Multiple sequence alignment - TraesCS2A01G505400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G505400 chr2A 100.000 2210 0 0 1 2210 733720453 733722662 0.000000e+00 4082.0
1 TraesCS2A01G505400 chr2D 90.613 522 28 12 859 1367 600066123 600066636 0.000000e+00 673.0
2 TraesCS2A01G505400 chr2D 87.979 574 44 11 1642 2201 600068712 600069274 0.000000e+00 654.0
3 TraesCS2A01G505400 chr2D 87.164 335 34 7 878 1211 599939719 599940045 2.680000e-99 372.0
4 TraesCS2A01G505400 chr2D 83.010 206 15 8 1359 1549 600067695 600067895 3.770000e-38 169.0
5 TraesCS2A01G505400 chr2D 93.137 102 4 1 540 641 600065611 600065709 1.770000e-31 147.0
6 TraesCS2A01G505400 chr2D 96.226 53 1 1 491 542 599939300 599939352 3.910000e-13 86.1
7 TraesCS2A01G505400 chr2B 83.369 469 56 9 754 1211 729877733 729878190 4.390000e-112 414.0
8 TraesCS2A01G505400 chr2B 88.722 133 8 4 1 127 729961543 729961674 2.940000e-34 156.0
9 TraesCS2A01G505400 chr3D 83.784 74 5 4 1548 1616 455851912 455851983 1.830000e-06 63.9
10 TraesCS2A01G505400 chr3D 92.683 41 2 1 1464 1503 27682224 27682264 8.520000e-05 58.4
11 TraesCS2A01G505400 chr1A 82.857 70 6 4 1555 1620 580447911 580447844 8.520000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G505400 chr2A 733720453 733722662 2209 False 4082.00 4082 100.00000 1 2210 1 chr2A.!!$F1 2209
1 TraesCS2A01G505400 chr2D 600065611 600069274 3663 False 410.75 673 88.68475 540 2201 4 chr2D.!!$F2 1661
2 TraesCS2A01G505400 chr2D 599939300 599940045 745 False 229.05 372 91.69500 491 1211 2 chr2D.!!$F1 720

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
455 456 0.036306 GGAAAAACAGCCTCTCCGGA 59.964 55.0 2.93 2.93 33.16 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1411 2852 0.534203 ATATACTTGTTGCCCCCGCG 60.534 55.0 0.0 0.0 38.08 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.341846 AGTTTGCAAGGGAAACGAGA 57.658 45.000 0.00 0.00 38.18 4.04
21 22 2.650322 AGTTTGCAAGGGAAACGAGAA 58.350 42.857 0.00 0.00 38.18 2.87
22 23 3.020984 AGTTTGCAAGGGAAACGAGAAA 58.979 40.909 0.00 0.00 38.18 2.52
23 24 3.636764 AGTTTGCAAGGGAAACGAGAAAT 59.363 39.130 0.00 0.00 38.18 2.17
24 25 4.825085 AGTTTGCAAGGGAAACGAGAAATA 59.175 37.500 0.00 0.00 38.18 1.40
25 26 5.048713 AGTTTGCAAGGGAAACGAGAAATAG 60.049 40.000 0.00 0.00 38.18 1.73
26 27 2.747446 TGCAAGGGAAACGAGAAATAGC 59.253 45.455 0.00 0.00 0.00 2.97
27 28 2.747446 GCAAGGGAAACGAGAAATAGCA 59.253 45.455 0.00 0.00 0.00 3.49
28 29 3.190535 GCAAGGGAAACGAGAAATAGCAA 59.809 43.478 0.00 0.00 0.00 3.91
29 30 4.320935 GCAAGGGAAACGAGAAATAGCAAA 60.321 41.667 0.00 0.00 0.00 3.68
30 31 5.622233 GCAAGGGAAACGAGAAATAGCAAAT 60.622 40.000 0.00 0.00 0.00 2.32
31 32 5.567138 AGGGAAACGAGAAATAGCAAATG 57.433 39.130 0.00 0.00 0.00 2.32
32 33 5.253330 AGGGAAACGAGAAATAGCAAATGA 58.747 37.500 0.00 0.00 0.00 2.57
33 34 5.710099 AGGGAAACGAGAAATAGCAAATGAA 59.290 36.000 0.00 0.00 0.00 2.57
34 35 6.378280 AGGGAAACGAGAAATAGCAAATGAAT 59.622 34.615 0.00 0.00 0.00 2.57
35 36 7.035612 GGGAAACGAGAAATAGCAAATGAATT 58.964 34.615 0.00 0.00 0.00 2.17
36 37 7.545615 GGGAAACGAGAAATAGCAAATGAATTT 59.454 33.333 0.00 0.00 0.00 1.82
37 38 8.925700 GGAAACGAGAAATAGCAAATGAATTTT 58.074 29.630 0.00 0.00 0.00 1.82
62 63 9.985318 TTATTTTGTGAGAAAATGCAAAGTTTG 57.015 25.926 11.41 11.41 33.25 2.93
73 74 2.336554 CAAAGTTTGCATCTCGGTGG 57.663 50.000 1.96 0.00 0.00 4.61
74 75 1.879380 CAAAGTTTGCATCTCGGTGGA 59.121 47.619 1.96 0.00 0.00 4.02
75 76 2.489329 CAAAGTTTGCATCTCGGTGGAT 59.511 45.455 1.96 0.00 0.00 3.41
76 77 2.496899 AGTTTGCATCTCGGTGGATT 57.503 45.000 0.00 0.00 0.00 3.01
77 78 2.086869 AGTTTGCATCTCGGTGGATTG 58.913 47.619 0.00 0.00 0.00 2.67
78 79 2.083774 GTTTGCATCTCGGTGGATTGA 58.916 47.619 0.00 0.00 0.00 2.57
79 80 1.737838 TTGCATCTCGGTGGATTGAC 58.262 50.000 0.00 0.00 0.00 3.18
80 81 0.612744 TGCATCTCGGTGGATTGACA 59.387 50.000 0.00 0.00 0.00 3.58
81 82 1.293924 GCATCTCGGTGGATTGACAG 58.706 55.000 0.00 0.00 0.00 3.51
82 83 1.945387 CATCTCGGTGGATTGACAGG 58.055 55.000 0.00 0.00 0.00 4.00
83 84 1.482182 CATCTCGGTGGATTGACAGGA 59.518 52.381 0.00 0.00 0.00 3.86
84 85 1.639722 TCTCGGTGGATTGACAGGAA 58.360 50.000 0.00 0.00 0.00 3.36
85 86 1.550524 TCTCGGTGGATTGACAGGAAG 59.449 52.381 0.00 0.00 0.00 3.46
86 87 1.550524 CTCGGTGGATTGACAGGAAGA 59.449 52.381 0.00 0.00 0.00 2.87
87 88 1.974957 TCGGTGGATTGACAGGAAGAA 59.025 47.619 0.00 0.00 0.00 2.52
88 89 2.370519 TCGGTGGATTGACAGGAAGAAA 59.629 45.455 0.00 0.00 0.00 2.52
89 90 2.744202 CGGTGGATTGACAGGAAGAAAG 59.256 50.000 0.00 0.00 0.00 2.62
90 91 3.557054 CGGTGGATTGACAGGAAGAAAGA 60.557 47.826 0.00 0.00 0.00 2.52
91 92 4.593956 GGTGGATTGACAGGAAGAAAGAT 58.406 43.478 0.00 0.00 0.00 2.40
92 93 4.397417 GGTGGATTGACAGGAAGAAAGATG 59.603 45.833 0.00 0.00 0.00 2.90
93 94 5.006386 GTGGATTGACAGGAAGAAAGATGT 58.994 41.667 0.00 0.00 0.00 3.06
94 95 6.173339 GTGGATTGACAGGAAGAAAGATGTA 58.827 40.000 0.00 0.00 0.00 2.29
95 96 6.092807 GTGGATTGACAGGAAGAAAGATGTAC 59.907 42.308 0.00 0.00 0.00 2.90
96 97 6.173339 GGATTGACAGGAAGAAAGATGTACA 58.827 40.000 0.00 0.00 0.00 2.90
97 98 6.655003 GGATTGACAGGAAGAAAGATGTACAA 59.345 38.462 0.00 0.00 0.00 2.41
98 99 6.861065 TTGACAGGAAGAAAGATGTACAAC 57.139 37.500 0.00 0.00 0.00 3.32
99 100 6.174720 TGACAGGAAGAAAGATGTACAACT 57.825 37.500 0.00 0.00 0.00 3.16
100 101 5.991606 TGACAGGAAGAAAGATGTACAACTG 59.008 40.000 6.39 3.99 0.00 3.16
101 102 5.930135 ACAGGAAGAAAGATGTACAACTGT 58.070 37.500 6.39 0.17 0.00 3.55
102 103 7.062749 ACAGGAAGAAAGATGTACAACTGTA 57.937 36.000 6.39 0.00 34.11 2.74
114 115 5.064441 GTACAACTGTACGACCCAATACT 57.936 43.478 4.34 0.00 41.06 2.12
115 116 6.194796 GTACAACTGTACGACCCAATACTA 57.805 41.667 4.34 0.00 41.06 1.82
116 117 5.320549 ACAACTGTACGACCCAATACTAG 57.679 43.478 0.00 0.00 0.00 2.57
117 118 4.159135 ACAACTGTACGACCCAATACTAGG 59.841 45.833 0.00 0.00 0.00 3.02
118 119 2.692041 ACTGTACGACCCAATACTAGGC 59.308 50.000 0.00 0.00 0.00 3.93
119 120 2.034124 TGTACGACCCAATACTAGGCC 58.966 52.381 0.00 0.00 0.00 5.19
120 121 1.000938 GTACGACCCAATACTAGGCCG 60.001 57.143 0.00 0.00 0.00 6.13
121 122 0.396139 ACGACCCAATACTAGGCCGA 60.396 55.000 0.00 0.00 0.00 5.54
122 123 0.748450 CGACCCAATACTAGGCCGAA 59.252 55.000 0.00 0.00 0.00 4.30
123 124 1.537562 CGACCCAATACTAGGCCGAAC 60.538 57.143 0.00 0.00 0.00 3.95
124 125 1.483415 GACCCAATACTAGGCCGAACA 59.517 52.381 0.00 0.00 0.00 3.18
125 126 1.485066 ACCCAATACTAGGCCGAACAG 59.515 52.381 0.00 0.00 0.00 3.16
126 127 1.760613 CCCAATACTAGGCCGAACAGA 59.239 52.381 0.00 0.00 0.00 3.41
127 128 2.483188 CCCAATACTAGGCCGAACAGAC 60.483 54.545 0.00 0.00 0.00 3.51
128 129 2.460918 CAATACTAGGCCGAACAGACG 58.539 52.381 0.00 0.00 0.00 4.18
137 138 3.403276 CGAACAGACGGGACTCTTC 57.597 57.895 0.00 0.00 0.00 2.87
138 139 0.596577 CGAACAGACGGGACTCTTCA 59.403 55.000 0.00 0.00 0.00 3.02
139 140 1.401670 CGAACAGACGGGACTCTTCAG 60.402 57.143 0.00 0.00 0.00 3.02
140 141 1.887198 GAACAGACGGGACTCTTCAGA 59.113 52.381 0.00 0.00 0.00 3.27
141 142 1.249407 ACAGACGGGACTCTTCAGAC 58.751 55.000 0.00 0.00 0.00 3.51
142 143 1.248486 CAGACGGGACTCTTCAGACA 58.752 55.000 0.00 0.00 0.00 3.41
143 144 1.201181 CAGACGGGACTCTTCAGACAG 59.799 57.143 0.00 0.00 0.00 3.51
144 145 0.528470 GACGGGACTCTTCAGACAGG 59.472 60.000 0.00 0.00 0.00 4.00
145 146 0.112606 ACGGGACTCTTCAGACAGGA 59.887 55.000 0.00 0.00 0.00 3.86
146 147 1.272760 ACGGGACTCTTCAGACAGGAT 60.273 52.381 0.00 0.00 0.00 3.24
147 148 1.827969 CGGGACTCTTCAGACAGGATT 59.172 52.381 0.00 0.00 0.00 3.01
148 149 3.024547 CGGGACTCTTCAGACAGGATTA 58.975 50.000 0.00 0.00 0.00 1.75
149 150 3.639094 CGGGACTCTTCAGACAGGATTAT 59.361 47.826 0.00 0.00 0.00 1.28
150 151 4.500545 CGGGACTCTTCAGACAGGATTATG 60.501 50.000 0.00 0.00 0.00 1.90
151 152 4.651503 GGGACTCTTCAGACAGGATTATGA 59.348 45.833 0.00 0.00 0.00 2.15
152 153 5.452636 GGGACTCTTCAGACAGGATTATGAC 60.453 48.000 0.00 0.00 0.00 3.06
153 154 5.452636 GGACTCTTCAGACAGGATTATGACC 60.453 48.000 0.00 0.00 0.00 4.02
154 155 5.026121 ACTCTTCAGACAGGATTATGACCA 58.974 41.667 0.00 0.00 0.00 4.02
155 156 5.485353 ACTCTTCAGACAGGATTATGACCAA 59.515 40.000 0.00 0.00 0.00 3.67
156 157 5.734720 TCTTCAGACAGGATTATGACCAAC 58.265 41.667 0.00 0.00 0.00 3.77
157 158 5.248248 TCTTCAGACAGGATTATGACCAACA 59.752 40.000 0.00 0.00 0.00 3.33
158 159 5.497464 TCAGACAGGATTATGACCAACAA 57.503 39.130 0.00 0.00 0.00 2.83
159 160 5.245531 TCAGACAGGATTATGACCAACAAC 58.754 41.667 0.00 0.00 0.00 3.32
160 161 4.396166 CAGACAGGATTATGACCAACAACC 59.604 45.833 0.00 0.00 0.00 3.77
161 162 3.343617 ACAGGATTATGACCAACAACCG 58.656 45.455 0.00 0.00 0.00 4.44
162 163 2.097466 CAGGATTATGACCAACAACCGC 59.903 50.000 0.00 0.00 0.00 5.68
163 164 1.404035 GGATTATGACCAACAACCGCC 59.596 52.381 0.00 0.00 0.00 6.13
164 165 1.404035 GATTATGACCAACAACCGCCC 59.596 52.381 0.00 0.00 0.00 6.13
165 166 0.110678 TTATGACCAACAACCGCCCA 59.889 50.000 0.00 0.00 0.00 5.36
166 167 0.110678 TATGACCAACAACCGCCCAA 59.889 50.000 0.00 0.00 0.00 4.12
