 0.00 0.00 5.03
45 46 1.966451 CTTTCGGCCTTTGGAGCGT 60.966 57.895 0.00 0.00 0.00 5.07
46 47 0.672401 CTTTCGGCCTTTGGAGCGTA 60.672 55.000 0.00 0.00 0.00 4.42
47 48 0.672401 TTTCGGCCTTTGGAGCGTAG 60.672 55.000 0.00 0.00 0.00 3.51
48 49 1.823169 TTCGGCCTTTGGAGCGTAGT 61.823 55.000 0.00 0.00 0.00 2.73
49 50 0.966875 TCGGCCTTTGGAGCGTAGTA 60.967 55.000 0.00 0.00 0.00 1.82
50 51 0.108520 CGGCCTTTGGAGCGTAGTAA 60.109 55.000 0.00 0.00 0.00 2.24
51 52 1.472728 CGGCCTTTGGAGCGTAGTAAT 60.473 52.381 0.00 0.00 0.00 1.89
52 53 2.210961 GGCCTTTGGAGCGTAGTAATC 58.789 52.381 0.00 0.00 0.00 1.75
53 54 1.859080 GCCTTTGGAGCGTAGTAATCG 59.141 52.381 0.00 0.00 0.00 3.34
54 55 2.737679 GCCTTTGGAGCGTAGTAATCGT 60.738 50.000 0.00 0.00 0.00 3.73
55 56 3.518590 CCTTTGGAGCGTAGTAATCGTT 58.481 45.455 0.00 0.00 0.00 3.85
56 57 3.306166 CCTTTGGAGCGTAGTAATCGTTG 59.694 47.826 0.00 0.00 0.00 4.10
57 58 2.572191 TGGAGCGTAGTAATCGTTGG 57.428 50.000 0.00 0.00 0.00 3.77
58 59 1.135527 TGGAGCGTAGTAATCGTTGGG 59.864 52.381 0.00 0.00 0.00 4.12
59 60 1.406539 GGAGCGTAGTAATCGTTGGGA 59.593 52.381 0.00 0.00 0.00 4.37
60 61 2.035576 GGAGCGTAGTAATCGTTGGGAT 59.964 50.000 0.00 0.00 36.78 3.85
61 62 3.050619 GAGCGTAGTAATCGTTGGGATG 58.949 50.000 0.00 0.00 34.93 3.51
62 63 2.691526 AGCGTAGTAATCGTTGGGATGA 59.308 45.455 0.00 0.00 34.93 2.92
63 64 3.050619 GCGTAGTAATCGTTGGGATGAG 58.949 50.000 0.00 0.00 34.93 2.90
64 65 3.243301 GCGTAGTAATCGTTGGGATGAGA 60.243 47.826 0.00 0.00 34.93 3.27
65 66 4.537965 CGTAGTAATCGTTGGGATGAGAG 58.462 47.826 0.00 0.00 34.93 3.20
66 67 4.556898 CGTAGTAATCGTTGGGATGAGAGG 60.557 50.000 0.00 0.00 34.93 3.69
67 68 2.103263 AGTAATCGTTGGGATGAGAGGC 59.897 50.000 0.00 0.00 34.93 4.70
68 69 0.181350 AATCGTTGGGATGAGAGGCC 59.819 55.000 0.00 0.00 34.93 5.19
69 70 0.692419 ATCGTTGGGATGAGAGGCCT 60.692 55.000 3.86 3.86 32.92 5.19
70 71 0.032515 TCGTTGGGATGAGAGGCCTA 60.033 55.000 4.42 0.00 0.00 3.93
71 72 0.390860 CGTTGGGATGAGAGGCCTAG 59.609 60.000 4.42 0.00 0.00 3.02
72 73 1.501582 GTTGGGATGAGAGGCCTAGT 58.498 55.000 4.42 0.00 0.00 2.57
73 74 1.139853 GTTGGGATGAGAGGCCTAGTG 59.860 57.143 4.42 0.00 0.00 2.74
74 75 0.399091 TGGGATGAGAGGCCTAGTGG 60.399 60.000 4.42 0.00 0.00 4.00
75 76 0.105453 GGGATGAGAGGCCTAGTGGA 60.105 60.000 4.42 0.00 34.57 4.02
76 77 1.692762 GGGATGAGAGGCCTAGTGGAA 60.693 57.143 4.42 0.00 34.57 3.53
77 78 1.414550 GGATGAGAGGCCTAGTGGAAC 59.585 57.143 4.42 0.00 34.57 3.62
96 97 2.143122 ACGCACATGTCGACTTCAAAT 58.857 42.857 17.92 0.00 0.00 2.32
97 98 3.322369 ACGCACATGTCGACTTCAAATA 58.678 40.909 17.92 0.00 0.00 1.40
104 106 4.002906 TGTCGACTTCAAATACAAGGCT 57.997 40.909 17.92 0.00 0.00 4.58
109 111 2.017049 CTTCAAATACAAGGCTCCGGG 58.983 52.381 0.00 0.00 0.00 5.73
110 112 1.281419 TCAAATACAAGGCTCCGGGA 58.719 50.000 0.00 0.00 0.00 5.14
143 154 0.810031 GACGTCCATGCGTGCCTTAT 60.810 55.000 3.51 0.00 45.79 1.73
159 170 6.199393 GTGCCTTATCAACACGATTATTTCC 58.801 40.000 0.00 0.00 35.39 3.13
162 173 5.756347 CCTTATCAACACGATTATTTCCCGA 59.244 40.000 0.00 0.00 35.39 5.14
163 174 6.426937 CCTTATCAACACGATTATTTCCCGAT 59.573 38.462 0.00 0.00 35.39 4.18
164 175 5.924475 ATCAACACGATTATTTCCCGATC 57.076 39.130 0.00 0.00 0.00 3.69
165 176 3.799963 TCAACACGATTATTTCCCGATCG 59.200 43.478 8.51 8.51 45.87 3.69
166 177 2.132762 ACACGATTATTTCCCGATCGC 58.867 47.619 10.32 0.00 44.69 4.58
167 178 1.459592 CACGATTATTTCCCGATCGCC 59.540 52.381 10.32 0.00 44.69 5.54
168 179 0.713883 CGATTATTTCCCGATCGCCG 59.286 55.000 10.32 1.39 36.63 6.46
184 195 2.492773 CCGGGCAAATGATGGAGGC 61.493 63.158 0.00 0.00 0.00 4.70
200 211 3.330853 GCGAATCGGCCTAGCGTG 61.331 66.667 4.35 0.00 0.00 5.34
215 226 2.357034 GTGGGCATCGTGACGTGT 60.357 61.111 4.40 0.00 0.00 4.49
225 236 3.145212 TCGTGACGTGTAAGATCATGG 57.855 47.619 4.40 0.00 31.51 3.66
227 238 2.852413 CGTGACGTGTAAGATCATGGAC 59.148 50.000 0.00 0.00 0.00 4.02
229 240 2.159296 TGACGTGTAAGATCATGGACGG 60.159 50.000 0.00 0.00 0.00 4.79
230 241 1.822990 ACGTGTAAGATCATGGACGGT 59.177 47.619 10.73 0.00 0.00 4.83
238 249 5.629079 AAGATCATGGACGGTTTTTCTTC 57.371 39.130 0.00 0.00 0.00 2.87
239 250 4.010349 AGATCATGGACGGTTTTTCTTCC 58.990 43.478 0.00 0.00 0.00 3.46
240 251 2.510613 TCATGGACGGTTTTTCTTCCC 58.489 47.619 0.00 0.00 0.00 3.97
245 256 3.220110 GGACGGTTTTTCTTCCCTTCTT 58.780 45.455 0.00 0.00 0.00 2.52
246 257 3.004419 GGACGGTTTTTCTTCCCTTCTTG 59.996 47.826 0.00 0.00 0.00 3.02
250 261 3.881089 GGTTTTTCTTCCCTTCTTGTCGA 59.119 43.478 0.00 0.00 0.00 4.20
254 265 1.000955 TCTTCCCTTCTTGTCGACAGC 59.999 52.381 19.11 0.00 0.00 4.40
307 318 1.154205 CCTATCTCCGCCGTGCTTTG 61.154 60.000 0.00 0.00 0.00 2.77
308 319 1.153449 TATCTCCGCCGTGCTTTGG 60.153 57.895 0.00 0.00 0.00 3.28
309 320 2.587322 TATCTCCGCCGTGCTTTGGG 62.587 60.000 0.00 0.00 0.00 4.12
314 325 4.279043 GCCGTGCTTTGGGCGTTT 62.279 61.111 0.00 0.00 45.43 3.60
315 326 2.050442 CCGTGCTTTGGGCGTTTC 60.050 61.111 0.00 0.00 45.43 2.78
316 327 2.718731 CGTGCTTTGGGCGTTTCA 59.281 55.556 0.00 0.00 45.43 2.69
317 328 1.285641 CGTGCTTTGGGCGTTTCAT 59.714 52.632 0.00 0.00 45.43 2.57
318 329 0.318614 CGTGCTTTGGGCGTTTCATT 60.319 50.000 0.00 0.00 45.43 2.57
319 330 1.418373 GTGCTTTGGGCGTTTCATTC 58.582 50.000 0.00 0.00 45.43 2.67
320 331 1.035923 TGCTTTGGGCGTTTCATTCA 58.964 45.000 0.00 0.00 45.43 2.57
321 332 1.617850 TGCTTTGGGCGTTTCATTCAT 59.382 42.857 0.00 0.00 45.43 2.57
322 333 1.994779 GCTTTGGGCGTTTCATTCATG 59.005 47.619 0.00 0.00 0.00 3.07
323 334 1.994779 CTTTGGGCGTTTCATTCATGC 59.005 47.619 0.00 0.00 0.00 4.06
324 335 1.255882 TTGGGCGTTTCATTCATGCT 58.744 45.000 0.00 0.00 0.00 3.79
325 336 2.121291 TGGGCGTTTCATTCATGCTA 57.879 45.000 0.00 0.00 0.00 3.49
326 337 2.441410 TGGGCGTTTCATTCATGCTAA 58.559 42.857 0.00 0.00 0.00 3.09
327 338 2.822561 TGGGCGTTTCATTCATGCTAAA 59.177 40.909 0.00 0.00 0.00 1.85
328 339 3.119531 TGGGCGTTTCATTCATGCTAAAG 60.120 43.478 0.00 0.00 0.00 1.85
329 340 3.128589 GGGCGTTTCATTCATGCTAAAGA 59.871 43.478 0.00 0.00 0.00 2.52
330 341 4.380444 GGGCGTTTCATTCATGCTAAAGAA 60.380 41.667 0.00 0.00 0.00 2.52
331 342 4.795278 GGCGTTTCATTCATGCTAAAGAAG 59.205 41.667 0.00 0.00 0.00 2.85
332 343 5.391950 GGCGTTTCATTCATGCTAAAGAAGA 60.392 40.000 0.00 0.00 0.00 2.87
333 344 6.086222 GCGTTTCATTCATGCTAAAGAAGAA 58.914 36.000 0.00 0.00 0.00 2.52
334 345 6.250104 GCGTTTCATTCATGCTAAAGAAGAAG 59.750 38.462 0.00 0.00 0.00 2.85
335 346 7.521529 CGTTTCATTCATGCTAAAGAAGAAGA 58.478 34.615 0.00 0.00 0.00 2.87
336 347 8.017373 CGTTTCATTCATGCTAAAGAAGAAGAA 58.983 33.333 0.00 0.00 0.00 2.52
337 348 9.339492 GTTTCATTCATGCTAAAGAAGAAGAAG 57.661 33.333 0.00 0.00 0.00 2.85
338 349 8.853077 TTCATTCATGCTAAAGAAGAAGAAGA 57.147 30.769 0.00 0.00 0.00 2.87
339 350 8.853077 TCATTCATGCTAAAGAAGAAGAAGAA 57.147 30.769 0.00 0.00 0.00 2.52
340 351 8.944029 TCATTCATGCTAAAGAAGAAGAAGAAG 58.056 33.333 0.00 0.00 0.00 2.85
341 352 8.944029 CATTCATGCTAAAGAAGAAGAAGAAGA 58.056 33.333 0.00 0.00 0.00 2.87
342 353 8.908786 TTCATGCTAAAGAAGAAGAAGAAGAA 57.091 30.769 0.00 0.00 0.00 2.52
343 354 8.545229 TCATGCTAAAGAAGAAGAAGAAGAAG 57.455 34.615 0.00 0.00 0.00 2.85
344 355 8.370940 TCATGCTAAAGAAGAAGAAGAAGAAGA 58.629 33.333 0.00 0.00 0.00 2.87
