Multiple sequence alignment - TraesCS2A01G503900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G503900 chr2A 100.000 4754 0 0 1 4754 733086802 733091555 0.000000e+00 8780.0
1 TraesCS2A01G503900 chr2D 94.757 3605 140 15 282 3852 598813354 598816943 0.000000e+00 5565.0
2 TraesCS2A01G503900 chr2D 96.127 284 11 0 1 284 598813012 598813295 9.320000e-127 464.0
3 TraesCS2A01G503900 chr2B 94.621 3551 140 17 282 3801 727685322 727688852 0.000000e+00 5452.0
4 TraesCS2A01G503900 chr2B 93.885 278 16 1 1 278 727684981 727685257 7.360000e-113 418.0
5 TraesCS2A01G503900 chr2B 75.560 491 64 24 4199 4636 727688925 727689412 1.750000e-44 191.0
6 TraesCS2A01G503900 chr7D 84.590 3394 452 51 552 3917 89533454 89530104 0.000000e+00 3304.0
7 TraesCS2A01G503900 chr7D 84.181 3205 461 36 651 3840 555196709 555193536 0.000000e+00 3068.0
8 TraesCS2A01G503900 chr7D 84.524 3108 438 22 681 3761 20460110 20463201 0.000000e+00 3035.0
9 TraesCS2A01G503900 chr7D 86.108 2829 377 14 963 3785 20404290 20407108 0.000000e+00 3033.0
10 TraesCS2A01G503900 chr7D 85.759 2879 390 16 893 3761 20947062 20949930 0.000000e+00 3027.0
11 TraesCS2A01G503900 chr7D 78.455 246 42 10 282 519 20574420 20574662 2.960000e-32 150.0
12 TraesCS2A01G503900 chr7D 81.022 137 14 8 4291 4420 20081419 20081550 1.090000e-16 99.0
13 TraesCS2A01G503900 chr7A 85.483 2907 402 18 890 3788 20659563 20662457 0.000000e+00 3013.0
14 TraesCS2A01G503900 chr7A 81.040 3539 559 79 412 3900 20600468 20603944 0.000000e+00 2715.0
15 TraesCS2A01G503900 chr7A 91.111 45 4 0 412 456 20977890 20977934 1.430000e-05 62.1
16 TraesCS2A01G503900 chr7B 84.082 3160 449 38 710 3840 601114187 601117321 0.000000e+00 3000.0
17 TraesCS2A01G503900 chr7B 82.906 117 18 2 393 508 601113112 601113227 2.340000e-18 104.0
18 TraesCS2A01G503900 chr3A 85.638 752 60 11 285 997 308689568 308690310 0.000000e+00 747.0
19 TraesCS2A01G503900 chr3A 94.043 235 14 0 50 284 308689274 308689508 1.630000e-94 357.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G503900 chr2A 733086802 733091555 4753 False 8780.000000 8780 100.0000 1 4754 1 chr2A.!!$F1 4753
1 TraesCS2A01G503900 chr2D 598813012 598816943 3931 False 3014.500000 5565 95.4420 1 3852 2 chr2D.!!$F1 3851
2 TraesCS2A01G503900 chr2B 727684981 727689412 4431 False 2020.333333 5452 88.0220 1 4636 3 chr2B.!!$F1 4635
3 TraesCS2A01G503900 chr7D 89530104 89533454 3350 True 3304.000000 3304 84.5900 552 3917 1 chr7D.!!$R1 3365
