Multiple sequence alignment - TraesCS2A01G507700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G507700 chr2A 100.000 3377 0 0 1 3377 734655231 734651855 0.000000e+00 6237.0
1 TraesCS2A01G507700 chr2A 99.590 244 1 0 677 920 553492519 553492276 2.390000e-121 446.0
2 TraesCS2A01G507700 chr2D 95.386 1517 62 2 919 2435 601264021 601262513 0.000000e+00 2407.0
3 TraesCS2A01G507700 chr2D 81.354 1802 252 34 1413 3191 601255007 601253267 0.000000e+00 1389.0
4 TraesCS2A01G507700 chr2D 94.765 745 37 2 2451 3194 601262533 601261790 0.000000e+00 1158.0
5 TraesCS2A01G507700 chr2D 80.128 468 85 7 966 1427 601255532 601255067 3.230000e-90 342.0
6 TraesCS2A01G507700 chr2D 91.429 105 9 0 3272 3376 601261764 601261660 9.770000e-31 145.0
7 TraesCS2A01G507700 chr2D 94.737 38 0 2 3335 3371 15851039 15851003 1.310000e-04 58.4
8 TraesCS2A01G507700 chr2B 82.081 1797 273 26 966 2717 731482446 731480654 0.000000e+00 1489.0
9 TraesCS2A01G507700 chr2B 89.734 263 20 4 411 670 669495285 669495027 2.510000e-86 329.0
10 TraesCS2A01G507700 chr2B 85.324 293 19 6 1 280 669495819 669495538 7.130000e-72 281.0
11 TraesCS2A01G507700 chr7B 82.403 1415 230 15 964 2367 3540161 3541567 0.000000e+00 1216.0
12 TraesCS2A01G507700 chr7A 81.902 1409 246 8 976 2378 65154751 65153346 0.000000e+00 1181.0
13 TraesCS2A01G507700 chr7A 80.235 1361 259 6 1032 2385 65441925 65443282 0.000000e+00 1014.0
14 TraesCS2A01G507700 chr7D 81.043 1361 248 6 1032 2385 62280171 62281528 0.000000e+00 1075.0
15 TraesCS2A01G507700 chr7D 86.572 283 24 11 1 274 433010206 433010483 1.970000e-77 300.0
16 TraesCS2A01G507700 chr7D 74.020 612 147 7 1125 1733 167546391 167545789 4.350000e-59 239.0
17 TraesCS2A01G507700 chr7D 86.713 143 14 4 412 554 433010695 433010832 1.620000e-33 154.0
18 TraesCS2A01G507700 chr7D 98.305 59 1 0 311 369 433010438 433010496 1.660000e-18 104.0
19 TraesCS2A01G507700 chr3A 99.600 250 1 0 679 928 98833150 98833399 1.100000e-124 457.0
20 TraesCS2A01G507700 chr3A 99.590 244 1 0 677 920 19876362 19876605 2.390000e-121 446.0
21 TraesCS2A01G507700 chr3A 77.222 180 35 6 2048 2224 689500973 689500797 2.140000e-17 100.0
22 TraesCS2A01G507700 chr3A 74.043 235 55 6 2048 2279 689505045 689504814 1.290000e-14 91.6
23 TraesCS2A01G507700 chr6B 99.590 244 1 0 677 920 163959339 163959582 2.390000e-121 446.0
24 TraesCS2A01G507700 chr1A 99.194 248 1 1 677 923 580495306 580495059 2.390000e-121 446.0
25 TraesCS2A01G507700 chr6A 98.800 250 2 1 671 920 601243146 601242898 8.600000e-121 444.0
26 TraesCS2A01G507700 chr5B 99.187 246 2 0 679 924 631480651 631480406 8.600000e-121 444.0
27 TraesCS2A01G507700 chr5A 98.413 252 2 2 671 921 633646324 633646074 3.090000e-120 442.0
28 TraesCS2A01G507700 chr1B 98.406 251 3 1 677 926 392113772 392114022 1.110000e-119 440.0
29 TraesCS2A01G507700 chr1B 88.435 294 15 7 1 280 563555999 563555711 1.500000e-88 337.0
30 TraesCS2A01G507700 chr1B 94.915 59 3 0 311 369 563555709 563555651 3.590000e-15 93.5
31 TraesCS2A01G507700 chr3B 88.502 287 19 6 6 280 803671061 803671345 5.400000e-88 335.0
32 TraesCS2A01G507700 chr3B 88.346 266 19 9 411 670 803671605 803671864 3.270000e-80 309.0
33 TraesCS2A01G507700 chr3B 96.667 60 1 1 311 369 803671347 803671406 7.710000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G507700 chr2A 734651855 734655231 3376 True 6237.000000 6237 100.000000 1 3377 1 chr2A.!!$R2 3376
1 TraesCS2A01G507700 chr2D 601261660 601264021 2361 True 1236.666667 2407 93.860000 919 3376 3 chr2D.!!$R3 2457
2 TraesCS2A01G507700 chr2D 601253267 601255532 2265 True 865.500000 1389 80.741000 966 3191 2 chr2D.!!$R2 2225
3 TraesCS2A01G507700 chr2B 731480654 731482446 1792 True 1489.000000 1489 82.081000 966 2717 1 chr2B.!!$R1 1751
4 TraesCS2A01G507700 chr2B 669495027 669495819 792 True 305.000000 329 87.529000 1 670 2 chr2B.!!$R2 669
5 TraesCS2A01G507700 chr7B 3540161 3541567 1406 False 1216.000000 1216 82.403000 964 2367 1 chr7B.!!$F1 1403
6 TraesCS2A01G507700 chr7A 65153346 65154751 1405 True 1181.000000 1181 81.902000 976 2378 1 chr7A.!!$R1 1402
7 TraesCS2A01G507700 chr7A 65441925 65443282 1357 False 1014.000000 1014 80.235000 1032 2385 1 chr7A.!!$F1 1353
8 TraesCS2A01G507700 chr7D 62280171 62281528 1357 False 1075.000000 1075 81.043000 1032 2385 1 chr7D.!!$F1 1353
9 TraesCS2A01G507700 chr7D 167545789 167546391 602 True 239.000000 239 74.020000 1125 1733 1 chr7D.!!$R1 608
10 TraesCS2A01G507700 chr3B 803671061 803671864 803 False 247.666667 335 91.171667 6 670 3 chr3B.!!$F1 664

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 642 0.027455 CAACGAGAACAAGCGCACAA 59.973 50.0 11.47 0.0 0.00 3.33 F
900 917 0.029834 GAAACCGAGGACGCGCTATA 59.970 55.0 5.73 0.0 38.29 1.31 F
901 918 0.672342 AAACCGAGGACGCGCTATAT 59.328 50.0 5.73 0.0 38.29 0.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1980 2220 0.321830 GCACCTTTTTGGCCATGCAT 60.322 50.0 19.43 0.0 40.22 3.96 R
2217 2457 0.881118 TGTTGCCTTTCTTCATCCGC 59.119 50.0 0.00 0.0 0.00 5.54 R
2864 3194 1.172180 CCTTCGGCCTTTGCACAGAA 61.172 55.0 0.17 0.0 40.13 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.457366 ACAGACCGTGGATTCAGTTC 57.543 50.000 0.00 0.00 0.00 3.01
23 24 3.244561 ACAGACCGTGGATTCAGTTCATT 60.245 43.478 0.00 0.00 0.00 2.57
98 111 3.817084 TCTTGACTGATTTTGGCACTGAG 59.183 43.478 0.00 0.00 0.00 3.35
103 116 2.030371 TGATTTTGGCACTGAGTTGCA 58.970 42.857 8.75 0.00 44.94 4.08
143 156 3.642848 AGGGTTGCAACATGAGTTTCATT 59.357 39.130 29.55 1.06 34.28 2.57
147 160 4.145876 TGCAACATGAGTTTCATTCGTC 57.854 40.909 0.00 0.00 34.28 4.20
213 226 6.029346 AGCAAAGTGGATCAAAAATACAGG 57.971 37.500 0.00 0.00 0.00 4.00
280 296 1.463674 ACGCTAAAGCAAAGATGGGG 58.536 50.000 2.44 0.00 42.21 4.96
281 297 1.004277 ACGCTAAAGCAAAGATGGGGA 59.996 47.619 2.44 0.00 42.21 4.81
282 298 2.091541 CGCTAAAGCAAAGATGGGGAA 58.908 47.619 2.44 0.00 42.21 3.97
283 299 2.491693 CGCTAAAGCAAAGATGGGGAAA 59.508 45.455 2.44 0.00 42.21 3.13
284 300 3.056891 CGCTAAAGCAAAGATGGGGAAAA 60.057 43.478 2.44 0.00 42.21 2.29
285 301 4.560513 CGCTAAAGCAAAGATGGGGAAAAA 60.561 41.667 2.44 0.00 42.21 1.94
349 365 9.894783 ATATGTACTTTCAGTTATGTACGCTAG 57.105 33.333 0.00 0.00 38.35 3.42
397 414 5.426689 TGAGAATCACACCTTCTAGCATT 57.573 39.130 0.00 0.00 42.56 3.56
398 415 6.544928 TGAGAATCACACCTTCTAGCATTA 57.455 37.500 0.00 0.00 42.56 1.90
399 416 6.946340 TGAGAATCACACCTTCTAGCATTAA 58.054 36.000 0.00 0.00 42.56 1.40
400 417 7.394016 TGAGAATCACACCTTCTAGCATTAAA 58.606 34.615 0.00 0.00 42.56 1.52
401 418 7.550551 TGAGAATCACACCTTCTAGCATTAAAG 59.449 37.037 0.00 0.00 42.56 1.85
402 419 6.825721 AGAATCACACCTTCTAGCATTAAAGG 59.174 38.462 5.77 5.77 44.23 3.11
409 426 6.108097 CCTTCTAGCATTAAAGGTTCGTTC 57.892 41.667 0.01 0.00 35.79 3.95
410 427 5.642063 CCTTCTAGCATTAAAGGTTCGTTCA 59.358 40.000 0.01 0.00 35.79 3.18
411 428 6.183360 CCTTCTAGCATTAAAGGTTCGTTCAG 60.183 42.308 0.01 0.00 35.79 3.02
412 429 6.032956 TCTAGCATTAAAGGTTCGTTCAGA 57.967 37.500 0.00 0.00 0.00 3.27
413 430 6.460781 TCTAGCATTAAAGGTTCGTTCAGAA 58.539 36.000 0.00 0.00 36.31 3.02
453 470 7.636259 AAAATGGTTCAAAACGTATGACATG 57.364 32.000 3.64 0.00 0.00 3.21
454 471 5.957842 ATGGTTCAAAACGTATGACATGT 57.042 34.783 0.00 0.00 0.00 3.21
455 472 5.102020 TGGTTCAAAACGTATGACATGTG 57.898 39.130 1.15 0.00 0.00 3.21
456 473 4.816925 TGGTTCAAAACGTATGACATGTGA 59.183 37.500 1.15 0.00 0.00 3.58
457 474 5.471797 TGGTTCAAAACGTATGACATGTGAT 59.528 36.000 1.15 2.00 0.00 3.06
458 475 5.794945 GGTTCAAAACGTATGACATGTGATG 59.205 40.000 1.15 0.00 0.00 3.07
459 476 5.544136 TCAAAACGTATGACATGTGATGG 57.456 39.130 1.15 0.00 33.60 3.51
460 477 4.394610 TCAAAACGTATGACATGTGATGGG 59.605 41.667 1.15 0.00 33.60 4.00
461 478 1.953559 ACGTATGACATGTGATGGGC 58.046 50.000 1.15 0.00 33.60 5.36
462 479 1.229428 CGTATGACATGTGATGGGCC 58.771 55.000 1.15 0.00 33.60 5.80
463 480 1.229428 GTATGACATGTGATGGGCCG 58.771 55.000 1.15 0.00 33.60 6.13
464 481 0.836606 TATGACATGTGATGGGCCGT 59.163 50.000 1.15 0.00 33.60 5.68
465 482 0.749091 ATGACATGTGATGGGCCGTG 60.749 55.000 1.15 0.00 33.60 4.94
466 483 1.078497 GACATGTGATGGGCCGTGA 60.078 57.895 1.15 0.00 33.60 4.35
467 484 0.676466 GACATGTGATGGGCCGTGAA 60.676 55.000 1.15 0.00 33.60 3.18
468 485 0.034186 ACATGTGATGGGCCGTGAAT 60.034 50.000 1.02 0.00 33.60 2.57
469 486 1.211703 ACATGTGATGGGCCGTGAATA 59.788 47.619 1.02 0.00 33.60 1.75
470 487 1.603802 CATGTGATGGGCCGTGAATAC 59.396 52.381 1.02 0.00 0.00 1.89
471 488 0.615850 TGTGATGGGCCGTGAATACA 59.384 50.000 1.02 0.00 0.00 2.29
472 489 1.299541 GTGATGGGCCGTGAATACAG 58.700 55.000 1.02 0.00 0.00 2.74
473 490 1.134521 GTGATGGGCCGTGAATACAGA 60.135 52.381 1.02 0.00 0.00 3.41
474 491 1.768275 TGATGGGCCGTGAATACAGAT 59.232 47.619 1.02 0.00 0.00 2.90
475 492 2.172505 TGATGGGCCGTGAATACAGATT 59.827 45.455 1.02 0.00 0.00 2.40
476 493 2.799126 TGGGCCGTGAATACAGATTT 57.201 45.000 0.00 0.00 0.00 2.17
477 494 3.080300 TGGGCCGTGAATACAGATTTT 57.920 42.857 0.00 0.00 0.00 1.82
478 495 2.752354 TGGGCCGTGAATACAGATTTTG 59.248 45.455 0.00 0.00 0.00 2.44