345 356 8.997323 CATGCTAAAGAAGAAGAAGAAGAAGAA 58.003 33.333 0.00 0.00 0.00 2.52
346 357 8.600449 TGCTAAAGAAGAAGAAGAAGAAGAAG 57.400 34.615 0.00 0.00 0.00 2.85
347 358 8.424918 TGCTAAAGAAGAAGAAGAAGAAGAAGA 58.575 33.333 0.00 0.00 0.00 2.87
348 359 8.925700 GCTAAAGAAGAAGAAGAAGAAGAAGAG 58.074 37.037 0.00 0.00 0.00 2.85
351 362 9.546428 AAAGAAGAAGAAGAAGAAGAAGAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
352 363 7.154656 AGAAGAAGAAGAAGAAGAAGAGAAGC 58.845 38.462 0.00 0.00 0.00 3.86
353 364 5.469479 AGAAGAAGAAGAAGAAGAGAAGCG 58.531 41.667 0.00 0.00 0.00 4.68
354 365 3.584834 AGAAGAAGAAGAAGAGAAGCGC 58.415 45.455 0.00 0.00 0.00 5.92
355 366 3.258123 AGAAGAAGAAGAAGAGAAGCGCT 59.742 43.478 2.64 2.64 0.00 5.92
356 367 3.230743 AGAAGAAGAAGAGAAGCGCTC 57.769 47.619 12.06 4.30 44.29 5.03
357 368 2.094234 AGAAGAAGAAGAGAAGCGCTCC 60.094 50.000 12.06 0.00 45.10 4.70
358 369 0.534873 AGAAGAAGAGAAGCGCTCCC 59.465 55.000 12.06 5.93 45.10 4.30
359 370 0.534873 GAAGAAGAGAAGCGCTCCCT 59.465 55.000 12.06 11.69 45.10 4.20
360 371 0.980423 AAGAAGAGAAGCGCTCCCTT 59.020 50.000 12.06 14.43 45.10 3.95
361 372 0.980423 AGAAGAGAAGCGCTCCCTTT 59.020 50.000 12.06 3.41 45.10 3.11
362 373 1.349357 AGAAGAGAAGCGCTCCCTTTT 59.651 47.619 12.06 12.71 45.10 2.27
366 377 1.671379 GAAGCGCTCCCTTTTCGGT 60.671 57.895 12.06 0.00 35.33 4.69
385 396 3.326747 GGTCGTCAACTTGTGCTCTATT 58.673 45.455 0.00 0.00 0.00 1.73
386 397 3.746492 GGTCGTCAACTTGTGCTCTATTT 59.254 43.478 0.00 0.00 0.00 1.40
387 398 4.213482 GGTCGTCAACTTGTGCTCTATTTT 59.787 41.667 0.00 0.00 0.00 1.82
388 399 5.374898 GTCGTCAACTTGTGCTCTATTTTC 58.625 41.667 0.00 0.00 0.00 2.29
389 400 5.050363 GTCGTCAACTTGTGCTCTATTTTCA 60.050 40.000 0.00 0.00 0.00 2.69
391 402 5.140177 GTCAACTTGTGCTCTATTTTCACG 58.860 41.667 0.00 0.00 33.69 4.35
392 403 5.050363 GTCAACTTGTGCTCTATTTTCACGA 60.050 40.000 0.00 0.00 33.69 4.35
395 406 4.814234 ACTTGTGCTCTATTTTCACGACAA 59.186 37.500 0.00 0.00 33.69 3.18
396 407 4.990543 TGTGCTCTATTTTCACGACAAG 57.009 40.909 0.00 0.00 33.69 3.16
397 408 4.377021 TGTGCTCTATTTTCACGACAAGT 58.623 39.130 0.00 0.00 33.69 3.16
398 409 5.534407 TGTGCTCTATTTTCACGACAAGTA 58.466 37.500 0.00 0.00 33.69 2.24
400 411 6.649141 TGTGCTCTATTTTCACGACAAGTAAT 59.351 34.615 0.00 0.00 33.69 1.89
403 414 7.148474 TGCTCTATTTTCACGACAAGTAATTCC 60.148 37.037 0.00 0.00 0.00 3.01
404 415 7.285783 TCTATTTTCACGACAAGTAATTCCG 57.714 36.000 0.00 0.00 0.00 4.30
406 417 3.663995 TTCACGACAAGTAATTCCGGA 57.336 42.857 0.00 0.00 0.00 5.14
408 419 2.296752 TCACGACAAGTAATTCCGGACA 59.703 45.455 1.83 0.00 0.00 4.02
409 420 2.666508 CACGACAAGTAATTCCGGACAG 59.333 50.000 1.83 0.00 0.00 3.51
410 421 2.559668 ACGACAAGTAATTCCGGACAGA 59.440 45.455 1.83 0.00 0.00 3.41
411 422 3.179830 CGACAAGTAATTCCGGACAGAG 58.820 50.000 1.83 0.00 0.00 3.35
412 423 3.522553 GACAAGTAATTCCGGACAGAGG 58.477 50.000 1.83 0.00 0.00 3.69
413 424 3.170717 ACAAGTAATTCCGGACAGAGGA 58.829 45.455 1.83 0.00 35.69 3.71
423 1978 0.980423 GGACAGAGGAAGTGGAGCTT 59.020 55.000 0.00 0.00 40.76 3.74
425 1980 1.620819 GACAGAGGAAGTGGAGCTTGA 59.379 52.381 0.00 0.00 37.59 3.02
428 1983 1.899142 AGAGGAAGTGGAGCTTGAGTC 59.101 52.381 0.00 0.00 37.59 3.36
494 2049 3.691118 TGCAATAGAAGAGTGATTGGTGC 59.309 43.478 0.00 0.00 32.33 5.01
499 2054 2.037772 AGAAGAGTGATTGGTGCGAGTT 59.962 45.455 0.00 0.00 0.00 3.01
514 2069 3.057033 TGCGAGTTCTTCCTTACTGTACC 60.057 47.826 0.00 0.00 0.00 3.34
517 2072 2.830321 AGTTCTTCCTTACTGTACCCCG 59.170 50.000 0.00 0.00 0.00 5.73
521 2076 0.396139 TCCTTACTGTACCCCGCGAT 60.396 55.000 8.23 0.00 0.00 4.58
523 2078 0.317603 CTTACTGTACCCCGCGATCG 60.318 60.000 11.69 11.69 0.00 3.69
524 2079 1.031571 TTACTGTACCCCGCGATCGT 61.032 55.000 17.81 2.30 0.00 3.73
525 2080 1.439353 TACTGTACCCCGCGATCGTC 61.439 60.000 17.81 8.19 0.00 4.20
526 2081 2.438975 TGTACCCCGCGATCGTCT 60.439 61.111 17.81 0.00 0.00 4.18
617 2172 0.459063 GCGTTCCTTACTGTACCCCG 60.459 60.000 0.00 0.00 0.00 5.73
618 2173 0.890683 CGTTCCTTACTGTACCCCGT 59.109 55.000 0.00 0.00 0.00 5.28
641 2196 0.458543 CTTGTCTCGCAGCATACGGT 60.459 55.000 0.00 0.00 0.00 4.83
643 2198 0.099968 TGTCTCGCAGCATACGGTAC 59.900 55.000 0.00 0.00 0.00 3.34
645 2200 0.812549 TCTCGCAGCATACGGTACAA 59.187 50.000 0.00 0.00 0.00 2.41
646 2201 1.202817 TCTCGCAGCATACGGTACAAA 59.797 47.619 0.00 0.00 0.00 2.83
647 2202 1.323534 CTCGCAGCATACGGTACAAAC 59.676 52.381 0.00 0.00 0.00 2.93
648 2203 0.024491 CGCAGCATACGGTACAAACG 59.976 55.000 0.00 0.00 37.36 3.60
650 2205 0.372334 CAGCATACGGTACAAACGGC 59.628 55.000 0.00 0.00 35.23 5.68
652 2207 1.477700 AGCATACGGTACAAACGGCTA 59.522 47.619 0.00 0.00 35.23 3.93
653 2208 1.856597 GCATACGGTACAAACGGCTAG 59.143 52.381 0.00 0.00 35.23 3.42
654 2209 1.856597 CATACGGTACAAACGGCTAGC 59.143 52.381 6.04 6.04 35.23 3.42
655 2210 0.173255 TACGGTACAAACGGCTAGCC 59.827 55.000 24.75 24.75 35.23 3.93
656 2211 1.079681 CGGTACAAACGGCTAGCCA 60.080 57.895 32.47 10.00 35.37 4.75
658 2213 1.202440 CGGTACAAACGGCTAGCCATA 60.202 52.381 32.47 13.57 35.37 2.74
669 2241 3.430929 CGGCTAGCCATACAGAAGTTTCT 60.431 47.826 32.47 0.00 35.05 2.52
675 2247 7.255801 GCTAGCCATACAGAAGTTTCTCTCTAT 60.256 40.741 2.29 0.00 34.74 1.98
676 2248 6.815089 AGCCATACAGAAGTTTCTCTCTATG 58.185 40.000 0.00 0.00 34.74 2.23
752 2334 7.528996 TGAGAATCATGTGAAGATTTGGTTT 57.471 32.000 0.00 0.00 42.56 3.27
753 2335 7.954835 TGAGAATCATGTGAAGATTTGGTTTT 58.045 30.769 0.00 0.00 42.56 2.43
754 2336 8.084073 TGAGAATCATGTGAAGATTTGGTTTTC 58.916 33.333 0.00 0.00 42.56 2.29
755 2337 8.186709 AGAATCATGTGAAGATTTGGTTTTCT 57.813 30.769 0.00 0.00 35.93 2.52
756 2338 8.086522 AGAATCATGTGAAGATTTGGTTTTCTG 58.913 33.333 0.00 0.00 35.93 3.02
757 2339 6.957920 TCATGTGAAGATTTGGTTTTCTGA 57.042 33.333 0.00 0.00 0.00 3.27
758 2340 6.973843 TCATGTGAAGATTTGGTTTTCTGAG 58.026 36.000 0.00 0.00 0.00 3.35
759 2341 5.772825 TGTGAAGATTTGGTTTTCTGAGG 57.227 39.130 0.00 0.00 0.00 3.86
760 2342 5.445069 TGTGAAGATTTGGTTTTCTGAGGA 58.555 37.500 0.00 0.00 0.00 3.71
761 2343 5.890985 TGTGAAGATTTGGTTTTCTGAGGAA 59.109 36.000 0.00 0.00 0.00 3.36
762 2344 6.379703 TGTGAAGATTTGGTTTTCTGAGGAAA 59.620 34.615 0.00 0.00 39.38 3.13
763 2345 7.093552 TGTGAAGATTTGGTTTTCTGAGGAAAA 60.094 33.333 0.00 0.55 45.62 2.29
772 2354 1.609208 TCTGAGGAAAACAGCCAAGC 58.391 50.000 0.00 0.00 35.61 4.01
799 2381 2.036571 GTTACCCGGCCCGTCAAAG 61.037 63.158 0.85 0.00 0.00 2.77
803 2385 2.824041 CCGGCCCGTCAAAGGATG 60.824 66.667 0.85 0.00 0.00 3.51
809 2391 3.508840 CGTCAAAGGATGGCCCGC 61.509 66.667 0.00 0.00 40.87 6.13
810 2392 3.508840 GTCAAAGGATGGCCCGCG 61.509 66.667 0.00 0.00 40.87 6.46
851 2433 2.343426 GCTGCCGGGGAAAAGGAAG 61.343 63.158 2.18 0.00 36.23 3.46
857 2439 1.392131 GGGGAAAAGGAAGGCCCAT 59.608 57.895 0.00 0.00 42.52 4.00
859 2441 1.411644 GGGGAAAAGGAAGGCCCATAG 60.412 57.143 0.00 0.00 42.52 2.23
876 2458 0.393944 TAGTCTCACGCATCTCCGGT 60.394 55.000 0.00 0.00 0.00 5.28
895 2478 2.258013 CCACGGCGCTTTCTTTCCA 61.258 57.895 6.90 0.00 0.00 3.53
898 2481 0.605319 ACGGCGCTTTCTTTCCATCA 60.605 50.000 6.90 0.00 0.00 3.07
899 2482 0.734889 CGGCGCTTTCTTTCCATCAT 59.265 50.000 7.64 0.00 0.00 2.45