4 TraesCS2A01G503900 chr7D 555193536 555196709 3173 True 3068.000000 3068 84.1810 651 3840 1 chr7D.!!$R2 3189
5 TraesCS2A01G503900 chr7D 20460110 20463201 3091 False 3035.000000 3035 84.5240 681 3761 1 chr7D.!!$F3 3080
6 TraesCS2A01G503900 chr7D 20404290 20407108 2818 False 3033.000000 3033 86.1080 963 3785 1 chr7D.!!$F2 2822
7 TraesCS2A01G503900 chr7D 20947062 20949930 2868 False 3027.000000 3027 85.7590 893 3761 1 chr7D.!!$F5 2868
8 TraesCS2A01G503900 chr7A 20659563 20662457 2894 False 3013.000000 3013 85.4830 890 3788 1 chr7A.!!$F2 2898
9 TraesCS2A01G503900 chr7A 20600468 20603944 3476 False 2715.000000 2715 81.0400 412 3900 1 chr7A.!!$F1 3488
10 TraesCS2A01G503900 chr7B 601113112 601117321 4209 False 1552.000000 3000 83.4940 393 3840 2 chr7B.!!$F1 3447
11 TraesCS2A01G503900 chr3A 308689274 308690310 1036 False 552.000000 747 89.8405 50 997 2 chr3A.!!$F1 947

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
521 599 0.528470 AGTTACTCGGAGCTGTCTGC 59.472 55.000 4.58 0.0 43.29 4.26 F
739 1586 1.071699 GGACCTGCCTGTTGTCAGTTA 59.928 52.381 0.00 0.0 39.82 2.24 F
983 1880 3.497763 CCCACCCAACAGTGAGACATTAA 60.498 47.826 0.00 0.0 40.34 1.40 F
3302 4214 1.071814 GGCTACGTTTGGGTGGACA 59.928 57.895 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1922 2827 1.093159 CATCAGTCTGCTGCCCTTTC 58.907 55.000 0.00 0.0 42.29 2.62 R
2607 3513 3.064820 GCAATACCAATCGACGTCCATTT 59.935 43.478 10.58 0.0 0.00 2.32 R
3656 4572 5.630121 TGGTGATTTCAAAGAAGCCTAGAA 58.370 37.500 0.00 0.0 0.00 2.10 R
4652 5634 0.106318 GGCCTCATCAATTGCCTCCT 60.106 55.000 0.00 0.0 40.77 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
163 164 2.191641 GTGAGCTGCTCCATCCCC 59.808 66.667 25.61 1.14 0.00 4.81
310 372 4.860907 GCACATGACAGCTCCTTTTAATTG 59.139 41.667 0.00 0.00 0.00 2.32
315 377 6.560253 TGACAGCTCCTTTTAATTGAAGTC 57.440 37.500 0.00 0.00 0.00 3.01
386 461 3.118811 CCTCTAGTCCTCTTTGCTTCCTG 60.119 52.174 0.00 0.00 0.00 3.86
400 475 8.299570 TCTTTGCTTCCTGATTTATTTCTTGAC 58.700 33.333 0.00 0.00 0.00 3.18
425 501 7.394359 ACTGTGATACATTTTCTTGTGGCTTAT 59.606 33.333 0.00 0.00 0.00 1.73
521 599 0.528470 AGTTACTCGGAGCTGTCTGC 59.472 55.000 4.58 0.00 43.29 4.26
534 612 3.911868 GCTGTCTGCTATGTCAGATAGG 58.088 50.000 17.80 7.59 46.15 2.57
545 623 2.168521 TGTCAGATAGGCTCCCTTTTCG 59.831 50.000 0.00 0.00 34.61 3.46
565 668 9.503427 CTTTTCGTCTCACTTGTTTAAATCTTT 57.497 29.630 0.00 0.00 0.00 2.52
648 1488 6.046593 CACTTAGTTGGTTGAGTGTCACTTA 58.953 40.000 7.00 0.00 35.84 2.24