479 496 2.752903 GGGCCGTGAATACAGATTTTGT 59.247 45.455 0.00 0.00 43.96 2.83
480 497 3.427503 GGGCCGTGAATACAGATTTTGTG 60.428 47.826 0.00 0.00 41.10 3.33
481 498 3.171277 GCCGTGAATACAGATTTTGTGC 58.829 45.455 0.00 0.00 41.10 4.57
482 499 3.365868 GCCGTGAATACAGATTTTGTGCA 60.366 43.478 0.00 0.00 41.10 4.57
483 500 4.406069 CCGTGAATACAGATTTTGTGCAG 58.594 43.478 0.00 0.00 41.10 4.41
484 501 4.154015 CCGTGAATACAGATTTTGTGCAGA 59.846 41.667 0.00 0.00 41.10 4.26
485 502 5.082059 CGTGAATACAGATTTTGTGCAGAC 58.918 41.667 0.00 0.00 41.10 3.51
486 503 5.082059 GTGAATACAGATTTTGTGCAGACG 58.918 41.667 0.00 0.00 41.10 4.18
487 504 4.754618 TGAATACAGATTTTGTGCAGACGT 59.245 37.500 0.00 0.00 41.10 4.34
488 505 5.238432 TGAATACAGATTTTGTGCAGACGTT 59.762 36.000 0.00 0.00 41.10 3.99
489 506 3.338818 ACAGATTTTGTGCAGACGTTG 57.661 42.857 0.00 0.00 38.99 4.10
490 507 2.682856 ACAGATTTTGTGCAGACGTTGT 59.317 40.909 0.00 0.00 38.99 3.32
491 508 3.128589 ACAGATTTTGTGCAGACGTTGTT 59.871 39.130 0.00 0.00 38.99 2.83
492 509 4.104776 CAGATTTTGTGCAGACGTTGTTT 58.895 39.130 0.00 0.00 0.00 2.83
493 510 4.562394 CAGATTTTGTGCAGACGTTGTTTT 59.438 37.500 0.00 0.00 0.00 2.43
494 511 4.798387 AGATTTTGTGCAGACGTTGTTTTC 59.202 37.500 0.00 0.00 0.00 2.29
495 512 3.560902 TTTGTGCAGACGTTGTTTTCA 57.439 38.095 0.00 0.00 0.00 2.69
496 513 2.535934 TGTGCAGACGTTGTTTTCAC 57.464 45.000 0.00 0.00 0.00 3.18
497 514 1.201976 TGTGCAGACGTTGTTTTCACG 60.202 47.619 0.00 0.00 0.00 4.35
498 515 0.375454 TGCAGACGTTGTTTTCACGG 59.625 50.000 0.00 0.00 0.00 4.94
499 516 0.928451 GCAGACGTTGTTTTCACGGC 60.928 55.000 0.00 0.00 34.38 5.68
500 517 0.653323 CAGACGTTGTTTTCACGGCG 60.653 55.000 4.80 4.80 37.40 6.46
501 518 1.085501 AGACGTTGTTTTCACGGCGT 61.086 50.000 6.77 6.77 37.40 5.68
502 519 0.922111 GACGTTGTTTTCACGGCGTG 60.922 55.000 32.75 32.75 34.77 5.34
503 520 1.348938 CGTTGTTTTCACGGCGTGA 59.651 52.632 36.29 36.29 41.09 4.35
504 521 0.653323 CGTTGTTTTCACGGCGTGAG 60.653 55.000 36.94 22.75 43.69 3.51
505 522 0.316689 GTTGTTTTCACGGCGTGAGG 60.317 55.000 36.94 15.88 43.69 3.86
506 523 1.440938 TTGTTTTCACGGCGTGAGGG 61.441 55.000 36.94 15.50 43.69 4.30
507 524 1.595929 GTTTTCACGGCGTGAGGGA 60.596 57.895 36.94 25.57 43.69 4.20
508 525 1.301401 TTTTCACGGCGTGAGGGAG 60.301 57.895 36.94 14.35 43.69 4.30
509 526 3.876589 TTTCACGGCGTGAGGGAGC 62.877 63.158 36.94 0.00 43.69 4.70
516 533 4.749310 CGTGAGGGAGCAGCGCTT 62.749 66.667 7.50 0.00 39.88 4.68
517 534 2.579201 GTGAGGGAGCAGCGCTTA 59.421 61.111 7.50 0.00 39.88 3.09
518 535 1.811679 GTGAGGGAGCAGCGCTTAC 60.812 63.158 7.50 2.24 39.88 2.34
519 536 1.984570 TGAGGGAGCAGCGCTTACT 60.985 57.895 7.50 8.66 39.88 2.24
520 537 1.520342 GAGGGAGCAGCGCTTACTG 60.520 63.158 7.50 0.00 39.88 2.74
521 538 2.232298 GAGGGAGCAGCGCTTACTGT 62.232 60.000 7.50 0.00 39.88 3.55
522 539 1.376037 GGGAGCAGCGCTTACTGTT 60.376 57.895 7.50 0.00 39.88 3.16
523 540 1.362406 GGGAGCAGCGCTTACTGTTC 61.362 60.000 7.50 4.71 44.49 3.18
524 541 2.082354 GAGCAGCGCTTACTGTTCC 58.918 57.895 7.50 0.00 40.77 3.62
525 542 1.687494 GAGCAGCGCTTACTGTTCCG 61.687 60.000 7.50 0.00 40.77 4.30
526 543 2.027625 GCAGCGCTTACTGTTCCGT 61.028 57.895 7.50 0.00 39.96 4.69
527 544 1.781555 CAGCGCTTACTGTTCCGTG 59.218 57.895 7.50 0.00 32.78 4.94
528 545 1.374252 AGCGCTTACTGTTCCGTGG 60.374 57.895 2.64 0.00 0.00 4.94
529 546 2.388232 GCGCTTACTGTTCCGTGGG 61.388 63.158 0.00 0.00 0.00 4.61
530 547 1.005394 CGCTTACTGTTCCGTGGGT 60.005 57.895 0.00 0.00 0.00 4.51
531 548 1.012486 CGCTTACTGTTCCGTGGGTC 61.012 60.000 0.00 0.00 0.00 4.46
532 549 0.672711 GCTTACTGTTCCGTGGGTCC 60.673 60.000 0.00 0.00 0.00 4.46
533 550 0.389426 CTTACTGTTCCGTGGGTCCG 60.389 60.000 0.00 0.00 0.00 4.79
534 551 2.438951 TTACTGTTCCGTGGGTCCGC 62.439 60.000 0.00 0.00 0.00 5.54
535 552 4.308458 CTGTTCCGTGGGTCCGCA 62.308 66.667 1.30 0.00 0.00 5.69
536 553 4.612412 TGTTCCGTGGGTCCGCAC 62.612 66.667 4.54 4.54 0.00 5.34
541 558 4.742201 CGTGGGTCCGCACCAGAG 62.742 72.222 0.00 0.00 45.94 3.35
542 559 3.626924 GTGGGTCCGCACCAGAGT 61.627 66.667 0.00 0.00 45.94 3.24
543 560 3.311110 TGGGTCCGCACCAGAGTC 61.311 66.667 0.00 0.00 45.94 3.36
544 561 4.083862 GGGTCCGCACCAGAGTCC 62.084 72.222 0.00 0.00 45.94 3.85
545 562 2.997897 GGTCCGCACCAGAGTCCT 60.998 66.667 0.00 0.00 43.17 3.85
546 563 2.584391 GGTCCGCACCAGAGTCCTT 61.584 63.158 0.00 0.00 43.17 3.36
547 564 1.255667 GGTCCGCACCAGAGTCCTTA 61.256 60.000 0.00 0.00 43.17 2.69
548 565 0.606604 GTCCGCACCAGAGTCCTTAA 59.393 55.000 0.00 0.00 0.00 1.85
549 566 1.207329 GTCCGCACCAGAGTCCTTAAT 59.793 52.381 0.00 0.00 0.00 1.40
550 567 1.207089 TCCGCACCAGAGTCCTTAATG 59.793 52.381 0.00 0.00 0.00 1.90
551 568 1.066143 CCGCACCAGAGTCCTTAATGT 60.066 52.381 0.00 0.00 0.00 2.71
552 569 2.002586 CGCACCAGAGTCCTTAATGTG 58.997 52.381 0.00 0.00 0.00 3.21
553 570 2.612972 CGCACCAGAGTCCTTAATGTGT 60.613 50.000 0.00 0.00 0.00 3.72
554 571 2.744202 GCACCAGAGTCCTTAATGTGTG 59.256 50.000 0.00 0.00 0.00 3.82
555 572 3.338249 CACCAGAGTCCTTAATGTGTGG 58.662 50.000 0.00 0.00 0.00 4.17
556 573 2.290323 ACCAGAGTCCTTAATGTGTGGC 60.290 50.000 0.00 0.00 0.00 5.01
557 574 2.002586 CAGAGTCCTTAATGTGTGGCG 58.997 52.381 0.00 0.00 0.00 5.69
558 575 1.623811 AGAGTCCTTAATGTGTGGCGT 59.376 47.619 0.00 0.00 0.00 5.68
559 576 2.038557 AGAGTCCTTAATGTGTGGCGTT 59.961 45.455 0.00 0.00 0.00 4.84
560 577 2.151202 AGTCCTTAATGTGTGGCGTTG 58.849 47.619 0.00 0.00 0.00 4.10
561 578 0.878416 TCCTTAATGTGTGGCGTTGC 59.122 50.000 0.00 0.00 0.00 4.17
562 579 0.454285 CCTTAATGTGTGGCGTTGCG 60.454 55.000 0.00 0.00 0.00 4.85
563 580 0.237235 CTTAATGTGTGGCGTTGCGT 59.763 50.000 0.00 0.00 0.00 5.24
564 581 1.461512 CTTAATGTGTGGCGTTGCGTA 59.538 47.619 0.00 0.00 0.00 4.42
565 582 0.791422 TAATGTGTGGCGTTGCGTAC 59.209 50.000 0.00 0.00 0.00 3.67
566 583 1.160946 AATGTGTGGCGTTGCGTACA 61.161 50.000 0.00 0.00 0.00 2.90
567 584 1.565156 ATGTGTGGCGTTGCGTACAG 61.565 55.000 0.00 0.00 30.24 2.74
580 597 2.838386 CGTACAGCAGTATACCACGT 57.162 50.000 0.00 0.00 31.84 4.49
581 598 3.141002 CGTACAGCAGTATACCACGTT 57.859 47.619 0.00 0.00 31.84 3.99
582 599 3.103738 CGTACAGCAGTATACCACGTTC 58.896 50.000 0.00 0.00 31.84 3.95
583 600 3.426560 CGTACAGCAGTATACCACGTTCA 60.427 47.826 0.00 0.00 31.84 3.18
584 601 3.671008 ACAGCAGTATACCACGTTCAA 57.329 42.857 0.00 0.00 0.00 2.69
585 602 4.202245 ACAGCAGTATACCACGTTCAAT 57.798 40.909 0.00 0.00 0.00 2.57
586 603 3.932710 ACAGCAGTATACCACGTTCAATG 59.067 43.478 0.00 0.00 0.00 2.82
587 604 2.936498 AGCAGTATACCACGTTCAATGC 59.064 45.455 0.00 0.00 0.00 3.56
588 605 2.285602 GCAGTATACCACGTTCAATGCG 60.286 50.000 0.00 0.00 0.00 4.73
589 606 3.183754 CAGTATACCACGTTCAATGCGA 58.816 45.455 0.00 0.00 0.00 5.10
590 607 3.242944 CAGTATACCACGTTCAATGCGAG 59.757 47.826 0.00 0.00 0.00 5.03
591 608 1.006832 ATACCACGTTCAATGCGAGC 58.993 50.000 0.00 0.00 0.00 5.03
592 609 1.017177 TACCACGTTCAATGCGAGCC 61.017 55.000 0.00 0.00 0.00 4.70
593 610 2.480555 CACGTTCAATGCGAGCCC 59.519 61.111 0.00 0.00 0.00 5.19
594 611 2.031919 ACGTTCAATGCGAGCCCA 59.968 55.556 0.00 0.00 0.00 5.36
595 612 2.034879 ACGTTCAATGCGAGCCCAG 61.035 57.895 0.00 0.00 0.00 4.45
596 613 2.034879 CGTTCAATGCGAGCCCAGT 61.035 57.895 0.00 0.00 0.00 4.00
597 614 1.796796 GTTCAATGCGAGCCCAGTC 59.203 57.895 0.00 0.00 0.00 3.51
598 615 0.674895 GTTCAATGCGAGCCCAGTCT 60.675 55.000 0.00 0.00 0.00 3.24
599 616 0.391661 TTCAATGCGAGCCCAGTCTC 60.392 55.000 0.00 0.00 0.00 3.36
600 617 1.817099 CAATGCGAGCCCAGTCTCC 60.817 63.158 0.00 0.00 0.00 3.71
601 618 3.376935 AATGCGAGCCCAGTCTCCG 62.377 63.158 0.00 0.00 0.00 4.63
603 620 3.532155 GCGAGCCCAGTCTCCGAT 61.532 66.667 0.00 0.00 0.00 4.18
604 621 2.725008 CGAGCCCAGTCTCCGATC 59.275 66.667 0.00 0.00 0.00 3.69
605 622 2.851071 CGAGCCCAGTCTCCGATCC 61.851 68.421 0.00 0.00 0.00 3.36
606 623 2.444895 AGCCCAGTCTCCGATCCC 60.445 66.667 0.00 0.00 0.00 3.85
607 624 2.764128 GCCCAGTCTCCGATCCCA 60.764 66.667 0.00 0.00 0.00 4.37
608 625 2.367202 GCCCAGTCTCCGATCCCAA 61.367 63.158 0.00 0.00 0.00 4.12
609 626 1.522569 CCCAGTCTCCGATCCCAAC 59.477 63.158 0.00 0.00 0.00 3.77
610 627 1.141881 CCAGTCTCCGATCCCAACG 59.858 63.158 0.00 0.00 0.00 4.10
611 628 1.320344 CCAGTCTCCGATCCCAACGA 61.320 60.000 0.00 0.00 0.00 3.85
612 629 0.101399 CAGTCTCCGATCCCAACGAG 59.899 60.000 0.00 0.00 0.00 4.18
613 630 0.034380 AGTCTCCGATCCCAACGAGA 60.034 55.000 0.00 0.00 0.00 4.04
614 631 0.815734 GTCTCCGATCCCAACGAGAA 59.184 55.000 0.00 0.00 0.00 2.87
615 632 0.815734 TCTCCGATCCCAACGAGAAC 59.184 55.000 0.00 0.00 0.00 3.01
616 633 0.530744 CTCCGATCCCAACGAGAACA 59.469 55.000 0.00 0.00 0.00 3.18
617 634 0.970640 TCCGATCCCAACGAGAACAA 59.029 50.000 0.00 0.00 0.00 2.83
618 635 1.067142 TCCGATCCCAACGAGAACAAG 60.067 52.381 0.00 0.00 0.00 3.16
619 636 0.721718 CGATCCCAACGAGAACAAGC 59.278 55.000 0.00 0.00 0.00 4.01
620 637 0.721718 GATCCCAACGAGAACAAGCG 59.278 55.000 0.00 0.00 0.00 4.68
621 638 1.298859 ATCCCAACGAGAACAAGCGC 61.299 55.000 0.00 0.00 0.00 5.92
622 639 2.250939 CCCAACGAGAACAAGCGCA 61.251 57.895 11.47 0.00 0.00 6.09
623 640 1.082756 CCAACGAGAACAAGCGCAC 60.083 57.895 11.47 0.00 0.00 5.34