901 2484 2.533266 GGCGCTTTCTTTCCATCATTG 58.467 47.619 7.64 0.00 0.00 2.82
902 2485 1.922545 GCGCTTTCTTTCCATCATTGC 59.077 47.619 0.00 0.00 0.00 3.56
905 2488 2.419159 GCTTTCTTTCCATCATTGCCCC 60.419 50.000 0.00 0.00 0.00 5.80
906 2489 1.473258 TTCTTTCCATCATTGCCCCG 58.527 50.000 0.00 0.00 0.00 5.73
907 2490 0.395586 TCTTTCCATCATTGCCCCGG 60.396 55.000 0.00 0.00 0.00 5.73
1147 2741 0.467106 CTCCGAGATCTCCTCCTGCA 60.467 60.000 17.13 0.00 38.71 4.41
1150 2744 1.747774 GAGATCTCCTCCTGCAGCC 59.252 63.158 12.00 0.00 35.87 4.85
1509 3103 1.823470 GCAGCAATACATGGGCCGA 60.823 57.895 0.00 0.00 0.00 5.54
1525 3119 1.472662 CCGACAGTTCAGGTGACCCT 61.473 60.000 0.00 0.00 44.02 4.34
1539 3133 0.038159 GACCCTGACTCAACCTCGTG 60.038 60.000 0.00 0.00 0.00 4.35
1545 3139 2.425312 CTGACTCAACCTCGTGCTAGAT 59.575 50.000 0.00 0.00 0.00 1.98
1547 3146 3.258372 TGACTCAACCTCGTGCTAGATTT 59.742 43.478 0.00 0.00 0.00 2.17
1621 3227 5.864474 AGTCGTATTTAGAGTGCTTGAGTTG 59.136 40.000 0.00 0.00 0.00 3.16
1622 3228 5.634020 GTCGTATTTAGAGTGCTTGAGTTGT 59.366 40.000 0.00 0.00 0.00 3.32
1623 3229 6.145696 GTCGTATTTAGAGTGCTTGAGTTGTT 59.854 38.462 0.00 0.00 0.00 2.83
1626 3232 8.492748 CGTATTTAGAGTGCTTGAGTTGTTAAA 58.507 33.333 0.00 0.00 0.00 1.52
1629 3235 9.899226 ATTTAGAGTGCTTGAGTTGTTAAAATC 57.101 29.630 0.00 0.00 0.00 2.17
1630 3236 6.942532 AGAGTGCTTGAGTTGTTAAAATCA 57.057 33.333 0.00 0.00 38.55 2.57
1631 3237 7.333528 AGAGTGCTTGAGTTGTTAAAATCAA 57.666 32.000 1.96 1.96 45.37 2.57
1632 3238 7.771183 AGAGTGCTTGAGTTGTTAAAATCAAA 58.229 30.769 3.38 0.00 46.40 2.69
1633 3239 8.250332 AGAGTGCTTGAGTTGTTAAAATCAAAA 58.750 29.630 3.38 0.00 46.40 2.44
1634 3240 8.770438 AGTGCTTGAGTTGTTAAAATCAAAAA 57.230 26.923 3.38 0.00 46.40 1.94
1663 3285 6.088016 TCATGTTCTTGCAATGCTACTTTT 57.912 33.333 6.82 0.00 0.00 2.27
1693 6188 6.039270 GGTTAGCAGTGCACCAATGATTTATA 59.961 38.462 19.20 0.00 30.53 0.98
1775 6271 3.640498 TCCTGCCAAACAATGAACAATCA 59.360 39.130 0.00 0.00 40.57 2.57
1780 6276 5.821470 TGCCAAACAATGAACAATCACAATT 59.179 32.000 0.00 0.00 38.69 2.32
1840 6337 2.825861 ATTCTTTTTGCACAGGCCAG 57.174 45.000 5.01 0.00 40.13 4.85
1841 6338 0.104671 TTCTTTTTGCACAGGCCAGC 59.895 50.000 5.01 6.72 40.13 4.85
1851 6348 1.135315 CAGGCCAGCGAAATGAACG 59.865 57.895 5.01 0.00 0.00 3.95
2035 6994 2.515901 GGCTTGGCGGGTATGGAT 59.484 61.111 0.00 0.00 0.00 3.41
2060 7019 5.536538 GGAACTTTCCTCCAATTTCAGTTCT 59.463 40.000 8.58 0.00 44.11 3.01
2075 7036 6.877611 TTCAGTTCTGTGTTAAGGGAAATC 57.122 37.500 0.00 0.00 0.00 2.17
2096 7057 9.649167 GAAATCAGATCAAATTTGTTTCTGGAT 57.351 29.630 30.93 24.46 38.65 3.41
2111 7073 5.678132 TTCTGGATGAATAATGCATGTCG 57.322 39.130 0.00 0.00 35.86 4.35
2112 7074 3.499537 TCTGGATGAATAATGCATGTCGC 59.500 43.478 0.00 0.00 35.86 5.19
2113 7075 3.479489 TGGATGAATAATGCATGTCGCT 58.521 40.909 0.00 0.00 43.06 4.93
2136 7098 2.287547 GCACGAGTTGAATTGCTCCAAA 60.288 45.455 0.00 0.00 32.00 3.28
2144 7106 2.247358 GAATTGCTCCAAAACCCCTGA 58.753 47.619 0.00 0.00 0.00 3.86
2149 7111 2.316108 GCTCCAAAACCCCTGAAGAAA 58.684 47.619 0.00 0.00 0.00 2.52
2168 7130 2.409948 AGACAATGCTGGCTCCTTAC 57.590 50.000 0.00 0.00 35.15 2.34
2184 7146 4.579869 TCCTTACATTCAACCAAGAGAGC 58.420 43.478 0.00 0.00 0.00 4.09
2295 7257 1.214673 ACAATGCTGGCTCCTCATCAT 59.785 47.619 0.00 0.00 0.00 2.45
2370 7336 6.584942 GCTACTGGTGCTATTTTGGTTAAAAC 59.415 38.462 0.00 0.00 38.50 2.43
2392 7358 6.499106 ACCCAGGATTGTTTCTTTGAATTT 57.501 33.333 0.00 0.00 0.00 1.82
2394 7360 5.934043 CCCAGGATTGTTTCTTTGAATTTCC 59.066 40.000 0.00 0.00 0.00 3.13
2397 7363 6.985645 CAGGATTGTTTCTTTGAATTTCCACA 59.014 34.615 0.00 0.00 0.00 4.17
2443 7409 1.873591 TCTCTTTTGAGTTGCGCTTCC 59.126 47.619 9.73 0.00 46.30 3.46
2458 7424 2.033801 CGCTTCCTTCTTGGCATTATGG 59.966 50.000 0.00 0.00 35.26 2.74
2478 7444 8.885494 TTATGGGATGTTAATATGCTTTTTGC 57.115 30.769 3.84 0.00 43.25 3.68
2480 7446 5.424895 TGGGATGTTAATATGCTTTTTGCCT 59.575 36.000 3.84 0.00 42.00 4.75
2489 7457 0.104671 GCTTTTTGCCTTGCTGGTCA 59.895 50.000 0.00 0.00 38.35 4.02
2491 7459 2.807837 GCTTTTTGCCTTGCTGGTCATT 60.808 45.455 0.00 0.00 38.35 2.57
2497 7465 1.551883 GCCTTGCTGGTCATTCCAATT 59.448 47.619 0.00 0.00 46.59 2.32
2580 7548 4.313282 GTGAATGATGAGCTAGCAGCATA 58.687 43.478 18.83 9.18 43.42 3.14
2632 7600 0.392193 CAGAGCTTGTAGGGTGGCTG 60.392 60.000 0.00 0.00 35.01 4.85
2638 7606 2.288213 GCTTGTAGGGTGGCTGAAAAAC 60.288 50.000 0.00 0.00 0.00 2.43
2647 7615 2.290641 GTGGCTGAAAAACATCGAGTGT 59.709 45.455 0.00 0.00 44.84 3.55
2665 7633 5.960683 CGAGTGTTATCTCAAGAAGTAGACG 59.039 44.000 0.00 0.00 34.46 4.18
2666 7634 5.642686 AGTGTTATCTCAAGAAGTAGACGC 58.357 41.667 0.00 0.00 0.00 5.19
2691 7659 8.693542 CCATTTTCTAGGCACTTTTCAATTAG 57.306 34.615 0.00 0.00 41.75 1.73
2692 7660 8.522830 CCATTTTCTAGGCACTTTTCAATTAGA 58.477 33.333 0.00 0.00 41.75 2.10
2695 7663 7.630242 TTCTAGGCACTTTTCAATTAGATGG 57.370 36.000 0.00 0.00 41.75 3.51
2696 7664 6.122277 TCTAGGCACTTTTCAATTAGATGGG 58.878 40.000 0.00 0.00 41.75 4.00
2712 7682 4.320870 AGATGGGTAGTTGGTGTTTTACG 58.679 43.478 0.00 0.00 0.00 3.18
2716 7687 3.499537 GGGTAGTTGGTGTTTTACGAAGG 59.500 47.826 0.00 0.00 0.00 3.46
2718 7689 4.576053 GGTAGTTGGTGTTTTACGAAGGTT 59.424 41.667 0.00 0.00 0.00 3.50
2727 7698 5.448796 GTGTTTTACGAAGGTTACACAAACG 59.551 40.000 0.00 0.00 39.13 3.60
2728 7699 4.792528 TTTACGAAGGTTACACAAACGG 57.207 40.909 0.00 0.00 39.13 4.44
2742 7713 2.295909 ACAAACGGATTGGGATGTTGTG 59.704 45.455 3.00 0.00 43.66 3.33
2767 7744 5.012561 ACAGCAAGTCCTTACTCTTTCAGAT 59.987 40.000 0.00 0.00 33.75 2.90
2769 7746 4.094146 GCAAGTCCTTACTCTTTCAGATGC 59.906 45.833 0.00 0.00 33.75 3.91
2771 7748 5.489792 AGTCCTTACTCTTTCAGATGCAA 57.510 39.130 0.00 0.00 0.00 4.08
2772 7749 5.241662 AGTCCTTACTCTTTCAGATGCAAC 58.758 41.667 0.00 0.00 0.00 4.17
2776 7765 1.532868 ACTCTTTCAGATGCAACGTGC 59.467 47.619 0.00 0.00 45.29 5.34
2811 7800 4.457257 CAGGGAAGATCCTCTTTGAAACAC 59.543 45.833 0.00 0.00 36.73 3.32
2820 7809 4.136796 CCTCTTTGAAACACTGGATGTCA 58.863 43.478 0.00 0.00 42.31 3.58
2826 7815 4.522114 TGAAACACTGGATGTCAACAGAA 58.478 39.130 13.13 0.00 42.31 3.02
2839 7828 6.573664 TGTCAACAGAATTTCCAGGTATTG 57.426 37.500 0.00 0.00 0.00 1.90
2845 7834 7.161773 ACAGAATTTCCAGGTATTGAATGTG 57.838 36.000 0.00 0.00 0.00 3.21
2848 7837 7.543172 CAGAATTTCCAGGTATTGAATGTGTTG 59.457 37.037 0.00 0.00 0.00 3.33
2849 7838 6.916360 ATTTCCAGGTATTGAATGTGTTGT 57.084 33.333 0.00 0.00 0.00 3.32
2860 7850 3.500299 TGAATGTGTTGTGTTATCACGGG 59.500 43.478 0.00 0.00 46.49 5.28
2861 7851 2.623878 TGTGTTGTGTTATCACGGGT 57.376 45.000 0.00 0.00 46.49 5.28
2872 7862 4.926832 TGTTATCACGGGTGCATATATTCG 59.073 41.667 0.00 0.00 0.00 3.34
2889 7879 2.427232 TCGGACGAACCAAGTTACTG 57.573 50.000 0.00 0.00 38.90 2.74
2890 7880 0.788391 CGGACGAACCAAGTTACTGC 59.212 55.000 0.00 0.00 38.90 4.40
2908 7898 1.437986 CGAGCCTAGCCACCAGTAC 59.562 63.158 0.00 0.00 0.00 2.73
2909 7899 1.038130 CGAGCCTAGCCACCAGTACT 61.038 60.000 0.00 0.00 0.00 2.73
2910 7900 1.196012 GAGCCTAGCCACCAGTACTT 58.804 55.000 0.00 0.00 0.00 2.24
2911 7901 2.385803 GAGCCTAGCCACCAGTACTTA 58.614 52.381 0.00 0.00 0.00 2.24
2912 7902 2.966516 GAGCCTAGCCACCAGTACTTAT 59.033 50.000 0.00 0.00 0.00 1.73