697 1544 2.739932 GCCATTGACGATAGCACAGTCT 60.740 50.000 0.00 0.00 42.67 3.24
708 1555 6.073765 ACGATAGCACAGTCTTAAGTGTTTTG 60.074 38.462 1.63 0.00 35.84 2.44
718 1565 7.435192 CAGTCTTAAGTGTTTTGAAATTCCCAC 59.565 37.037 1.63 0.00 0.00 4.61
734 1581 1.961277 CACGGACCTGCCTGTTGTC 60.961 63.158 0.00 0.00 0.00 3.18
739 1586 1.071699 GGACCTGCCTGTTGTCAGTTA 59.928 52.381 0.00 0.00 39.82 2.24
823 1674 8.622157 GTTTAGGAGGATTATACTTTGAAAGGC 58.378 37.037 10.02 0.00 0.00 4.35
825 1676 6.360618 AGGAGGATTATACTTTGAAAGGCTG 58.639 40.000 10.02 0.00 0.00 4.85
840 1705 4.510038 AAGGCTGTGCTTATTTCACTTG 57.490 40.909 0.00 0.00 35.58 3.16
935 1831 8.243426 TCATTTTGCAGTGGTCATTCTAATAAC 58.757 33.333 0.00 0.00 0.00 1.89
958 1855 5.817816 ACACTGAGGCAAATATACAACTAGC 59.182 40.000 0.00 0.00 0.00 3.42
983 1880 3.497763 CCCACCCAACAGTGAGACATTAA 60.498 47.826 0.00 0.00 40.34 1.40
984 1881 3.753272 CCACCCAACAGTGAGACATTAAG 59.247 47.826 0.00 0.00 40.34 1.85
1122 2021 4.290942 AGCAAATACTAGAGCTACAGGGT 58.709 43.478 0.00 0.00 35.19 4.34
1172 2071 6.741992 TCGAGTAATGCATGATGTTCTTTT 57.258 33.333 0.00 0.00 0.00 2.27
1351 2250 6.863275 GGGTTTACAAAACCAAGATATCTGG 58.137 40.000 20.08 12.09 45.28 3.86
1456 2355 6.275335 GTTCACATGATAAACAATGGGGATG 58.725 40.000 0.00 0.00 0.00 3.51
2052 2957 6.127869 GGGATCTCTTTTGTAGAAAAGCCTTC 60.128 42.308 17.90 13.37 45.34 3.46
2342 3247 7.978982 TGCAGCTTATTTTCAGAAGACTATTC 58.021 34.615 0.00 0.00 0.00 1.75
3302 4214 1.071814 GGCTACGTTTGGGTGGACA 59.928 57.895 0.00 0.00 0.00 4.02
3564 4480 1.414181 TGGCTAGAGATACAGCAAGGC 59.586 52.381 0.00 0.00 39.63 4.35
3656 4572 0.846427 TTCCTCATGCCCCTCCAGTT 60.846 55.000 0.00 0.00 0.00 3.16
3713 4629 2.821969 GGTTGCTGGATCAATGTTCTGT 59.178 45.455 0.00 0.00 0.00 3.41
3715 4631 4.095483 GGTTGCTGGATCAATGTTCTGTAG 59.905 45.833 0.00 0.00 0.00 2.74
3761 4677 0.467384 CTCCGAGATTGACCTGCCAT 59.533 55.000 0.00 0.00 0.00 4.40
3762 4678 1.688735 CTCCGAGATTGACCTGCCATA 59.311 52.381 0.00 0.00 0.00 2.74
3763 4679 1.412710 TCCGAGATTGACCTGCCATAC 59.587 52.381 0.00 0.00 0.00 2.39
3764 4680 1.414181 CCGAGATTGACCTGCCATACT 59.586 52.381 0.00 0.00 0.00 2.12
3765 4681 2.477825 CGAGATTGACCTGCCATACTG 58.522 52.381 0.00 0.00 0.00 2.74
3766 4682 2.159043 CGAGATTGACCTGCCATACTGT 60.159 50.000 0.00 0.00 0.00 3.55
3801 4718 1.860950 GTGTATGCACGCAGAGGTATG 59.139 52.381 0.00 0.00 35.75 2.39
3818 4735 0.921896 ATGGCCACTCACCTGCTAAT 59.078 50.000 8.16 0.00 0.00 1.73
3819 4743 0.035152 TGGCCACTCACCTGCTAATG 60.035 55.000 0.00 0.00 0.00 1.90