624 641 1.641140 CAACGAGAACAAGCGCACA 59.359 52.632 11.47 0.00 0.00 4.57
625 642 0.027455 CAACGAGAACAAGCGCACAA 59.973 50.000 11.47 0.00 0.00 3.33
626 643 0.730265 AACGAGAACAAGCGCACAAA 59.270 45.000 11.47 0.00 0.00 2.83
627 644 0.304705 ACGAGAACAAGCGCACAAAG 59.695 50.000 11.47 0.00 0.00 2.77
628 645 0.581529 CGAGAACAAGCGCACAAAGA 59.418 50.000 11.47 0.00 0.00 2.52
629 646 1.195448 CGAGAACAAGCGCACAAAGAT 59.805 47.619 11.47 0.00 0.00 2.40
630 647 2.411748 CGAGAACAAGCGCACAAAGATA 59.588 45.455 11.47 0.00 0.00 1.98
631 648 3.120683 CGAGAACAAGCGCACAAAGATAA 60.121 43.478 11.47 0.00 0.00 1.75
632 649 4.147219 AGAACAAGCGCACAAAGATAAC 57.853 40.909 11.47 0.00 0.00 1.89
633 650 3.563808 AGAACAAGCGCACAAAGATAACA 59.436 39.130 11.47 0.00 0.00 2.41
634 651 4.216257 AGAACAAGCGCACAAAGATAACAT 59.784 37.500 11.47 0.00 0.00 2.71
635 652 3.825308 ACAAGCGCACAAAGATAACATG 58.175 40.909 11.47 0.00 0.00 3.21
636 653 3.253188 ACAAGCGCACAAAGATAACATGT 59.747 39.130 11.47 0.00 0.00 3.21
637 654 3.476295 AGCGCACAAAGATAACATGTG 57.524 42.857 11.47 0.97 45.54 3.21
642 659 3.504863 CACAAAGATAACATGTGCAGGC 58.495 45.455 0.00 0.00 38.14 4.85
643 660 2.162208 ACAAAGATAACATGTGCAGGCG 59.838 45.455 0.00 0.00 0.00 5.52
644 661 2.401583 AAGATAACATGTGCAGGCGA 57.598 45.000 0.00 0.00 0.00 5.54
645 662 1.945387 AGATAACATGTGCAGGCGAG 58.055 50.000 0.00 0.00 0.00 5.03
646 663 0.940126 GATAACATGTGCAGGCGAGG 59.060 55.000 0.00 0.00 0.00 4.63
647 664 0.541392 ATAACATGTGCAGGCGAGGA 59.459 50.000 0.00 0.00 0.00 3.71
648 665 0.391130 TAACATGTGCAGGCGAGGAC 60.391 55.000 0.00 0.00 0.00 3.85
649 666 3.190849 CATGTGCAGGCGAGGACG 61.191 66.667 0.00 0.00 42.93 4.79
650 667 3.381983 ATGTGCAGGCGAGGACGA 61.382 61.111 0.00 0.00 42.66 4.20
651 668 3.362399 ATGTGCAGGCGAGGACGAG 62.362 63.158 0.00 0.00 42.66 4.18
655 672 3.753434 CAGGCGAGGACGAGCACT 61.753 66.667 0.00 0.00 42.66 4.40
656 673 3.444805 AGGCGAGGACGAGCACTC 61.445 66.667 0.00 0.00 42.66 3.51
657 674 4.500116 GGCGAGGACGAGCACTCC 62.500 72.222 0.00 0.00 42.66 3.85
658 675 3.444805 GCGAGGACGAGCACTCCT 61.445 66.667 0.00 2.67 41.18 3.69
659 676 2.113433 GCGAGGACGAGCACTCCTA 61.113 63.158 0.00 0.00 38.35 2.94
660 677 1.448922 GCGAGGACGAGCACTCCTAT 61.449 60.000 0.00 0.00 38.35 2.57
661 678 0.309302 CGAGGACGAGCACTCCTATG 59.691 60.000 0.00 0.00 38.35 2.23
662 679 0.671251 GAGGACGAGCACTCCTATGG 59.329 60.000 0.00 0.00 38.35 2.74
663 680 0.259065 AGGACGAGCACTCCTATGGA 59.741 55.000 0.00 0.00 36.28 3.41
664 681 1.133325 AGGACGAGCACTCCTATGGAT 60.133 52.381 0.00 0.00 36.28 3.41
665 682 1.689273 GGACGAGCACTCCTATGGATT 59.311 52.381 0.00 0.00 0.00 3.01
666 683 2.103263 GGACGAGCACTCCTATGGATTT 59.897 50.000 0.00 0.00 0.00 2.17
667 684 3.432326 GGACGAGCACTCCTATGGATTTT 60.432 47.826 0.00 0.00 0.00 1.82
668 685 3.798202 ACGAGCACTCCTATGGATTTTC 58.202 45.455 0.00 0.00 0.00 2.29
669 686 2.797156 CGAGCACTCCTATGGATTTTCG 59.203 50.000 0.00 0.00 0.00 3.46
670 687 3.490933 CGAGCACTCCTATGGATTTTCGA 60.491 47.826 0.00 0.00 0.00 3.71
671 688 4.636249 GAGCACTCCTATGGATTTTCGAT 58.364 43.478 0.00 0.00 0.00 3.59
672 689 5.041191 AGCACTCCTATGGATTTTCGATT 57.959 39.130 0.00 0.00 0.00 3.34
673 690 4.818546 AGCACTCCTATGGATTTTCGATTG 59.181 41.667 0.00 0.00 0.00 2.67
674 691 4.555511 GCACTCCTATGGATTTTCGATTGC 60.556 45.833 0.00 0.00 0.00 3.56
675 692 4.818546 CACTCCTATGGATTTTCGATTGCT 59.181 41.667 0.00 0.00 0.00 3.91
676 693 5.991606 CACTCCTATGGATTTTCGATTGCTA 59.008 40.000 0.00 0.00 0.00 3.49
677 694 6.652481 CACTCCTATGGATTTTCGATTGCTAT 59.348 38.462 0.00 0.00 0.00 2.97
678 695 7.819415 CACTCCTATGGATTTTCGATTGCTATA 59.181 37.037 0.00 0.00 0.00 1.31
679 696 8.543774 ACTCCTATGGATTTTCGATTGCTATAT 58.456 33.333 0.00 0.00 0.00 0.86
681 698 9.817809 TCCTATGGATTTTCGATTGCTATATAC 57.182 33.333 0.00 0.00 0.00 1.47
682 699 9.823647 CCTATGGATTTTCGATTGCTATATACT 57.176 33.333 0.00 0.00 0.00 2.12
684 701 8.723942 ATGGATTTTCGATTGCTATATACTCC 57.276 34.615 0.00 0.00 0.00 3.85
685 702 7.103641 TGGATTTTCGATTGCTATATACTCCC 58.896 38.462 0.00 0.00 0.00 4.30
686 703 7.038302 TGGATTTTCGATTGCTATATACTCCCT 60.038 37.037 0.00 0.00 0.00 4.20
687 704 7.492994 GGATTTTCGATTGCTATATACTCCCTC 59.507 40.741 0.00 0.00 0.00 4.30
688 705 5.916661 TTCGATTGCTATATACTCCCTCC 57.083 43.478 0.00 0.00 0.00 4.30
689 706 3.945921 TCGATTGCTATATACTCCCTCCG 59.054 47.826 0.00 0.00 0.00 4.63
690 707 3.695060 CGATTGCTATATACTCCCTCCGT 59.305 47.826 0.00 0.00 0.00 4.69
691 708 4.158025 CGATTGCTATATACTCCCTCCGTT 59.842 45.833 0.00 0.00 0.00 4.44
692 709 5.652518 GATTGCTATATACTCCCTCCGTTC 58.347 45.833 0.00 0.00 0.00 3.95
693 710 3.428532 TGCTATATACTCCCTCCGTTCC 58.571 50.000 0.00 0.00 0.00 3.62
694 711 3.181426 TGCTATATACTCCCTCCGTTCCA 60.181 47.826 0.00 0.00 0.00 3.53
695 712 3.830755 GCTATATACTCCCTCCGTTCCAA 59.169 47.826 0.00 0.00 0.00 3.53
696 713 4.282703 GCTATATACTCCCTCCGTTCCAAA 59.717 45.833 0.00 0.00 0.00 3.28
697 714 5.221581 GCTATATACTCCCTCCGTTCCAAAA 60.222 44.000 0.00 0.00 0.00 2.44
698 715 5.906772 ATATACTCCCTCCGTTCCAAAAT 57.093 39.130 0.00 0.00 0.00 1.82
699 716 7.310237 GCTATATACTCCCTCCGTTCCAAAATA 60.310 40.741 0.00 0.00 0.00 1.40
700 717 5.906772 ATACTCCCTCCGTTCCAAAATAT 57.093 39.130 0.00 0.00 0.00 1.28
701 718 8.674925 ATATACTCCCTCCGTTCCAAAATATA 57.325 34.615 0.00 0.00 0.00 0.86
702 719 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
703 720 4.065789 CTCCCTCCGTTCCAAAATATAGC 58.934 47.826 0.00 0.00 0.00 2.97
704 721 2.806244 CCCTCCGTTCCAAAATATAGCG 59.194 50.000 0.00 0.00 0.00 4.26
705 722 2.223377 CCTCCGTTCCAAAATATAGCGC 59.777 50.000 0.00 0.00 0.00 5.92
706 723 1.862201 TCCGTTCCAAAATATAGCGCG 59.138 47.619 0.00 0.00 0.00 6.86
707 724 1.658968 CGTTCCAAAATATAGCGCGC 58.341 50.000 26.66 26.66 0.00 6.86
708 725 1.659211 CGTTCCAAAATATAGCGCGCC 60.659 52.381 30.33 10.31 0.00 6.53
709 726 0.948678 TTCCAAAATATAGCGCGCCC 59.051 50.000 30.33 0.16 0.00 6.13
710 727 0.179043 TCCAAAATATAGCGCGCCCA 60.179 50.000 30.33 17.44 0.00 5.36
711 728 0.040425 CCAAAATATAGCGCGCCCAC 60.040 55.000 30.33 0.00 0.00 4.61
712 729 0.384230 CAAAATATAGCGCGCCCACG 60.384 55.000 30.33 4.40 44.07 4.94
722 739 3.788766 CGCCCACGCTTTTCGAGG 61.789 66.667 0.00 0.00 46.50 4.63
723 740 2.668550 GCCCACGCTTTTCGAGGT 60.669 61.111 0.71 0.00 45.67 3.85
724 741 2.258726 GCCCACGCTTTTCGAGGTT 61.259 57.895 0.71 0.00 45.67 3.50
725 742 1.866925 CCCACGCTTTTCGAGGTTC 59.133 57.895 0.71 0.00 45.67 3.62
726 743 0.882927 CCCACGCTTTTCGAGGTTCA 60.883 55.000 0.71 0.00 45.67 3.18
727 744 0.941542 CCACGCTTTTCGAGGTTCAA 59.058 50.000 0.00 0.00 42.79 2.69
728 745 1.333791 CCACGCTTTTCGAGGTTCAAC 60.334 52.381 0.00 0.00 42.79 3.18
729 746 1.597663 CACGCTTTTCGAGGTTCAACT 59.402 47.619 0.00 0.00 41.67 3.16
730 747 2.031683 CACGCTTTTCGAGGTTCAACTT 59.968 45.455 0.00 0.00 41.67 2.66
731 748 2.681344 ACGCTTTTCGAGGTTCAACTTT 59.319 40.909 0.00 0.00 41.67 2.66
732 749 3.035942 CGCTTTTCGAGGTTCAACTTTG 58.964 45.455 0.00 0.00 41.67 2.77
733 750 3.242608 CGCTTTTCGAGGTTCAACTTTGA 60.243 43.478 0.00 0.00 41.67 2.69
734 751 4.035684 GCTTTTCGAGGTTCAACTTTGAC 58.964 43.478 0.00 0.00 36.83 3.18
735 752 4.598062 CTTTTCGAGGTTCAACTTTGACC 58.402 43.478 0.00 0.00 36.83 4.02
736 753 2.992124 TCGAGGTTCAACTTTGACCA 57.008 45.000 11.01 0.00 36.83 4.02
737 754 3.485463 TCGAGGTTCAACTTTGACCAT 57.515 42.857 11.01 0.00 36.83 3.55
738 755 4.610605 TCGAGGTTCAACTTTGACCATA 57.389 40.909 11.01 0.00 36.83 2.74
739 756 4.963373 TCGAGGTTCAACTTTGACCATAA 58.037 39.130 11.01 0.00 36.83 1.90
740 757 5.369833 TCGAGGTTCAACTTTGACCATAAA 58.630 37.500 11.01 0.00 36.83 1.40
741 758 6.001460 TCGAGGTTCAACTTTGACCATAAAT 58.999 36.000 11.01 0.00 36.83 1.40
742 759 6.488683 TCGAGGTTCAACTTTGACCATAAATT 59.511 34.615 11.01 0.00 36.83 1.82
743 760 7.013846 TCGAGGTTCAACTTTGACCATAAATTT 59.986 33.333 0.00 0.00 36.83 1.82
744 761 8.293867 CGAGGTTCAACTTTGACCATAAATTTA 58.706 33.333 0.00 0.00 36.83 1.40
745 762 9.974980 GAGGTTCAACTTTGACCATAAATTTAA 57.025 29.630 1.21 0.00 36.83 1.52
746 763 9.758651 AGGTTCAACTTTGACCATAAATTTAAC 57.241 29.630 1.21 0.00 36.83 2.01
747 764 8.984764 GGTTCAACTTTGACCATAAATTTAACC 58.015 33.333 1.21 0.00 36.83 2.85
748 765 8.984764 GTTCAACTTTGACCATAAATTTAACCC 58.015 33.333 1.21 0.00 36.83 4.11
749 766 8.251383 TCAACTTTGACCATAAATTTAACCCA 57.749 30.769 1.21 0.00 31.01 4.51
750 767 8.145122 TCAACTTTGACCATAAATTTAACCCAC 58.855 33.333 1.21 0.00 31.01 4.61
751 768 6.683715 ACTTTGACCATAAATTTAACCCACG 58.316 36.000 1.21 0.00 0.00 4.94
752 769 6.490721 ACTTTGACCATAAATTTAACCCACGA 59.509 34.615 1.21 0.00 0.00 4.35
753 770 6.503589 TTGACCATAAATTTAACCCACGAG 57.496 37.500 1.21 0.00 0.00 4.18
754 771 5.806818 TGACCATAAATTTAACCCACGAGA 58.193 37.500 1.21 0.00 0.00 4.04
755 772 5.644636 TGACCATAAATTTAACCCACGAGAC 59.355 40.000 1.21 0.00 0.00 3.36
756 773 4.945543 ACCATAAATTTAACCCACGAGACC 59.054 41.667 1.21 0.00 0.00 3.85
757 774 4.034742 CCATAAATTTAACCCACGAGACCG 59.965 45.833 1.21 0.00 42.50 4.79
758 775 3.405823 AAATTTAACCCACGAGACCGA 57.594 42.857 0.00 0.00 39.50 4.69
759 776 2.375173 ATTTAACCCACGAGACCGAC 57.625 50.000 0.00 0.00 39.50 4.79