167 168 1.460273 ATGACCAACAACCGCCCAAC 61.460 55.000 0.00 0.00 0.00 3.77
168 169 2.043852 ACCAACAACCGCCCAACA 60.044 55.556 0.00 0.00 0.00 3.33
169 170 1.456705 ACCAACAACCGCCCAACAT 60.457 52.632 0.00 0.00 0.00 2.71
170 171 1.045911 ACCAACAACCGCCCAACATT 61.046 50.000 0.00 0.00 0.00 2.71
171 172 0.599728 CCAACAACCGCCCAACATTG 60.600 55.000 0.00 0.00 0.00 2.82
188 189 7.064060 CAACATTGGAAAAATTATGACCAGC 57.936 36.000 0.00 0.00 32.16 4.85
189 190 6.357579 ACATTGGAAAAATTATGACCAGCA 57.642 33.333 0.00 0.00 32.16 4.41
190 191 6.949715 ACATTGGAAAAATTATGACCAGCAT 58.050 32.000 0.00 0.00 41.08 3.79
191 192 8.076910 ACATTGGAAAAATTATGACCAGCATA 57.923 30.769 0.00 0.00 38.44 3.14
192 193 8.199449 ACATTGGAAAAATTATGACCAGCATAG 58.801 33.333 0.00 0.00 40.40 2.23
193 194 6.713762 TGGAAAAATTATGACCAGCATAGG 57.286 37.500 0.00 0.00 40.40 2.57
194 195 6.430864 TGGAAAAATTATGACCAGCATAGGA 58.569 36.000 0.00 0.00 40.40 2.94
195 196 6.894654 TGGAAAAATTATGACCAGCATAGGAA 59.105 34.615 0.00 0.00 40.40 3.36
196 197 7.398618 TGGAAAAATTATGACCAGCATAGGAAA 59.601 33.333 0.00 0.00 40.40 3.13
197 198 8.257306 GGAAAAATTATGACCAGCATAGGAAAA 58.743 33.333 0.00 0.00 40.40 2.29
198 199 9.822185 GAAAAATTATGACCAGCATAGGAAAAT 57.178 29.630 0.00 0.00 40.40 1.82
199 200 9.822185 AAAAATTATGACCAGCATAGGAAAATC 57.178 29.630 0.00 0.00 40.40 2.17
200 201 8.773033 AAATTATGACCAGCATAGGAAAATCT 57.227 30.769 0.00 0.00 40.40 2.40
201 202 7.992754 ATTATGACCAGCATAGGAAAATCTC 57.007 36.000 0.00 0.00 40.40 2.75
202 203 3.797039 TGACCAGCATAGGAAAATCTCG 58.203 45.455 0.00 0.00 0.00 4.04
203 204 3.134458 GACCAGCATAGGAAAATCTCGG 58.866 50.000 0.00 0.00 0.00 4.63
204 205 1.876156 CCAGCATAGGAAAATCTCGGC 59.124 52.381 0.00 0.00 0.00 5.54
205 206 1.528586 CAGCATAGGAAAATCTCGGCG 59.471 52.381 0.00 0.00 0.00 6.46
206 207 1.139058 AGCATAGGAAAATCTCGGCGT 59.861 47.619 6.85 0.00 0.00 5.68
207 208 2.364324 AGCATAGGAAAATCTCGGCGTA 59.636 45.455 6.85 0.00 0.00 4.42
208 209 2.731976 GCATAGGAAAATCTCGGCGTAG 59.268 50.000 6.85 3.20 0.00 3.51
209 210 3.552273 GCATAGGAAAATCTCGGCGTAGA 60.552 47.826 6.85 9.16 0.00 2.59
210 211 4.617959 CATAGGAAAATCTCGGCGTAGAA 58.382 43.478 6.85 0.00 0.00 2.10
211 212 3.604875 AGGAAAATCTCGGCGTAGAAA 57.395 42.857 6.85 0.00 0.00 2.52
212 213 3.522553 AGGAAAATCTCGGCGTAGAAAG 58.477 45.455 6.85 0.00 0.00 2.62
213 214 3.194968 AGGAAAATCTCGGCGTAGAAAGA 59.805 43.478 6.85 1.55 0.00 2.52
214 215 3.930848 GGAAAATCTCGGCGTAGAAAGAA 59.069 43.478 6.85 0.00 0.00 2.52
215 216 4.390909 GGAAAATCTCGGCGTAGAAAGAAA 59.609 41.667 6.85 0.00 0.00 2.52
216 217 5.106830 GGAAAATCTCGGCGTAGAAAGAAAA 60.107 40.000 6.85 0.00 0.00 2.29
217 218 4.923264 AATCTCGGCGTAGAAAGAAAAC 57.077 40.909 6.85 0.00 0.00 2.43
218 219 2.680577 TCTCGGCGTAGAAAGAAAACC 58.319 47.619 6.85 0.00 0.00 3.27
219 220 2.298163 TCTCGGCGTAGAAAGAAAACCT 59.702 45.455 6.85 0.00 0.00 3.50
220 221 3.064931 CTCGGCGTAGAAAGAAAACCTT 58.935 45.455 6.85 0.00 36.47 3.50
221 222 2.803956 TCGGCGTAGAAAGAAAACCTTG 59.196 45.455 6.85 0.00 34.79 3.61
222 223 2.803956 CGGCGTAGAAAGAAAACCTTGA 59.196 45.455 0.00 0.00 34.79 3.02
223 224 3.120649 CGGCGTAGAAAGAAAACCTTGAG 60.121 47.826 0.00 0.00 34.79 3.02
224 225 3.365064 GGCGTAGAAAGAAAACCTTGAGC 60.365 47.826 0.00 0.00 34.79 4.26
225 226 3.250040 GCGTAGAAAGAAAACCTTGAGCA 59.750 43.478 0.00 0.00 34.79 4.26
226 227 4.773510 CGTAGAAAGAAAACCTTGAGCAC 58.226 43.478 0.00 0.00 34.79 4.40
227 228 4.272504 CGTAGAAAGAAAACCTTGAGCACA 59.727 41.667 0.00 0.00 34.79 4.57
228 229 4.907879 AGAAAGAAAACCTTGAGCACAG 57.092 40.909 0.00 0.00 34.79 3.66
229 230 3.067320 AGAAAGAAAACCTTGAGCACAGC 59.933 43.478 0.00 0.00 34.79 4.40
230 231 1.322442 AGAAAACCTTGAGCACAGCC 58.678 50.000 0.00 0.00 0.00 4.85
231 232 1.032014 GAAAACCTTGAGCACAGCCA 58.968 50.000 0.00 0.00 0.00 4.75
232 233 1.408702 GAAAACCTTGAGCACAGCCAA 59.591 47.619 0.00 0.00 0.00 4.52
233 234 1.708341 AAACCTTGAGCACAGCCAAT 58.292 45.000 0.00 0.00 0.00 3.16
234 235 0.963962 AACCTTGAGCACAGCCAATG 59.036 50.000 0.00 0.00 0.00 2.82
235 236 0.111061 ACCTTGAGCACAGCCAATGA 59.889 50.000 0.00 0.00 0.00 2.57
236 237 1.250328 CCTTGAGCACAGCCAATGAA 58.750 50.000 0.00 0.00 0.00 2.57
237 238 1.614903 CCTTGAGCACAGCCAATGAAA 59.385 47.619 0.00 0.00 0.00 2.69
238 239 2.036217 CCTTGAGCACAGCCAATGAAAA 59.964 45.455 0.00 0.00 0.00 2.29
239 240 3.493002 CCTTGAGCACAGCCAATGAAAAA 60.493 43.478 0.00 0.00 0.00 1.94
260 261 7.617041 AAAAACGAAAGATCTCCATAAGAGG 57.383 36.000 0.00 0.00 43.44 3.69
261 262 5.941555 AACGAAAGATCTCCATAAGAGGT 57.058 39.130 0.00 0.00 43.44 3.85
262 263 5.941555 ACGAAAGATCTCCATAAGAGGTT 57.058 39.130 0.00 0.00 43.44 3.50
263 264 6.301169 ACGAAAGATCTCCATAAGAGGTTT 57.699 37.500 0.00 0.00 43.44 3.27
264 265 6.109359 ACGAAAGATCTCCATAAGAGGTTTG 58.891 40.000 0.00 0.00 43.44 2.93
265 266 5.007136 CGAAAGATCTCCATAAGAGGTTTGC 59.993 44.000 0.00 0.00 43.44 3.68
266 267 4.065321 AGATCTCCATAAGAGGTTTGCG 57.935 45.455 0.00 0.00 43.44 4.85
267 268 3.452627 AGATCTCCATAAGAGGTTTGCGT 59.547 43.478 0.00 0.00 43.44 5.24
268 269 4.649674 AGATCTCCATAAGAGGTTTGCGTA 59.350 41.667 0.00 0.00 43.44 4.42
269 270 4.386867 TCTCCATAAGAGGTTTGCGTAG 57.613 45.455 0.00 0.00 43.44 3.51
270 271 4.021229 TCTCCATAAGAGGTTTGCGTAGA 58.979 43.478 0.00 0.00 43.44 2.59
271 272 4.649674 TCTCCATAAGAGGTTTGCGTAGAT 59.350 41.667 0.00 0.00 43.44 1.98
272 273 4.693283 TCCATAAGAGGTTTGCGTAGATG 58.307 43.478 0.00 0.00 0.00 2.90
273 274 4.161565 TCCATAAGAGGTTTGCGTAGATGT 59.838 41.667 0.00 0.00 0.00 3.06
274 275 4.876107 CCATAAGAGGTTTGCGTAGATGTT 59.124 41.667 0.00 0.00 0.00 2.71
275 276 6.046593 CCATAAGAGGTTTGCGTAGATGTTA 58.953 40.000 0.00 0.00 0.00 2.41
276 277 6.537301 CCATAAGAGGTTTGCGTAGATGTTAA 59.463 38.462 0.00 0.00 0.00 2.01
277 278 7.065324 CCATAAGAGGTTTGCGTAGATGTTAAA 59.935 37.037 0.00 0.00 0.00 1.52
278 279 6.870971 AAGAGGTTTGCGTAGATGTTAAAA 57.129 33.333 0.00 0.00 0.00 1.52
279 280 7.448748 AAGAGGTTTGCGTAGATGTTAAAAT 57.551 32.000 0.00 0.00 0.00 1.82
280 281 7.448748 AGAGGTTTGCGTAGATGTTAAAATT 57.551 32.000 0.00 0.00 0.00 1.82
281 282 7.527457 AGAGGTTTGCGTAGATGTTAAAATTC 58.473 34.615 0.00 0.00 0.00 2.17
282 283 6.617879 AGGTTTGCGTAGATGTTAAAATTCC 58.382 36.000 0.00 0.00 0.00 3.01
283 284 6.433093 AGGTTTGCGTAGATGTTAAAATTCCT 59.567 34.615 0.00 0.00 0.00 3.36
284 285 7.608761 AGGTTTGCGTAGATGTTAAAATTCCTA 59.391 33.333 0.00 0.00 0.00 2.94
285 286 8.403236 GGTTTGCGTAGATGTTAAAATTCCTAT 58.597 33.333 0.00 0.00 0.00 2.57
286 287 9.221775 GTTTGCGTAGATGTTAAAATTCCTATG 57.778 33.333 0.00 0.00 0.00 2.23
287 288 8.725405 TTGCGTAGATGTTAAAATTCCTATGA 57.275 30.769 0.00 0.00 0.00 2.15
288 289 8.725405 TGCGTAGATGTTAAAATTCCTATGAA 57.275 30.769 0.00 0.00 34.33 2.57
289 290 8.826710 TGCGTAGATGTTAAAATTCCTATGAAG 58.173 33.333 0.00 0.00 33.05 3.02
290 291 8.827677 GCGTAGATGTTAAAATTCCTATGAAGT 58.172 33.333 0.00 0.00 33.05 3.01
302 303 9.988815 AAATTCCTATGAAGTGTAGTAGCATAG 57.011 33.333 0.00 0.00 38.59 2.23
303 304 8.713708 ATTCCTATGAAGTGTAGTAGCATAGT 57.286 34.615 0.00 0.00 37.68 2.12
304 305 9.809395 ATTCCTATGAAGTGTAGTAGCATAGTA 57.191 33.333 0.00 0.00 37.68 1.82
305 306 9.636789 TTCCTATGAAGTGTAGTAGCATAGTAA 57.363 33.333 0.00 0.00 37.68 2.24
306 307 9.636789 TCCTATGAAGTGTAGTAGCATAGTAAA 57.363 33.333 0.00 0.00 37.68 2.01
333 334 7.872061 AAAAATCCTTAGGAAAAACTCCCAT 57.128 32.000 4.56 0.00 46.81 4.00
334 335 8.966155 AAAAATCCTTAGGAAAAACTCCCATA 57.034 30.769 4.56 0.00 46.81 2.74
335 336 8.966155 AAAATCCTTAGGAAAAACTCCCATAA 57.034 30.769 4.56 0.00 46.81 1.90
336 337 8.595362 AAATCCTTAGGAAAAACTCCCATAAG 57.405 34.615 4.56 0.00 46.81 1.73
337 338 6.963117 TCCTTAGGAAAAACTCCCATAAGA 57.037 37.500 0.00 0.00 46.81 2.10
338 339 7.525158 TCCTTAGGAAAAACTCCCATAAGAT 57.475 36.000 0.00 0.00 46.81 2.40
339 340 7.939781 TCCTTAGGAAAAACTCCCATAAGATT 58.060 34.615 0.00 0.00 46.81 2.40
340 341 7.834181 TCCTTAGGAAAAACTCCCATAAGATTG 59.166 37.037 0.00 0.00 46.81 2.67
341 342 7.834181 CCTTAGGAAAAACTCCCATAAGATTGA 59.166 37.037 0.00 0.00 46.81 2.57
342 343 9.243105 CTTAGGAAAAACTCCCATAAGATTGAA 57.757 33.333 0.00 0.00 46.81 2.69
343 344 9.768215 TTAGGAAAAACTCCCATAAGATTGAAT 57.232 29.630 0.00 0.00 46.81 2.57
344 345 8.298729 AGGAAAAACTCCCATAAGATTGAATC 57.701 34.615 0.00 0.00 46.81 2.52
345 346 7.343057 AGGAAAAACTCCCATAAGATTGAATCC 59.657 37.037 0.75 0.00 46.81 3.01
346 347 7.343057 GGAAAAACTCCCATAAGATTGAATCCT 59.657 37.037 0.75 0.00 38.44 3.24
347 348 9.408648 GAAAAACTCCCATAAGATTGAATCCTA 57.591 33.333 0.75 0.00 0.00 2.94
348 349 8.753497 AAAACTCCCATAAGATTGAATCCTAC 57.247 34.615 0.75 0.00 0.00 3.18
349 350 7.451731 AACTCCCATAAGATTGAATCCTACA 57.548 36.000 0.75 0.00 0.00 2.74
350 351 7.639062 ACTCCCATAAGATTGAATCCTACAT 57.361 36.000 0.75 0.00 0.00 2.29
351 352 7.456725 ACTCCCATAAGATTGAATCCTACATG 58.543 38.462 0.75 0.00 0.00 3.21
352 353 7.072961 ACTCCCATAAGATTGAATCCTACATGT 59.927 37.037 2.69 2.69 0.00 3.21