2913 7903 3.385115 AGCCTAGCCACCAGTACTTATT 58.615 45.455 0.00 0.00 0.00 1.40
2914 7904 3.780850 AGCCTAGCCACCAGTACTTATTT 59.219 43.478 0.00 0.00 0.00 1.40
2915 7905 3.877508 GCCTAGCCACCAGTACTTATTTG 59.122 47.826 0.00 0.00 0.00 2.32
2916 7906 3.877508 CCTAGCCACCAGTACTTATTTGC 59.122 47.826 0.00 0.00 0.00 3.68
2917 7907 2.356135 AGCCACCAGTACTTATTTGCG 58.644 47.619 0.00 0.00 0.00 4.85
2918 7908 2.081462 GCCACCAGTACTTATTTGCGT 58.919 47.619 0.00 0.00 0.00 5.24
2919 7909 2.159572 GCCACCAGTACTTATTTGCGTG 60.160 50.000 0.00 0.00 0.00 5.34
2920 7910 3.331150 CCACCAGTACTTATTTGCGTGA 58.669 45.455 0.00 0.00 0.00 4.35
2921 7911 3.370978 CCACCAGTACTTATTTGCGTGAG 59.629 47.826 0.00 0.00 0.00 3.51
2954 7944 2.436646 CACGGCTGCACCTAAGGG 60.437 66.667 0.50 0.00 35.61 3.95
2955 7945 3.717294 ACGGCTGCACCTAAGGGG 61.717 66.667 0.50 0.00 41.89 4.79
2956 7946 3.399181 CGGCTGCACCTAAGGGGA 61.399 66.667 0.50 0.00 38.76 4.81
2957 7947 2.966732 CGGCTGCACCTAAGGGGAA 61.967 63.158 0.50 0.00 38.76 3.97
2958 7948 1.378646 GGCTGCACCTAAGGGGAAC 60.379 63.158 0.50 0.00 38.76 3.62
2959 7949 1.685820 GCTGCACCTAAGGGGAACT 59.314 57.895 0.00 0.00 38.76 3.01
2960 7950 0.038310 GCTGCACCTAAGGGGAACTT 59.962 55.000 0.00 0.00 43.28 2.66
2962 7952 2.092375 GCTGCACCTAAGGGGAACTTAT 60.092 50.000 0.00 0.00 40.71 1.73
2963 7953 3.135895 GCTGCACCTAAGGGGAACTTATA 59.864 47.826 0.00 0.00 40.71 0.98
2965 7955 5.690364 GCTGCACCTAAGGGGAACTTATATT 60.690 44.000 0.00 0.00 40.71 1.28
2966 7956 5.690865 TGCACCTAAGGGGAACTTATATTG 58.309 41.667 0.00 0.00 40.71 1.90
2967 7957 4.519350 GCACCTAAGGGGAACTTATATTGC 59.481 45.833 0.00 0.00 40.71 3.56
2968 7958 5.690865 CACCTAAGGGGAACTTATATTGCA 58.309 41.667 0.00 0.00 40.71 4.08
2969 7959 5.531287 CACCTAAGGGGAACTTATATTGCAC 59.469 44.000 0.00 0.00 40.71 4.57
2970 7960 5.432060 ACCTAAGGGGAACTTATATTGCACT 59.568 40.000 0.00 0.00 40.71 4.40
2971 7961 5.765182 CCTAAGGGGAACTTATATTGCACTG 59.235 44.000 0.00 0.00 40.71 3.66
2973 7963 4.781934 AGGGGAACTTATATTGCACTGTC 58.218 43.478 0.00 0.00 31.59 3.51
2974 7964 3.560068 GGGGAACTTATATTGCACTGTCG 59.440 47.826 0.00 0.00 0.00 4.35
2976 7966 4.270325 GGGAACTTATATTGCACTGTCGAC 59.730 45.833 9.11 9.11 0.00 4.20
2978 7968 2.858344 ACTTATATTGCACTGTCGACGC 59.142 45.455 11.62 9.03 0.00 5.19
2979 7969 1.472990 TATATTGCACTGTCGACGCG 58.527 50.000 11.62 3.53 0.00 6.01
2981 7971 4.949404 TATATTGCACTGTCGACGCGCA 62.949 50.000 18.78 18.78 0.00 6.09
2984 7974 3.326981 CACTGTCGACGCGCACAA 61.327 61.111 5.73 0.00 0.00 3.33
2985 7975 2.583868 ACTGTCGACGCGCACAAA 60.584 55.556 5.73 0.00 0.00 2.83
3016 8083 0.914644 CTCCCTGGAAGCAGGATTGA 59.085 55.000 0.00 0.00 45.00 2.57
3027 8094 2.579860 AGCAGGATTGATGGAGTTCCTT 59.420 45.455 0.00 0.00 36.45 3.36
3096 8163 7.308450 AGCCATACAGAGATCTAGCATTAAA 57.692 36.000 0.00 0.00 0.00 1.52
3099 8166 8.663911 GCCATACAGAGATCTAGCATTAAAATC 58.336 37.037 0.00 0.00 0.00 2.17
3124 8191 1.407437 CCTTCAGCCCTTTCAGCGTAT 60.407 52.381 0.00 0.00 34.64 3.06
3129 8196 2.684881 CAGCCCTTTCAGCGTATGATTT 59.315 45.455 0.00 0.00 37.89 2.17
3151 8218 4.426736 TTCCGTTTTCAGAGGTTTAGGT 57.573 40.909 0.00 0.00 0.00 3.08
3170 8237 2.228822 GGTAACACAAGCAACTGATGGG 59.771 50.000 0.00 0.00 0.00 4.00
3192 8263 3.938289 TCATAGCAAAAGCAATGCACA 57.062 38.095 8.35 0.00 46.22 4.57
3270 8358 5.613358 AGTTAGCAAGTTCAAAAGGATCG 57.387 39.130 0.00 0.00 0.00 3.69
3285 8373 2.167693 AGGATCGTTCTGCATAAACCGA 59.832 45.455 6.54 3.86 0.00 4.69
3290 8378 3.802139 TCGTTCTGCATAAACCGATCATC 59.198 43.478 6.54 0.00 0.00 2.92
3307 8397 3.790091 TCATCAGGATTTCTCAGCTTCG 58.210 45.455 0.00 0.00 0.00 3.79
3319 8409 3.764434 TCTCAGCTTCGTCTACTTCCATT 59.236 43.478 0.00 0.00 0.00 3.16
3398 8508 4.499696 CGACTCCAAAGATTGCCAAGTTTT 60.500 41.667 0.00 0.00 0.00 2.43
3422 8532 2.814336 GAGACTGGCAAAGTAAGTTGGG 59.186 50.000 0.00 0.00 40.07 4.12
3545 8655 7.336931 TGGACTTTCTTGTATATTCTTTCAGCC 59.663 37.037 0.00 0.00 0.00 4.85
3549 8659 5.041287 TCTTGTATATTCTTTCAGCCGTCG 58.959 41.667 0.00 0.00 0.00 5.12
3566 8676 2.221749 CGTCGGAATGAATGCCTACATG 59.778 50.000 0.00 0.00 36.36 3.21
3612 8723 5.388599 AAAGGAGGTGTGATTTATAGGGG 57.611 43.478 0.00 0.00 0.00 4.79
3615 8741 4.846940 AGGAGGTGTGATTTATAGGGGATC 59.153 45.833 0.00 0.00 0.00 3.36
3660 8786 0.185901 TGGTTTTTGCAGAGGCCTCT 59.814 50.000 30.40 30.40 41.37 3.69
3661 8787 0.884514 GGTTTTTGCAGAGGCCTCTC 59.115 55.000 33.06 25.01 37.98 3.20
3662 8788 0.884514 GTTTTTGCAGAGGCCTCTCC 59.115 55.000 33.06 25.49 40.83 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.639286 CGCGGGCAGATTATTGGC 59.361 61.111 0.00 0.00 42.44 4.52
5 6 2.280797 GATGGCGCGGGCAGATTA 60.281 61.111 26.61 6.91 42.43 1.75
16 17 4.228097 CCGAAAGCTGCGATGGCG 62.228 66.667 10.48 0.00 44.10 5.69
17 18 4.543084 GCCGAAAGCTGCGATGGC 62.543 66.667 10.48 11.27 38.99 4.40
18 19 3.880846 GGCCGAAAGCTGCGATGG 61.881 66.667 10.48 0.00 43.05 3.51
19 20 1.926511 AAAGGCCGAAAGCTGCGATG 61.927 55.000 10.48 0.00 43.05 3.84
20 21 1.675641 AAAGGCCGAAAGCTGCGAT 60.676 52.632 10.48 0.00 43.05 4.58
21 22 2.281484 AAAGGCCGAAAGCTGCGA 60.281 55.556 10.48 0.00 43.05 5.10
22 23 2.126734 CAAAGGCCGAAAGCTGCG 60.127 61.111 0.00 2.49 43.05 5.18
23 24 2.205243 CTCCAAAGGCCGAAAGCTGC 62.205 60.000 0.00 0.00 43.05 5.25
24 25 1.878775 CTCCAAAGGCCGAAAGCTG 59.121 57.895 0.00 0.00 43.05 4.24
25 26 1.973812 GCTCCAAAGGCCGAAAGCT 60.974 57.895 0.00 0.00 43.05 3.74
26 27 2.568612 GCTCCAAAGGCCGAAAGC 59.431 61.111 0.00 0.00 42.60 3.51
27 28 0.672401 TACGCTCCAAAGGCCGAAAG 60.672 55.000 0.00 0.00 0.00 2.62
28 29 0.672401 CTACGCTCCAAAGGCCGAAA 60.672 55.000 0.00 0.00 0.00 3.46
29 30 1.079405 CTACGCTCCAAAGGCCGAA 60.079 57.895 0.00 0.00 0.00 4.30
30 31 0.966875 TACTACGCTCCAAAGGCCGA 60.967 55.000 0.00 0.00 0.00 5.54
31 32 0.108520 TTACTACGCTCCAAAGGCCG 60.109 55.000 0.00 0.00 0.00 6.13
32 33 2.210961 GATTACTACGCTCCAAAGGCC 58.789 52.381 0.00 0.00 0.00 5.19
33 34 1.859080 CGATTACTACGCTCCAAAGGC 59.141 52.381 0.00 0.00 0.00 4.35
34 35 3.160777 ACGATTACTACGCTCCAAAGG 57.839 47.619 0.00 0.00 0.00 3.11
35 36 3.306166 CCAACGATTACTACGCTCCAAAG 59.694 47.826 0.00 0.00 0.00 2.77
36 37 3.255725 CCAACGATTACTACGCTCCAAA 58.744 45.455 0.00 0.00 0.00 3.28
37 38 2.417651 CCCAACGATTACTACGCTCCAA 60.418 50.000 0.00 0.00 0.00 3.53
38 39 1.135527 CCCAACGATTACTACGCTCCA 59.864 52.381 0.00 0.00 0.00 3.86
39 40 1.406539 TCCCAACGATTACTACGCTCC 59.593 52.381 0.00 0.00 0.00 4.70
40 41 2.857592 TCCCAACGATTACTACGCTC 57.142 50.000 0.00 0.00 0.00 5.03
41 42 2.691526 TCATCCCAACGATTACTACGCT 59.308 45.455 0.00 0.00 0.00 5.07
42 43 3.050619 CTCATCCCAACGATTACTACGC 58.949 50.000 0.00 0.00 0.00 4.42
43 44 4.537965 CTCTCATCCCAACGATTACTACG 58.462 47.826 0.00 0.00 0.00 3.51
44 45 4.796618 GCCTCTCATCCCAACGATTACTAC 60.797 50.000 0.00 0.00 0.00 2.73
45 46 3.321111 GCCTCTCATCCCAACGATTACTA 59.679 47.826 0.00 0.00 0.00 1.82
46 47 2.103263 GCCTCTCATCCCAACGATTACT 59.897 50.000 0.00 0.00 0.00 2.24
47 48 2.484889 GCCTCTCATCCCAACGATTAC 58.515 52.381 0.00 0.00 0.00 1.89
48 49 1.416401 GGCCTCTCATCCCAACGATTA 59.584 52.381 0.00 0.00 0.00 1.75
49 50 0.181350 GGCCTCTCATCCCAACGATT 59.819 55.000 0.00 0.00 0.00 3.34