760 777 1.331214 TTTAACCCACGAGACCGACT 58.669 50.000 0.00 0.00 39.50 4.18
761 778 0.599558 TTAACCCACGAGACCGACTG 59.400 55.000 0.00 0.00 39.50 3.51
762 779 1.870055 TAACCCACGAGACCGACTGC 61.870 60.000 0.00 0.00 39.50 4.40
763 780 4.778415 CCCACGAGACCGACTGCG 62.778 72.222 0.00 0.00 39.50 5.18
773 790 2.202824 CGACTGCGGCGGGATAAA 60.203 61.111 14.26 0.00 0.00 1.40
774 791 1.812093 CGACTGCGGCGGGATAAAA 60.812 57.895 14.26 0.00 0.00 1.52
775 792 1.363145 CGACTGCGGCGGGATAAAAA 61.363 55.000 14.26 0.00 0.00 1.94
852 869 4.336581 CGCAGTCGGTCTTGTTGA 57.663 55.556 0.00 0.00 0.00 3.18
853 870 2.827604 CGCAGTCGGTCTTGTTGAT 58.172 52.632 0.00 0.00 0.00 2.57
854 871 1.148310 CGCAGTCGGTCTTGTTGATT 58.852 50.000 0.00 0.00 0.00 2.57
855 872 2.333926 CGCAGTCGGTCTTGTTGATTA 58.666 47.619 0.00 0.00 0.00 1.75
856 873 2.734606 CGCAGTCGGTCTTGTTGATTAA 59.265 45.455 0.00 0.00 0.00 1.40
857 874 3.185594 CGCAGTCGGTCTTGTTGATTAAA 59.814 43.478 0.00 0.00 0.00 1.52
858 875 4.142902 CGCAGTCGGTCTTGTTGATTAAAT 60.143 41.667 0.00 0.00 0.00 1.40
859 876 5.616866 CGCAGTCGGTCTTGTTGATTAAATT 60.617 40.000 0.00 0.00 0.00 1.82
860 877 6.401688 CGCAGTCGGTCTTGTTGATTAAATTA 60.402 38.462 0.00 0.00 0.00 1.40
861 878 7.302524 GCAGTCGGTCTTGTTGATTAAATTAA 58.697 34.615 0.00 0.00 0.00 1.40
862 879 7.968405 GCAGTCGGTCTTGTTGATTAAATTAAT 59.032 33.333 0.00 0.00 0.00 1.40
863 880 9.277565 CAGTCGGTCTTGTTGATTAAATTAATG 57.722 33.333 2.58 0.00 0.00 1.90
864 881 8.458843 AGTCGGTCTTGTTGATTAAATTAATGG 58.541 33.333 2.58 0.00 0.00 3.16
865 882 8.241367 GTCGGTCTTGTTGATTAAATTAATGGT 58.759 33.333 2.58 0.00 0.00 3.55
866 883 8.455682 TCGGTCTTGTTGATTAAATTAATGGTC 58.544 33.333 2.58 0.00 0.00 4.02
867 884 8.240682 CGGTCTTGTTGATTAAATTAATGGTCA 58.759 33.333 2.58 0.00 0.00 4.02
868 885 9.921637 GGTCTTGTTGATTAAATTAATGGTCAA 57.078 29.630 2.58 0.04 0.00 3.18
878 895 9.995003 ATTAAATTAATGGTCAAAGTTGAAGCA 57.005 25.926 0.00 0.00 39.21 3.91
879 896 7.713764 AAATTAATGGTCAAAGTTGAAGCAC 57.286 32.000 0.00 0.00 39.21 4.40
880 897 3.354089 AATGGTCAAAGTTGAAGCACG 57.646 42.857 0.00 0.00 39.21 5.34
881 898 1.021202 TGGTCAAAGTTGAAGCACGG 58.979 50.000 0.00 0.00 39.21 4.94
882 899 1.305201 GGTCAAAGTTGAAGCACGGA 58.695 50.000 0.00 0.00 39.21 4.69
883 900 1.673920 GGTCAAAGTTGAAGCACGGAA 59.326 47.619 0.00 0.00 39.21 4.30
884 901 2.098443 GGTCAAAGTTGAAGCACGGAAA 59.902 45.455 0.00 0.00 39.21 3.13
885 902 3.105937 GTCAAAGTTGAAGCACGGAAAC 58.894 45.455 0.00 0.00 39.21 2.78
886 903 2.098443 TCAAAGTTGAAGCACGGAAACC 59.902 45.455 0.00 0.00 33.55 3.27
887 904 5.321388 TCAAAGTTGAAGCACGGAAACCG 62.321 47.826 8.67 8.67 43.00 4.44
897 914 4.736896 GGAAACCGAGGACGCGCT 62.737 66.667 5.73 0.00 38.29 5.92
898 915 2.180017 GAAACCGAGGACGCGCTA 59.820 61.111 5.73 0.00 38.29 4.26
899 916 1.226888 GAAACCGAGGACGCGCTAT 60.227 57.895 5.73 0.00 38.29 2.97
900 917 0.029834 GAAACCGAGGACGCGCTATA 59.970 55.000 5.73 0.00 38.29 1.31
901 918 0.672342 AAACCGAGGACGCGCTATAT 59.328 50.000 5.73 0.00 38.29 0.86
902 919 0.672342 AACCGAGGACGCGCTATATT 59.328 50.000 5.73 0.00 38.29 1.28
903 920 0.672342 ACCGAGGACGCGCTATATTT 59.328 50.000 5.73 0.00 38.29 1.40
904 921 1.068127 ACCGAGGACGCGCTATATTTT 59.932 47.619 5.73 0.00 38.29 1.82
905 922 1.455786 CCGAGGACGCGCTATATTTTG 59.544 52.381 5.73 0.00 38.29 2.44
906 923 1.455786 CGAGGACGCGCTATATTTTGG 59.544 52.381 5.73 0.00 0.00 3.28
907 924 2.750948 GAGGACGCGCTATATTTTGGA 58.249 47.619 5.73 0.00 0.00 3.53
908 925 3.128349 GAGGACGCGCTATATTTTGGAA 58.872 45.455 5.73 0.00 0.00 3.53
909 926 2.870411 AGGACGCGCTATATTTTGGAAC 59.130 45.455 5.73 0.00 0.00 3.62
910 927 2.348218 GGACGCGCTATATTTTGGAACG 60.348 50.000 5.73 0.00 0.00 3.95
911 928 1.595794 ACGCGCTATATTTTGGAACGG 59.404 47.619 5.73 0.00 0.00 4.44
912 929 1.862201 CGCGCTATATTTTGGAACGGA 59.138 47.619 5.56 0.00 0.00 4.69
913 930 2.096909 CGCGCTATATTTTGGAACGGAG 60.097 50.000 5.56 0.00 0.00 4.63
914 931 2.223377 GCGCTATATTTTGGAACGGAGG 59.777 50.000 0.00 0.00 0.00 4.30
915 932 2.806244 CGCTATATTTTGGAACGGAGGG 59.194 50.000 0.00 0.00 0.00 4.30
916 933 3.493699 CGCTATATTTTGGAACGGAGGGA 60.494 47.826 0.00 0.00 0.00 4.20
917 934 4.065789 GCTATATTTTGGAACGGAGGGAG 58.934 47.826 0.00 0.00 0.00 4.30
981 998 4.204799 TGCTAACTGCTAAGATCCTCGTA 58.795 43.478 0.00 0.00 43.37 3.43
1970 2210 4.005650 CCAGCATCAGAGCTTTTCAAGTA 58.994 43.478 0.00 0.00 43.70 2.24
1972 2212 5.448768 CCAGCATCAGAGCTTTTCAAGTATG 60.449 44.000 0.00 0.00 43.70 2.39
1974 2214 4.637534 GCATCAGAGCTTTTCAAGTATGGA 59.362 41.667 0.00 0.00 0.00 3.41
1980 2220 8.321353 TCAGAGCTTTTCAAGTATGGATTCTTA 58.679 33.333 0.00 0.00 0.00 2.10
1989 2229 4.338879 AGTATGGATTCTTATGCATGGCC 58.661 43.478 10.16 0.00 42.10 5.36
2094 2334 2.108362 CCGGCGGTTATCACCTCC 59.892 66.667 19.97 0.00 43.84 4.30
2112 2352 2.461110 CGTACAACATGGCCTCGGC 61.461 63.158 3.32 0.00 41.06 5.54
2161 2401 3.937814 AGAATGACACTGCATCGGTTTA 58.062 40.909 0.00 0.00 0.00 2.01
2166 2406 4.323417 TGACACTGCATCGGTTTAGAAAT 58.677 39.130 0.00 0.00 0.00 2.17
2172 2412 4.574892 TGCATCGGTTTAGAAATCAGTCA 58.425 39.130 0.00 0.00 0.00 3.41
2175 2415 5.550981 CATCGGTTTAGAAATCAGTCAACG 58.449 41.667 0.00 0.00 0.00 4.10
2180 2420 6.347402 CGGTTTAGAAATCAGTCAACGTCATT 60.347 38.462 0.00 0.00 0.00 2.57
2184 2424 6.952935 AGAAATCAGTCAACGTCATTAGTC 57.047 37.500 0.00 0.00 0.00 2.59
2193 2433 6.071560 AGTCAACGTCATTAGTCTGGTATGAA 60.072 38.462 0.00 0.00 30.72 2.57
2217 2457 2.808543 GGCATACATCGAAGCTAAAGGG 59.191 50.000 0.00 0.00 0.00 3.95
2342 2582 2.280660 CTGGGCTAGCTGCATCCG 60.281 66.667 15.72 0.09 45.15 4.18
2386 2627 8.050930 TCTCCAACAAAGTTTAAACTAAGAGGT 58.949 33.333 20.83 11.63 38.57 3.85
2387 2628 8.584063 TCCAACAAAGTTTAAACTAAGAGGTT 57.416 30.769 20.83 16.00 38.57 3.50
2388 2629 9.683870 TCCAACAAAGTTTAAACTAAGAGGTTA 57.316 29.630 20.83 5.46 38.57 2.85
2537 2859 1.279496 CCACTCCTCCACTCCATTGA 58.721 55.000 0.00 0.00 0.00 2.57
2551 2873 2.760092 TCCATTGACCAAAAGCCTATGC 59.240 45.455 0.00 0.00 37.95 3.14
2618 2940 7.020914 AGAGATTATCCAAGCGAATGTTTTC 57.979 36.000 0.00 0.00 0.00 2.29
2694 3019 8.166726 AGAACTCCCTGTCTCTAATTTGATTTT 58.833 33.333 0.00 0.00 0.00 1.82
2822 3149 2.265739 GTGGCGAGCATGAGGACA 59.734 61.111 0.00 0.00 0.00 4.02
2915 3245 1.202770 AGTACCACAGGTCCTTGCAAC 60.203 52.381 0.00 0.00 37.09 4.17
2964 3295 3.881688 CAATGAAATTTTTGGTGGTGCCA 59.118 39.130 0.00 0.00 39.40 4.92
3027 3364 1.075659 GTCCTGCTTTTGGGCCTCT 59.924 57.895 4.53 0.00 0.00 3.69
3127 3471 2.050269 CCGGAGGCCGTGATTCTAT 58.950 57.895 0.00 0.00 46.80 1.98
3175 3519 7.396540 AGGAAATGTCAATAAAGGCTTGTAG 57.603 36.000 0.00 0.00 0.00 2.74
3185 3529 7.936847 TCAATAAAGGCTTGTAGAAACTCTGAA 59.063 33.333 0.00 0.00 0.00 3.02
3186 3530 7.913674 ATAAAGGCTTGTAGAAACTCTGAAG 57.086 36.000 0.00 0.00 0.00 3.02
3187 3531 5.552870 AAGGCTTGTAGAAACTCTGAAGA 57.447 39.130 0.00 0.00 0.00 2.87
3189 3533 3.997681 GGCTTGTAGAAACTCTGAAGACC 59.002 47.826 0.00 0.00 0.00 3.85
3190 3534 4.503296 GGCTTGTAGAAACTCTGAAGACCA 60.503 45.833 0.00 0.00 0.00 4.02
3191 3535 5.241662 GCTTGTAGAAACTCTGAAGACCAT 58.758 41.667 0.00 0.00 0.00 3.55
3192 3536 5.350091 GCTTGTAGAAACTCTGAAGACCATC 59.650 44.000 0.00 0.00 0.00 3.51
3193 3537 6.419484 TTGTAGAAACTCTGAAGACCATCA 57.581 37.500 0.00 0.00 0.00 3.07
3194 3538 6.611613 TGTAGAAACTCTGAAGACCATCAT 57.388 37.500 0.00 0.00 0.00 2.45
3195 3539 6.634805 TGTAGAAACTCTGAAGACCATCATC 58.365 40.000 0.00 0.00 0.00 2.92
3196 3540 4.753233 AGAAACTCTGAAGACCATCATCG 58.247 43.478 0.00 0.00 0.00 3.84
3197 3541 2.593346 ACTCTGAAGACCATCATCGC 57.407 50.000 0.00 0.00 0.00 4.58
3198 3542 1.827344 ACTCTGAAGACCATCATCGCA 59.173 47.619 0.00 0.00 0.00 5.10
3199 3543 2.234661 ACTCTGAAGACCATCATCGCAA 59.765 45.455 0.00 0.00 0.00 4.85
3200 3544 3.264947 CTCTGAAGACCATCATCGCAAA 58.735 45.455 0.00 0.00 0.00 3.68
3201 3545 3.673902 TCTGAAGACCATCATCGCAAAA 58.326 40.909 0.00 0.00 0.00 2.44
3202 3546 4.071423 TCTGAAGACCATCATCGCAAAAA 58.929 39.130 0.00 0.00 0.00 1.94
3229 3573 6.908870 AAAAACTCTGAAAACCATGAAAGC 57.091 33.333 0.00 0.00 0.00 3.51
3230 3574 5.859205 AAACTCTGAAAACCATGAAAGCT 57.141 34.783 0.00 0.00 0.00 3.74
3231 3575 4.843220 ACTCTGAAAACCATGAAAGCTG 57.157 40.909 0.00 0.00 0.00 4.24
3232 3576 3.571401 ACTCTGAAAACCATGAAAGCTGG 59.429 43.478 0.00 0.00 39.80 4.85
3233 3577 2.297033 TCTGAAAACCATGAAAGCTGGC 59.703 45.455 0.00 0.00 37.27 4.85
3234 3578 2.298163 CTGAAAACCATGAAAGCTGGCT 59.702 45.455 0.00 0.00 37.27 4.75
3235 3579 2.036217 TGAAAACCATGAAAGCTGGCTG 59.964 45.455 0.00 0.00 37.27 4.85
3236 3580 1.999648 AAACCATGAAAGCTGGCTGA 58.000 45.000 0.00 0.00 37.27 4.26
3237 3581 1.999648 AACCATGAAAGCTGGCTGAA 58.000 45.000 0.00 0.00 37.27 3.02
3238 3582 2.226962 ACCATGAAAGCTGGCTGAAT 57.773 45.000 0.00 0.00 37.27 2.57
3239 3583 2.097825 ACCATGAAAGCTGGCTGAATC 58.902 47.619 0.00 0.00 37.27 2.52
3240 3584 2.291411 ACCATGAAAGCTGGCTGAATCT 60.291 45.455 0.00 0.00 37.27 2.40
3241 3585 3.054139 ACCATGAAAGCTGGCTGAATCTA 60.054 43.478 0.00 0.00 37.27 1.98
3242 3586 3.564644 CCATGAAAGCTGGCTGAATCTAG 59.435 47.826 0.00 0.00 0.00 2.43
3243 3587 3.272574 TGAAAGCTGGCTGAATCTAGG 57.727 47.619 0.00 0.00 0.00 3.02