353 354 7.453393 TCCCATAAGATTGAATCCTACATGTC 58.547 38.462 0.00 0.00 0.00 3.06
354 355 7.072328 TCCCATAAGATTGAATCCTACATGTCA 59.928 37.037 0.00 0.00 0.00 3.58
355 356 7.720957 CCCATAAGATTGAATCCTACATGTCAA 59.279 37.037 0.00 0.00 34.68 3.18
356 357 9.123902 CCATAAGATTGAATCCTACATGTCAAA 57.876 33.333 0.00 0.00 33.93 2.69
359 360 7.035840 AGATTGAATCCTACATGTCAAATGC 57.964 36.000 0.00 0.00 33.93 3.56
360 361 5.581126 TTGAATCCTACATGTCAAATGCC 57.419 39.130 0.00 0.00 0.00 4.40
361 362 3.627123 TGAATCCTACATGTCAAATGCCG 59.373 43.478 0.00 0.00 0.00 5.69
362 363 3.558931 ATCCTACATGTCAAATGCCGA 57.441 42.857 0.00 0.00 0.00 5.54
363 364 3.342377 TCCTACATGTCAAATGCCGAA 57.658 42.857 0.00 0.00 0.00 4.30
364 365 3.006940 TCCTACATGTCAAATGCCGAAC 58.993 45.455 0.00 0.00 0.00 3.95
365 366 2.746904 CCTACATGTCAAATGCCGAACA 59.253 45.455 0.00 0.00 0.00 3.18
366 367 3.378112 CCTACATGTCAAATGCCGAACAT 59.622 43.478 0.00 0.00 42.30 2.71
367 368 4.574421 CCTACATGTCAAATGCCGAACATA 59.426 41.667 0.00 0.00 38.34 2.29
368 369 4.621068 ACATGTCAAATGCCGAACATAG 57.379 40.909 0.00 0.00 38.34 2.23
369 370 3.378112 ACATGTCAAATGCCGAACATAGG 59.622 43.478 0.00 0.00 38.34 2.57
370 371 3.342377 TGTCAAATGCCGAACATAGGA 57.658 42.857 0.00 0.00 38.34 2.94
371 372 3.680490 TGTCAAATGCCGAACATAGGAA 58.320 40.909 0.00 0.00 38.34 3.36
372 373 4.075682 TGTCAAATGCCGAACATAGGAAA 58.924 39.130 0.00 0.00 38.34 3.13
373 374 4.520874 TGTCAAATGCCGAACATAGGAAAA 59.479 37.500 0.00 0.00 38.34 2.29
374 375 5.010112 TGTCAAATGCCGAACATAGGAAAAA 59.990 36.000 0.00 0.00 38.34 1.94
375 376 6.099341 GTCAAATGCCGAACATAGGAAAAAT 58.901 36.000 0.00 0.00 38.34 1.82
376 377 6.253512 GTCAAATGCCGAACATAGGAAAAATC 59.746 38.462 0.00 0.00 38.34 2.17
377 378 6.152661 TCAAATGCCGAACATAGGAAAAATCT 59.847 34.615 0.00 0.00 38.34 2.40
378 379 6.530019 AATGCCGAACATAGGAAAAATCTT 57.470 33.333 0.00 0.00 38.34 2.40
379 380 7.639113 AATGCCGAACATAGGAAAAATCTTA 57.361 32.000 0.00 0.00 38.34 2.10
380 381 7.639113 ATGCCGAACATAGGAAAAATCTTAA 57.361 32.000 0.00 0.00 37.17 1.85
381 382 7.083875 TGCCGAACATAGGAAAAATCTTAAG 57.916 36.000 0.00 0.00 0.00 1.85
382 383 5.971792 GCCGAACATAGGAAAAATCTTAAGC 59.028 40.000 0.00 0.00 0.00 3.09
383 384 6.404293 GCCGAACATAGGAAAAATCTTAAGCA 60.404 38.462 0.00 0.00 0.00 3.91
384 385 7.682021 GCCGAACATAGGAAAAATCTTAAGCAT 60.682 37.037 0.00 0.00 0.00 3.79
385 386 7.857885 CCGAACATAGGAAAAATCTTAAGCATC 59.142 37.037 0.00 0.00 0.00 3.91
386 387 8.616076 CGAACATAGGAAAAATCTTAAGCATCT 58.384 33.333 0.00 0.00 0.00 2.90
387 388 9.943163 GAACATAGGAAAAATCTTAAGCATCTC 57.057 33.333 0.00 0.00 0.00 2.75
388 389 9.466497 AACATAGGAAAAATCTTAAGCATCTCA 57.534 29.630 0.00 0.00 0.00 3.27
389 390 9.466497 ACATAGGAAAAATCTTAAGCATCTCAA 57.534 29.630 0.00 0.00 0.00 3.02
392 393 8.005192 AGGAAAAATCTTAAGCATCTCAATCC 57.995 34.615 0.00 0.00 0.00 3.01
393 394 7.838193 AGGAAAAATCTTAAGCATCTCAATCCT 59.162 33.333 0.00 1.04 0.00 3.24
394 395 8.473219 GGAAAAATCTTAAGCATCTCAATCCTT 58.527 33.333 0.00 0.00 0.00 3.36
395 396 9.513727 GAAAAATCTTAAGCATCTCAATCCTTC 57.486 33.333 0.00 0.00 0.00 3.46
396 397 8.820153 AAAATCTTAAGCATCTCAATCCTTCT 57.180 30.769 0.00 0.00 0.00 2.85
397 398 9.911788 AAAATCTTAAGCATCTCAATCCTTCTA 57.088 29.630 0.00 0.00 0.00 2.10
398 399 9.911788 AAATCTTAAGCATCTCAATCCTTCTAA 57.088 29.630 0.00 0.00 0.00 2.10
399 400 9.911788 AATCTTAAGCATCTCAATCCTTCTAAA 57.088 29.630 0.00 0.00 0.00 1.85
400 401 8.723942 TCTTAAGCATCTCAATCCTTCTAAAC 57.276 34.615 0.00 0.00 0.00 2.01
401 402 8.321353 TCTTAAGCATCTCAATCCTTCTAAACA 58.679 33.333 0.00 0.00 0.00 2.83
402 403 6.749923 AAGCATCTCAATCCTTCTAAACAC 57.250 37.500 0.00 0.00 0.00 3.32
403 404 5.189180 AGCATCTCAATCCTTCTAAACACC 58.811 41.667 0.00 0.00 0.00 4.16
404 405 5.045286 AGCATCTCAATCCTTCTAAACACCT 60.045 40.000 0.00 0.00 0.00 4.00
405 406 6.156949 AGCATCTCAATCCTTCTAAACACCTA 59.843 38.462 0.00 0.00 0.00 3.08
406 407 6.995091 GCATCTCAATCCTTCTAAACACCTAT 59.005 38.462 0.00 0.00 0.00 2.57
407 408 7.041508 GCATCTCAATCCTTCTAAACACCTATG 60.042 40.741 0.00 0.00 0.00 2.23
408 409 7.733773 TCTCAATCCTTCTAAACACCTATGA 57.266 36.000 0.00 0.00 0.00 2.15
409 410 8.146053 TCTCAATCCTTCTAAACACCTATGAA 57.854 34.615 0.00 0.00 0.00 2.57
410 411 8.602424 TCTCAATCCTTCTAAACACCTATGAAA 58.398 33.333 0.00 0.00 0.00 2.69
411 412 9.231297 CTCAATCCTTCTAAACACCTATGAAAA 57.769 33.333 0.00 0.00 0.00 2.29
412 413 9.581289 TCAATCCTTCTAAACACCTATGAAAAA 57.419 29.630 0.00 0.00 0.00 1.94
433 434 7.679659 AAAAACGTTTGAATCAAGTAGAAGC 57.320 32.000 15.46 0.00 0.00 3.86
434 435 6.371809 AAACGTTTGAATCAAGTAGAAGCA 57.628 33.333 13.81 0.00 0.00 3.91
435 436 6.371809 AACGTTTGAATCAAGTAGAAGCAA 57.628 33.333 0.00 0.00 0.00 3.91
436 437 5.990408 ACGTTTGAATCAAGTAGAAGCAAG 58.010 37.500 0.00 0.00 0.00 4.01
437 438 5.049405 ACGTTTGAATCAAGTAGAAGCAAGG 60.049 40.000 0.00 0.00 0.00 3.61
438 439 5.179368 CGTTTGAATCAAGTAGAAGCAAGGA 59.821 40.000 0.00 0.00 0.00 3.36
439 440 6.293407 CGTTTGAATCAAGTAGAAGCAAGGAA 60.293 38.462 0.00 0.00 0.00 3.36
440 441 7.425606 GTTTGAATCAAGTAGAAGCAAGGAAA 58.574 34.615 0.00 0.00 0.00 3.13
441 442 7.581213 TTGAATCAAGTAGAAGCAAGGAAAA 57.419 32.000 0.00 0.00 0.00 2.29
442 443 7.581213 TGAATCAAGTAGAAGCAAGGAAAAA 57.419 32.000 0.00 0.00 0.00 1.94
443 444 7.425606 TGAATCAAGTAGAAGCAAGGAAAAAC 58.574 34.615 0.00 0.00 0.00 2.43
444 445 6.959639 ATCAAGTAGAAGCAAGGAAAAACA 57.040 33.333 0.00 0.00 0.00 2.83
445 446 6.377327 TCAAGTAGAAGCAAGGAAAAACAG 57.623 37.500 0.00 0.00 0.00 3.16
446 447 4.837896 AGTAGAAGCAAGGAAAAACAGC 57.162 40.909 0.00 0.00 0.00 4.40
447 448 3.570125 AGTAGAAGCAAGGAAAAACAGCC 59.430 43.478 0.00 0.00 0.00 4.85
448 449 2.670939 AGAAGCAAGGAAAAACAGCCT 58.329 42.857 0.00 0.00 35.61 4.58
449 450 2.625314 AGAAGCAAGGAAAAACAGCCTC 59.375 45.455 0.00 0.00 32.07 4.70
450 451 2.371658 AGCAAGGAAAAACAGCCTCT 57.628 45.000 0.00 0.00 32.07 3.69
451 452 2.234143 AGCAAGGAAAAACAGCCTCTC 58.766 47.619 0.00 0.00 32.07 3.20
452 453 1.270826 GCAAGGAAAAACAGCCTCTCC 59.729 52.381 0.00 0.00 32.07 3.71
453 454 1.537202 CAAGGAAAAACAGCCTCTCCG 59.463 52.381 0.00 0.00 32.07 4.63
454 455 0.036875 AGGAAAAACAGCCTCTCCGG 59.963 55.000 0.00 0.00 0.00 5.14
455 456 0.036306 GGAAAAACAGCCTCTCCGGA 59.964 55.000 2.93 2.93 33.16 5.14
456 457 1.157585 GAAAAACAGCCTCTCCGGAC 58.842 55.000 0.00 0.00 33.16 4.79
457 458 0.250770 AAAAACAGCCTCTCCGGACC 60.251 55.000 0.00 0.00 33.16 4.46
458 459 1.415672 AAAACAGCCTCTCCGGACCA 61.416 55.000 0.00 0.00 33.16 4.02
459 460 1.831652 AAACAGCCTCTCCGGACCAG 61.832 60.000 0.00 0.00 33.16 4.00
460 461 4.154347 CAGCCTCTCCGGACCAGC 62.154 72.222 0.00 2.93 33.16 4.85
461 462 4.390556 AGCCTCTCCGGACCAGCT 62.391 66.667 0.00 5.70 33.16 4.24
462 463 3.394836 GCCTCTCCGGACCAGCTT 61.395 66.667 0.00 0.00 33.16 3.74
463 464 2.581354 CCTCTCCGGACCAGCTTG 59.419 66.667 0.00 0.00 33.16 4.01
464 465 1.984570 CCTCTCCGGACCAGCTTGA 60.985 63.158 0.00 0.00 33.16 3.02
465 466 1.515020 CTCTCCGGACCAGCTTGAG 59.485 63.158 0.00 0.00 0.00 3.02
466 467 1.228894 TCTCCGGACCAGCTTGAGT 60.229 57.895 0.00 0.00 0.00 3.41
467 468 0.832135 TCTCCGGACCAGCTTGAGTT 60.832 55.000 0.00 0.00 0.00 3.01
468 469 0.671781 CTCCGGACCAGCTTGAGTTG 60.672 60.000 0.00 0.00 0.00 3.16
469 470 2.328099 CCGGACCAGCTTGAGTTGC 61.328 63.158 0.00 0.00 0.00 4.17
470 471 1.302033 CGGACCAGCTTGAGTTGCT 60.302 57.895 0.00 0.00 42.06 3.91
478 479 2.760374 AGCTTGAGTTGCTGTCAGTAC 58.240 47.619 0.93 0.68 39.56 2.73
479 480 1.801178 GCTTGAGTTGCTGTCAGTACC 59.199 52.381 0.93 0.00 0.00 3.34
480 481 2.417719 CTTGAGTTGCTGTCAGTACCC 58.582 52.381 0.93 0.00 0.00 3.69
481 482 1.419381 TGAGTTGCTGTCAGTACCCA 58.581 50.000 0.93 0.00 0.00 4.51
482 483 1.070134 TGAGTTGCTGTCAGTACCCAC 59.930 52.381 0.93 0.00 0.00 4.61
483 484 1.344763 GAGTTGCTGTCAGTACCCACT 59.655 52.381 0.93 0.00 34.42 4.00
532 534 2.979676 TCGCACAAAGCAGCTGGG 60.980 61.111 17.12 0.00 46.13 4.45
546 548 0.953960 GCTGGGGGTTACGTCAACAG 60.954 60.000 0.00 0.00 39.04 3.16
563 565 1.152735 AGATTCCTCGAGCGGCCTA 60.153 57.895 6.99 0.00 0.00 3.93
564 566 1.175983 AGATTCCTCGAGCGGCCTAG 61.176 60.000 6.99 0.00 0.00 3.02
565 567 2.148558 GATTCCTCGAGCGGCCTAGG 62.149 65.000 6.99 3.67 0.00 3.02
604 662 3.655031 ACGAACATGCCGCGCAAA 61.655 55.556 8.75 0.00 43.62 3.68
621 679 4.424626 CGCAAACTCTCAGCTGACTAATA 58.575 43.478 13.74 0.00 0.00 0.98
641 699 0.719465 ATTCGTTTGCGCGTCTAAGG 59.281 50.000 8.43 9.21 38.14 2.69
643 701 2.479198 GTTTGCGCGTCTAAGGCC 59.521 61.111 8.43 0.00 0.00 5.19
644 702 2.744709 TTTGCGCGTCTAAGGCCC 60.745 61.111 8.43 0.00 0.00 5.80
645 703 3.248446 TTTGCGCGTCTAAGGCCCT 62.248 57.895 8.43 0.00 0.00 5.19
646 704 3.950794 TTGCGCGTCTAAGGCCCTG 62.951 63.158 8.43 0.00 0.00 4.45
647 705 4.452733 GCGCGTCTAAGGCCCTGT 62.453 66.667 8.43 0.00 0.00 4.00
648 706 2.202756 CGCGTCTAAGGCCCTGTC 60.203 66.667 0.00 0.00 0.00 3.51
649 707 2.711922 CGCGTCTAAGGCCCTGTCT 61.712 63.158 0.00 0.00 0.00 3.41
650 708 1.142097 GCGTCTAAGGCCCTGTCTC 59.858 63.158 0.00 0.00 0.00 3.36