3855 4779 3.997021 GCTTCCTTTCTCGTCTCAATTCA 59.003 43.478 0.00 0.00 0.00 2.57
3859 4783 7.011857 GCTTCCTTTCTCGTCTCAATTCATAAT 59.988 37.037 0.00 0.00 0.00 1.28
3907 4838 3.585289 TGTTGGTTATACAGGCTGGAAGA 59.415 43.478 20.34 0.00 34.07 2.87
3917 4848 2.824341 CAGGCTGGAAGAAAGATGCTTT 59.176 45.455 6.61 0.00 34.07 3.51
3918 4849 2.824341 AGGCTGGAAGAAAGATGCTTTG 59.176 45.455 0.00 0.00 34.07 2.77
3919 4850 2.603953 GCTGGAAGAAAGATGCTTTGC 58.396 47.619 0.00 0.00 34.07 3.68
3920 4851 2.029649 GCTGGAAGAAAGATGCTTTGCA 60.030 45.455 0.00 0.00 38.95 4.08
3921 4852 3.834610 CTGGAAGAAAGATGCTTTGCAG 58.165 45.455 0.00 0.00 38.08 4.41
3922 4853 3.489355 TGGAAGAAAGATGCTTTGCAGA 58.511 40.909 0.00 0.00 43.65 4.26
3923 4854 4.084287 TGGAAGAAAGATGCTTTGCAGAT 58.916 39.130 0.00 0.00 43.65 2.90
3924 4855 4.157289 TGGAAGAAAGATGCTTTGCAGATC 59.843 41.667 0.00 0.00 43.65 2.75
3925 4856 4.157289 GGAAGAAAGATGCTTTGCAGATCA 59.843 41.667 0.00 0.00 43.65 2.92
3926 4857 5.336213 GGAAGAAAGATGCTTTGCAGATCAA 60.336 40.000 0.00 0.00 43.65 2.57
3927 4858 5.312120 AGAAAGATGCTTTGCAGATCAAG 57.688 39.130 0.00 0.00 43.65 3.02
3928 4859 4.158025 AGAAAGATGCTTTGCAGATCAAGG 59.842 41.667 0.00 0.00 43.65 3.61
3929 4860 3.361281 AGATGCTTTGCAGATCAAGGA 57.639 42.857 0.00 0.00 43.65 3.36
3930 4861 3.693807 AGATGCTTTGCAGATCAAGGAA 58.306 40.909 0.00 0.00 43.65 3.36
3931 4862 4.084287 AGATGCTTTGCAGATCAAGGAAA 58.916 39.130 0.00 0.01 43.65 3.13
3932 4863 4.525487 AGATGCTTTGCAGATCAAGGAAAA 59.475 37.500 0.00 0.00 43.65 2.29
3933 4864 4.247267 TGCTTTGCAGATCAAGGAAAAG 57.753 40.909 0.00 2.00 34.03 2.27
3934 4865 3.006110 TGCTTTGCAGATCAAGGAAAAGG 59.994 43.478 12.01 2.60 34.03 3.11
3935 4866 3.615834 GCTTTGCAGATCAAGGAAAAGGG 60.616 47.826 12.01 2.08 34.03 3.95
3936 4867 3.524095 TTGCAGATCAAGGAAAAGGGA 57.476 42.857 0.00 0.00 0.00 4.20
3937 4868 2.795329 TGCAGATCAAGGAAAAGGGAC 58.205 47.619 0.00 0.00 0.00 4.46
3938 4869 1.740025 GCAGATCAAGGAAAAGGGACG 59.260 52.381 0.00 0.00 0.00 4.79
3939 4870 2.615493 GCAGATCAAGGAAAAGGGACGA 60.615 50.000 0.00 0.00 0.00 4.20
3940 4871 3.878778 CAGATCAAGGAAAAGGGACGAT 58.121 45.455 0.00 0.00 0.00 3.73
3941 4872 3.873952 CAGATCAAGGAAAAGGGACGATC 59.126 47.826 0.00 0.00 0.00 3.69
3942 4873 3.777522 AGATCAAGGAAAAGGGACGATCT 59.222 43.478 0.00 0.00 34.70 2.75
3943 4874 3.334583 TCAAGGAAAAGGGACGATCTG 57.665 47.619 0.00 0.00 0.00 2.90
3944 4875 2.903784 TCAAGGAAAAGGGACGATCTGA 59.096 45.455 0.00 0.00 0.00 3.27