3244 3588 2.573462 TGAAAGCTGGCTGAATCTAGGT 59.427 45.455 0.00 0.00 0.00 3.08
3248 3592 3.855668 AGCTGGCTGAATCTAGGTAGAT 58.144 45.455 0.00 0.00 44.54 1.98
3252 3596 3.898123 TGGCTGAATCTAGGTAGATCCAC 59.102 47.826 0.00 0.00 41.96 4.02
3260 3604 4.942944 TCTAGGTAGATCCACCAGAAACA 58.057 43.478 13.11 0.00 41.40 2.83
3281 3634 4.468510 ACATAAACCGACTAAGACCCATCA 59.531 41.667 0.00 0.00 0.00 3.07
3312 3665 2.594592 GCCTTGACCGTTGGCAGT 60.595 61.111 0.00 0.00 45.46 4.40
3330 3683 3.105203 CAGTAAGCACACCAACAAAACG 58.895 45.455 0.00 0.00 0.00 3.60
3332 3685 1.178276 AAGCACACCAACAAAACGGA 58.822 45.000 0.00 0.00 0.00 4.69
3338 3691 4.238514 CACACCAACAAAACGGAAAAAGA 58.761 39.130 0.00 0.00 0.00 2.52
3363 3716 7.133483 AGTAGGGAGAACATTATTCCTACACT 58.867 38.462 20.82 5.19 45.35 3.55
3365 3718 5.964477 AGGGAGAACATTATTCCTACACTGA 59.036 40.000 0.00 0.00 0.00 3.41
3376 3729 4.955811 TCCTACACTGAGACAATGTTGT 57.044 40.909 0.00 0.00 45.65 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 5.255710 AGAGATAGAGGACGTGAACAATG 57.744 43.478 0.00 0.00 0.00 2.82
23 24 4.332828 TGAAGAGATAGAGGACGTGAACA 58.667 43.478 0.00 0.00 0.00 3.18
81 94 2.035066 GCAACTCAGTGCCAAAATCAGT 59.965 45.455 0.00 0.00 38.66 3.41
103 116 7.093552 TGCAACCCTATTTTTACATGTGCTAAT 60.094 33.333 9.11 7.40 0.00 1.73
143 156 0.318360 CCACACAAGTGCTACGACGA 60.318 55.000 0.00 0.00 44.53 4.20
147 160 3.414549 AAAAACCACACAAGTGCTACG 57.585 42.857 0.00 0.00 44.53 3.51
292 308 9.461312 TGATGTAAAATACAGGAAAAGCAGTAT 57.539 29.630 0.00 0.00 42.77 2.12
293 309 8.726988 GTGATGTAAAATACAGGAAAAGCAGTA 58.273 33.333 0.00 0.00 42.77 2.74
294 310 7.230510 TGTGATGTAAAATACAGGAAAAGCAGT 59.769 33.333 0.00 0.00 42.77 4.40
295 311 7.592938 TGTGATGTAAAATACAGGAAAAGCAG 58.407 34.615 0.00 0.00 42.77 4.24
296 312 7.517614 TGTGATGTAAAATACAGGAAAAGCA 57.482 32.000 0.00 0.00 42.77 3.91
297 313 8.810652 TTTGTGATGTAAAATACAGGAAAAGC 57.189 30.769 0.00 0.00 42.77 3.51
371 388 6.061441 TGCTAGAAGGTGTGATTCTCAAAAA 58.939 36.000 0.00 0.00 38.05 1.94
372 389 5.620206 TGCTAGAAGGTGTGATTCTCAAAA 58.380 37.500 0.00 0.00 38.05 2.44
373 390 5.227569 TGCTAGAAGGTGTGATTCTCAAA 57.772 39.130 0.00 0.00 38.05 2.69
374 391 4.890158 TGCTAGAAGGTGTGATTCTCAA 57.110 40.909 0.00 0.00 38.05 3.02
375 392 5.426689 AATGCTAGAAGGTGTGATTCTCA 57.573 39.130 0.00 0.00 38.05 3.27
376 393 7.011857 CCTTTAATGCTAGAAGGTGTGATTCTC 59.988 40.741 0.00 0.00 38.05 2.87
378 395 7.020914 CCTTTAATGCTAGAAGGTGTGATTC 57.979 40.000 0.00 0.00 36.13 2.52
386 403 5.642063 TGAACGAACCTTTAATGCTAGAAGG 59.358 40.000 5.77 5.77 44.34 3.46
387 404 6.590292 TCTGAACGAACCTTTAATGCTAGAAG 59.410 38.462 0.00 0.00 0.00 2.85
388 405 6.460781 TCTGAACGAACCTTTAATGCTAGAA 58.539 36.000 0.00 0.00 0.00 2.10
389 406 6.032956 TCTGAACGAACCTTTAATGCTAGA 57.967 37.500 0.00 0.00 0.00 2.43
390 407 6.534934 GTTCTGAACGAACCTTTAATGCTAG 58.465 40.000 4.57 0.00 45.00 3.42
391 408 6.476243 GTTCTGAACGAACCTTTAATGCTA 57.524 37.500 4.57 0.00 45.00 3.49
392 409 5.358298 GTTCTGAACGAACCTTTAATGCT 57.642 39.130 4.57 0.00 45.00 3.79
428 445 7.708752 ACATGTCATACGTTTTGAACCATTTTT 59.291 29.630 0.00 0.00 0.00 1.94
429 446 7.168972 CACATGTCATACGTTTTGAACCATTTT 59.831 33.333 0.00 0.00 0.00 1.82
430 447 6.640499 CACATGTCATACGTTTTGAACCATTT 59.360 34.615 0.00 0.00 0.00 2.32
431 448 6.016693 TCACATGTCATACGTTTTGAACCATT 60.017 34.615 0.00 0.00 0.00 3.16
432 449 5.471797 TCACATGTCATACGTTTTGAACCAT 59.528 36.000 0.00 0.00 0.00 3.55
433 450 4.816925 TCACATGTCATACGTTTTGAACCA 59.183 37.500 0.00 0.00 0.00 3.67
434 451 5.351233 TCACATGTCATACGTTTTGAACC 57.649 39.130 0.00 0.00 0.00 3.62
435 452 5.794945 CCATCACATGTCATACGTTTTGAAC 59.205 40.000 0.00 0.00 0.00 3.18
436 453 5.106357 CCCATCACATGTCATACGTTTTGAA 60.106 40.000 0.00 0.00 0.00 2.69
437 454 4.394610 CCCATCACATGTCATACGTTTTGA 59.605 41.667 0.00 0.00 0.00 2.69
438 455 4.661125 CCCATCACATGTCATACGTTTTG 58.339 43.478 0.00 0.00 0.00 2.44
439 456 3.128589 GCCCATCACATGTCATACGTTTT 59.871 43.478 0.00 0.00 0.00 2.43
440 457 2.682856 GCCCATCACATGTCATACGTTT 59.317 45.455 0.00 0.00 0.00 3.60
441 458 2.288666 GCCCATCACATGTCATACGTT 58.711 47.619 0.00 0.00 0.00 3.99
442 459 1.475034 GGCCCATCACATGTCATACGT 60.475 52.381 0.00 0.00 0.00 3.57
443 460 1.229428 GGCCCATCACATGTCATACG 58.771 55.000 0.00 0.00 0.00 3.06
444 461 1.229428 CGGCCCATCACATGTCATAC 58.771 55.000 0.00 0.00 0.00 2.39
445 462 0.836606 ACGGCCCATCACATGTCATA 59.163 50.000 0.00 0.00 0.00 2.15
446 463 0.749091 CACGGCCCATCACATGTCAT 60.749 55.000 0.00 0.00 0.00 3.06
447 464 1.377072 CACGGCCCATCACATGTCA 60.377 57.895 0.00 0.00 0.00 3.58
448 465 0.676466 TTCACGGCCCATCACATGTC 60.676 55.000 0.00 0.00 0.00 3.06
449 466 0.034186 ATTCACGGCCCATCACATGT 60.034 50.000 0.00 0.00 0.00 3.21
450 467 1.603802 GTATTCACGGCCCATCACATG 59.396 52.381 0.00 0.00 0.00 3.21
451 468 1.211703 TGTATTCACGGCCCATCACAT 59.788 47.619 0.00 0.00 0.00 3.21
452 469 0.615850 TGTATTCACGGCCCATCACA 59.384 50.000 0.00 0.00 0.00 3.58
453 470 1.134521 TCTGTATTCACGGCCCATCAC 60.135 52.381 0.00 0.00 0.00 3.06
454 471 1.199615 TCTGTATTCACGGCCCATCA 58.800 50.000 0.00 0.00 0.00 3.07
455 472 2.550830 ATCTGTATTCACGGCCCATC 57.449 50.000 0.00 0.00 0.00 3.51
456 473 3.297134 AAATCTGTATTCACGGCCCAT 57.703 42.857 0.00 0.00 0.00 4.00
457 474 2.752354 CAAAATCTGTATTCACGGCCCA 59.248 45.455 0.00 0.00 0.00 5.36
458 475 2.752903 ACAAAATCTGTATTCACGGCCC 59.247 45.455 0.00 0.00 36.10 5.80
459 476 3.758300 CACAAAATCTGTATTCACGGCC 58.242 45.455 0.00 0.00 36.10 6.13
460 477 3.171277 GCACAAAATCTGTATTCACGGC 58.829 45.455 0.00 0.00 36.10 5.68
461 478 4.154015 TCTGCACAAAATCTGTATTCACGG 59.846 41.667 0.00 0.00 36.10 4.94
462 479 5.082059 GTCTGCACAAAATCTGTATTCACG 58.918 41.667 0.00 0.00 36.10 4.35
463 480 5.082059 CGTCTGCACAAAATCTGTATTCAC 58.918 41.667 0.00 0.00 36.10 3.18
464 481 4.754618 ACGTCTGCACAAAATCTGTATTCA 59.245 37.500 0.00 0.00 36.10 2.57
465 482 5.283060 ACGTCTGCACAAAATCTGTATTC 57.717 39.130 0.00 0.00 36.10 1.75
466 483 5.008613 ACAACGTCTGCACAAAATCTGTATT 59.991 36.000 0.00 0.00 36.10 1.89
467 484 4.515191 ACAACGTCTGCACAAAATCTGTAT 59.485 37.500 0.00 0.00 36.10 2.29
468 485 3.874543 ACAACGTCTGCACAAAATCTGTA 59.125 39.130 0.00 0.00 36.10 2.74
469 486 2.682856 ACAACGTCTGCACAAAATCTGT 59.317 40.909 0.00 0.00 39.56 3.41
470 487 3.338818 ACAACGTCTGCACAAAATCTG 57.661 42.857 0.00 0.00 0.00 2.90
471 488 4.370364 AAACAACGTCTGCACAAAATCT 57.630 36.364 0.00 0.00 0.00 2.40
472 489 4.560819 TGAAAACAACGTCTGCACAAAATC 59.439 37.500 0.00 0.00 0.00 2.17
473 490 4.326009 GTGAAAACAACGTCTGCACAAAAT 59.674 37.500 0.00 0.00 0.00 1.82
474 491 3.670991 GTGAAAACAACGTCTGCACAAAA 59.329 39.130 0.00 0.00 0.00 2.44
475 492 3.238441 GTGAAAACAACGTCTGCACAAA 58.762 40.909 0.00 0.00 0.00 2.83
476 493 2.726373 CGTGAAAACAACGTCTGCACAA 60.726 45.455 0.00 0.00 36.31 3.33
477 494 1.201976 CGTGAAAACAACGTCTGCACA 60.202 47.619 0.00 0.00 36.31 4.57
478 495 1.452717 CGTGAAAACAACGTCTGCAC 58.547 50.000 0.00 0.00 36.31 4.57
479 496 0.375454 CCGTGAAAACAACGTCTGCA 59.625 50.000 0.00 0.00 39.38 4.41
480 497 0.928451 GCCGTGAAAACAACGTCTGC 60.928 55.000 0.00 0.00 39.38 4.26
481 498 0.653323 CGCCGTGAAAACAACGTCTG 60.653 55.000 0.00 0.00 39.38 3.51
482 499 1.085501 ACGCCGTGAAAACAACGTCT 61.086 50.000 0.00 0.00 39.38 4.18
483 500 0.922111 CACGCCGTGAAAACAACGTC 60.922 55.000 12.85 0.00 39.38 4.34
484 501 1.061253 CACGCCGTGAAAACAACGT 59.939 52.632 12.85 0.00 39.38 3.99
485 502 0.653323 CTCACGCCGTGAAAACAACG 60.653 55.000 21.56 3.65 42.26 4.10
486 503 0.316689 CCTCACGCCGTGAAAACAAC 60.317 55.000 21.56 0.00 42.26 3.32
487 504 1.440938 CCCTCACGCCGTGAAAACAA 61.441 55.000 21.56 0.00 42.26 2.83
488 505 1.890041 CCCTCACGCCGTGAAAACA 60.890 57.895 21.56 0.00 42.26 2.83
489 506 1.566018 CTCCCTCACGCCGTGAAAAC 61.566 60.000 21.56 0.00 42.26 2.43
490 507 1.301401 CTCCCTCACGCCGTGAAAA 60.301 57.895 21.56 8.38 42.26 2.29
491 508 2.342279 CTCCCTCACGCCGTGAAA 59.658 61.111 21.56 8.73 42.26 2.69
492 509 4.373116 GCTCCCTCACGCCGTGAA 62.373 66.667 21.56 5.64 42.26 3.18
499 516 3.356639 TAAGCGCTGCTCCCTCACG 62.357 63.158 12.58 0.00 38.25 4.35
500 517 1.811679 GTAAGCGCTGCTCCCTCAC 60.812 63.158 12.58 0.00 38.25 3.51
501 518 1.984570 AGTAAGCGCTGCTCCCTCA 60.985 57.895 12.58 0.00 38.25 3.86
502 519 1.520342 CAGTAAGCGCTGCTCCCTC 60.520 63.158 12.58 0.00 38.25 4.30
503 520 1.831652 AACAGTAAGCGCTGCTCCCT 61.832 55.000 12.58 0.00 38.25 4.20
504 521 1.362406 GAACAGTAAGCGCTGCTCCC 61.362 60.000 12.58 0.00 38.25 4.30
505 522 1.362406 GGAACAGTAAGCGCTGCTCC 61.362 60.000 12.58 5.78 42.32 4.70
506 523 1.687494 CGGAACAGTAAGCGCTGCTC 61.687 60.000 12.58 4.45 38.25 4.26
507 524 1.738099 CGGAACAGTAAGCGCTGCT 60.738 57.895 12.58 10.19 42.56 4.24
508 525 2.027625 ACGGAACAGTAAGCGCTGC 61.028 57.895 12.58 7.52 39.96 5.25
509 526 1.626654 CCACGGAACAGTAAGCGCTG 61.627 60.000 12.58 0.41 41.92 5.18
510 527 1.374252 CCACGGAACAGTAAGCGCT 60.374 57.895 2.64 2.64 0.00 5.92
511 528 2.388232 CCCACGGAACAGTAAGCGC 61.388 63.158 0.00 0.00 0.00 5.92
512 529 1.005394 ACCCACGGAACAGTAAGCG 60.005 57.895 0.00 0.00 0.00 4.68
513 530 0.672711 GGACCCACGGAACAGTAAGC 60.673 60.000 0.00 0.00 0.00 3.09