651 709 1.433879 CGTCTAAGGCCCTGTCTCG 59.566 63.158 0.00 0.00 0.00 4.04
652 710 1.030488 CGTCTAAGGCCCTGTCTCGA 61.030 60.000 0.00 0.00 0.00 4.04
653 711 1.183549 GTCTAAGGCCCTGTCTCGAA 58.816 55.000 0.00 0.00 0.00 3.71
654 712 1.549170 GTCTAAGGCCCTGTCTCGAAA 59.451 52.381 0.00 0.00 0.00 3.46
655 713 2.028385 GTCTAAGGCCCTGTCTCGAAAA 60.028 50.000 0.00 0.00 0.00 2.29
656 714 2.635915 TCTAAGGCCCTGTCTCGAAAAA 59.364 45.455 0.00 0.00 0.00 1.94
657 715 1.897560 AAGGCCCTGTCTCGAAAAAG 58.102 50.000 0.00 0.00 0.00 2.27
658 716 0.606673 AGGCCCTGTCTCGAAAAAGC 60.607 55.000 0.00 0.00 0.00 3.51
659 717 1.587043 GGCCCTGTCTCGAAAAAGCC 61.587 60.000 0.00 0.00 0.00 4.35
660 718 1.912371 GCCCTGTCTCGAAAAAGCCG 61.912 60.000 0.00 0.00 0.00 5.52
661 719 1.497722 CCTGTCTCGAAAAAGCCGC 59.502 57.895 0.00 0.00 0.00 6.53
662 720 1.227999 CCTGTCTCGAAAAAGCCGCA 61.228 55.000 0.00 0.00 0.00 5.69
663 721 0.586319 CTGTCTCGAAAAAGCCGCAA 59.414 50.000 0.00 0.00 0.00 4.85
664 722 1.002900 CTGTCTCGAAAAAGCCGCAAA 60.003 47.619 0.00 0.00 0.00 3.68
665 723 1.402259 TGTCTCGAAAAAGCCGCAAAA 59.598 42.857 0.00 0.00 0.00 2.44
666 724 2.044135 GTCTCGAAAAAGCCGCAAAAG 58.956 47.619 0.00 0.00 0.00 2.27
667 725 0.778223 CTCGAAAAAGCCGCAAAAGC 59.222 50.000 0.00 0.00 0.00 3.51
668 726 0.101399 TCGAAAAAGCCGCAAAAGCA 59.899 45.000 0.00 0.00 0.00 3.91
669 727 0.503961 CGAAAAAGCCGCAAAAGCAG 59.496 50.000 0.00 0.00 0.00 4.24
670 728 1.851658 GAAAAAGCCGCAAAAGCAGA 58.148 45.000 0.00 0.00 0.00 4.26
671 729 2.200899 GAAAAAGCCGCAAAAGCAGAA 58.799 42.857 0.00 0.00 0.00 3.02
672 730 1.856802 AAAAGCCGCAAAAGCAGAAG 58.143 45.000 0.00 0.00 0.00 2.85
673 731 0.598419 AAAGCCGCAAAAGCAGAAGC 60.598 50.000 0.00 0.00 42.56 3.86
674 732 1.737355 AAGCCGCAAAAGCAGAAGCA 61.737 50.000 0.00 0.00 45.49 3.91
675 733 1.300080 GCCGCAAAAGCAGAAGCAA 60.300 52.632 0.00 0.00 45.49 3.91
676 734 0.875474 GCCGCAAAAGCAGAAGCAAA 60.875 50.000 0.00 0.00 45.49 3.68
677 735 1.569708 CCGCAAAAGCAGAAGCAAAA 58.430 45.000 0.00 0.00 45.49 2.44
678 736 1.932511 CCGCAAAAGCAGAAGCAAAAA 59.067 42.857 0.00 0.00 45.49 1.94
679 737 2.285776 CCGCAAAAGCAGAAGCAAAAAC 60.286 45.455 0.00 0.00 45.49 2.43
680 738 2.285776 CGCAAAAGCAGAAGCAAAAACC 60.286 45.455 0.00 0.00 45.49 3.27
681 739 2.677337 GCAAAAGCAGAAGCAAAAACCA 59.323 40.909 0.00 0.00 45.49 3.67
682 740 3.126686 GCAAAAGCAGAAGCAAAAACCAA 59.873 39.130 0.00 0.00 45.49 3.67
683 741 4.379290 GCAAAAGCAGAAGCAAAAACCAAA 60.379 37.500 0.00 0.00 45.49 3.28
684 742 4.944962 AAAGCAGAAGCAAAAACCAAAC 57.055 36.364 0.00 0.00 45.49 2.93
685 743 3.608316 AGCAGAAGCAAAAACCAAACA 57.392 38.095 0.00 0.00 45.49 2.83
686 744 3.936564 AGCAGAAGCAAAAACCAAACAA 58.063 36.364 0.00 0.00 45.49 2.83
687 745 4.322567 AGCAGAAGCAAAAACCAAACAAA 58.677 34.783 0.00 0.00 45.49 2.83
688 746 4.154015 AGCAGAAGCAAAAACCAAACAAAC 59.846 37.500 0.00 0.00 45.49 2.93
689 747 4.083590 GCAGAAGCAAAAACCAAACAAACA 60.084 37.500 0.00 0.00 41.58 2.83
690 748 5.620467 CAGAAGCAAAAACCAAACAAACAG 58.380 37.500 0.00 0.00 0.00 3.16
691 749 4.694982 AGAAGCAAAAACCAAACAAACAGG 59.305 37.500 0.00 0.00 0.00 4.00
692 750 3.342719 AGCAAAAACCAAACAAACAGGG 58.657 40.909 0.00 0.00 0.00 4.45
693 751 2.159448 GCAAAAACCAAACAAACAGGGC 60.159 45.455 0.00 0.00 0.00 5.19
694 752 2.411628 AAAACCAAACAAACAGGGCC 57.588 45.000 0.00 0.00 0.00 5.80
695 753 1.578897 AAACCAAACAAACAGGGCCT 58.421 45.000 0.00 0.00 0.00 5.19
696 754 2.463047 AACCAAACAAACAGGGCCTA 57.537 45.000 5.28 0.00 0.00 3.93
697 755 2.463047 ACCAAACAAACAGGGCCTAA 57.537 45.000 5.28 0.00 0.00 2.69
698 756 2.316108 ACCAAACAAACAGGGCCTAAG 58.684 47.619 5.28 0.00 0.00 2.18
699 757 2.091555 ACCAAACAAACAGGGCCTAAGA 60.092 45.455 5.28 0.00 0.00 2.10
700 758 3.165071 CCAAACAAACAGGGCCTAAGAT 58.835 45.455 5.28 0.00 0.00 2.40
723 781 3.877559 TGCTATCCAACATCAGTTCCAG 58.122 45.455 0.00 0.00 35.28 3.86
751 830 7.361457 TCAGAACTATTTCCGGTCTAATGAT 57.639 36.000 0.00 0.00 31.28 2.45
752 831 7.792032 TCAGAACTATTTCCGGTCTAATGATT 58.208 34.615 0.00 0.03 31.28 2.57
759 863 0.504384 CGGTCTAATGATTCTGCGCG 59.496 55.000 0.00 0.00 0.00 6.86
787 891 3.356529 AAGGCTTGACCAATGACTAGG 57.643 47.619 0.00 0.00 43.14 3.02
799 903 5.046520 ACCAATGACTAGGAAACCAGTACTC 60.047 44.000 0.00 0.00 0.00 2.59
818 922 0.179121 CCTACGTACGATGCCAAGCA 60.179 55.000 24.41 0.00 44.86 3.91
823 927 2.387445 TACGATGCCAAGCACACGC 61.387 57.895 14.64 0.00 43.04 5.34
827 931 1.651240 GATGCCAAGCACACGCAGAT 61.651 55.000 0.00 0.00 43.04 2.90
838 942 2.683362 CACACGCAGATGTCTACTCCTA 59.317 50.000 0.00 0.00 0.00 2.94
869 1222 6.480981 TGGTATTAGCGAAATAGTTAACCAGC 59.519 38.462 0.88 0.00 29.87 4.85
884 1242 2.047465 AGCTGACGCTCCTGCTTG 60.047 61.111 0.00 0.00 45.15 4.01
885 1243 3.797546 GCTGACGCTCCTGCTTGC 61.798 66.667 0.00 0.00 36.97 4.01
912 1271 5.801380 TCCGATCCCAAGCCTATAAATAAC 58.199 41.667 0.00 0.00 0.00 1.89
952 1311 3.149981 TGTCCTATCTATCTCACCAGCG 58.850 50.000 0.00 0.00 0.00 5.18
953 1312 3.150767 GTCCTATCTATCTCACCAGCGT 58.849 50.000 0.00 0.00 0.00 5.07
972 1331 3.733337 CGTAGCCATAGAAGCTCCATTT 58.267 45.455 0.00 0.00 41.83 2.32
1122 1481 2.358003 GCCGTGTTCAGCTGCTCT 60.358 61.111 9.47 0.00 0.00 4.09
1151 1510 0.880278 GACAAGTCAGACGCCAAGCA 60.880 55.000 0.00 0.00 0.00 3.91
1194 1553 0.926628 CCGTCGTTGTTGTTTTCGGC 60.927 55.000 0.00 0.00 0.00 5.54
1211 1570 3.019003 GCGGTGGAGGCTGCTAAGA 62.019 63.158 7.74 0.00 37.74 2.10
1212 1571 1.826024 CGGTGGAGGCTGCTAAGAT 59.174 57.895 7.74 0.00 0.00 2.40
1214 1573 0.249657 GGTGGAGGCTGCTAAGATCG 60.250 60.000 7.74 0.00 0.00 3.69
1215 1574 0.461961 GTGGAGGCTGCTAAGATCGT 59.538 55.000 7.74 0.00 0.00 3.73
1216 1575 0.461548 TGGAGGCTGCTAAGATCGTG 59.538 55.000 7.74 0.00 0.00 4.35
1236 1606 1.935300 GCACACGAATCCTTCACGAGT 60.935 52.381 0.00 0.00 0.00 4.18
1238 1608 0.716108 CACGAATCCTTCACGAGTGC 59.284 55.000 0.00 0.00 0.00 4.40
1239 1609 0.732880 ACGAATCCTTCACGAGTGCG 60.733 55.000 0.00 0.00 44.79 5.34
1240 1610 1.413767 CGAATCCTTCACGAGTGCGG 61.414 60.000 0.00 2.14 43.17 5.69
1241 1611 0.108804 GAATCCTTCACGAGTGCGGA 60.109 55.000 13.54 13.54 43.17 5.54
1242 1612 0.389948 AATCCTTCACGAGTGCGGAC 60.390 55.000 13.48 0.00 43.17 4.79
1243 1613 2.227089 ATCCTTCACGAGTGCGGACC 62.227 60.000 2.38 0.00 43.17 4.46
1244 1614 2.432628 CTTCACGAGTGCGGACCC 60.433 66.667 2.38 0.00 43.17 4.46
1321 1694 9.075678 TGTGCCTTCTCTAGTACTATTATTACC 57.924 37.037 2.33 0.00 0.00 2.85
1347 1720 4.287067 ACCCTTGATATATGGTGTGCCTAG 59.713 45.833 0.00 0.00 35.27 3.02
1348 1721 4.323792 CCCTTGATATATGGTGTGCCTAGG 60.324 50.000 3.67 3.67 35.27 3.02
1369 2810 4.399303 AGGAAATTTAATGCCTGTTCTCGG 59.601 41.667 0.00 0.00 0.00 4.63
1371 2812 5.355910 GGAAATTTAATGCCTGTTCTCGGTA 59.644 40.000 0.00 0.00 0.00 4.02
1388 2829 9.740239 GTTCTCGGTAATATTTGTACTCATGTA 57.260 33.333 0.00 0.00 0.00 2.29
1504 2960 7.615403 TGATCCCCATTATCTTATTTCTCTCG 58.385 38.462 0.00 0.00 0.00 4.04
1507 2963 5.864474 CCCCATTATCTTATTTCTCTCGACG 59.136 44.000 0.00 0.00 0.00 5.12
1508 2964 5.346281 CCCATTATCTTATTTCTCTCGACGC 59.654 44.000 0.00 0.00 0.00 5.19
1565 3404 5.496133 TGTACTTAGTATCTCGAAGGTGC 57.504 43.478 0.00 0.00 33.97 5.01
1566 3405 4.945543 TGTACTTAGTATCTCGAAGGTGCA 59.054 41.667 0.00 0.00 33.97 4.57
1575 3414 1.751351 CTCGAAGGTGCACTCATAGGA 59.249 52.381 17.98 6.28 0.00 2.94
1587 3426 2.706190 ACTCATAGGATTAGGGTGTGCC 59.294 50.000 0.00 0.00 0.00 5.01
1617 3464 2.542020 TGGGTGAGTGTATGTGTGTG 57.458 50.000 0.00 0.00 0.00 3.82
1642 3809 2.549992 GGGGCATGCATCTACATCGTAA 60.550 50.000 21.36 0.00 0.00 3.18
1646 3813 5.411361 GGGCATGCATCTACATCGTAAAATA 59.589 40.000 21.36 0.00 0.00 1.40
1665 3844 9.925268 GTAAAATATAAACATACCACCTCAACG 57.075 33.333 0.00 0.00 0.00 4.10
1670 3849 1.078709 CATACCACCTCAACGTGCAG 58.921 55.000 0.00 0.00 32.10 4.41
1677 3856 1.343142 ACCTCAACGTGCAGACATACA 59.657 47.619 0.00 0.00 0.00 2.29
1685 3864 1.827969 GTGCAGACATACAGAGGGAGT 59.172 52.381 0.00 0.00 0.00 3.85
1690 3869 4.527944 CAGACATACAGAGGGAGTACTGA 58.472 47.826 0.00 0.00 37.54 3.41
1719 3898 6.062095 AGCTTAGCCGTTTCCATTATGTTAT 58.938 36.000 0.00 0.00 0.00 1.89
1721 3900 6.627395 TTAGCCGTTTCCATTATGTTATGG 57.373 37.500 0.00 0.00 45.34 2.74
1841 4020 2.602878 TGTTCGATGTAACCGAAGCTC 58.397 47.619 0.00 0.00 45.15 4.09
1845 4024 1.189403 GATGTAACCGAAGCTCGTCG 58.811 55.000 0.66 0.66 38.40 5.12
1852 4031 0.504384 CCGAAGCTCGTCGCAATATG 59.496 55.000 2.17 0.00 42.61 1.78
1871 4050 1.411977 TGTTGCAACCAAATCCCACAG 59.588 47.619 26.14 0.00 31.68 3.66
1872 4051 0.392336 TTGCAACCAAATCCCACAGC 59.608 50.000 0.00 0.00 0.00 4.40
1876 4055 1.411977 CAACCAAATCCCACAGCAACA 59.588 47.619 0.00 0.00 0.00 3.33
1897 4076 2.233271 CACTGGGTTGCTTGTTCTGAT 58.767 47.619 0.00 0.00 0.00 2.90
1901 4080 1.815003 GGGTTGCTTGTTCTGATGAGG 59.185 52.381 0.00 0.00 0.00 3.86
1914 4093 4.201657 TCTGATGAGGTACCAATGCATTG 58.798 43.478 28.91 28.91 37.52 2.82
1933 4112 7.675062 TGCATTGACCAAAGTTTATACCAATT 58.325 30.769 0.00 0.00 0.00 2.32