50 51 0.692419 AGGCCTCTCATCCCAACGAT 60.692 55.000 0.00 0.00 0.00 3.73
51 52 0.032515 TAGGCCTCTCATCCCAACGA 60.033 55.000 9.68 0.00 0.00 3.85
52 53 0.390860 CTAGGCCTCTCATCCCAACG 59.609 60.000 9.68 0.00 0.00 4.10
53 54 1.139853 CACTAGGCCTCTCATCCCAAC 59.860 57.143 9.68 0.00 0.00 3.77
54 55 1.500474 CACTAGGCCTCTCATCCCAA 58.500 55.000 9.68 0.00 0.00 4.12
55 56 0.399091 CCACTAGGCCTCTCATCCCA 60.399 60.000 9.68 0.00 0.00 4.37
56 57 0.105453 TCCACTAGGCCTCTCATCCC 60.105 60.000 9.68 0.00 33.74 3.85
57 58 1.414550 GTTCCACTAGGCCTCTCATCC 59.585 57.143 9.68 0.00 33.74 3.51
58 59 1.067821 CGTTCCACTAGGCCTCTCATC 59.932 57.143 9.68 0.00 33.74 2.92
59 60 1.115467 CGTTCCACTAGGCCTCTCAT 58.885 55.000 9.68 0.00 33.74 2.90
60 61 1.605058 GCGTTCCACTAGGCCTCTCA 61.605 60.000 9.68 0.00 33.74 3.27
61 62 1.142097 GCGTTCCACTAGGCCTCTC 59.858 63.158 9.68 0.00 33.74 3.20
62 63 1.609501 TGCGTTCCACTAGGCCTCT 60.610 57.895 9.68 0.00 33.74 3.69
63 64 1.448013 GTGCGTTCCACTAGGCCTC 60.448 63.158 9.68 0.00 41.35 4.70
64 65 1.553690 ATGTGCGTTCCACTAGGCCT 61.554 55.000 11.78 11.78 44.92 5.19
65 66 1.078426 ATGTGCGTTCCACTAGGCC 60.078 57.895 0.00 0.00 44.92 5.19
66 67 0.673644 ACATGTGCGTTCCACTAGGC 60.674 55.000 0.00 0.00 44.92 3.93
67 68 1.359848 GACATGTGCGTTCCACTAGG 58.640 55.000 1.15 0.00 44.92 3.02
68 69 0.992072 CGACATGTGCGTTCCACTAG 59.008 55.000 1.15 0.00 44.92 2.57
69 70 0.599060 TCGACATGTGCGTTCCACTA 59.401 50.000 1.15 0.00 44.92 2.74
70 71 0.944311 GTCGACATGTGCGTTCCACT 60.944 55.000 11.55 0.00 44.92 4.00
71 72 0.944311 AGTCGACATGTGCGTTCCAC 60.944 55.000 19.50 1.52 44.90 4.02
72 73 0.249699 AAGTCGACATGTGCGTTCCA 60.250 50.000 19.50 0.00 0.00 3.53
73 74 0.438830 GAAGTCGACATGTGCGTTCC 59.561 55.000 19.50 0.74 0.00 3.62
74 75 1.136690 TGAAGTCGACATGTGCGTTC 58.863 50.000 19.50 11.09 0.00 3.95
75 76 1.577468 TTGAAGTCGACATGTGCGTT 58.423 45.000 19.50 0.34 0.00 4.84
76 77 1.577468 TTTGAAGTCGACATGTGCGT 58.423 45.000 19.50 0.00 0.00 5.24
77 78 2.880822 ATTTGAAGTCGACATGTGCG 57.119 45.000 19.50 7.24 0.00 5.34
96 97 2.975536 CGTTCCCGGAGCCTTGTA 59.024 61.111 0.73 0.00 0.00 2.41
109 111 2.219562 CGTCACCGATACGCCGTTC 61.220 63.158 0.00 0.00 35.63 3.95
110 112 2.202518 CGTCACCGATACGCCGTT 60.203 61.111 0.00 0.00 35.63 4.44
119 121 3.676605 ACGCATGGACGTCACCGA 61.677 61.111 18.91 0.00 44.43 4.69
120 122 3.478394 CACGCATGGACGTCACCG 61.478 66.667 18.91 15.11 46.34 4.94
122 124 3.788766 GGCACGCATGGACGTCAC 61.789 66.667 18.91 7.49 46.34 3.67
127 129 1.064060 GTTGATAAGGCACGCATGGAC 59.936 52.381 0.00 0.00 0.00 4.02
129 131 1.093972 TGTTGATAAGGCACGCATGG 58.906 50.000 0.00 0.00 0.00 3.66
136 147 5.298276 GGGAAATAATCGTGTTGATAAGGCA 59.702 40.000 0.00 0.00 35.84 4.75
143 154 3.799963 CGATCGGGAAATAATCGTGTTGA 59.200 43.478 7.38 0.00 37.95 3.18
162 173 2.195567 CCATCATTTGCCCGGCGAT 61.196 57.895 9.30 0.00 0.00 4.58
163 174 2.828095 CCATCATTTGCCCGGCGA 60.828 61.111 9.30 0.00 0.00 5.54
164 175 2.828095 TCCATCATTTGCCCGGCG 60.828 61.111 4.58 0.00 0.00 6.46
165 176 2.492773 CCTCCATCATTTGCCCGGC 61.493 63.158 1.04 1.04 0.00 6.13
166 177 2.492773 GCCTCCATCATTTGCCCGG 61.493 63.158 0.00 0.00 0.00 5.73
167 178 2.837883 CGCCTCCATCATTTGCCCG 61.838 63.158 0.00 0.00 0.00 6.13
168 179 1.037030 TTCGCCTCCATCATTTGCCC 61.037 55.000 0.00 0.00 0.00 5.36
184 195 2.658593 CCACGCTAGGCCGATTCG 60.659 66.667 0.00 0.00 0.00 3.34
192 203 2.586079 CACGATGCCCACGCTAGG 60.586 66.667 0.00 0.00 35.36 3.02
200 211 0.108992 TCTTACACGTCACGATGCCC 60.109 55.000 2.91 0.00 0.00 5.36
207 218 2.852413 CGTCCATGATCTTACACGTCAC 59.148 50.000 0.00 0.00 0.00 3.67
215 226 5.646360 GGAAGAAAAACCGTCCATGATCTTA 59.354 40.000 0.00 0.00 0.00 2.10
225 236 3.630769 ACAAGAAGGGAAGAAAAACCGTC 59.369 43.478 0.00 0.00 33.71 4.79
227 238 3.303791 CGACAAGAAGGGAAGAAAAACCG 60.304 47.826 0.00 0.00 0.00 4.44
229 240 4.334481 TGTCGACAAGAAGGGAAGAAAAAC 59.666 41.667 17.62 0.00 0.00 2.43
230 241 4.519213 TGTCGACAAGAAGGGAAGAAAAA 58.481 39.130 17.62 0.00 0.00 1.94
238 249 1.738099 CCGCTGTCGACAAGAAGGG 60.738 63.158 20.49 15.15 38.10 3.95
239 250 2.383527 GCCGCTGTCGACAAGAAGG 61.384 63.158 20.49 19.13 38.10 3.46
240 251 2.720758 CGCCGCTGTCGACAAGAAG 61.721 63.158 20.49 8.96 38.10 2.85
250 261 4.783621 ATCATGCACCGCCGCTGT 62.784 61.111 0.00 0.00 0.00 4.40
269 280 1.401905 GGATGGAACTCGATGCAAACC 59.598 52.381 0.00 0.00 0.00 3.27
271 282 2.787473 AGGATGGAACTCGATGCAAA 57.213 45.000 0.00 0.00 0.00 3.68
307 318 3.128589 TCTTTAGCATGAATGAAACGCCC 59.871 43.478 0.00 0.00 0.00 6.13
308 319 4.355543 TCTTTAGCATGAATGAAACGCC 57.644 40.909 0.00 0.00 0.00 5.68
309 320 5.631026 TCTTCTTTAGCATGAATGAAACGC 58.369 37.500 0.00 0.00 0.00 4.84
310 321 7.521529 TCTTCTTCTTTAGCATGAATGAAACG 58.478 34.615 0.00 0.00 0.00 3.60
311 322 9.339492 CTTCTTCTTCTTTAGCATGAATGAAAC 57.661 33.333 0.00 0.00 0.00 2.78
312 323 9.288576 TCTTCTTCTTCTTTAGCATGAATGAAA 57.711 29.630 0.00 0.00 0.00 2.69
313 324 8.853077 TCTTCTTCTTCTTTAGCATGAATGAA 57.147 30.769 0.00 0.00 0.00 2.57
314 325 8.853077 TTCTTCTTCTTCTTTAGCATGAATGA 57.147 30.769 0.00 0.00 0.00 2.57
315 326 8.944029 TCTTCTTCTTCTTCTTTAGCATGAATG 58.056 33.333 0.00 0.00 0.00 2.67
316 327 9.512588 TTCTTCTTCTTCTTCTTTAGCATGAAT 57.487 29.630 0.00 0.00 0.00 2.57
317 328 8.908786 TTCTTCTTCTTCTTCTTTAGCATGAA 57.091 30.769 0.00 0.00 0.00 2.57
318 329 8.370940 TCTTCTTCTTCTTCTTCTTTAGCATGA 58.629 33.333 0.00 0.00 0.00 3.07
319 330 8.545229 TCTTCTTCTTCTTCTTCTTTAGCATG 57.455 34.615 0.00 0.00 0.00 4.06
320 331 9.218440 CTTCTTCTTCTTCTTCTTCTTTAGCAT 57.782 33.333 0.00 0.00 0.00 3.79
321 332 8.424918 TCTTCTTCTTCTTCTTCTTCTTTAGCA 58.575 33.333 0.00 0.00 0.00 3.49
322 333 8.825667 TCTTCTTCTTCTTCTTCTTCTTTAGC 57.174 34.615 0.00 0.00 0.00 3.09
325 336 9.546428 CTTCTCTTCTTCTTCTTCTTCTTCTTT 57.454 33.333 0.00 0.00 0.00 2.52
326 337 7.657354 GCTTCTCTTCTTCTTCTTCTTCTTCTT 59.343 37.037 0.00 0.00 0.00 2.52
327 338 7.154656 GCTTCTCTTCTTCTTCTTCTTCTTCT 58.845 38.462 0.00 0.00 0.00 2.85
328 339 6.089417 CGCTTCTCTTCTTCTTCTTCTTCTTC 59.911 42.308 0.00 0.00 0.00 2.87
329 340 5.925969 CGCTTCTCTTCTTCTTCTTCTTCTT 59.074 40.000 0.00 0.00 0.00 2.52
330 341 5.469479 CGCTTCTCTTCTTCTTCTTCTTCT 58.531 41.667 0.00 0.00 0.00 2.85
331 342 4.091365 GCGCTTCTCTTCTTCTTCTTCTTC 59.909 45.833 0.00 0.00 0.00 2.87
332 343 3.993736 GCGCTTCTCTTCTTCTTCTTCTT 59.006 43.478 0.00 0.00 0.00 2.52
333 344 3.258123 AGCGCTTCTCTTCTTCTTCTTCT 59.742 43.478 2.64 0.00 0.00 2.85
334 345 3.584834 AGCGCTTCTCTTCTTCTTCTTC 58.415 45.455 2.64 0.00 0.00 2.87
335 346 3.584834 GAGCGCTTCTCTTCTTCTTCTT 58.415 45.455 13.26 0.00 38.78 2.52
336 347 2.094234 GGAGCGCTTCTCTTCTTCTTCT 60.094 50.000 13.26 0.00 41.60 2.85
337 348 2.267426 GGAGCGCTTCTCTTCTTCTTC 58.733 52.381 13.26 0.00 41.60 2.87
338 349 1.066502 GGGAGCGCTTCTCTTCTTCTT 60.067 52.381 16.97 0.00 41.60 2.52
339 350 0.534873 GGGAGCGCTTCTCTTCTTCT 59.465 55.000 16.97 0.00 41.60 2.85
340 351 0.534873 AGGGAGCGCTTCTCTTCTTC 59.465 55.000 16.97 0.00 41.60 2.87
341 352 0.980423 AAGGGAGCGCTTCTCTTCTT 59.020 50.000 16.97 7.41 43.29 2.52
342 353 0.980423 AAAGGGAGCGCTTCTCTTCT 59.020 50.000 16.97 0.20 46.10 2.85
343 354 1.735018 GAAAAGGGAGCGCTTCTCTTC 59.265 52.381 16.97 13.04 46.10 2.87