514 531 0.389426 CGGACCCACGGAACAGTAAG 60.389 60.000 0.00 0.00 0.00 2.34
515 532 1.667151 CGGACCCACGGAACAGTAA 59.333 57.895 0.00 0.00 0.00 2.24
516 533 2.934570 GCGGACCCACGGAACAGTA 61.935 63.158 0.00 0.00 0.00 2.74
517 534 4.309950 GCGGACCCACGGAACAGT 62.310 66.667 0.00 0.00 0.00 3.55
518 535 4.308458 TGCGGACCCACGGAACAG 62.308 66.667 0.00 0.00 0.00 3.16
519 536 4.612412 GTGCGGACCCACGGAACA 62.612 66.667 0.00 0.00 35.54 3.18
524 541 4.742201 CTCTGGTGCGGACCCACG 62.742 72.222 24.47 11.96 42.34 4.94
525 542 3.591254 GACTCTGGTGCGGACCCAC 62.591 68.421 24.47 2.66 42.34 4.61
526 543 3.311110 GACTCTGGTGCGGACCCA 61.311 66.667 24.47 9.21 42.34 4.51
527 544 4.083862 GGACTCTGGTGCGGACCC 62.084 72.222 24.47 7.22 42.34 4.46
528 545 1.255667 TAAGGACTCTGGTGCGGACC 61.256 60.000 20.69 20.69 43.48 4.46
529 546 0.606604 TTAAGGACTCTGGTGCGGAC 59.393 55.000 0.00 0.00 38.85 4.79
530 547 1.207089 CATTAAGGACTCTGGTGCGGA 59.793 52.381 0.00 0.00 38.85 5.54
531 548 1.066143 ACATTAAGGACTCTGGTGCGG 60.066 52.381 0.00 0.00 38.85 5.69
532 549 2.002586 CACATTAAGGACTCTGGTGCG 58.997 52.381 0.00 0.00 38.85 5.34
533 550 2.744202 CACACATTAAGGACTCTGGTGC 59.256 50.000 0.00 0.00 0.00 5.01
534 551 3.338249 CCACACATTAAGGACTCTGGTG 58.662 50.000 0.00 0.00 0.00 4.17
535 552 2.290323 GCCACACATTAAGGACTCTGGT 60.290 50.000 0.00 0.00 0.00 4.00
536 553 2.359900 GCCACACATTAAGGACTCTGG 58.640 52.381 0.00 0.00 0.00 3.86
537 554 2.002586 CGCCACACATTAAGGACTCTG 58.997 52.381 0.00 0.00 0.00 3.35
538 555 1.623811 ACGCCACACATTAAGGACTCT 59.376 47.619 0.00 0.00 0.00 3.24
539 556 2.094762 ACGCCACACATTAAGGACTC 57.905 50.000 0.00 0.00 0.00 3.36
540 557 2.151202 CAACGCCACACATTAAGGACT 58.849 47.619 0.00 0.00 0.00 3.85
541 558 1.401018 GCAACGCCACACATTAAGGAC 60.401 52.381 0.00 0.00 0.00 3.85
542 559 0.878416 GCAACGCCACACATTAAGGA 59.122 50.000 0.00 0.00 0.00 3.36
543 560 0.454285 CGCAACGCCACACATTAAGG 60.454 55.000 0.00 0.00 0.00 2.69
544 561 0.237235 ACGCAACGCCACACATTAAG 59.763 50.000 0.00 0.00 0.00 1.85
545 562 1.194997 GTACGCAACGCCACACATTAA 59.805 47.619 0.00 0.00 0.00 1.40
546 563 0.791422 GTACGCAACGCCACACATTA 59.209 50.000 0.00 0.00 0.00 1.90
547 564 1.160946 TGTACGCAACGCCACACATT 61.161 50.000 0.00 0.00 0.00 2.71
548 565 1.565156 CTGTACGCAACGCCACACAT 61.565 55.000 0.00 0.00 0.00 3.21
549 566 2.202892 TGTACGCAACGCCACACA 60.203 55.556 0.00 0.00 0.00 3.72
550 567 2.549282 CTGTACGCAACGCCACAC 59.451 61.111 0.00 0.00 0.00 3.82
551 568 3.342627 GCTGTACGCAACGCCACA 61.343 61.111 5.07 0.00 38.92 4.17
560 577 1.202222 ACGTGGTATACTGCTGTACGC 60.202 52.381 13.71 6.81 39.77 4.42
561 578 2.838386 ACGTGGTATACTGCTGTACG 57.162 50.000 12.60 12.60 0.00 3.67
562 579 4.100707 TGAACGTGGTATACTGCTGTAC 57.899 45.455 5.50 0.00 0.00 2.90
563 580 4.787260 TTGAACGTGGTATACTGCTGTA 57.213 40.909 5.87 5.87 0.00 2.74
564 581 3.671008 TTGAACGTGGTATACTGCTGT 57.329 42.857 2.25 0.66 0.00 4.40
565 582 3.242413 GCATTGAACGTGGTATACTGCTG 60.242 47.826 2.25 0.00 0.00 4.41
566 583 2.936498 GCATTGAACGTGGTATACTGCT 59.064 45.455 2.25 0.00 0.00 4.24
567 584 2.285602 CGCATTGAACGTGGTATACTGC 60.286 50.000 2.25 0.61 0.00 4.40
568 585 3.183754 TCGCATTGAACGTGGTATACTG 58.816 45.455 2.25 0.00 0.00 2.74
569 586 3.444916 CTCGCATTGAACGTGGTATACT 58.555 45.455 2.25 0.00 0.00 2.12
570 587 2.034001 GCTCGCATTGAACGTGGTATAC 60.034 50.000 0.00 0.00 0.00 1.47
571 588 2.198406 GCTCGCATTGAACGTGGTATA 58.802 47.619 0.00 0.00 0.00 1.47
572 589 1.006832 GCTCGCATTGAACGTGGTAT 58.993 50.000 0.00 0.00 0.00 2.73
573 590 1.017177 GGCTCGCATTGAACGTGGTA 61.017 55.000 0.00 0.00 0.00 3.25
574 591 2.325082 GGCTCGCATTGAACGTGGT 61.325 57.895 0.00 0.00 0.00 4.16
575 592 2.480555 GGCTCGCATTGAACGTGG 59.519 61.111 0.00 0.00 0.00 4.94
576 593 2.244436 CTGGGCTCGCATTGAACGTG 62.244 60.000 0.00 0.00 0.00 4.49
577 594 2.031919 TGGGCTCGCATTGAACGT 59.968 55.556 0.00 0.00 0.00 3.99
578 595 1.970917 GACTGGGCTCGCATTGAACG 61.971 60.000 0.00 0.00 0.00 3.95
579 596 0.674895 AGACTGGGCTCGCATTGAAC 60.675 55.000 0.00 0.00 0.00 3.18
580 597 0.391661 GAGACTGGGCTCGCATTGAA 60.392 55.000 0.00 0.00 0.00 2.69
581 598 1.219124 GAGACTGGGCTCGCATTGA 59.781 57.895 0.00 0.00 0.00 2.57
582 599 1.817099 GGAGACTGGGCTCGCATTG 60.817 63.158 0.00 0.00 35.74 2.82
583 600 2.586792 GGAGACTGGGCTCGCATT 59.413 61.111 0.00 0.00 35.74 3.56
584 601 3.842923 CGGAGACTGGGCTCGCAT 61.843 66.667 0.00 0.00 35.74 4.73
586 603 3.492311 GATCGGAGACTGGGCTCGC 62.492 68.421 0.00 0.00 42.51 5.03
587 604 2.725008 GATCGGAGACTGGGCTCG 59.275 66.667 0.00 0.00 42.51 5.03
588 605 2.503382 GGGATCGGAGACTGGGCTC 61.503 68.421 0.00 0.00 42.51 4.70
589 606 2.444895 GGGATCGGAGACTGGGCT 60.445 66.667 0.00 0.00 42.51 5.19
590 607 2.367202 TTGGGATCGGAGACTGGGC 61.367 63.158 0.00 0.00 42.51 5.36
591 608 1.522569 GTTGGGATCGGAGACTGGG 59.477 63.158 0.00 0.00 42.51 4.45
592 609 1.141881 CGTTGGGATCGGAGACTGG 59.858 63.158 0.00 0.00 42.51 4.00
593 610 0.101399 CTCGTTGGGATCGGAGACTG 59.899 60.000 0.00 0.00 42.51 3.51
594 611 0.034380 TCTCGTTGGGATCGGAGACT 60.034 55.000 0.00 0.00 42.51 3.24
595 612 0.815734 TTCTCGTTGGGATCGGAGAC 59.184 55.000 0.00 0.00 42.51 3.36
596 613 0.815734 GTTCTCGTTGGGATCGGAGA 59.184 55.000 0.00 0.00 45.75 3.71
597 614 0.530744 TGTTCTCGTTGGGATCGGAG 59.469 55.000 0.00 0.00 0.00 4.63
598 615 0.970640 TTGTTCTCGTTGGGATCGGA 59.029 50.000 0.00 0.00 0.00 4.55
599 616 1.359848 CTTGTTCTCGTTGGGATCGG 58.640 55.000 0.00 0.00 0.00 4.18
600 617 0.721718 GCTTGTTCTCGTTGGGATCG 59.278 55.000 0.00 0.00 0.00 3.69
601 618 0.721718 CGCTTGTTCTCGTTGGGATC 59.278 55.000 0.00 0.00 0.00 3.36
602 619 1.298859 GCGCTTGTTCTCGTTGGGAT 61.299 55.000 0.00 0.00 0.00 3.85
603 620 1.959226 GCGCTTGTTCTCGTTGGGA 60.959 57.895 0.00 0.00 0.00 4.37
604 621 2.250939 TGCGCTTGTTCTCGTTGGG 61.251 57.895 9.73 0.00 0.00 4.12
605 622 1.082756 GTGCGCTTGTTCTCGTTGG 60.083 57.895 9.73 0.00 0.00 3.77
606 623 0.027455 TTGTGCGCTTGTTCTCGTTG 59.973 50.000 9.73 0.00 0.00 4.10
607 624 0.730265 TTTGTGCGCTTGTTCTCGTT 59.270 45.000 9.73 0.00 0.00 3.85
608 625 0.304705 CTTTGTGCGCTTGTTCTCGT 59.695 50.000 9.73 0.00 0.00 4.18
609 626 0.581529 TCTTTGTGCGCTTGTTCTCG 59.418 50.000 9.73 0.00 0.00 4.04
610 627 2.977405 ATCTTTGTGCGCTTGTTCTC 57.023 45.000 9.73 0.00 0.00 2.87
611 628 3.563808 TGTTATCTTTGTGCGCTTGTTCT 59.436 39.130 9.73 0.00 0.00 3.01
612 629 3.884169 TGTTATCTTTGTGCGCTTGTTC 58.116 40.909 9.73 0.00 0.00 3.18
613 630 3.980646 TGTTATCTTTGTGCGCTTGTT 57.019 38.095 9.73 0.00 0.00 2.83
614 631 3.253188 ACATGTTATCTTTGTGCGCTTGT 59.747 39.130 9.73 0.00 0.00 3.16
615 632 3.605056 CACATGTTATCTTTGTGCGCTTG 59.395 43.478 9.73 0.00 34.89 4.01
616 633 3.825308 CACATGTTATCTTTGTGCGCTT 58.175 40.909 9.73 0.00 34.89 4.68
617 634 3.476295 CACATGTTATCTTTGTGCGCT 57.524 42.857 9.73 0.00 34.89 5.92
621 638 3.504863 GCCTGCACATGTTATCTTTGTG 58.495 45.455 0.00 0.00 42.80 3.33
622 639 2.162208 CGCCTGCACATGTTATCTTTGT 59.838 45.455 0.00 0.00 0.00 2.83
623 640 2.419673 TCGCCTGCACATGTTATCTTTG 59.580 45.455 0.00 0.00 0.00 2.77
624 641 2.679837 CTCGCCTGCACATGTTATCTTT 59.320 45.455 0.00 0.00 0.00 2.52
625 642 2.283298 CTCGCCTGCACATGTTATCTT 58.717 47.619 0.00 0.00 0.00 2.40
626 643 1.473965 CCTCGCCTGCACATGTTATCT 60.474 52.381 0.00 0.00 0.00 1.98
627 644 0.940126 CCTCGCCTGCACATGTTATC 59.060 55.000 0.00 0.00 0.00 1.75
628 645 0.541392 TCCTCGCCTGCACATGTTAT 59.459 50.000 0.00 0.00 0.00 1.89
629 646 0.391130 GTCCTCGCCTGCACATGTTA 60.391 55.000 0.00 0.00 0.00 2.41
630 647 1.672356 GTCCTCGCCTGCACATGTT 60.672 57.895 0.00 0.00 0.00 2.71
631 648 2.046892 GTCCTCGCCTGCACATGT 60.047 61.111 0.00 0.00 0.00 3.21
632 649 3.190849 CGTCCTCGCCTGCACATG 61.191 66.667 0.00 0.00 0.00 3.21
633 650 3.362399 CTCGTCCTCGCCTGCACAT 62.362 63.158 0.00 0.00 36.96 3.21
634 651 4.056125 CTCGTCCTCGCCTGCACA 62.056 66.667 0.00 0.00 36.96 4.57
638 655 3.691744 GAGTGCTCGTCCTCGCCTG 62.692 68.421 0.00 0.00 36.96 4.85
639 656 3.444805 GAGTGCTCGTCCTCGCCT 61.445 66.667 0.00 0.00 36.96 5.52
640 657 4.500116 GGAGTGCTCGTCCTCGCC 62.500 72.222 0.00 0.00 36.96 5.54
641 658 1.448922 ATAGGAGTGCTCGTCCTCGC 61.449 60.000 5.47 0.00 43.81 5.03
642 659 0.309302 CATAGGAGTGCTCGTCCTCG 59.691 60.000 5.47 0.00 43.81 4.63
643 660 0.671251 CCATAGGAGTGCTCGTCCTC 59.329 60.000 5.47 0.00 43.81 3.71
644 661 0.259065 TCCATAGGAGTGCTCGTCCT 59.741 55.000 7.18 7.18 46.69 3.85
645 662 1.333177 ATCCATAGGAGTGCTCGTCC 58.667 55.000 0.00 0.00 34.05 4.79
646 663 3.460857 AAATCCATAGGAGTGCTCGTC 57.539 47.619 0.00 0.00 34.05 4.20
647 664 3.738281 CGAAAATCCATAGGAGTGCTCGT 60.738 47.826 8.98 0.09 33.96 4.18
648 665 2.797156 CGAAAATCCATAGGAGTGCTCG 59.203 50.000 0.00 4.58 34.05 5.03
649 666 4.060038 TCGAAAATCCATAGGAGTGCTC 57.940 45.455 0.00 0.00 34.05 4.26
650 667 4.696479 ATCGAAAATCCATAGGAGTGCT 57.304 40.909 0.00 0.00 34.05 4.40
651 668 4.555511 GCAATCGAAAATCCATAGGAGTGC 60.556 45.833 0.00 0.00 38.13 4.40
652 669 4.818546 AGCAATCGAAAATCCATAGGAGTG 59.181 41.667 0.00 0.00 34.05 3.51
653 670 5.041191 AGCAATCGAAAATCCATAGGAGT 57.959 39.130 0.00 0.00 34.05 3.85
654 671 8.954950 ATATAGCAATCGAAAATCCATAGGAG 57.045 34.615 0.00 0.00 34.05 3.69