1934 4113 7.601886 TGCATTGACCAAAGTTTATACCAATTG 59.398 33.333 0.00 0.00 0.00 2.32
1937 4116 8.472007 TTGACCAAAGTTTATACCAATTGTCT 57.528 30.769 4.43 0.00 0.00 3.41
1949 4129 5.528043 ACCAATTGTCTGCACATTTTGTA 57.472 34.783 4.43 0.00 30.55 2.41
2004 4184 2.027192 TCTTCGATAACAAGGCAAGGCT 60.027 45.455 0.00 0.00 0.00 4.58
2007 4187 4.948341 TCGATAACAAGGCAAGGCTATA 57.052 40.909 0.00 0.00 0.00 1.31
2017 4197 6.071896 ACAAGGCAAGGCTATAAAGAAGAAAC 60.072 38.462 0.00 0.00 0.00 2.78
2187 4380 8.929746 ACGAAGTATACATCAATATGAATGCTG 58.070 33.333 5.50 0.00 41.94 4.41
2196 4389 8.262227 ACATCAATATGAATGCTGGATTTGTTT 58.738 29.630 0.00 0.00 36.54 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.650322 TCTCGTTTCCCTTGCAAACTT 58.350 42.857 0.00 0.00 32.46 2.66
1 2 2.341846 TCTCGTTTCCCTTGCAAACT 57.658 45.000 0.00 0.00 32.46 2.66
2 3 3.430333 TTTCTCGTTTCCCTTGCAAAC 57.570 42.857 0.00 0.00 0.00 2.93
3 4 4.320935 GCTATTTCTCGTTTCCCTTGCAAA 60.321 41.667 0.00 0.00 0.00 3.68
4 5 3.190535 GCTATTTCTCGTTTCCCTTGCAA 59.809 43.478 0.00 0.00 0.00 4.08
5 6 2.747446 GCTATTTCTCGTTTCCCTTGCA 59.253 45.455 0.00 0.00 0.00 4.08
6 7 2.747446 TGCTATTTCTCGTTTCCCTTGC 59.253 45.455 0.00 0.00 0.00 4.01
7 8 5.371115 TTTGCTATTTCTCGTTTCCCTTG 57.629 39.130 0.00 0.00 0.00 3.61
8 9 5.710099 TCATTTGCTATTTCTCGTTTCCCTT 59.290 36.000 0.00 0.00 0.00 3.95
9 10 5.253330 TCATTTGCTATTTCTCGTTTCCCT 58.747 37.500 0.00 0.00 0.00 4.20
10 11 5.560966 TCATTTGCTATTTCTCGTTTCCC 57.439 39.130 0.00 0.00 0.00 3.97
11 12 8.466086 AAATTCATTTGCTATTTCTCGTTTCC 57.534 30.769 0.00 0.00 0.00 3.13
36 37 9.985318 CAAACTTTGCATTTTCTCACAAAATAA 57.015 25.926 0.00 0.00 32.09 1.40
54 55 1.879380 TCCACCGAGATGCAAACTTTG 59.121 47.619 0.00 0.00 0.00 2.77
55 56 2.270352 TCCACCGAGATGCAAACTTT 57.730 45.000 0.00 0.00 0.00 2.66
56 57 2.489329 CAATCCACCGAGATGCAAACTT 59.511 45.455 0.00 0.00 0.00 2.66
57 58 2.086869 CAATCCACCGAGATGCAAACT 58.913 47.619 0.00 0.00 0.00 2.66
58 59 2.083774 TCAATCCACCGAGATGCAAAC 58.916 47.619 0.00 0.00 0.00 2.93
59 60 2.083774 GTCAATCCACCGAGATGCAAA 58.916 47.619 0.00 0.00 0.00 3.68
60 61 1.003003 TGTCAATCCACCGAGATGCAA 59.997 47.619 0.00 0.00 0.00 4.08
61 62 0.612744 TGTCAATCCACCGAGATGCA 59.387 50.000 0.00 0.00 0.00 3.96
62 63 1.293924 CTGTCAATCCACCGAGATGC 58.706 55.000 0.00 0.00 0.00 3.91
63 64 1.482182 TCCTGTCAATCCACCGAGATG 59.518 52.381 0.00 0.00 0.00 2.90
64 65 1.866015 TCCTGTCAATCCACCGAGAT 58.134 50.000 0.00 0.00 0.00 2.75
65 66 1.550524 CTTCCTGTCAATCCACCGAGA 59.449 52.381 0.00 0.00 0.00 4.04
66 67 1.550524 TCTTCCTGTCAATCCACCGAG 59.449 52.381 0.00 0.00 0.00 4.63
67 68 1.639722 TCTTCCTGTCAATCCACCGA 58.360 50.000 0.00 0.00 0.00 4.69
68 69 2.472695 TTCTTCCTGTCAATCCACCG 57.527 50.000 0.00 0.00 0.00 4.94
69 70 4.021102 TCTTTCTTCCTGTCAATCCACC 57.979 45.455 0.00 0.00 0.00 4.61
70 71 5.006386 ACATCTTTCTTCCTGTCAATCCAC 58.994 41.667 0.00 0.00 0.00 4.02
71 72 5.246981 ACATCTTTCTTCCTGTCAATCCA 57.753 39.130 0.00 0.00 0.00 3.41
72 73 6.173339 TGTACATCTTTCTTCCTGTCAATCC 58.827 40.000 0.00 0.00 0.00 3.01
73 74 7.389053 AGTTGTACATCTTTCTTCCTGTCAATC 59.611 37.037 0.00 0.00 0.00 2.67
74 75 7.173907 CAGTTGTACATCTTTCTTCCTGTCAAT 59.826 37.037 3.61 0.00 0.00 2.57
75 76 6.483307 CAGTTGTACATCTTTCTTCCTGTCAA 59.517 38.462 3.61 0.00 0.00 3.18
76 77 5.991606 CAGTTGTACATCTTTCTTCCTGTCA 59.008 40.000 3.61 0.00 0.00 3.58
77 78 5.992217 ACAGTTGTACATCTTTCTTCCTGTC 59.008 40.000 3.61 0.00 0.00 3.51
78 79 5.930135 ACAGTTGTACATCTTTCTTCCTGT 58.070 37.500 3.61 0.00 0.00 4.00
92 93 5.064441 AGTATTGGGTCGTACAGTTGTAC 57.936 43.478 11.48 11.48 45.47 2.90
93 94 5.357878 CCTAGTATTGGGTCGTACAGTTGTA 59.642 44.000 0.00 0.00 0.00 2.41
94 95 4.159135 CCTAGTATTGGGTCGTACAGTTGT 59.841 45.833 0.00 0.00 0.00 3.32
95 96 4.679662 CCTAGTATTGGGTCGTACAGTTG 58.320 47.826 0.00 0.00 0.00 3.16
96 97 3.131755 GCCTAGTATTGGGTCGTACAGTT 59.868 47.826 0.00 0.00 0.00 3.16
97 98 2.692041 GCCTAGTATTGGGTCGTACAGT 59.308 50.000 0.00 0.00 0.00 3.55
98 99 2.035576 GGCCTAGTATTGGGTCGTACAG 59.964 54.545 0.00 0.00 0.00 2.74
99 100 2.034124 GGCCTAGTATTGGGTCGTACA 58.966 52.381 0.00 0.00 0.00 2.90
100 101 1.000938 CGGCCTAGTATTGGGTCGTAC 60.001 57.143 6.47 0.00 44.47 3.67
101 102 1.321474 CGGCCTAGTATTGGGTCGTA 58.679 55.000 6.47 0.00 44.47 3.43
102 103 2.121645 CGGCCTAGTATTGGGTCGT 58.878 57.895 6.47 0.00 44.47 4.34
104 105 1.483415 TGTTCGGCCTAGTATTGGGTC 59.517 52.381 0.00 0.00 0.00 4.46
105 106 1.485066 CTGTTCGGCCTAGTATTGGGT 59.515 52.381 0.00 0.00 0.00 4.51
106 107 1.760613 TCTGTTCGGCCTAGTATTGGG 59.239 52.381 0.00 0.00 0.00 4.12
107 108 2.798499 CGTCTGTTCGGCCTAGTATTGG 60.798 54.545 0.00 0.00 0.00 3.16
108 109 2.460918 CGTCTGTTCGGCCTAGTATTG 58.539 52.381 0.00 0.00 0.00 1.90
109 110 1.407979 CCGTCTGTTCGGCCTAGTATT 59.592 52.381 0.00 0.00 43.96 1.89
110 111 1.030457 CCGTCTGTTCGGCCTAGTAT 58.970 55.000 0.00 0.00 43.96 2.12
111 112 2.485677 CCGTCTGTTCGGCCTAGTA 58.514 57.895 0.00 0.00 43.96 1.82
112 113 3.285371 CCGTCTGTTCGGCCTAGT 58.715 61.111 0.00 0.00 43.96 2.57
119 120 0.596577 TGAAGAGTCCCGTCTGTTCG 59.403 55.000 0.00 0.00 39.53 3.95
120 121 1.887198 TCTGAAGAGTCCCGTCTGTTC 59.113 52.381 0.00 0.00 37.94 3.18
121 122 1.614413 GTCTGAAGAGTCCCGTCTGTT 59.386 52.381 0.00 0.00 0.00 3.16
122 123 1.249407 GTCTGAAGAGTCCCGTCTGT 58.751 55.000 0.00 0.00 0.00 3.41
123 124 1.201181 CTGTCTGAAGAGTCCCGTCTG 59.799 57.143 0.00 0.00 0.00 3.51
124 125 1.540267 CTGTCTGAAGAGTCCCGTCT 58.460 55.000 0.00 0.00 0.00 4.18
125 126 0.528470 CCTGTCTGAAGAGTCCCGTC 59.472 60.000 0.00 0.00 0.00 4.79
126 127 0.112606 TCCTGTCTGAAGAGTCCCGT 59.887 55.000 0.00 0.00 0.00 5.28
127 128 1.479709 ATCCTGTCTGAAGAGTCCCG 58.520 55.000 0.00 0.00 0.00 5.14
128 129 4.651503 TCATAATCCTGTCTGAAGAGTCCC 59.348 45.833 0.00 0.00 0.00 4.46
129 130 5.452636 GGTCATAATCCTGTCTGAAGAGTCC 60.453 48.000 0.00 0.00 0.00 3.85
130 131 5.127845 TGGTCATAATCCTGTCTGAAGAGTC 59.872 44.000 0.00 0.00 0.00 3.36
131 132 5.026121 TGGTCATAATCCTGTCTGAAGAGT 58.974 41.667 0.00 0.00 0.00 3.24
132 133 5.604758 TGGTCATAATCCTGTCTGAAGAG 57.395 43.478 0.00 0.00 0.00 2.85
133 134 5.248248 TGTTGGTCATAATCCTGTCTGAAGA 59.752 40.000 0.00 0.00 0.00 2.87
134 135 5.491070 TGTTGGTCATAATCCTGTCTGAAG 58.509 41.667 0.00 0.00 0.00 3.02
135 136 5.497464 TGTTGGTCATAATCCTGTCTGAA 57.503 39.130 0.00 0.00 0.00 3.02
136 137 5.245531 GTTGTTGGTCATAATCCTGTCTGA 58.754 41.667 0.00 0.00 0.00 3.27
137 138 4.396166 GGTTGTTGGTCATAATCCTGTCTG 59.604 45.833 0.00 0.00 0.00 3.51
138 139 4.589908 GGTTGTTGGTCATAATCCTGTCT 58.410 43.478 0.00 0.00 0.00 3.41
139 140 3.374058 CGGTTGTTGGTCATAATCCTGTC 59.626 47.826 0.00 0.00 0.00 3.51
140 141 3.343617 CGGTTGTTGGTCATAATCCTGT 58.656 45.455 0.00 0.00 0.00 4.00
141 142 2.097466 GCGGTTGTTGGTCATAATCCTG 59.903 50.000 0.00 0.00 0.00 3.86
142 143 2.365582 GCGGTTGTTGGTCATAATCCT 58.634 47.619 0.00 0.00 0.00 3.24
143 144 1.404035 GGCGGTTGTTGGTCATAATCC 59.596 52.381 0.00 0.00 0.00 3.01
144 145 1.404035 GGGCGGTTGTTGGTCATAATC 59.596 52.381 0.00 0.00 0.00 1.75
145 146 1.272203 TGGGCGGTTGTTGGTCATAAT 60.272 47.619 0.00 0.00 0.00 1.28
146 147 0.110678 TGGGCGGTTGTTGGTCATAA 59.889 50.000 0.00 0.00 0.00 1.90
147 148 0.110678 TTGGGCGGTTGTTGGTCATA 59.889 50.000 0.00 0.00 0.00 2.15
148 149 1.152652 TTGGGCGGTTGTTGGTCAT 60.153 52.632 0.00 0.00 0.00 3.06
149 150 2.122167 GTTGGGCGGTTGTTGGTCA 61.122 57.895 0.00 0.00 0.00 4.02
150 151 1.460273 ATGTTGGGCGGTTGTTGGTC 61.460 55.000 0.00 0.00 0.00 4.02
151 152 1.045911 AATGTTGGGCGGTTGTTGGT 61.046 50.000 0.00 0.00 0.00 3.67
152 153 0.599728 CAATGTTGGGCGGTTGTTGG 60.600 55.000 0.00 0.00 0.00 3.77
153 154 0.599728 CCAATGTTGGGCGGTTGTTG 60.600 55.000 3.80 0.00 44.70 3.33
154 155 1.745264 CCAATGTTGGGCGGTTGTT 59.255 52.632 3.80 0.00 44.70 2.83
155 156 3.453988 CCAATGTTGGGCGGTTGT 58.546 55.556 3.80 0.00 44.70 3.32
164 165 6.649973 TGCTGGTCATAATTTTTCCAATGTTG 59.350 34.615 0.00 0.00 0.00 3.33
165 166 6.767456 TGCTGGTCATAATTTTTCCAATGTT 58.233 32.000 0.00 0.00 0.00 2.71
166 167 6.357579 TGCTGGTCATAATTTTTCCAATGT 57.642 33.333 0.00 0.00 0.00 2.71
167 168 7.654520 CCTATGCTGGTCATAATTTTTCCAATG 59.345 37.037 0.00 0.00 37.22 2.82
168 169 7.564660 TCCTATGCTGGTCATAATTTTTCCAAT 59.435 33.333 0.00 0.00 37.22 3.16
169 170 6.894654 TCCTATGCTGGTCATAATTTTTCCAA 59.105 34.615 0.00 0.00 37.22 3.53
170 171 6.430864 TCCTATGCTGGTCATAATTTTTCCA 58.569 36.000 0.00 0.00 37.22 3.53
171 172 6.959639 TCCTATGCTGGTCATAATTTTTCC 57.040 37.500 0.00 0.00 37.22 3.13
172 173 9.822185 ATTTTCCTATGCTGGTCATAATTTTTC 57.178 29.630 0.00 0.00 37.22 2.29
173 174 9.822185 GATTTTCCTATGCTGGTCATAATTTTT 57.178 29.630 0.00 0.00 37.22 1.94
174 175 9.205513 AGATTTTCCTATGCTGGTCATAATTTT 57.794 29.630 0.00 0.00 37.22 1.82
175 176 8.773033 AGATTTTCCTATGCTGGTCATAATTT 57.227 30.769 0.00 0.00 37.22 1.82
176 177 7.173907 CGAGATTTTCCTATGCTGGTCATAATT 59.826 37.037 0.00 0.00 37.22 1.40
177 178 6.652481 CGAGATTTTCCTATGCTGGTCATAAT 59.348 38.462 0.00 0.00 37.22 1.28