345 356 0.390472 CGAAAAGGGAGCGCTTCTCT 60.390 55.000 16.97 9.57 38.68 3.10
346 357 1.362406 CCGAAAAGGGAGCGCTTCTC 61.362 60.000 16.97 7.16 41.15 2.87
347 358 1.376037 CCGAAAAGGGAGCGCTTCT 60.376 57.895 16.97 12.00 35.97 2.85
348 359 1.636570 GACCGAAAAGGGAGCGCTTC 61.637 60.000 13.26 10.24 46.96 3.86
349 360 1.671379 GACCGAAAAGGGAGCGCTT 60.671 57.895 13.26 0.00 46.96 4.68
350 361 2.047179 GACCGAAAAGGGAGCGCT 60.047 61.111 11.27 11.27 46.96 5.92
351 362 3.488090 CGACCGAAAAGGGAGCGC 61.488 66.667 0.00 0.00 46.96 5.92
352 363 2.048503 ACGACCGAAAAGGGAGCG 60.049 61.111 0.00 0.00 46.96 5.03
353 364 0.601841 TTGACGACCGAAAAGGGAGC 60.602 55.000 0.00 0.00 46.96 4.70
354 365 1.145803 GTTGACGACCGAAAAGGGAG 58.854 55.000 0.00 0.00 46.96 4.30
355 366 0.754472 AGTTGACGACCGAAAAGGGA 59.246 50.000 0.00 0.00 46.96 4.20
356 367 1.263217 CAAGTTGACGACCGAAAAGGG 59.737 52.381 0.00 0.00 46.96 3.95
358 369 2.849502 GCACAAGTTGACGACCGAAAAG 60.850 50.000 10.54 0.00 0.00 2.27
359 370 1.062880 GCACAAGTTGACGACCGAAAA 59.937 47.619 10.54 0.00 0.00 2.29
360 371 0.653636 GCACAAGTTGACGACCGAAA 59.346 50.000 10.54 0.00 0.00 3.46
361 372 0.179094 AGCACAAGTTGACGACCGAA 60.179 50.000 10.54 0.00 0.00 4.30
362 373 0.596600 GAGCACAAGTTGACGACCGA 60.597 55.000 10.54 0.00 0.00 4.69
366 377 5.050363 GTGAAAATAGAGCACAAGTTGACGA 60.050 40.000 10.54 0.00 32.96 4.20
385 396 3.742369 GTCCGGAATTACTTGTCGTGAAA 59.258 43.478 5.23 0.00 0.00 2.69
386 397 3.243805 TGTCCGGAATTACTTGTCGTGAA 60.244 43.478 5.23 0.00 0.00 3.18
387 398 2.296752 TGTCCGGAATTACTTGTCGTGA 59.703 45.455 5.23 0.00 0.00 4.35
388 399 2.666508 CTGTCCGGAATTACTTGTCGTG 59.333 50.000 5.23 0.00 0.00 4.35
389 400 2.559668 TCTGTCCGGAATTACTTGTCGT 59.440 45.455 5.23 0.00 0.00 4.34
391 402 3.194968 TCCTCTGTCCGGAATTACTTGTC 59.805 47.826 5.23 0.00 0.00 3.18
392 403 3.170717 TCCTCTGTCCGGAATTACTTGT 58.829 45.455 5.23 0.00 0.00 3.16
395 406 3.195825 CACTTCCTCTGTCCGGAATTACT 59.804 47.826 5.23 0.00 39.64 2.24
396 407 3.522553 CACTTCCTCTGTCCGGAATTAC 58.477 50.000 5.23 0.00 39.64 1.89
397 408 2.500098 CCACTTCCTCTGTCCGGAATTA 59.500 50.000 5.23 0.00 39.64 1.40
398 409 1.279271 CCACTTCCTCTGTCCGGAATT 59.721 52.381 5.23 0.00 39.64 2.17
400 411 0.178944 TCCACTTCCTCTGTCCGGAA 60.179 55.000 5.23 0.00 38.18 4.30
403 414 1.216710 GCTCCACTTCCTCTGTCCG 59.783 63.158 0.00 0.00 0.00 4.79
404 415 0.980423 AAGCTCCACTTCCTCTGTCC 59.020 55.000 0.00 0.00 30.77 4.02
406 417 1.622811 CTCAAGCTCCACTTCCTCTGT 59.377 52.381 0.00 0.00 36.04 3.41
408 419 1.899142 GACTCAAGCTCCACTTCCTCT 59.101 52.381 0.00 0.00 36.04 3.69
409 420 1.066502 GGACTCAAGCTCCACTTCCTC 60.067 57.143 0.00 0.00 36.04 3.71
410 421 0.980423 GGACTCAAGCTCCACTTCCT 59.020 55.000 0.00 0.00 36.04 3.36
411 422 0.980423 AGGACTCAAGCTCCACTTCC 59.020 55.000 0.00 0.00 36.04 3.46
412 423 2.421619 CAAGGACTCAAGCTCCACTTC 58.578 52.381 0.00 0.00 36.04 3.01
413 424 1.544314 GCAAGGACTCAAGCTCCACTT 60.544 52.381 0.00 0.00 40.05 3.16
414 425 0.036022 GCAAGGACTCAAGCTCCACT 59.964 55.000 0.00 0.00 0.00 4.00
415 426 0.036022 AGCAAGGACTCAAGCTCCAC 59.964 55.000 0.00 0.00 30.05 4.02
423 1978 3.008375 AGTGCAATAGAAGCAAGGACTCA 59.992 43.478 0.00 0.00 44.64 3.41
425 1980 3.244700 ACAGTGCAATAGAAGCAAGGACT 60.245 43.478 0.00 0.00 44.64 3.85
428 1983 2.094894 CGACAGTGCAATAGAAGCAAGG 59.905 50.000 0.00 0.00 44.64 3.61
466 2021 4.193826 TCACTCTTCTATTGCACTGTCC 57.806 45.455 0.00 0.00 0.00 4.02
494 2049 3.119209 GGGGTACAGTAAGGAAGAACTCG 60.119 52.174 0.00 0.00 0.00 4.18
499 2054 1.188863 GCGGGGTACAGTAAGGAAGA 58.811 55.000 0.00 0.00 0.00 2.87
523 2078 0.507358 GTGTTCAACGAGGCGAAGAC 59.493 55.000 0.00 0.00 0.00 3.01
524 2079 2.895039 GTGTTCAACGAGGCGAAGA 58.105 52.632 0.00 0.00 0.00 2.87
617 2172 0.108424 ATGCTGCGAGACAAGAGGAC 60.108 55.000 0.00 0.00 0.00 3.85
618 2173 1.135139 GTATGCTGCGAGACAAGAGGA 59.865 52.381 0.00 0.00 0.00 3.71
641 2196 2.761767 TCTGTATGGCTAGCCGTTTGTA 59.238 45.455 32.78 13.02 39.42 2.41
643 2198 2.309528 TCTGTATGGCTAGCCGTTTG 57.690 50.000 32.78 21.39 39.42 2.93
645 2200 1.831736 ACTTCTGTATGGCTAGCCGTT 59.168 47.619 32.78 22.28 39.42 4.44
646 2201 1.486211 ACTTCTGTATGGCTAGCCGT 58.514 50.000 30.66 30.66 39.42 5.68
647 2202 2.604046 AACTTCTGTATGGCTAGCCG 57.396 50.000 28.28 13.99 39.42 5.52
648 2203 4.123506 GAGAAACTTCTGTATGGCTAGCC 58.876 47.826 27.71 27.71 37.73 3.93
650 2205 6.463995 AGAGAGAAACTTCTGTATGGCTAG 57.536 41.667 0.00 0.00 37.73 3.42
652 2207 6.609212 TCATAGAGAGAAACTTCTGTATGGCT 59.391 38.462 15.71 0.00 44.95 4.75
653 2208 6.810911 TCATAGAGAGAAACTTCTGTATGGC 58.189 40.000 15.71 0.00 44.95 4.40
675 2247 7.067615 TGGCTGTGTAGAAAAACAAACTTATCA 59.932 33.333 0.00 0.00 0.00 2.15
676 2248 7.422399 TGGCTGTGTAGAAAAACAAACTTATC 58.578 34.615 0.00 0.00 0.00 1.75
680 2252 5.127031 ACATGGCTGTGTAGAAAAACAAACT 59.873 36.000 0.00 0.00 33.22 2.66
681 2253 5.231991 CACATGGCTGTGTAGAAAAACAAAC 59.768 40.000 0.00 0.00 46.33 2.93
682 2254 5.347342 CACATGGCTGTGTAGAAAAACAAA 58.653 37.500 0.00 0.00 46.33 2.83
684 2256 4.566545 CACATGGCTGTGTAGAAAAACA 57.433 40.909 0.00 0.00 46.33 2.83
724 2306 8.423349 ACCAAATCTTCACATGATTCTCAAAAA 58.577 29.630 0.00 0.00 33.54 1.94
725 2307 7.954835 ACCAAATCTTCACATGATTCTCAAAA 58.045 30.769 0.00 0.00 33.54 2.44
726 2308 7.528996 ACCAAATCTTCACATGATTCTCAAA 57.471 32.000 0.00 0.00 33.54 2.69
727 2309 7.528996 AACCAAATCTTCACATGATTCTCAA 57.471 32.000 0.00 0.00 33.54 3.02
728 2310 7.528996 AAACCAAATCTTCACATGATTCTCA 57.471 32.000 0.00 0.00 33.54 3.27
729 2311 8.302438 AGAAAACCAAATCTTCACATGATTCTC 58.698 33.333 0.00 0.00 33.54 2.87
730 2312 8.086522 CAGAAAACCAAATCTTCACATGATTCT 58.913 33.333 0.00 0.00 33.54 2.40
731 2313 8.084073 TCAGAAAACCAAATCTTCACATGATTC 58.916 33.333 0.00 0.00 33.54 2.52
732 2314 7.954835 TCAGAAAACCAAATCTTCACATGATT 58.045 30.769 0.00 0.00 35.88 2.57
733 2315 7.309621 CCTCAGAAAACCAAATCTTCACATGAT 60.310 37.037 0.00 0.00 0.00 2.45
734 2316 6.016024 CCTCAGAAAACCAAATCTTCACATGA 60.016 38.462 0.00 0.00 0.00 3.07
735 2317 6.016024 TCCTCAGAAAACCAAATCTTCACATG 60.016 38.462 0.00 0.00 0.00 3.21
736 2318 6.070656 TCCTCAGAAAACCAAATCTTCACAT 58.929 36.000 0.00 0.00 0.00 3.21
737 2319 5.445069 TCCTCAGAAAACCAAATCTTCACA 58.555 37.500 0.00 0.00 0.00 3.58
738 2320 6.391227 TTCCTCAGAAAACCAAATCTTCAC 57.609 37.500 0.00 0.00 0.00 3.18
739 2321 7.416964 TTTTCCTCAGAAAACCAAATCTTCA 57.583 32.000 0.00 0.00 44.99 3.02
751 2333 2.362077 GCTTGGCTGTTTTCCTCAGAAA 59.638 45.455 0.00 0.00 40.26 2.52
752 2334 1.956477 GCTTGGCTGTTTTCCTCAGAA 59.044 47.619 0.00 0.00 35.20 3.02
753 2335 1.609208 GCTTGGCTGTTTTCCTCAGA 58.391 50.000 0.00 0.00 35.20 3.27
754 2336 0.239347 CGCTTGGCTGTTTTCCTCAG 59.761 55.000 0.00 0.00 36.18 3.35
755 2337 0.179032 TCGCTTGGCTGTTTTCCTCA 60.179 50.000 0.00 0.00 0.00 3.86
756 2338 0.951558 TTCGCTTGGCTGTTTTCCTC 59.048 50.000 0.00 0.00 0.00 3.71
757 2339 0.954452 CTTCGCTTGGCTGTTTTCCT 59.046 50.000 0.00 0.00 0.00 3.36
758 2340 0.664466 GCTTCGCTTGGCTGTTTTCC 60.664 55.000 0.00 0.00 0.00 3.13
759 2341 0.664466 GGCTTCGCTTGGCTGTTTTC 60.664 55.000 0.00 0.00 0.00 2.29
760 2342 1.363807 GGCTTCGCTTGGCTGTTTT 59.636 52.632 0.00 0.00 0.00 2.43
761 2343 2.564721 GGGCTTCGCTTGGCTGTTT 61.565 57.895 0.00 0.00 0.00 2.83