655 672 9.817809 GTATATAGCAATCGAAAATCCATAGGA 57.182 33.333 0.00 0.00 35.55 2.94
656 673 9.823647 AGTATATAGCAATCGAAAATCCATAGG 57.176 33.333 0.00 0.00 0.00 2.57
658 675 9.817809 GGAGTATATAGCAATCGAAAATCCATA 57.182 33.333 0.00 0.00 0.00 2.74
659 676 7.770897 GGGAGTATATAGCAATCGAAAATCCAT 59.229 37.037 0.00 0.00 0.00 3.41
660 677 7.038302 AGGGAGTATATAGCAATCGAAAATCCA 60.038 37.037 0.00 0.00 0.00 3.41
661 678 7.331791 AGGGAGTATATAGCAATCGAAAATCC 58.668 38.462 0.00 0.00 0.00 3.01
662 679 7.492994 GGAGGGAGTATATAGCAATCGAAAATC 59.507 40.741 0.00 0.00 0.00 2.17
663 680 7.331791 GGAGGGAGTATATAGCAATCGAAAAT 58.668 38.462 0.00 0.00 0.00 1.82
664 681 6.571731 CGGAGGGAGTATATAGCAATCGAAAA 60.572 42.308 0.00 0.00 0.00 2.29
665 682 5.105877 CGGAGGGAGTATATAGCAATCGAAA 60.106 44.000 0.00 0.00 0.00 3.46
666 683 4.398358 CGGAGGGAGTATATAGCAATCGAA 59.602 45.833 0.00 0.00 0.00 3.71
667 684 3.945921 CGGAGGGAGTATATAGCAATCGA 59.054 47.826 0.00 0.00 0.00 3.59
668 685 3.695060 ACGGAGGGAGTATATAGCAATCG 59.305 47.826 0.00 0.00 0.00 3.34
669 686 5.394333 GGAACGGAGGGAGTATATAGCAATC 60.394 48.000 0.00 0.00 0.00 2.67
670 687 4.466726 GGAACGGAGGGAGTATATAGCAAT 59.533 45.833 0.00 0.00 0.00 3.56
671 688 3.830755 GGAACGGAGGGAGTATATAGCAA 59.169 47.826 0.00 0.00 0.00 3.91
672 689 3.181426 TGGAACGGAGGGAGTATATAGCA 60.181 47.826 0.00 0.00 0.00 3.49
673 690 3.428532 TGGAACGGAGGGAGTATATAGC 58.571 50.000 0.00 0.00 0.00 2.97
674 691 6.415206 TTTTGGAACGGAGGGAGTATATAG 57.585 41.667 0.00 0.00 0.00 1.31
675 692 8.674925 ATATTTTGGAACGGAGGGAGTATATA 57.325 34.615 0.00 0.00 0.00 0.86
676 693 5.906772 ATTTTGGAACGGAGGGAGTATAT 57.093 39.130 0.00 0.00 0.00 0.86
677 694 7.310237 GCTATATTTTGGAACGGAGGGAGTATA 60.310 40.741 0.00 0.00 0.00 1.47
678 695 5.906772 ATATTTTGGAACGGAGGGAGTAT 57.093 39.130 0.00 0.00 0.00 2.12
679 696 5.221581 GCTATATTTTGGAACGGAGGGAGTA 60.222 44.000 0.00 0.00 0.00 2.59
680 697 4.444449 GCTATATTTTGGAACGGAGGGAGT 60.444 45.833 0.00 0.00 0.00 3.85
681 698 4.065789 GCTATATTTTGGAACGGAGGGAG 58.934 47.826 0.00 0.00 0.00 4.30
682 699 3.493699 CGCTATATTTTGGAACGGAGGGA 60.494 47.826 0.00 0.00 0.00 4.20
683 700 2.806244 CGCTATATTTTGGAACGGAGGG 59.194 50.000 0.00 0.00 0.00 4.30
684 701 2.223377 GCGCTATATTTTGGAACGGAGG 59.777 50.000 0.00 0.00 0.00 4.30
685 702 2.096909 CGCGCTATATTTTGGAACGGAG 60.097 50.000 5.56 0.00 0.00 4.63
686 703 1.862201 CGCGCTATATTTTGGAACGGA 59.138 47.619 5.56 0.00 0.00 4.69
687 704 1.659211 GCGCGCTATATTTTGGAACGG 60.659 52.381 26.67 0.00 0.00 4.44
688 705 1.658968 GCGCGCTATATTTTGGAACG 58.341 50.000 26.67 0.00 0.00 3.95
689 706 1.334689 GGGCGCGCTATATTTTGGAAC 60.335 52.381 32.29 8.93 0.00 3.62
690 707 0.948678 GGGCGCGCTATATTTTGGAA 59.051 50.000 32.29 0.00 0.00 3.53
691 708 0.179043 TGGGCGCGCTATATTTTGGA 60.179 50.000 32.29 0.00 0.00 3.53
692 709 0.040425 GTGGGCGCGCTATATTTTGG 60.040 55.000 32.29 0.00 0.00 3.28
693 710 0.384230 CGTGGGCGCGCTATATTTTG 60.384 55.000 32.29 9.06 0.00 2.44
694 711 1.938861 CGTGGGCGCGCTATATTTT 59.061 52.632 32.29 0.00 0.00 1.82
695 712 3.637714 CGTGGGCGCGCTATATTT 58.362 55.556 32.29 0.00 0.00 1.40
705 722 3.788766 CCTCGAAAAGCGTGGGCG 61.789 66.667 0.00 0.00 46.89 6.13
709 726 1.597663 AGTTGAACCTCGAAAAGCGTG 59.402 47.619 0.00 0.00 41.80 5.34
710 727 1.949465 AGTTGAACCTCGAAAAGCGT 58.051 45.000 0.00 0.00 41.80 5.07
711 728 3.035942 CAAAGTTGAACCTCGAAAAGCG 58.964 45.455 0.00 0.00 42.69 4.68
712 729 4.035684 GTCAAAGTTGAACCTCGAAAAGC 58.964 43.478 0.00 0.00 39.21 3.51
713 730 4.095782 TGGTCAAAGTTGAACCTCGAAAAG 59.904 41.667 6.62 0.00 44.20 2.27
714 731 4.011023 TGGTCAAAGTTGAACCTCGAAAA 58.989 39.130 6.62 0.00 44.20 2.29
715 732 3.611970 TGGTCAAAGTTGAACCTCGAAA 58.388 40.909 6.62 0.00 44.20 3.46
716 733 3.269538 TGGTCAAAGTTGAACCTCGAA 57.730 42.857 6.62 0.00 44.20 3.71
717 734 2.992124 TGGTCAAAGTTGAACCTCGA 57.008 45.000 6.62 0.00 44.20 4.04
718 735 5.682943 TTTATGGTCAAAGTTGAACCTCG 57.317 39.130 6.62 0.00 44.20 4.63
719 736 9.974980 TTAAATTTATGGTCAAAGTTGAACCTC 57.025 29.630 6.62 0.00 44.20 3.85
720 737 9.758651 GTTAAATTTATGGTCAAAGTTGAACCT 57.241 29.630 6.62 0.00 44.20 3.50
721 738 8.984764 GGTTAAATTTATGGTCAAAGTTGAACC 58.015 33.333 6.62 6.25 44.20 3.62
722 739 8.984764 GGGTTAAATTTATGGTCAAAGTTGAAC 58.015 33.333 1.98 1.98 45.04 3.18
723 740 8.705594 TGGGTTAAATTTATGGTCAAAGTTGAA 58.294 29.630 0.00 0.00 39.21 2.69
724 741 8.145122 GTGGGTTAAATTTATGGTCAAAGTTGA 58.855 33.333 0.00 0.00 34.20 3.18
725 742 7.115663 CGTGGGTTAAATTTATGGTCAAAGTTG 59.884 37.037 0.00 0.00 29.44 3.16
726 743 7.014422 TCGTGGGTTAAATTTATGGTCAAAGTT 59.986 33.333 0.00 0.00 31.36 2.66
727 744 6.490721 TCGTGGGTTAAATTTATGGTCAAAGT 59.509 34.615 0.00 0.00 0.00 2.66
728 745 6.915349 TCGTGGGTTAAATTTATGGTCAAAG 58.085 36.000 0.00 0.00 0.00 2.77
729 746 6.715718 TCTCGTGGGTTAAATTTATGGTCAAA 59.284 34.615 0.00 0.00 0.00 2.69
730 747 6.149807 GTCTCGTGGGTTAAATTTATGGTCAA 59.850 38.462 0.00 0.00 0.00 3.18
731 748 5.644636 GTCTCGTGGGTTAAATTTATGGTCA 59.355 40.000 0.00 0.00 0.00 4.02
732 749 5.065602 GGTCTCGTGGGTTAAATTTATGGTC 59.934 44.000 0.00 0.00 0.00 4.02
733 750 4.945543 GGTCTCGTGGGTTAAATTTATGGT 59.054 41.667 0.00 0.00 0.00 3.55
734 751 4.034742 CGGTCTCGTGGGTTAAATTTATGG 59.965 45.833 0.00 0.00 0.00 2.74
735 752 4.871557 TCGGTCTCGTGGGTTAAATTTATG 59.128 41.667 0.00 0.00 37.69 1.90
736 753 4.872124 GTCGGTCTCGTGGGTTAAATTTAT 59.128 41.667 0.00 0.00 37.69 1.40
737 754 4.021192 AGTCGGTCTCGTGGGTTAAATTTA 60.021 41.667 0.00 0.00 37.69 1.40
738 755 3.069289 GTCGGTCTCGTGGGTTAAATTT 58.931 45.455 0.00 0.00 37.69 1.82
739 756 2.301009 AGTCGGTCTCGTGGGTTAAATT 59.699 45.455 0.00 0.00 37.69 1.82
740 757 1.897802 AGTCGGTCTCGTGGGTTAAAT 59.102 47.619 0.00 0.00 37.69 1.40
741 758 1.000060 CAGTCGGTCTCGTGGGTTAAA 60.000 52.381 0.00 0.00 37.69 1.52
742 759 0.599558 CAGTCGGTCTCGTGGGTTAA 59.400 55.000 0.00 0.00 37.69 2.01
743 760 1.870055 GCAGTCGGTCTCGTGGGTTA 61.870 60.000 0.00 0.00 37.69 2.85
744 761 3.048602 CAGTCGGTCTCGTGGGTT 58.951 61.111 0.00 0.00 37.69 4.11
745 762 3.681835 GCAGTCGGTCTCGTGGGT 61.682 66.667 0.00 0.00 37.69 4.51
746 763 4.778415 CGCAGTCGGTCTCGTGGG 62.778 72.222 0.00 0.00 37.69 4.61
756 773 1.363145 TTTTTATCCCGCCGCAGTCG 61.363 55.000 0.00 0.00 0.00 4.18
757 774 2.473457 TTTTTATCCCGCCGCAGTC 58.527 52.632 0.00 0.00 0.00 3.51
758 775 4.726334 TTTTTATCCCGCCGCAGT 57.274 50.000 0.00 0.00 0.00 4.40
835 852 1.148310 AATCAACAAGACCGACTGCG 58.852 50.000 0.00 0.00 37.24 5.18
836 853 4.742438 TTTAATCAACAAGACCGACTGC 57.258 40.909 0.00 0.00 0.00 4.40
837 854 9.277565 CATTAATTTAATCAACAAGACCGACTG 57.722 33.333 0.00 0.00 0.00 3.51
838 855 8.458843 CCATTAATTTAATCAACAAGACCGACT 58.541 33.333 0.00 0.00 0.00 4.18
839 856 8.241367 ACCATTAATTTAATCAACAAGACCGAC 58.759 33.333 0.00 0.00 0.00 4.79
840 857 8.343168 ACCATTAATTTAATCAACAAGACCGA 57.657 30.769 0.00 0.00 0.00 4.69
841 858 8.240682 TGACCATTAATTTAATCAACAAGACCG 58.759 33.333 0.00 0.00 0.00 4.79
842 859 9.921637 TTGACCATTAATTTAATCAACAAGACC 57.078 29.630 0.00 0.00 0.00 3.85
852 869 9.995003 TGCTTCAACTTTGACCATTAATTTAAT 57.005 25.926 0.00 0.00 36.83 1.40
853 870 9.255304 GTGCTTCAACTTTGACCATTAATTTAA 57.745 29.630 0.00 0.00 36.83 1.52
854 871 7.593273 CGTGCTTCAACTTTGACCATTAATTTA 59.407 33.333 0.00 0.00 36.83 1.40
855 872 6.420604 CGTGCTTCAACTTTGACCATTAATTT 59.579 34.615 0.00 0.00 36.83 1.82
856 873 5.920273 CGTGCTTCAACTTTGACCATTAATT 59.080 36.000 0.00 0.00 36.83 1.40
857 874 5.460646 CGTGCTTCAACTTTGACCATTAAT 58.539 37.500 0.00 0.00 36.83 1.40
858 875 4.261405 CCGTGCTTCAACTTTGACCATTAA 60.261 41.667 0.00 0.00 36.83 1.40
859 876 3.252215 CCGTGCTTCAACTTTGACCATTA 59.748 43.478 0.00 0.00 36.83 1.90
860 877 2.034558 CCGTGCTTCAACTTTGACCATT 59.965 45.455 0.00 0.00 36.83 3.16
861 878 1.608590 CCGTGCTTCAACTTTGACCAT 59.391 47.619 0.00 0.00 36.83 3.55
862 879 1.021202 CCGTGCTTCAACTTTGACCA 58.979 50.000 0.00 0.00 36.83 4.02
863 880 1.305201 TCCGTGCTTCAACTTTGACC 58.695 50.000 0.00 0.00 36.83 4.02
864 881 3.105937 GTTTCCGTGCTTCAACTTTGAC 58.894 45.455 0.00 0.00 36.83 3.18
865 882 2.098443 GGTTTCCGTGCTTCAACTTTGA 59.902 45.455 0.00 0.00 34.92 2.69
866 883 2.459934 GGTTTCCGTGCTTCAACTTTG 58.540 47.619 0.00 0.00 0.00 2.77
867 884 1.064952 CGGTTTCCGTGCTTCAACTTT 59.935 47.619 0.00 0.00 42.73 2.66
868 885 0.661020 CGGTTTCCGTGCTTCAACTT 59.339 50.000 0.00 0.00 42.73 2.66
869 886 2.317230 CGGTTTCCGTGCTTCAACT 58.683 52.632 0.00 0.00 42.73 3.16
870 887 4.914291 CGGTTTCCGTGCTTCAAC 57.086 55.556 0.00 0.00 42.73 3.18
880 897 2.624437 ATAGCGCGTCCTCGGTTTCC 62.624 60.000 8.43 0.00 40.82 3.13
881 898 0.029834 TATAGCGCGTCCTCGGTTTC 59.970 55.000 8.43 0.00 40.82 2.78
882 899 0.672342 ATATAGCGCGTCCTCGGTTT 59.328 50.000 8.43 0.00 40.82 3.27
883 900 0.672342 AATATAGCGCGTCCTCGGTT 59.328 50.000 8.43 0.00 40.82 4.44
884 901 0.672342 AAATATAGCGCGTCCTCGGT 59.328 50.000 8.43 0.00 43.07 4.69
885 902 1.455786 CAAAATATAGCGCGTCCTCGG 59.544 52.381 8.43 0.00 37.56 4.63
886 903 1.455786 CCAAAATATAGCGCGTCCTCG 59.544 52.381 8.43 0.00 40.37 4.63
887 904 2.750948 TCCAAAATATAGCGCGTCCTC 58.249 47.619 8.43 0.00 0.00 3.71