178 179 5.991606 CGAGATTTTCCTATGCTGGTCATAA 59.008 40.000 0.00 0.00 37.22 1.90
179 180 5.511373 CCGAGATTTTCCTATGCTGGTCATA 60.511 44.000 0.00 0.00 36.63 2.15
180 181 4.384056 CGAGATTTTCCTATGCTGGTCAT 58.616 43.478 0.00 0.00 39.17 3.06
181 182 3.432186 CCGAGATTTTCCTATGCTGGTCA 60.432 47.826 0.00 0.00 0.00 4.02
182 183 3.134458 CCGAGATTTTCCTATGCTGGTC 58.866 50.000 0.00 0.00 0.00 4.02
183 184 2.746472 GCCGAGATTTTCCTATGCTGGT 60.746 50.000 0.00 0.00 0.00 4.00
184 185 1.876156 GCCGAGATTTTCCTATGCTGG 59.124 52.381 0.00 0.00 0.00 4.85
185 186 1.528586 CGCCGAGATTTTCCTATGCTG 59.471 52.381 0.00 0.00 0.00 4.41
186 187 1.139058 ACGCCGAGATTTTCCTATGCT 59.861 47.619 0.00 0.00 0.00 3.79
187 188 1.583054 ACGCCGAGATTTTCCTATGC 58.417 50.000 0.00 0.00 0.00 3.14
188 189 4.238761 TCTACGCCGAGATTTTCCTATG 57.761 45.455 0.00 0.00 0.00 2.23
189 190 4.931661 TTCTACGCCGAGATTTTCCTAT 57.068 40.909 0.00 0.00 0.00 2.57
190 191 4.400251 TCTTTCTACGCCGAGATTTTCCTA 59.600 41.667 0.00 0.00 0.00 2.94
191 192 3.194968 TCTTTCTACGCCGAGATTTTCCT 59.805 43.478 0.00 0.00 0.00 3.36
192 193 3.518590 TCTTTCTACGCCGAGATTTTCC 58.481 45.455 0.00 0.00 0.00 3.13
193 194 5.526010 TTTCTTTCTACGCCGAGATTTTC 57.474 39.130 0.00 0.00 0.00 2.29
194 195 5.334646 GGTTTTCTTTCTACGCCGAGATTTT 60.335 40.000 0.00 0.00 0.00 1.82
195 196 4.153655 GGTTTTCTTTCTACGCCGAGATTT 59.846 41.667 0.00 0.00 0.00 2.17
196 197 3.683340 GGTTTTCTTTCTACGCCGAGATT 59.317 43.478 0.00 0.00 0.00 2.40
197 198 3.056035 AGGTTTTCTTTCTACGCCGAGAT 60.056 43.478 0.00 0.00 0.00 2.75
198 199 2.298163 AGGTTTTCTTTCTACGCCGAGA 59.702 45.455 0.00 0.00 0.00 4.04
199 200 2.685100 AGGTTTTCTTTCTACGCCGAG 58.315 47.619 0.00 0.00 0.00 4.63
200 201 2.803956 CAAGGTTTTCTTTCTACGCCGA 59.196 45.455 0.00 0.00 32.41 5.54
201 202 2.803956 TCAAGGTTTTCTTTCTACGCCG 59.196 45.455 0.00 0.00 32.41 6.46
202 203 3.365064 GCTCAAGGTTTTCTTTCTACGCC 60.365 47.826 0.00 0.00 32.41 5.68
203 204 3.250040 TGCTCAAGGTTTTCTTTCTACGC 59.750 43.478 0.00 0.00 32.41 4.42
204 205 4.272504 TGTGCTCAAGGTTTTCTTTCTACG 59.727 41.667 0.00 0.00 32.41 3.51
205 206 5.751243 TGTGCTCAAGGTTTTCTTTCTAC 57.249 39.130 0.00 0.00 32.41 2.59
206 207 4.275936 GCTGTGCTCAAGGTTTTCTTTCTA 59.724 41.667 0.00 0.00 32.41 2.10
207 208 3.067320 GCTGTGCTCAAGGTTTTCTTTCT 59.933 43.478 0.00 0.00 32.41 2.52
208 209 3.375642 GCTGTGCTCAAGGTTTTCTTTC 58.624 45.455 0.00 0.00 32.41 2.62
209 210 2.101415 GGCTGTGCTCAAGGTTTTCTTT 59.899 45.455 0.00 0.00 32.41 2.52
210 211 1.683385 GGCTGTGCTCAAGGTTTTCTT 59.317 47.619 0.00 0.00 35.79 2.52
211 212 1.322442 GGCTGTGCTCAAGGTTTTCT 58.678 50.000 0.00 0.00 0.00 2.52
212 213 1.032014 TGGCTGTGCTCAAGGTTTTC 58.968 50.000 0.00 0.00 0.00 2.29
213 214 1.484038 TTGGCTGTGCTCAAGGTTTT 58.516 45.000 0.00 0.00 0.00 2.43
214 215 1.342174 CATTGGCTGTGCTCAAGGTTT 59.658 47.619 0.00 0.00 0.00 3.27
215 216 0.963962 CATTGGCTGTGCTCAAGGTT 59.036 50.000 0.00 0.00 0.00 3.50
216 217 0.111061 TCATTGGCTGTGCTCAAGGT 59.889 50.000 0.00 0.00 0.00 3.50
217 218 1.250328 TTCATTGGCTGTGCTCAAGG 58.750 50.000 0.00 0.00 0.00 3.61
218 219 3.374220 TTTTCATTGGCTGTGCTCAAG 57.626 42.857 0.00 0.00 0.00 3.02
219 220 3.815856 TTTTTCATTGGCTGTGCTCAA 57.184 38.095 0.00 0.00 0.00 3.02
236 237 7.168905 ACCTCTTATGGAGATCTTTCGTTTTT 58.831 34.615 0.00 0.00 44.45 1.94
237 238 6.712276 ACCTCTTATGGAGATCTTTCGTTTT 58.288 36.000 0.00 0.00 44.45 2.43
238 239 6.301169 ACCTCTTATGGAGATCTTTCGTTT 57.699 37.500 0.00 0.00 44.45 3.60
239 240 5.941555 ACCTCTTATGGAGATCTTTCGTT 57.058 39.130 0.00 0.00 44.45 3.85
240 241 5.941555 AACCTCTTATGGAGATCTTTCGT 57.058 39.130 0.00 0.00 44.45 3.85
241 242 5.007136 GCAAACCTCTTATGGAGATCTTTCG 59.993 44.000 0.00 0.00 44.45 3.46
242 243 5.007136 CGCAAACCTCTTATGGAGATCTTTC 59.993 44.000 0.00 0.00 44.45 2.62
243 244 4.878397 CGCAAACCTCTTATGGAGATCTTT 59.122 41.667 0.00 0.00 44.45 2.52
244 245 4.080863 ACGCAAACCTCTTATGGAGATCTT 60.081 41.667 0.00 0.00 44.45 2.40
245 246 3.452627 ACGCAAACCTCTTATGGAGATCT 59.547 43.478 0.00 0.00 44.45 2.75
246 247 3.798202 ACGCAAACCTCTTATGGAGATC 58.202 45.455 0.00 0.00 44.45 2.75
247 248 3.914426 ACGCAAACCTCTTATGGAGAT 57.086 42.857 0.00 0.00 44.45 2.75
248 249 4.021229 TCTACGCAAACCTCTTATGGAGA 58.979 43.478 0.00 0.00 44.45 3.71
249 250 4.386867 TCTACGCAAACCTCTTATGGAG 57.613 45.455 0.00 0.00 41.51 3.86
250 251 4.161565 ACATCTACGCAAACCTCTTATGGA 59.838 41.667 0.00 0.00 0.00 3.41
251 252 4.442706 ACATCTACGCAAACCTCTTATGG 58.557 43.478 0.00 0.00 0.00 2.74
252 253 7.534085 TTAACATCTACGCAAACCTCTTATG 57.466 36.000 0.00 0.00 0.00 1.90
253 254 8.556213 TTTTAACATCTACGCAAACCTCTTAT 57.444 30.769 0.00 0.00 0.00 1.73
254 255 7.966246 TTTTAACATCTACGCAAACCTCTTA 57.034 32.000 0.00 0.00 0.00 2.10
255 256 6.870971 TTTTAACATCTACGCAAACCTCTT 57.129 33.333 0.00 0.00 0.00 2.85
256 257 7.361799 GGAATTTTAACATCTACGCAAACCTCT 60.362 37.037 0.00 0.00 0.00 3.69
257 258 6.745907 GGAATTTTAACATCTACGCAAACCTC 59.254 38.462 0.00 0.00 0.00 3.85
258 259 6.433093 AGGAATTTTAACATCTACGCAAACCT 59.567 34.615 0.00 0.00 0.00 3.50
259 260 6.617879 AGGAATTTTAACATCTACGCAAACC 58.382 36.000 0.00 0.00 0.00 3.27
260 261 9.221775 CATAGGAATTTTAACATCTACGCAAAC 57.778 33.333 0.00 0.00 0.00 2.93
261 262 9.168451 TCATAGGAATTTTAACATCTACGCAAA 57.832 29.630 0.00 0.00 0.00 3.68
262 263 8.725405 TCATAGGAATTTTAACATCTACGCAA 57.275 30.769 0.00 0.00 0.00 4.85
263 264 8.725405 TTCATAGGAATTTTAACATCTACGCA 57.275 30.769 0.00 0.00 0.00 5.24
264 265 8.827677 ACTTCATAGGAATTTTAACATCTACGC 58.172 33.333 0.00 0.00 31.34 4.42
276 277 9.988815 CTATGCTACTACACTTCATAGGAATTT 57.011 33.333 0.00 0.00 35.32 1.82
277 278 9.148879 ACTATGCTACTACACTTCATAGGAATT 57.851 33.333 10.94 0.00 40.29 2.17
278 279 8.713708 ACTATGCTACTACACTTCATAGGAAT 57.286 34.615 10.94 0.00 40.29 3.01
279 280 9.636789 TTACTATGCTACTACACTTCATAGGAA 57.363 33.333 10.94 6.76 40.29 3.36
280 281 9.636789 TTTACTATGCTACTACACTTCATAGGA 57.363 33.333 10.94 1.47 40.29 2.94
309 310 7.872061 ATGGGAGTTTTTCCTAAGGATTTTT 57.128 32.000 0.00 0.00 45.98 1.94
310 311 8.966155 TTATGGGAGTTTTTCCTAAGGATTTT 57.034 30.769 0.00 0.00 45.98 1.82
311 312 8.398743 TCTTATGGGAGTTTTTCCTAAGGATTT 58.601 33.333 0.00 0.00 45.98 2.17
312 313 7.939781 TCTTATGGGAGTTTTTCCTAAGGATT 58.060 34.615 0.00 0.00 45.98 3.01
313 314 7.525158 TCTTATGGGAGTTTTTCCTAAGGAT 57.475 36.000 0.00 0.00 45.98 3.24
314 315 6.963117 TCTTATGGGAGTTTTTCCTAAGGA 57.037 37.500 0.00 0.00 45.98 3.36
315 316 7.834181 TCAATCTTATGGGAGTTTTTCCTAAGG 59.166 37.037 0.00 0.00 45.98 2.69
316 317 8.807948 TCAATCTTATGGGAGTTTTTCCTAAG 57.192 34.615 0.00 0.00 45.98 2.18
317 318 9.768215 ATTCAATCTTATGGGAGTTTTTCCTAA 57.232 29.630 0.00 0.00 45.98 2.69
318 319 9.408648 GATTCAATCTTATGGGAGTTTTTCCTA 57.591 33.333 0.00 0.00 45.98 2.94
319 320 7.343057 GGATTCAATCTTATGGGAGTTTTTCCT 59.657 37.037 0.00 0.00 45.98 3.36
320 321 7.343057 AGGATTCAATCTTATGGGAGTTTTTCC 59.657 37.037 0.00 0.00 46.00 3.13
321 322 8.298729 AGGATTCAATCTTATGGGAGTTTTTC 57.701 34.615 0.00 0.00 0.00 2.29
322 323 9.190317 GTAGGATTCAATCTTATGGGAGTTTTT 57.810 33.333 0.00 0.00 0.00 1.94
323 324 8.336235 TGTAGGATTCAATCTTATGGGAGTTTT 58.664 33.333 0.00 0.00 0.00 2.43
324 325 7.872138 TGTAGGATTCAATCTTATGGGAGTTT 58.128 34.615 0.00 0.00 0.00 2.66
325 326 7.451731 TGTAGGATTCAATCTTATGGGAGTT 57.548 36.000 0.00 0.00 0.00 3.01
326 327 7.072961 ACATGTAGGATTCAATCTTATGGGAGT 59.927 37.037 0.00 0.00 0.00 3.85
327 328 7.456725 ACATGTAGGATTCAATCTTATGGGAG 58.543 38.462 0.00 0.00 0.00 4.30
328 329 7.072328 TGACATGTAGGATTCAATCTTATGGGA 59.928 37.037 0.00 0.00 0.00 4.37
329 330 7.226441 TGACATGTAGGATTCAATCTTATGGG 58.774 38.462 0.00 0.00 0.00 4.00
330 331 8.681486 TTGACATGTAGGATTCAATCTTATGG 57.319 34.615 0.00 0.00 0.00 2.74
333 334 8.623903 GCATTTGACATGTAGGATTCAATCTTA 58.376 33.333 0.00 0.00 0.00 2.10
334 335 7.417116 GGCATTTGACATGTAGGATTCAATCTT 60.417 37.037 0.00 0.00 0.00 2.40
335 336 6.040166 GGCATTTGACATGTAGGATTCAATCT 59.960 38.462 0.00 0.00 0.00 2.40
336 337 6.211515 GGCATTTGACATGTAGGATTCAATC 58.788 40.000 0.00 0.00 0.00 2.67
337 338 5.221106 CGGCATTTGACATGTAGGATTCAAT 60.221 40.000 0.00 0.00 0.00 2.57
338 339 4.096231 CGGCATTTGACATGTAGGATTCAA 59.904 41.667 0.00 0.00 0.00 2.69
339 340 3.627123 CGGCATTTGACATGTAGGATTCA 59.373 43.478 0.00 0.00 0.00 2.57
340 341 3.876914 TCGGCATTTGACATGTAGGATTC 59.123 43.478 0.00 0.00 0.00 2.52
341 342 3.884895 TCGGCATTTGACATGTAGGATT 58.115 40.909 0.00 0.00 0.00 3.01
342 343 3.558931 TCGGCATTTGACATGTAGGAT 57.441 42.857 0.00 0.00 0.00 3.24
343 344 3.006940 GTTCGGCATTTGACATGTAGGA 58.993 45.455 0.00 0.00 0.00 2.94
344 345 2.746904 TGTTCGGCATTTGACATGTAGG 59.253 45.455 0.00 0.00 0.00 3.18
345 346 4.621068 ATGTTCGGCATTTGACATGTAG 57.379 40.909 0.00 0.00 33.14 2.74
346 347 4.574421 CCTATGTTCGGCATTTGACATGTA 59.426 41.667 0.00 0.00 38.94 2.29
347 348 3.378112 CCTATGTTCGGCATTTGACATGT 59.622 43.478 0.00 0.00 38.94 3.21