762 2344 2.985847 GGGCTTCGCTTGGCTGTT 60.986 61.111 0.00 0.00 0.00 3.16
763 2345 4.269523 TGGGCTTCGCTTGGCTGT 62.270 61.111 0.00 0.00 0.00 4.40
766 2348 1.674322 TAACTGGGCTTCGCTTGGC 60.674 57.895 0.00 0.00 0.00 4.52
770 2352 2.669240 GGGTAACTGGGCTTCGCT 59.331 61.111 0.00 0.00 0.00 4.93
793 2375 3.508840 CGCGGGCCATCCTTTGAC 61.509 66.667 4.39 0.00 0.00 3.18
811 2393 4.093291 AGCCCAGCTTCGCAGGAG 62.093 66.667 4.67 0.00 37.40 3.69
833 2415 2.282887 TTCCTTTTCCCCGGCAGC 60.283 61.111 0.00 0.00 0.00 5.25
839 2421 0.634465 TATGGGCCTTCCTTTTCCCC 59.366 55.000 4.53 0.00 37.97 4.81
842 2424 3.054361 TGAGACTATGGGCCTTCCTTTTC 60.054 47.826 4.53 0.00 36.20 2.29
848 2430 0.530870 GCGTGAGACTATGGGCCTTC 60.531 60.000 4.53 0.00 0.00 3.46
851 2433 0.601311 GATGCGTGAGACTATGGGCC 60.601 60.000 0.00 0.00 0.00 5.80
857 2439 0.393944 ACCGGAGATGCGTGAGACTA 60.394 55.000 9.46 0.00 0.00 2.59
859 2441 1.226717 GACCGGAGATGCGTGAGAC 60.227 63.158 9.46 0.00 0.00 3.36
876 2458 1.964373 GGAAAGAAAGCGCCGTGGA 60.964 57.895 2.29 0.00 0.00 4.02
882 2464 1.922545 GCAATGATGGAAAGAAAGCGC 59.077 47.619 0.00 0.00 0.00 5.92
920 2503 3.431725 GAAAGACGGCGCCCCTTG 61.432 66.667 23.46 9.53 0.00 3.61
922 2505 4.083862 GAGAAAGACGGCGCCCCT 62.084 66.667 23.46 15.92 0.00 4.79
1252 2846 2.284151 GACCTCCTCCTCCTCCCC 59.716 72.222 0.00 0.00 0.00 4.81
1253 2847 1.075600 CTGACCTCCTCCTCCTCCC 60.076 68.421 0.00 0.00 0.00 4.30
1254 2848 1.075600 CCTGACCTCCTCCTCCTCC 60.076 68.421 0.00 0.00 0.00 4.30
1255 2849 1.075600 CCCTGACCTCCTCCTCCTC 60.076 68.421 0.00 0.00 0.00 3.71
1525 3119 1.905637 TCTAGCACGAGGTTGAGTCA 58.094 50.000 0.00 0.00 0.00 3.41
1526 3120 3.512033 AATCTAGCACGAGGTTGAGTC 57.488 47.619 2.74 0.00 31.03 3.36
1527 3121 3.963428 AAATCTAGCACGAGGTTGAGT 57.037 42.857 2.74 0.00 31.03 3.41
1530 3124 5.119588 TCGTTAAAAATCTAGCACGAGGTTG 59.880 40.000 0.00 0.00 33.07 3.77
1545 3139 9.892987 CGCAATGCAATATATTTTCGTTAAAAA 57.107 25.926 5.91 0.00 40.98 1.94
1547 3146 8.621921 ACGCAATGCAATATATTTTCGTTAAA 57.378 26.923 5.91 0.00 0.00 1.52
1589 3190 9.517609 AAGCACTCTAAATACGACTGTAAATAG 57.482 33.333 0.00 0.00 33.44 1.73
1593 3194 6.916440 TCAAGCACTCTAAATACGACTGTAA 58.084 36.000 0.00 0.00 33.44 2.41
1594 3195 6.150641 ACTCAAGCACTCTAAATACGACTGTA 59.849 38.462 0.00 0.00 34.45 2.74
1595 3196 5.047943 ACTCAAGCACTCTAAATACGACTGT 60.048 40.000 0.00 0.00 0.00 3.55
1596 3197 5.403246 ACTCAAGCACTCTAAATACGACTG 58.597 41.667 0.00 0.00 0.00 3.51
1597 3198 5.646577 ACTCAAGCACTCTAAATACGACT 57.353 39.130 0.00 0.00 0.00 4.18
1598 3199 5.634020 ACAACTCAAGCACTCTAAATACGAC 59.366 40.000 0.00 0.00 0.00 4.34
1599 3200 5.779922 ACAACTCAAGCACTCTAAATACGA 58.220 37.500 0.00 0.00 0.00 3.43
1600 3201 6.467723 AACAACTCAAGCACTCTAAATACG 57.532 37.500 0.00 0.00 0.00 3.06
1631 3237 9.005777 AGCATTGCAAGAACATGAATAATTTTT 57.994 25.926 11.91 0.00 0.00 1.94
1632 3238 8.556213 AGCATTGCAAGAACATGAATAATTTT 57.444 26.923 11.91 0.00 0.00 1.82
1633 3239 9.090692 GTAGCATTGCAAGAACATGAATAATTT 57.909 29.630 11.91 0.00 0.00 1.82
1634 3240 8.472413 AGTAGCATTGCAAGAACATGAATAATT 58.528 29.630 11.91 0.00 0.00 1.40
1635 3241 8.004087 AGTAGCATTGCAAGAACATGAATAAT 57.996 30.769 11.91 0.00 0.00 1.28
1652 3274 6.659242 ACTGCTAACCATACAAAAGTAGCATT 59.341 34.615 3.85 0.00 38.42 3.56
1663 3285 1.349357 TGGTGCACTGCTAACCATACA 59.651 47.619 17.98 0.00 39.05 2.29
1693 6188 4.757149 CAGAAATCCTGGTCGAGTTTCTTT 59.243 41.667 0.00 0.00 37.10 2.52
1775 6271 8.745590 GTTGTTATATTACCCCTTCACAATTGT 58.254 33.333 4.92 4.92 0.00 2.71
1780 6276 8.943594 AAAAGTTGTTATATTACCCCTTCACA 57.056 30.769 0.00 0.00 0.00 3.58
1809 6305 6.183360 TGTGCAAAAAGAATTAAGCCTGGTAA 60.183 34.615 0.00 0.00 0.00 2.85
1840 6337 2.723658 TGTGCAAAATCGTTCATTTCGC 59.276 40.909 0.00 0.00 33.16 4.70
1841 6338 3.728221 TGTGTGCAAAATCGTTCATTTCG 59.272 39.130 0.00 0.00 33.16 3.46
1851 6348 3.715495 TGGATTGTGTGTGTGCAAAATC 58.285 40.909 0.00 0.00 0.00 2.17
1940 6678 1.474077 GGTAAACAGGGAGCATGCTTG 59.526 52.381 23.61 18.62 40.07 4.01
1943 6681 0.323360 TGGGTAAACAGGGAGCATGC 60.323 55.000 10.51 10.51 0.00 4.06
1979 6717 4.935205 TCACATGATTACTTTTCCAGTCCG 59.065 41.667 0.00 0.00 36.88 4.79
2060 7019 8.421249 AATTTGATCTGATTTCCCTTAACACA 57.579 30.769 0.00 0.00 0.00 3.72
2075 7036 8.997621 ATTCATCCAGAAACAAATTTGATCTG 57.002 30.769 30.48 30.48 40.22 2.90
2111 7073 1.055338 GCAATTCAACTCGTGCAAGC 58.945 50.000 0.00 0.00 36.97 4.01
2112 7074 2.578495 GAGCAATTCAACTCGTGCAAG 58.422 47.619 0.00 0.00 39.50 4.01
2113 7075 1.266718 GGAGCAATTCAACTCGTGCAA 59.733 47.619 0.00 0.00 39.50 4.08
2118 7080 3.308530 GGTTTTGGAGCAATTCAACTCG 58.691 45.455 0.00 0.00 33.55 4.18
2119 7081 3.554960 GGGGTTTTGGAGCAATTCAACTC 60.555 47.826 0.00 0.00 0.00 3.01
2136 7098 2.893489 GCATTGTCTTTCTTCAGGGGTT 59.107 45.455 0.00 0.00 0.00 4.11
2144 7106 2.165998 GGAGCCAGCATTGTCTTTCTT 58.834 47.619 0.00 0.00 0.00 2.52
2149 7111 1.630369 TGTAAGGAGCCAGCATTGTCT 59.370 47.619 0.00 0.00 0.00 3.41
2168 7130 4.201891 GCATACTGCTCTCTTGGTTGAATG 60.202 45.833 0.00 0.00 40.96 2.67
2184 7146 5.885230 TCTTGAACCAGAAATGCATACTG 57.115 39.130 20.15 20.15 0.00 2.74
2337 7299 0.320771 AGCACCAGTAGCAAACGAGG 60.321 55.000 0.00 0.00 35.15 4.63
2340 7302 4.158384 CAAAATAGCACCAGTAGCAAACG 58.842 43.478 0.00 0.00 0.00 3.60
2370 7336 5.934043 GGAAATTCAAAGAAACAATCCTGGG 59.066 40.000 0.00 0.00 0.00 4.45
2375 7341 9.474920 TGTATGTGGAAATTCAAAGAAACAATC 57.525 29.630 0.00 0.00 0.00 2.67
2376 7342 9.480053 CTGTATGTGGAAATTCAAAGAAACAAT 57.520 29.630 0.00 0.00 0.00 2.71
2392 7358 9.845740 AATGTTAAATGCTATACTGTATGTGGA 57.154 29.630 10.51 5.18 0.00 4.02
2420 7386 1.728971 AGCGCAACTCAAAAGAGATCG 59.271 47.619 11.47 1.47 0.00 3.69
2443 7409 6.713762 TTAACATCCCATAATGCCAAGAAG 57.286 37.500 0.00 0.00 0.00 2.85
2477 7443 4.421365 TGGAATGACCAGCAAGGC 57.579 55.556 0.00 0.00 44.64 4.35
2489 7457 5.975988 TCTAACTCCCTGCTAATTGGAAT 57.024 39.130 0.00 0.00 0.00 3.01
2491 7459 4.968719 TCATCTAACTCCCTGCTAATTGGA 59.031 41.667 0.00 0.00 0.00 3.53
2497 7465 3.463704 TCTCCTCATCTAACTCCCTGCTA 59.536 47.826 0.00 0.00 0.00 3.49
2580 7548 2.949177 TTCCATGTAAGTGTGCAGGT 57.051 45.000 0.00 0.00 0.00 4.00
2590 7558 4.518970 GTCTGCTCCTTGTTTTCCATGTAA 59.481 41.667 0.00 0.00 0.00 2.41
2638 7606 7.642194 GTCTACTTCTTGAGATAACACTCGATG 59.358 40.741 0.00 0.00 39.49 3.84
2647 7615 5.854010 ATGGCGTCTACTTCTTGAGATAA 57.146 39.130 0.00 0.00 0.00 1.75
2666 7634 8.522830 TCTAATTGAAAAGTGCCTAGAAAATGG 58.477 33.333 0.00 0.00 0.00 3.16
2684 7652 5.772393 ACACCAACTACCCATCTAATTGA 57.228 39.130 0.00 0.00 0.00 2.57
2685 7653 6.834168 AAACACCAACTACCCATCTAATTG 57.166 37.500 0.00 0.00 0.00 2.32
2687 7655 6.596497 CGTAAAACACCAACTACCCATCTAAT 59.404 38.462 0.00 0.00 0.00 1.73
2689 7657 5.245751 TCGTAAAACACCAACTACCCATCTA 59.754 40.000 0.00 0.00 0.00 1.98
2690 7658 4.040706 TCGTAAAACACCAACTACCCATCT 59.959 41.667 0.00 0.00 0.00 2.90
2691 7659 4.317488 TCGTAAAACACCAACTACCCATC 58.683 43.478 0.00 0.00 0.00 3.51
2692 7660 4.354893 TCGTAAAACACCAACTACCCAT 57.645 40.909 0.00 0.00 0.00 4.00
2694 7662 3.499537 CCTTCGTAAAACACCAACTACCC 59.500 47.826 0.00 0.00 0.00 3.69
2695 7663 4.129380 ACCTTCGTAAAACACCAACTACC 58.871 43.478 0.00 0.00 0.00 3.18