888 905 2.870411 GTTCCAAAATATAGCGCGTCCT 59.130 45.455 8.43 0.00 0.00 3.85
889 906 2.348218 CGTTCCAAAATATAGCGCGTCC 60.348 50.000 8.43 0.00 0.00 4.79
890 907 2.348218 CCGTTCCAAAATATAGCGCGTC 60.348 50.000 8.43 0.00 0.00 5.19
891 908 1.595794 CCGTTCCAAAATATAGCGCGT 59.404 47.619 8.43 0.00 0.00 6.01
892 909 1.862201 TCCGTTCCAAAATATAGCGCG 59.138 47.619 0.00 0.00 0.00 6.86
893 910 2.223377 CCTCCGTTCCAAAATATAGCGC 59.777 50.000 0.00 0.00 0.00 5.92
894 911 2.806244 CCCTCCGTTCCAAAATATAGCG 59.194 50.000 0.00 0.00 0.00 4.26
895 912 4.065789 CTCCCTCCGTTCCAAAATATAGC 58.934 47.826 0.00 0.00 0.00 2.97
896 913 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
897 914 6.811634 TTACTCCCTCCGTTCCAAAATATA 57.188 37.500 0.00 0.00 0.00 0.86
898 915 5.703730 TTACTCCCTCCGTTCCAAAATAT 57.296 39.130 0.00 0.00 0.00 1.28
899 916 5.502089 TTTACTCCCTCCGTTCCAAAATA 57.498 39.130 0.00 0.00 0.00 1.40
900 917 4.376225 TTTACTCCCTCCGTTCCAAAAT 57.624 40.909 0.00 0.00 0.00 1.82
901 918 3.860968 TTTACTCCCTCCGTTCCAAAA 57.139 42.857 0.00 0.00 0.00 2.44
902 919 3.497227 CCTTTTACTCCCTCCGTTCCAAA 60.497 47.826 0.00 0.00 0.00 3.28
903 920 2.039348 CCTTTTACTCCCTCCGTTCCAA 59.961 50.000 0.00 0.00 0.00 3.53
904 921 1.626825 CCTTTTACTCCCTCCGTTCCA 59.373 52.381 0.00 0.00 0.00 3.53
905 922 1.904537 TCCTTTTACTCCCTCCGTTCC 59.095 52.381 0.00 0.00 0.00 3.62
906 923 3.690475 TTCCTTTTACTCCCTCCGTTC 57.310 47.619 0.00 0.00 0.00 3.95
907 924 3.136992 TGTTTCCTTTTACTCCCTCCGTT 59.863 43.478 0.00 0.00 0.00 4.44
908 925 2.707257 TGTTTCCTTTTACTCCCTCCGT 59.293 45.455 0.00 0.00 0.00 4.69
909 926 3.412237 TGTTTCCTTTTACTCCCTCCG 57.588 47.619 0.00 0.00 0.00 4.63
910 927 5.566826 GCAATTGTTTCCTTTTACTCCCTCC 60.567 44.000 7.40 0.00 0.00 4.30
911 928 5.243954 AGCAATTGTTTCCTTTTACTCCCTC 59.756 40.000 7.40 0.00 0.00 4.30
912 929 5.147767 AGCAATTGTTTCCTTTTACTCCCT 58.852 37.500 7.40 0.00 0.00 4.20
913 930 5.468540 AGCAATTGTTTCCTTTTACTCCC 57.531 39.130 7.40 0.00 0.00 4.30
914 931 8.141909 AGTTAAGCAATTGTTTCCTTTTACTCC 58.858 33.333 11.08 0.00 0.00 3.85
915 932 9.529325 AAGTTAAGCAATTGTTTCCTTTTACTC 57.471 29.630 11.08 0.00 0.00 2.59
916 933 9.884636 AAAGTTAAGCAATTGTTTCCTTTTACT 57.115 25.926 18.57 12.14 0.00 2.24
981 998 0.249699 TTGTGGTGACGATTCGCAGT 60.250 50.000 5.86 0.00 33.51 4.40
990 1007 1.588404 GCGAGTATCATTGTGGTGACG 59.412 52.381 0.00 0.00 33.17 4.35
1668 1780 3.127030 GCTTGTTTCCCACATAGTAGCAC 59.873 47.826 0.00 0.00 36.09 4.40
1970 2210 3.247948 TGGCCATGCATAAGAATCCAT 57.752 42.857 0.00 0.00 0.00 3.41
1972 2212 4.405116 TTTTGGCCATGCATAAGAATCC 57.595 40.909 6.09 0.00 0.00 3.01
1974 2214 4.225717 ACCTTTTTGGCCATGCATAAGAAT 59.774 37.500 6.09 0.00 40.22 2.40
1980 2220 0.321830 GCACCTTTTTGGCCATGCAT 60.322 50.000 19.43 0.00 40.22 3.96
1989 2229 3.321682 TCCTCCAATGAAGCACCTTTTTG 59.678 43.478 0.00 0.00 0.00 2.44
2094 2334 2.461110 GCCGAGGCCATGTTGTACG 61.461 63.158 5.01 0.00 34.56 3.67
2112 2352 3.311871 GCTCAACATGCTTGTCTGATAGG 59.688 47.826 5.61 3.14 34.06 2.57
2161 2401 6.587990 CAGACTAATGACGTTGACTGATTTCT 59.412 38.462 0.00 0.00 0.00 2.52
2166 2406 3.572682 ACCAGACTAATGACGTTGACTGA 59.427 43.478 0.00 0.00 0.00 3.41
2172 2412 6.538742 CCAATTCATACCAGACTAATGACGTT 59.461 38.462 0.00 0.00 29.64 3.99
2175 2415 5.822519 TGCCAATTCATACCAGACTAATGAC 59.177 40.000 0.00 0.00 29.64 3.06
2180 2420 6.493189 TGTATGCCAATTCATACCAGACTA 57.507 37.500 12.38 0.00 44.97 2.59
2184 2424 4.996758 TCGATGTATGCCAATTCATACCAG 59.003 41.667 12.38 6.29 44.97 4.00
2193 2433 4.516698 CCTTTAGCTTCGATGTATGCCAAT 59.483 41.667 0.00 0.00 0.00 3.16
2217 2457 0.881118 TGTTGCCTTTCTTCATCCGC 59.119 50.000 0.00 0.00 0.00 5.54
2342 2582 3.432326 GGAGACATCCACTGGGTAATGAC 60.432 52.174 2.89 0.00 45.87 3.06
2462 2784 9.058174 GCTCTTCTAGATGTTGATGTAGTAGTA 57.942 37.037 5.60 0.00 29.72 1.82
2463 2785 7.558081 TGCTCTTCTAGATGTTGATGTAGTAGT 59.442 37.037 5.60 0.00 29.72 2.73
2464 2786 7.935520 TGCTCTTCTAGATGTTGATGTAGTAG 58.064 38.462 5.60 0.00 29.10 2.57
2465 2787 7.881775 TGCTCTTCTAGATGTTGATGTAGTA 57.118 36.000 5.60 0.00 29.36 1.82
2466 2788 6.782082 TGCTCTTCTAGATGTTGATGTAGT 57.218 37.500 5.60 0.00 29.36 2.73
2467 2789 8.659925 ATTTGCTCTTCTAGATGTTGATGTAG 57.340 34.615 5.60 0.00 0.00 2.74
2468 2790 9.755804 CTATTTGCTCTTCTAGATGTTGATGTA 57.244 33.333 5.60 0.00 0.00 2.29
2469 2791 8.263640 ACTATTTGCTCTTCTAGATGTTGATGT 58.736 33.333 5.60 0.00 0.00 3.06
2618 2940 3.535561 AGCCGATACAATGACTTTGAGG 58.464 45.455 7.99 6.66 38.76 3.86
2694 3019 7.757624 ACACTTTCTTAAATTGCACTTTTTCGA 59.242 29.630 7.39 0.14 0.00 3.71
2822 3149 2.353323 CAGTCTACACAGCATGCATGT 58.647 47.619 26.79 25.28 42.53 3.21
2864 3194 1.172180 CCTTCGGCCTTTGCACAGAA 61.172 55.000 0.17 0.00 40.13 3.02
2957 3288 0.534203 GGACGAAGACTTTGGCACCA 60.534 55.000 10.58 0.00 0.00 4.17
3027 3364 6.827586 ATTAAAATTTACTCGGTCAAGGCA 57.172 33.333 0.00 0.00 0.00 4.75
3092 3429 2.541120 GGCGCCTCATGATCTGCAC 61.541 63.158 22.15 4.19 0.00 4.57
3127 3471 1.074775 AGGGCAGCGATTTGGTTCA 59.925 52.632 0.00 0.00 0.00 3.18
3157 3501 7.173218 CAGAGTTTCTACAAGCCTTTATTGACA 59.827 37.037 0.00 0.00 0.00 3.58
3159 3503 7.450074 TCAGAGTTTCTACAAGCCTTTATTGA 58.550 34.615 0.00 0.00 0.00 2.57
3175 3519 3.308323 GCGATGATGGTCTTCAGAGTTTC 59.692 47.826 0.00 0.00 0.00 2.78
3206 3550 6.536224 CAGCTTTCATGGTTTTCAGAGTTTTT 59.464 34.615 0.00 0.00 0.00 1.94
3207 3551 6.044682 CAGCTTTCATGGTTTTCAGAGTTTT 58.955 36.000 0.00 0.00 0.00 2.43
3208 3552 5.452356 CCAGCTTTCATGGTTTTCAGAGTTT 60.452 40.000 0.00 0.00 32.85 2.66
3209 3553 4.038402 CCAGCTTTCATGGTTTTCAGAGTT 59.962 41.667 0.00 0.00 32.85 3.01
3210 3554 3.571401 CCAGCTTTCATGGTTTTCAGAGT 59.429 43.478 0.00 0.00 32.85 3.24
3211 3555 3.613432 GCCAGCTTTCATGGTTTTCAGAG 60.613 47.826 0.00 0.00 40.17 3.35
3212 3556 2.297033 GCCAGCTTTCATGGTTTTCAGA 59.703 45.455 0.00 0.00 40.17 3.27
3213 3557 2.298163 AGCCAGCTTTCATGGTTTTCAG 59.702 45.455 0.00 0.00 40.17 3.02
3214 3558 2.036217 CAGCCAGCTTTCATGGTTTTCA 59.964 45.455 0.00 0.00 40.17 2.69
3215 3559 2.297033 TCAGCCAGCTTTCATGGTTTTC 59.703 45.455 0.00 0.00 40.17 2.29
3216 3560 2.318908 TCAGCCAGCTTTCATGGTTTT 58.681 42.857 0.00 0.00 40.17 2.43
3217 3561 1.999648 TCAGCCAGCTTTCATGGTTT 58.000 45.000 0.00 0.00 40.17 3.27
3218 3562 1.999648 TTCAGCCAGCTTTCATGGTT 58.000 45.000 0.00 0.00 40.17 3.67
3219 3563 2.097825 GATTCAGCCAGCTTTCATGGT 58.902 47.619 0.00 0.00 40.17 3.55
3220 3564 2.376109 AGATTCAGCCAGCTTTCATGG 58.624 47.619 0.00 0.00 41.04 3.66
3221 3565 3.564644 CCTAGATTCAGCCAGCTTTCATG 59.435 47.826 0.00 0.00 0.00 3.07
3222 3566 3.201708 ACCTAGATTCAGCCAGCTTTCAT 59.798 43.478 0.00 0.00 0.00 2.57
3223 3567 2.573462 ACCTAGATTCAGCCAGCTTTCA 59.427 45.455 0.00 0.00 0.00 2.69
3224 3568 3.274095 ACCTAGATTCAGCCAGCTTTC 57.726 47.619 0.00 0.00 0.00 2.62
3225 3569 4.033709 TCTACCTAGATTCAGCCAGCTTT 58.966 43.478 0.00 0.00 0.00 3.51
3226 3570 3.647636 TCTACCTAGATTCAGCCAGCTT 58.352 45.455 0.00 0.00 0.00 3.74
3227 3571 3.320610 TCTACCTAGATTCAGCCAGCT 57.679 47.619 0.00 0.00 0.00 4.24
3228 3572 3.056179 GGATCTACCTAGATTCAGCCAGC 60.056 52.174 0.00 0.00 42.79 4.85
3229 3573 4.021544 GTGGATCTACCTAGATTCAGCCAG 60.022 50.000 3.82 0.00 46.22 4.85
3230 3574 3.898123 GTGGATCTACCTAGATTCAGCCA 59.102 47.826 3.82 1.11 46.22 4.75
3231 3575 4.529109 GTGGATCTACCTAGATTCAGCC 57.471 50.000 3.82 0.00 46.22 4.85
3233 3577 5.389520 TCTGGTGGATCTACCTAGATTCAG 58.610 45.833 26.57 14.83 46.22 3.02
3234 3578 5.403558 TCTGGTGGATCTACCTAGATTCA 57.596 43.478 26.57 5.97 44.10 2.57
3235 3579 6.098409 TGTTTCTGGTGGATCTACCTAGATTC 59.902 42.308 26.57 19.74 42.79 2.52
3236 3580 5.964477 TGTTTCTGGTGGATCTACCTAGATT 59.036 40.000 26.57 0.00 42.79 2.40
3237 3581 5.529289 TGTTTCTGGTGGATCTACCTAGAT 58.471 41.667 26.57 0.00 45.26 1.98
3238 3582 4.942944 TGTTTCTGGTGGATCTACCTAGA 58.057 43.478 26.57 22.46 41.43 2.43
3239 3583 5.878406 ATGTTTCTGGTGGATCTACCTAG 57.122 43.478 26.57 20.86 41.43 3.02
3240 3584 7.365295 GGTTTATGTTTCTGGTGGATCTACCTA 60.365 40.741 26.57 13.66 41.43 3.08
3241 3585 6.415573 GTTTATGTTTCTGGTGGATCTACCT 58.584 40.000 26.57 9.17 41.43 3.08
3242 3586 5.589050 GGTTTATGTTTCTGGTGGATCTACC 59.411 44.000 20.81 20.81 41.24 3.18
3243 3587 5.293569 CGGTTTATGTTTCTGGTGGATCTAC 59.706 44.000 0.00 0.00 0.00 2.59
3244 3588 5.188163 TCGGTTTATGTTTCTGGTGGATCTA 59.812 40.000 0.00 0.00 0.00 1.98
3248 3592 3.071892 AGTCGGTTTATGTTTCTGGTGGA 59.928 43.478 0.00 0.00 0.00 4.02
3252 3596 5.350640 GGTCTTAGTCGGTTTATGTTTCTGG 59.649 44.000 0.00 0.00 0.00 3.86
3260 3604 5.687166 TTGATGGGTCTTAGTCGGTTTAT 57.313 39.130 0.00 0.00 0.00 1.40
3312 3665 2.366533 TCCGTTTTGTTGGTGTGCTTA 58.633 42.857 0.00 0.00 0.00 3.09
3321 3674 5.066764 TCCCTACTCTTTTTCCGTTTTGTTG 59.933 40.000 0.00 0.00 0.00 3.33
3326 3679 4.968971 TCTCCCTACTCTTTTTCCGTTT 57.031 40.909 0.00 0.00 0.00 3.60
3330 3683 8.809468 AATAATGTTCTCCCTACTCTTTTTCC 57.191 34.615 0.00 0.00 0.00 3.13
3332 3685 8.615705 AGGAATAATGTTCTCCCTACTCTTTTT 58.384 33.333 0.00 0.00 0.00 1.94
3338 3691 7.070074 CAGTGTAGGAATAATGTTCTCCCTACT 59.930 40.741 14.91 0.00 43.82 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.