348 349 3.627123 TCCTATGTTCGGCATTTGACATG 59.373 43.478 0.00 0.00 38.94 3.21
349 350 3.884895 TCCTATGTTCGGCATTTGACAT 58.115 40.909 0.00 0.00 38.94 3.06
350 351 3.342377 TCCTATGTTCGGCATTTGACA 57.658 42.857 0.00 0.00 38.94 3.58
351 352 4.695217 TTTCCTATGTTCGGCATTTGAC 57.305 40.909 0.00 0.00 38.94 3.18
352 353 5.713792 TTTTTCCTATGTTCGGCATTTGA 57.286 34.783 0.00 0.00 38.94 2.69
353 354 6.332630 AGATTTTTCCTATGTTCGGCATTTG 58.667 36.000 0.00 0.00 38.94 2.32
354 355 6.530019 AGATTTTTCCTATGTTCGGCATTT 57.470 33.333 0.00 0.00 38.94 2.32
355 356 6.530019 AAGATTTTTCCTATGTTCGGCATT 57.470 33.333 0.00 0.00 38.94 3.56
356 357 7.639113 TTAAGATTTTTCCTATGTTCGGCAT 57.361 32.000 0.00 0.00 41.42 4.40
357 358 6.404293 GCTTAAGATTTTTCCTATGTTCGGCA 60.404 38.462 6.67 0.00 0.00 5.69
358 359 5.971792 GCTTAAGATTTTTCCTATGTTCGGC 59.028 40.000 6.67 0.00 0.00 5.54
359 360 7.083875 TGCTTAAGATTTTTCCTATGTTCGG 57.916 36.000 6.67 0.00 0.00 4.30
360 361 8.616076 AGATGCTTAAGATTTTTCCTATGTTCG 58.384 33.333 6.67 0.00 0.00 3.95
361 362 9.943163 GAGATGCTTAAGATTTTTCCTATGTTC 57.057 33.333 6.67 0.00 0.00 3.18
362 363 9.466497 TGAGATGCTTAAGATTTTTCCTATGTT 57.534 29.630 6.67 0.00 0.00 2.71
363 364 9.466497 TTGAGATGCTTAAGATTTTTCCTATGT 57.534 29.630 6.67 0.00 0.00 2.29
366 367 9.125026 GGATTGAGATGCTTAAGATTTTTCCTA 57.875 33.333 6.67 0.00 0.00 2.94
367 368 7.838193 AGGATTGAGATGCTTAAGATTTTTCCT 59.162 33.333 6.67 4.06 28.31 3.36
368 369 8.005192 AGGATTGAGATGCTTAAGATTTTTCC 57.995 34.615 6.67 1.86 28.31 3.13
369 370 9.513727 GAAGGATTGAGATGCTTAAGATTTTTC 57.486 33.333 6.67 0.00 43.06 2.29
370 371 9.252635 AGAAGGATTGAGATGCTTAAGATTTTT 57.747 29.630 6.67 0.00 43.06 1.94
371 372 8.820153 AGAAGGATTGAGATGCTTAAGATTTT 57.180 30.769 6.67 0.00 43.06 1.82
372 373 9.911788 TTAGAAGGATTGAGATGCTTAAGATTT 57.088 29.630 6.67 0.00 43.06 2.17
373 374 9.911788 TTTAGAAGGATTGAGATGCTTAAGATT 57.088 29.630 6.67 0.00 43.06 2.40
374 375 9.336171 GTTTAGAAGGATTGAGATGCTTAAGAT 57.664 33.333 6.67 0.00 43.06 2.40
375 376 8.321353 TGTTTAGAAGGATTGAGATGCTTAAGA 58.679 33.333 6.67 0.00 43.06 2.10
376 377 8.394121 GTGTTTAGAAGGATTGAGATGCTTAAG 58.606 37.037 0.00 0.00 43.06 1.85
377 378 7.336931 GGTGTTTAGAAGGATTGAGATGCTTAA 59.663 37.037 0.00 0.00 43.06 1.85
378 379 6.823689 GGTGTTTAGAAGGATTGAGATGCTTA 59.176 38.462 0.00 0.00 43.06 3.09
379 380 5.649831 GGTGTTTAGAAGGATTGAGATGCTT 59.350 40.000 0.00 0.00 45.30 3.91
380 381 5.045286 AGGTGTTTAGAAGGATTGAGATGCT 60.045 40.000 0.00 0.00 35.18 3.79
381 382 5.189180 AGGTGTTTAGAAGGATTGAGATGC 58.811 41.667 0.00 0.00 0.00 3.91
382 383 8.206867 TCATAGGTGTTTAGAAGGATTGAGATG 58.793 37.037 0.00 0.00 0.00 2.90
383 384 8.324191 TCATAGGTGTTTAGAAGGATTGAGAT 57.676 34.615 0.00 0.00 0.00 2.75
384 385 7.733773 TCATAGGTGTTTAGAAGGATTGAGA 57.266 36.000 0.00 0.00 0.00 3.27
385 386 8.792830 TTTCATAGGTGTTTAGAAGGATTGAG 57.207 34.615 0.00 0.00 0.00 3.02
386 387 9.581289 TTTTTCATAGGTGTTTAGAAGGATTGA 57.419 29.630 0.00 0.00 0.00 2.57
409 410 7.254852 TGCTTCTACTTGATTCAAACGTTTTT 58.745 30.769 11.66 0.00 0.00 1.94
410 411 6.791303 TGCTTCTACTTGATTCAAACGTTTT 58.209 32.000 11.66 0.00 0.00 2.43
411 412 6.371809 TGCTTCTACTTGATTCAAACGTTT 57.628 33.333 7.96 7.96 0.00 3.60
412 413 6.371809 TTGCTTCTACTTGATTCAAACGTT 57.628 33.333 0.00 0.00 0.00 3.99
413 414 5.049405 CCTTGCTTCTACTTGATTCAAACGT 60.049 40.000 0.01 0.00 0.00 3.99
414 415 5.179368 TCCTTGCTTCTACTTGATTCAAACG 59.821 40.000 0.01 0.00 0.00 3.60
415 416 6.560253 TCCTTGCTTCTACTTGATTCAAAC 57.440 37.500 0.01 0.00 0.00 2.93
416 417 7.581213 TTTCCTTGCTTCTACTTGATTCAAA 57.419 32.000 0.01 0.00 0.00 2.69
417 418 7.581213 TTTTCCTTGCTTCTACTTGATTCAA 57.419 32.000 0.00 0.00 0.00 2.69
418 419 7.068103 TGTTTTTCCTTGCTTCTACTTGATTCA 59.932 33.333 0.00 0.00 0.00 2.57
419 420 7.425606 TGTTTTTCCTTGCTTCTACTTGATTC 58.574 34.615 0.00 0.00 0.00 2.52
420 421 7.346751 TGTTTTTCCTTGCTTCTACTTGATT 57.653 32.000 0.00 0.00 0.00 2.57
421 422 6.515696 GCTGTTTTTCCTTGCTTCTACTTGAT 60.516 38.462 0.00 0.00 0.00 2.57
422 423 5.221048 GCTGTTTTTCCTTGCTTCTACTTGA 60.221 40.000 0.00 0.00 0.00 3.02
423 424 4.978580 GCTGTTTTTCCTTGCTTCTACTTG 59.021 41.667 0.00 0.00 0.00 3.16
424 425 4.038042 GGCTGTTTTTCCTTGCTTCTACTT 59.962 41.667 0.00 0.00 0.00 2.24
425 426 3.570125 GGCTGTTTTTCCTTGCTTCTACT 59.430 43.478 0.00 0.00 0.00 2.57
426 427 3.570125 AGGCTGTTTTTCCTTGCTTCTAC 59.430 43.478 0.00 0.00 0.00 2.59
427 428 3.821033 GAGGCTGTTTTTCCTTGCTTCTA 59.179 43.478 0.00 0.00 31.71 2.10
428 429 2.625314 GAGGCTGTTTTTCCTTGCTTCT 59.375 45.455 0.00 0.00 31.71 2.85
429 430 2.625314 AGAGGCTGTTTTTCCTTGCTTC 59.375 45.455 0.00 0.00 31.71 3.86
430 431 2.625314 GAGAGGCTGTTTTTCCTTGCTT 59.375 45.455 0.00 0.00 31.71 3.91
431 432 2.234143 GAGAGGCTGTTTTTCCTTGCT 58.766 47.619 0.00 0.00 31.71 3.91
432 433 1.270826 GGAGAGGCTGTTTTTCCTTGC 59.729 52.381 0.00 0.00 31.71 4.01
433 434 1.537202 CGGAGAGGCTGTTTTTCCTTG 59.463 52.381 0.00 0.00 31.71 3.61
434 435 1.545651 CCGGAGAGGCTGTTTTTCCTT 60.546 52.381 0.00 0.00 31.71 3.36
435 436 0.036875 CCGGAGAGGCTGTTTTTCCT 59.963 55.000 0.00 0.00 34.90 3.36
436 437 0.036306 TCCGGAGAGGCTGTTTTTCC 59.964 55.000 0.00 0.00 40.77 3.13
437 438 1.157585 GTCCGGAGAGGCTGTTTTTC 58.842 55.000 3.06 0.00 40.77 2.29
438 439 0.250770 GGTCCGGAGAGGCTGTTTTT 60.251 55.000 3.06 0.00 40.77 1.94
439 440 1.375326 GGTCCGGAGAGGCTGTTTT 59.625 57.895 3.06 0.00 40.77 2.43
440 441 1.831652 CTGGTCCGGAGAGGCTGTTT 61.832 60.000 3.06 0.00 40.77 2.83
441 442 2.203788 TGGTCCGGAGAGGCTGTT 60.204 61.111 3.06 0.00 40.77 3.16
442 443 2.681778 CTGGTCCGGAGAGGCTGT 60.682 66.667 3.06 0.00 40.77 4.40
443 444 4.154347 GCTGGTCCGGAGAGGCTG 62.154 72.222 3.06 0.00 40.77 4.85
444 445 3.914551 AAGCTGGTCCGGAGAGGCT 62.915 63.158 3.06 11.98 40.77 4.58
445 446 3.394836 AAGCTGGTCCGGAGAGGC 61.395 66.667 3.06 9.54 40.77 4.70
446 447 1.954362 CTCAAGCTGGTCCGGAGAGG 61.954 65.000 3.06 0.00 42.97 3.69
447 448 1.254284 ACTCAAGCTGGTCCGGAGAG 61.254 60.000 3.06 8.90 0.00 3.20
448 449 0.832135 AACTCAAGCTGGTCCGGAGA 60.832 55.000 3.06 0.00 0.00 3.71
449 450 0.671781 CAACTCAAGCTGGTCCGGAG 60.672 60.000 3.06 0.00 0.00 4.63
450 451 1.371183 CAACTCAAGCTGGTCCGGA 59.629 57.895 0.00 0.00 0.00 5.14
451 452 2.328099 GCAACTCAAGCTGGTCCGG 61.328 63.158 0.00 0.00 0.00 5.14
452 453 1.302033 AGCAACTCAAGCTGGTCCG 60.302 57.895 0.00 0.00 41.61 4.79
453 454 4.809070 AGCAACTCAAGCTGGTCC 57.191 55.556 0.00 0.00 41.61 4.46
458 459 2.548920 GGTACTGACAGCAACTCAAGCT 60.549 50.000 1.25 0.00 44.62 3.74
459 460 1.801178 GGTACTGACAGCAACTCAAGC 59.199 52.381 1.25 0.00 0.00 4.01
460 461 2.224281 TGGGTACTGACAGCAACTCAAG 60.224 50.000 8.32 0.00 0.00 3.02
461 462 1.765904 TGGGTACTGACAGCAACTCAA 59.234 47.619 8.32 0.00 0.00 3.02
462 463 1.070134 GTGGGTACTGACAGCAACTCA 59.930 52.381 1.25 4.66 0.00 3.41
463 464 1.344763 AGTGGGTACTGACAGCAACTC 59.655 52.381 1.25 1.79 35.34 3.01
464 465 1.424638 AGTGGGTACTGACAGCAACT 58.575 50.000 1.25 0.00 35.34 3.16
474 475 1.768482 TGGTGGCACAGTGGGTACT 60.768 57.895 20.82 0.00 41.80 2.73
475 476 1.599797 GTGGTGGCACAGTGGGTAC 60.600 63.158 20.82 0.00 41.80 3.34
476 477 2.833227 GTGGTGGCACAGTGGGTA 59.167 61.111 20.82 0.00 41.80 3.69
477 478 4.562425 CGTGGTGGCACAGTGGGT 62.562 66.667 20.82 0.00 41.80 4.51
478 479 4.562425 ACGTGGTGGCACAGTGGG 62.562 66.667 20.82 5.95 41.80 4.61
479 480 3.279116 CACGTGGTGGCACAGTGG 61.279 66.667 20.82 7.76 41.80 4.00
488 489 2.030562 GGTCACTCCCACGTGGTG 59.969 66.667 31.80 24.91 35.63 4.17
532 534 3.259902 GAGGAATCTGTTGACGTAACCC 58.740 50.000 0.00 0.00 38.55 4.11
546 548 1.287503 CTAGGCCGCTCGAGGAATC 59.712 63.158 15.58 0.00 0.00 2.52
563 565 4.954118 TCGGGTGGTGGTGCTCCT 62.954 66.667 6.34 0.00 34.23 3.69
564 566 3.682292 GATCGGGTGGTGGTGCTCC 62.682 68.421 0.00 0.00 0.00 4.70
565 567 2.125106 GATCGGGTGGTGGTGCTC 60.125 66.667 0.00 0.00 0.00 4.26
604 662 6.458232 ACGAATTATTAGTCAGCTGAGAGT 57.542 37.500 18.89 7.56 0.00 3.24
621 679 1.127951 CCTTAGACGCGCAAACGAATT 59.872 47.619 5.73 0.00 43.93 2.17
641 699 1.876664 GGCTTTTTCGAGACAGGGC 59.123 57.895 0.00 0.00 0.00 5.19
643 701 1.227999 TGCGGCTTTTTCGAGACAGG 61.228 55.000 0.00 0.00 0.00 4.00
644 702 0.586319 TTGCGGCTTTTTCGAGACAG 59.414 50.000 0.00 0.00 0.00 3.51
645 703 1.018148 TTTGCGGCTTTTTCGAGACA 58.982 45.000 0.00 0.00 0.00 3.41
646 704 2.044135 CTTTTGCGGCTTTTTCGAGAC 58.956 47.619 0.00 0.00 0.00 3.36
647 705 1.599419 GCTTTTGCGGCTTTTTCGAGA 60.599 47.619 0.00 0.00 34.86 4.04
648 706 0.778223 GCTTTTGCGGCTTTTTCGAG 59.222 50.000 0.00 0.00 34.86 4.04
649 707 2.880091 GCTTTTGCGGCTTTTTCGA 58.120 47.368 0.00 0.00 34.86 3.71
661 719 4.943142 TTGGTTTTTGCTTCTGCTTTTG 57.057 36.364 0.00 0.00 40.48 2.44
662 720 4.759183 TGTTTGGTTTTTGCTTCTGCTTTT 59.241 33.333 0.00 0.00 40.48 2.27
663 721 4.322567 TGTTTGGTTTTTGCTTCTGCTTT 58.677 34.783 0.00 0.00 40.48 3.51
664 722 3.936564 TGTTTGGTTTTTGCTTCTGCTT 58.063 36.364 0.00 0.00 40.48 3.91
665 723 3.608316 TGTTTGGTTTTTGCTTCTGCT 57.392 38.095 0.00 0.00 40.48 4.24