2696 7664 5.739752 AACCTTCGTAAAACACCAACTAC 57.260 39.130 0.00 0.00 0.00 2.73
2712 7682 3.057806 CCCAATCCGTTTGTGTAACCTTC 60.058 47.826 0.00 0.00 34.36 3.46
2716 7687 3.504520 ACATCCCAATCCGTTTGTGTAAC 59.495 43.478 0.00 0.00 33.15 2.50
2718 7689 3.426787 ACATCCCAATCCGTTTGTGTA 57.573 42.857 0.00 0.00 33.15 2.90
2727 7698 1.474077 GCTGTCACAACATCCCAATCC 59.526 52.381 0.00 0.00 34.13 3.01
2728 7699 2.161855 TGCTGTCACAACATCCCAATC 58.838 47.619 0.00 0.00 34.13 2.67
2742 7713 4.632153 TGAAAGAGTAAGGACTTGCTGTC 58.368 43.478 7.40 3.54 44.63 3.51
2756 7733 1.532868 GCACGTTGCATCTGAAAGAGT 59.467 47.619 5.30 0.00 44.26 3.24
2769 7746 1.266446 TGGATCACATTGTGCACGTTG 59.734 47.619 13.13 14.30 32.98 4.10
2771 7748 1.159285 CTGGATCACATTGTGCACGT 58.841 50.000 13.13 0.55 32.98 4.49
2772 7749 0.448990 CCTGGATCACATTGTGCACG 59.551 55.000 13.13 0.00 32.98 5.34
2776 7765 3.354948 TCTTCCCTGGATCACATTGTG 57.645 47.619 10.64 10.64 34.45 3.33
2811 7800 4.157289 CCTGGAAATTCTGTTGACATCCAG 59.843 45.833 17.73 17.73 41.16 3.86
2820 7809 7.233348 ACACATTCAATACCTGGAAATTCTGTT 59.767 33.333 0.00 0.00 0.00 3.16
2826 7815 6.267471 ACACAACACATTCAATACCTGGAAAT 59.733 34.615 0.00 0.00 0.00 2.17
2839 7828 3.500680 ACCCGTGATAACACAACACATTC 59.499 43.478 3.88 0.00 46.20 2.67
2845 7834 1.231221 TGCACCCGTGATAACACAAC 58.769 50.000 3.88 0.00 46.20 3.32
2848 7837 5.163992 CGAATATATGCACCCGTGATAACAC 60.164 44.000 0.00 0.00 42.88 3.32
2849 7838 4.926832 CGAATATATGCACCCGTGATAACA 59.073 41.667 0.00 0.00 0.00 2.41
2860 7850 3.386486 TGGTTCGTCCGAATATATGCAC 58.614 45.455 5.33 0.00 39.52 4.57
2861 7851 3.737032 TGGTTCGTCCGAATATATGCA 57.263 42.857 5.33 0.00 39.52 3.96
2872 7862 0.788391 CGCAGTAACTTGGTTCGTCC 59.212 55.000 0.00 0.00 0.00 4.79
2889 7879 2.423898 TACTGGTGGCTAGGCTCGC 61.424 63.158 18.18 1.76 0.00 5.03
2890 7880 1.038130 AGTACTGGTGGCTAGGCTCG 61.038 60.000 18.18 4.90 0.00 5.03
2914 7904 2.804697 TGTACTTACTTGCTCACGCA 57.195 45.000 0.00 0.00 46.24 5.24
2915 7905 3.725010 GCAATGTACTTACTTGCTCACGC 60.725 47.826 12.59 0.00 41.52 5.34
2916 7906 3.431912 TGCAATGTACTTACTTGCTCACG 59.568 43.478 17.50 0.00 44.29 4.35
2917 7907 4.666655 CGTGCAATGTACTTACTTGCTCAC 60.667 45.833 17.50 10.99 44.29 3.51
2918 7908 3.431912 CGTGCAATGTACTTACTTGCTCA 59.568 43.478 17.50 3.41 44.29 4.26
2919 7909 3.181520 CCGTGCAATGTACTTACTTGCTC 60.182 47.826 17.50 14.45 44.29 4.26
2920 7910 2.742053 CCGTGCAATGTACTTACTTGCT 59.258 45.455 17.50 0.00 44.29 3.91
2921 7911 2.727916 GCCGTGCAATGTACTTACTTGC 60.728 50.000 12.83 12.83 44.25 4.01
2922 7912 2.742053 AGCCGTGCAATGTACTTACTTG 59.258 45.455 0.00 0.00 0.00 3.16
2923 7913 2.742053 CAGCCGTGCAATGTACTTACTT 59.258 45.455 0.00 0.00 0.00 2.24
2924 7914 2.346803 CAGCCGTGCAATGTACTTACT 58.653 47.619 0.00 0.00 0.00 2.24
2925 7915 2.806288 CAGCCGTGCAATGTACTTAC 57.194 50.000 0.00 0.00 0.00 2.34
2951 7941 4.683400 CGACAGTGCAATATAAGTTCCCCT 60.683 45.833 0.00 0.00 0.00 4.79
2954 7944 4.026804 CGTCGACAGTGCAATATAAGTTCC 60.027 45.833 17.16 0.00 0.00 3.62
2955 7945 4.548346 GCGTCGACAGTGCAATATAAGTTC 60.548 45.833 17.16 0.00 0.00 3.01
2956 7946 3.306166 GCGTCGACAGTGCAATATAAGTT 59.694 43.478 17.16 0.00 0.00 2.66
2957 7947 2.858344 GCGTCGACAGTGCAATATAAGT 59.142 45.455 17.16 0.00 0.00 2.24
2958 7948 2.097877 CGCGTCGACAGTGCAATATAAG 60.098 50.000 17.16 0.00 0.00 1.73
2959 7949 1.849829 CGCGTCGACAGTGCAATATAA 59.150 47.619 17.16 0.00 0.00 0.98
2960 7950 1.472990 CGCGTCGACAGTGCAATATA 58.527 50.000 17.16 0.00 0.00 0.86
2962 7952 2.441378 GCGCGTCGACAGTGCAATA 61.441 57.895 28.26 0.00 43.84 1.90
2963 7953 3.777925 GCGCGTCGACAGTGCAAT 61.778 61.111 28.26 0.00 43.84 3.56
2967 7957 2.354763 TTTTGTGCGCGTCGACAGTG 62.355 55.000 17.16 15.26 0.00 3.66
2968 7958 1.495584 ATTTTGTGCGCGTCGACAGT 61.496 50.000 17.16 0.00 0.00 3.55
2969 7959 1.054348 CATTTTGTGCGCGTCGACAG 61.054 55.000 17.16 10.00 0.00 3.51
2970 7960 1.083080 CATTTTGTGCGCGTCGACA 60.083 52.632 17.16 5.76 0.00 4.35
2971 7961 2.417553 GCATTTTGTGCGCGTCGAC 61.418 57.895 8.43 5.18 45.23 4.20
2981 7971 0.251787 GGAGGGTCCCTGCATTTTGT 60.252 55.000 23.99 0.00 41.77 2.83
2982 7972 2.583472 GGAGGGTCCCTGCATTTTG 58.417 57.895 23.99 0.00 41.77 2.44
2993 8060 2.993853 CTGCTTCCAGGGAGGGTC 59.006 66.667 0.00 0.00 38.24 4.46
3007 8074 2.725221 AGGAACTCCATCAATCCTGC 57.275 50.000 0.00 0.00 40.73 4.85
3016 8083 5.104485 GGATTGGTACTGTAAGGAACTCCAT 60.104 44.000 0.00 0.00 33.36 3.41
3058 8125 2.420058 ATGGCTAGCTGTTTGTACCC 57.580 50.000 15.72 0.00 0.00 3.69
3096 8163 0.337428 AAGGGCTGAAGGCATGGATT 59.663 50.000 6.20 0.00 44.01 3.01
3099 8166 0.612732 TGAAAGGGCTGAAGGCATGG 60.613 55.000 6.20 0.00 44.01 3.66
3124 8191 5.845391 AACCTCTGAAAACGGAAAAATCA 57.155 34.783 0.00 0.00 0.00 2.57
3129 8196 4.784177 ACCTAAACCTCTGAAAACGGAAA 58.216 39.130 0.00 0.00 0.00 3.13
3151 8218 3.222173 ACCCATCAGTTGCTTGTGTTA 57.778 42.857 0.00 0.00 0.00 2.41
3192 8263 7.285401 ACTGTACCAAGATGAAATTCAAGTTGT 59.715 33.333 15.21 6.77 0.00 3.32
3238 8326 4.814234 TGAACTTGCTAACTTAGTGTGTGG 59.186 41.667 0.00 0.00 0.00 4.17
3239 8327 5.984233 TGAACTTGCTAACTTAGTGTGTG 57.016 39.130 0.00 0.00 0.00 3.82
3240 8328 6.995511 TTTGAACTTGCTAACTTAGTGTGT 57.004 33.333 0.00 0.00 0.00 3.72
3241 8329 6.912591 CCTTTTGAACTTGCTAACTTAGTGTG 59.087 38.462 0.00 0.00 0.00 3.82
3270 8358 4.024556 CCTGATGATCGGTTTATGCAGAAC 60.025 45.833 0.00 0.00 0.00 3.01
3285 8373 4.141756 ACGAAGCTGAGAAATCCTGATGAT 60.142 41.667 0.00 0.00 34.22 2.45
3290 8378 3.244033 AGACGAAGCTGAGAAATCCTG 57.756 47.619 0.00 0.00 0.00 3.86
3307 8397 5.476945 ACAAAATGGGTCAATGGAAGTAGAC 59.523 40.000 0.00 0.00 0.00 2.59
3356 8446 1.135527 CGTCAAATCTTGGCATGCCAT 59.864 47.619 38.78 22.79 46.64 4.40
3366 8456 5.335191 GCAATCTTTGGAGTCGTCAAATCTT 60.335 40.000 0.00 0.00 34.19 2.40
3398 8508 4.380531 CAACTTACTTTGCCAGTCTCTCA 58.619 43.478 0.00 0.00 36.88 3.27
3422 8532 0.811281 GGCTATCAACTGGTTGGCAC 59.189 55.000 12.65 2.14 40.78 5.01
3506 8616 2.100605 AAGTCCAAGATGGCGTCTTC 57.899 50.000 18.84 8.57 45.35 2.87
3508 8618 1.625818 AGAAAGTCCAAGATGGCGTCT 59.374 47.619 2.64 2.64 37.47 4.18
3512 8622 7.500559 AGAATATACAAGAAAGTCCAAGATGGC 59.499 37.037 0.00 0.00 37.47 4.40
3542 8652 1.819632 GGCATTCATTCCGACGGCT 60.820 57.895 9.66 0.00 0.00 5.52
3545 8655 1.934589 TGTAGGCATTCATTCCGACG 58.065 50.000 0.00 0.00 31.71 5.12
3549 8659 6.882610 TTATGTCATGTAGGCATTCATTCC 57.117 37.500 0.00 0.00 40.35 3.01
3596 8707 7.839680 ATTTTGATCCCCTATAAATCACACC 57.160 36.000 0.00 0.00 0.00 4.16
3598 8709 9.362151 GGTAATTTTGATCCCCTATAAATCACA 57.638 33.333 0.00 0.00 0.00 3.58
3605 8716 8.518720 TGATGAGGTAATTTTGATCCCCTATA 57.481 34.615 0.00 0.00 0.00 1.31
3606 8717 7.406620 TGATGAGGTAATTTTGATCCCCTAT 57.593 36.000 0.00 0.00 0.00 2.57
3607 8718 6.840090 TGATGAGGTAATTTTGATCCCCTA 57.160 37.500 0.00 0.00 0.00 3.53
3608 8719 5.732331 TGATGAGGTAATTTTGATCCCCT 57.268 39.130 0.00 0.00 0.00 4.79
3609 8720 5.656416 TGTTGATGAGGTAATTTTGATCCCC 59.344 40.000 0.00 0.00 0.00 4.81
3610 8721 6.773976 TGTTGATGAGGTAATTTTGATCCC 57.226 37.500 0.00 0.00 0.00 3.85
3615 8741 9.044150 ACACAAAATGTTGATGAGGTAATTTTG 57.956 29.630 1.62 14.03 44.59 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.