666 724 4.083590 TGTTTGTTTGGTTTTTGCTTCTGC 60.084 37.500 0.00 0.00 40.20 4.26
667 725 5.390779 CCTGTTTGTTTGGTTTTTGCTTCTG 60.391 40.000 0.00 0.00 0.00 3.02
668 726 4.694982 CCTGTTTGTTTGGTTTTTGCTTCT 59.305 37.500 0.00 0.00 0.00 2.85
669 727 4.142708 CCCTGTTTGTTTGGTTTTTGCTTC 60.143 41.667 0.00 0.00 0.00 3.86
670 728 3.755905 CCCTGTTTGTTTGGTTTTTGCTT 59.244 39.130 0.00 0.00 0.00 3.91
671 729 3.342719 CCCTGTTTGTTTGGTTTTTGCT 58.657 40.909 0.00 0.00 0.00 3.91
672 730 2.159448 GCCCTGTTTGTTTGGTTTTTGC 60.159 45.455 0.00 0.00 0.00 3.68
673 731 2.421775 GGCCCTGTTTGTTTGGTTTTTG 59.578 45.455 0.00 0.00 0.00 2.44
674 732 2.307392 AGGCCCTGTTTGTTTGGTTTTT 59.693 40.909 0.00 0.00 0.00 1.94
675 733 1.912731 AGGCCCTGTTTGTTTGGTTTT 59.087 42.857 0.00 0.00 0.00 2.43
676 734 1.578897 AGGCCCTGTTTGTTTGGTTT 58.421 45.000 0.00 0.00 0.00 3.27
677 735 2.463047 TAGGCCCTGTTTGTTTGGTT 57.537 45.000 0.00 0.00 0.00 3.67
678 736 2.091555 TCTTAGGCCCTGTTTGTTTGGT 60.092 45.455 0.00 0.00 0.00 3.67
679 737 2.593026 TCTTAGGCCCTGTTTGTTTGG 58.407 47.619 0.00 0.00 0.00 3.28
680 738 4.871933 AATCTTAGGCCCTGTTTGTTTG 57.128 40.909 0.00 0.00 0.00 2.93
681 739 4.503123 GCAAATCTTAGGCCCTGTTTGTTT 60.503 41.667 0.00 0.00 0.00 2.83
682 740 3.006859 GCAAATCTTAGGCCCTGTTTGTT 59.993 43.478 0.00 0.00 0.00 2.83
683 741 2.562738 GCAAATCTTAGGCCCTGTTTGT 59.437 45.455 0.00 0.00 0.00 2.83
684 742 2.827921 AGCAAATCTTAGGCCCTGTTTG 59.172 45.455 0.00 5.75 0.00 2.93
685 743 3.175438 AGCAAATCTTAGGCCCTGTTT 57.825 42.857 0.00 0.00 0.00 2.83
686 744 2.907458 AGCAAATCTTAGGCCCTGTT 57.093 45.000 0.00 0.00 0.00 3.16
687 745 3.181439 GGATAGCAAATCTTAGGCCCTGT 60.181 47.826 0.00 0.00 0.00 4.00
688 746 3.181440 TGGATAGCAAATCTTAGGCCCTG 60.181 47.826 0.00 0.00 0.00 4.45
689 747 3.056080 TGGATAGCAAATCTTAGGCCCT 58.944 45.455 0.00 0.00 0.00 5.19
690 748 3.508845 TGGATAGCAAATCTTAGGCCC 57.491 47.619 0.00 0.00 0.00 5.80
691 749 4.207165 TGTTGGATAGCAAATCTTAGGCC 58.793 43.478 0.00 0.00 0.00 5.19
692 750 5.532406 TGATGTTGGATAGCAAATCTTAGGC 59.468 40.000 0.00 0.00 0.00 3.93
693 751 6.769822 ACTGATGTTGGATAGCAAATCTTAGG 59.230 38.462 0.00 0.00 0.00 2.69
694 752 7.798596 ACTGATGTTGGATAGCAAATCTTAG 57.201 36.000 0.00 0.00 0.00 2.18
695 753 7.283127 GGAACTGATGTTGGATAGCAAATCTTA 59.717 37.037 0.00 0.00 36.39 2.10
696 754 6.096001 GGAACTGATGTTGGATAGCAAATCTT 59.904 38.462 0.00 0.00 36.39 2.40
697 755 5.591877 GGAACTGATGTTGGATAGCAAATCT 59.408 40.000 0.00 0.00 36.39 2.40
698 756 5.357878 TGGAACTGATGTTGGATAGCAAATC 59.642 40.000 0.00 0.00 36.39 2.17
699 757 5.263599 TGGAACTGATGTTGGATAGCAAAT 58.736 37.500 0.00 0.00 36.39 2.32
700 758 4.661222 TGGAACTGATGTTGGATAGCAAA 58.339 39.130 0.00 0.00 36.39 3.68
723 781 1.209747 ACCGGAAATAGTTCTGAGGCC 59.790 52.381 9.46 0.00 41.99 5.19
751 830 3.541093 CTTTGCTTGCCGCGCAGAA 62.541 57.895 8.75 0.00 40.61 3.02
752 831 4.029186 CTTTGCTTGCCGCGCAGA 62.029 61.111 8.75 0.00 40.61 4.26
787 891 3.684788 TCGTACGTAGGAGTACTGGTTTC 59.315 47.826 16.05 0.00 43.42 2.78
799 903 0.179121 TGCTTGGCATCGTACGTAGG 60.179 55.000 16.05 8.97 31.71 3.18
818 922 1.840737 AGGAGTAGACATCTGCGTGT 58.159 50.000 0.00 0.00 33.62 4.49
823 927 1.264557 CGCGGTAGGAGTAGACATCTG 59.735 57.143 0.00 0.00 0.00 2.90
827 931 1.028330 CCACGCGGTAGGAGTAGACA 61.028 60.000 12.47 0.00 0.00 3.41
852 956 3.241995 CGTCAGCTGGTTAACTATTTCGC 60.242 47.826 15.13 0.00 0.00 4.70
884 1242 1.524849 GGCTTGGGATCGGAGAAGC 60.525 63.158 0.00 0.00 43.58 3.86
885 1243 1.414158 TAGGCTTGGGATCGGAGAAG 58.586 55.000 0.00 0.00 43.58 2.85
936 1295 3.082548 GGCTACGCTGGTGAGATAGATA 58.917 50.000 0.00 0.00 0.00 1.98
952 1311 3.251972 GCAAATGGAGCTTCTATGGCTAC 59.748 47.826 0.00 0.00 40.40 3.58
953 1312 3.117926 TGCAAATGGAGCTTCTATGGCTA 60.118 43.478 0.00 0.00 40.40 3.93
961 1320 2.230750 AGCTTTCTGCAAATGGAGCTTC 59.769 45.455 0.00 0.00 45.94 3.86
972 1331 2.816087 GACTTGGATTGAGCTTTCTGCA 59.184 45.455 0.00 0.00 45.94 4.41
1122 1481 2.184020 CTGACTTGTCCGCCCCATCA 62.184 60.000 0.00 0.00 0.00 3.07
1151 1510 1.472552 GGGCCTTGCGTTTCTTTTTGT 60.473 47.619 0.84 0.00 0.00 2.83
1183 1542 1.281656 CTCCACCGCCGAAAACAAC 59.718 57.895 0.00 0.00 0.00 3.32
1194 1553 0.249657 GATCTTAGCAGCCTCCACCG 60.250 60.000 0.00 0.00 0.00 4.94
1224 1594 1.215647 GTCCGCACTCGTGAAGGAT 59.784 57.895 14.57 0.00 39.67 3.24
1236 1606 1.985662 ATAGTTGTCCGGGTCCGCA 60.986 57.895 0.00 0.00 38.24 5.69
1238 1608 0.750850 ATCATAGTTGTCCGGGTCCG 59.249 55.000 0.00 1.86 39.44 4.79
1239 1609 3.802675 GCTTATCATAGTTGTCCGGGTCC 60.803 52.174 0.00 0.00 0.00 4.46
1240 1610 3.069729 AGCTTATCATAGTTGTCCGGGTC 59.930 47.826 0.00 0.00 0.00 4.46
1241 1611 3.039011 AGCTTATCATAGTTGTCCGGGT 58.961 45.455 0.00 0.00 0.00 5.28
1242 1612 3.322254 AGAGCTTATCATAGTTGTCCGGG 59.678 47.826 0.00 0.00 0.00 5.73
1243 1613 4.592485 AGAGCTTATCATAGTTGTCCGG 57.408 45.455 0.00 0.00 0.00 5.14
1244 1614 8.594881 ATTAAAGAGCTTATCATAGTTGTCCG 57.405 34.615 0.00 0.00 0.00 4.79
1338 1711 4.402474 AGGCATTAAATTTCCTAGGCACAC 59.598 41.667 2.96 0.00 0.00 3.82
1347 1720 4.157840 ACCGAGAACAGGCATTAAATTTCC 59.842 41.667 0.00 0.00 0.00 3.13
1348 1721 5.310720 ACCGAGAACAGGCATTAAATTTC 57.689 39.130 0.00 0.00 0.00 2.17
1406 2847 2.356818 CTTGTTGCCCCCGCGAAAAA 62.357 55.000 8.23 0.00 38.08 1.94
1408 2849 2.677765 TACTTGTTGCCCCCGCGAAA 62.678 55.000 8.23 0.00 38.08 3.46
1409 2850 2.472414 ATACTTGTTGCCCCCGCGAA 62.472 55.000 8.23 0.00 38.08 4.70
1411 2852 0.534203 ATATACTTGTTGCCCCCGCG 60.534 55.000 0.00 0.00 38.08 6.46
1412 2853 1.336755 CAATATACTTGTTGCCCCCGC 59.663 52.381 0.00 0.00 0.00 6.13
1413 2854 2.650322 ACAATATACTTGTTGCCCCCG 58.350 47.619 0.00 0.00 0.00 5.73
1414 2855 5.414789 AAAACAATATACTTGTTGCCCCC 57.585 39.130 11.53 0.00 41.30 5.40
1415 2856 7.033185 CAGTAAAACAATATACTTGTTGCCCC 58.967 38.462 11.53 4.45 41.30 5.80
1416 2857 7.822658 TCAGTAAAACAATATACTTGTTGCCC 58.177 34.615 11.53 5.58 41.30 5.36
1483 2939 5.864474 CGTCGAGAGAAATAAGATAATGGGG 59.136 44.000 0.00 0.00 45.01 4.96
1504 2960 2.736721 ACACATGAGTACAATGTGCGTC 59.263 45.455 28.18 4.95 46.86 5.19
1507 2963 8.397906 ACAATTATACACATGAGTACAATGTGC 58.602 33.333 28.18 0.00 46.86 4.57
1543 2999 4.945543 TGCACCTTCGAGATACTAAGTACA 59.054 41.667 0.00 0.00 0.00 2.90
1544 3000 5.066246 AGTGCACCTTCGAGATACTAAGTAC 59.934 44.000 14.63 0.00 0.00 2.73
1545 3001 5.191426 AGTGCACCTTCGAGATACTAAGTA 58.809 41.667 14.63 0.00 0.00 2.24
1546 3002 4.017808 AGTGCACCTTCGAGATACTAAGT 58.982 43.478 14.63 0.00 0.00 2.24
1549 3388 3.617284 TGAGTGCACCTTCGAGATACTA 58.383 45.455 14.63 0.00 0.00 1.82
1565 3404 3.495100 GGCACACCCTAATCCTATGAGTG 60.495 52.174 0.00 0.00 0.00 3.51
1566 3405 2.706190 GGCACACCCTAATCCTATGAGT 59.294 50.000 0.00 0.00 0.00 3.41
1575 3414 1.005805 TGAATGCAGGCACACCCTAAT 59.994 47.619 0.00 0.00 44.09 1.73
1587 3426 3.548770 ACACTCACCCATATGAATGCAG 58.451 45.455 3.65 4.68 28.78 4.41
1642 3809 7.414762 GCACGTTGAGGTGGTATGTTTATATTT 60.415 37.037 6.04 0.00 38.36 1.40
1646 3813 3.687698 GCACGTTGAGGTGGTATGTTTAT 59.312 43.478 6.04 0.00 38.36 1.40
1665 3844 1.827969 ACTCCCTCTGTATGTCTGCAC 59.172 52.381 0.00 0.00 0.00 4.57
1670 3849 5.916661 TTTCAGTACTCCCTCTGTATGTC 57.083 43.478 0.00 0.00 33.89 3.06
1852 4031 1.873486 GCTGTGGGATTTGGTTGCAAC 60.873 52.381 21.59 21.59 0.00 4.17
1864 4043 1.152984 CCAGTGTGTTGCTGTGGGA 60.153 57.895 0.00 0.00 32.41 4.37
1872 4051 0.817013 ACAAGCAACCCAGTGTGTTG 59.183 50.000 13.47 13.47 44.60 3.33
1876 4055 1.064758 TCAGAACAAGCAACCCAGTGT 60.065 47.619 0.00 0.00 0.00 3.55
1897 4076 2.040947 TGGTCAATGCATTGGTACCTCA 59.959 45.455 33.35 21.05 36.29 3.86
1901 4080 4.519540 ACTTTGGTCAATGCATTGGTAC 57.480 40.909 33.22 25.45 38.30 3.34
1914 4093 6.806739 GCAGACAATTGGTATAAACTTTGGTC 59.193 38.462 10.83 0.00 0.00 4.02
1933 4112 8.510243 AGATATGAATACAAAATGTGCAGACA 57.490 30.769 0.00 0.00 36.22 3.41
1937 4116 7.040478 GCCCTAGATATGAATACAAAATGTGCA 60.040 37.037 0.00 0.00 0.00 4.57
1978 4158 2.742053 TGCCTTGTTATCGAAGAAGTGC 59.258 45.455 0.00 0.00 43.58 4.40
1986 4166 3.838244 ATAGCCTTGCCTTGTTATCGA 57.162 42.857 0.00 0.00 0.00 3.59
1987 4167 5.758296 TCTTTATAGCCTTGCCTTGTTATCG 59.242 40.000 0.00 0.00 0.00 2.92
1992 4172 5.179452 TCTTCTTTATAGCCTTGCCTTGT 57.821 39.130 0.00 0.00 0.00 3.16
1993 4173 6.071952 TGTTTCTTCTTTATAGCCTTGCCTTG 60.072 38.462 0.00 0.00 0.00 3.61
2055 4248 5.536497 AGTTCCCCCAATACATTCTTTCT 57.464 39.130 0.00 0.00 0.00 2.52
2064 4257 8.700439 TTATAAAGCATTAGTTCCCCCAATAC 57.300 34.615 0.00 0.00 0.00 1.89
2066 4259 8.797436 ATTTATAAAGCATTAGTTCCCCCAAT 57.203 30.769 3.94 0.00 0.00 3.16
2069 4262 9.309224 ACATATTTATAAAGCATTAGTTCCCCC 57.691 33.333 3.94 0.00 0.00 5.40
2143 4336 4.104696 TCGTCACTAATTCAGCGATGAA 57.895 40.909 19.60 19.60 30.16 2.57
2149 4342 7.648112 TGATGTATACTTCGTCACTAATTCAGC 59.352 37.037 12.61 0.00 0.00 4.26
2150 4343 9.516314 TTGATGTATACTTCGTCACTAATTCAG 57.484 33.333 12.61 0.00 31.71 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.