3945 4876 3.519510 TCAAGGAAAAGGGACGATCTGAT 59.480 43.478 0.00 0.00 0.00 2.90
3946 4877 4.019321 TCAAGGAAAAGGGACGATCTGATT 60.019 41.667 0.00 0.00 0.00 2.57
3947 4878 4.143986 AGGAAAAGGGACGATCTGATTC 57.856 45.455 0.00 0.00 0.00 2.52
3948 4879 3.118223 AGGAAAAGGGACGATCTGATTCC 60.118 47.826 0.00 0.53 34.18 3.01
3949 4880 3.370527 GGAAAAGGGACGATCTGATTCCA 60.371 47.826 9.88 0.00 34.16 3.53
3950 4881 3.550437 AAAGGGACGATCTGATTCCAG 57.450 47.619 9.88 0.00 41.74 3.86
3951 4882 2.166907 AGGGACGATCTGATTCCAGT 57.833 50.000 9.88 0.97 41.16 4.00
3952 4883 1.759445 AGGGACGATCTGATTCCAGTG 59.241 52.381 9.88 0.00 41.16 3.66
3953 4884 1.482593 GGGACGATCTGATTCCAGTGT 59.517 52.381 9.88 0.00 41.16 3.55
3954 4885 2.093447 GGGACGATCTGATTCCAGTGTT 60.093 50.000 9.88 0.00 41.16 3.32
3955 4886 3.132289 GGGACGATCTGATTCCAGTGTTA 59.868 47.826 9.88 0.00 41.16 2.41
3956 4887 4.363999 GGACGATCTGATTCCAGTGTTAG 58.636 47.826 3.93 0.00 41.16 2.34
3957 4888 4.142138 GGACGATCTGATTCCAGTGTTAGT 60.142 45.833 3.93 0.00 41.16 2.24
3958 4889 5.067413 GGACGATCTGATTCCAGTGTTAGTA 59.933 44.000 3.93 0.00 41.16 1.82
3959 4890 6.239064 GGACGATCTGATTCCAGTGTTAGTAT 60.239 42.308 3.93 0.00 41.16 2.12
3960 4891 7.040617 GGACGATCTGATTCCAGTGTTAGTATA 60.041 40.741 3.93 0.00 41.16 1.47
3961 4892 8.410673 ACGATCTGATTCCAGTGTTAGTATAT 57.589 34.615 0.00 0.00 41.16 0.86
3962 4893 8.300286 ACGATCTGATTCCAGTGTTAGTATATG 58.700 37.037 0.00 0.00 41.16 1.78
3963 4894 8.300286 CGATCTGATTCCAGTGTTAGTATATGT 58.700 37.037 0.00 0.00 41.16 2.29
3964 4895 9.988815 GATCTGATTCCAGTGTTAGTATATGTT 57.011 33.333 0.00 0.00 41.16 2.71
3965 4896 9.988815 ATCTGATTCCAGTGTTAGTATATGTTC 57.011 33.333 0.00 0.00 41.16 3.18
3966 4897 8.135529 TCTGATTCCAGTGTTAGTATATGTTCG 58.864 37.037 0.00 0.00 41.16 3.95
3967 4898 7.778083 TGATTCCAGTGTTAGTATATGTTCGT 58.222 34.615 0.00 0.00 0.00 3.85
3968 4899 7.704899 TGATTCCAGTGTTAGTATATGTTCGTG 59.295 37.037 0.00 0.00 0.00 4.35
3969 4900 5.345702 TCCAGTGTTAGTATATGTTCGTGC 58.654 41.667 0.00 0.00 0.00 5.34
3970 4901 4.506654 CCAGTGTTAGTATATGTTCGTGCC 59.493 45.833 0.00 0.00 0.00 5.01
3971 4902 4.206404 CAGTGTTAGTATATGTTCGTGCCG 59.794 45.833 0.00 0.00 0.00 5.69
3972 4903 3.060740 GTGTTAGTATATGTTCGTGCCGC 60.061 47.826 0.00 0.00 0.00 6.53
3973 4904 3.181484 TGTTAGTATATGTTCGTGCCGCT 60.181 43.478 0.00 0.00 0.00 5.52
3974 4905 1.852942 AGTATATGTTCGTGCCGCTG 58.147 50.000 0.00 0.00 0.00 5.18
3975 4906 0.232303 GTATATGTTCGTGCCGCTGC 59.768 55.000 0.00 0.00 38.26 5.25
3976 4907 0.104120 TATATGTTCGTGCCGCTGCT 59.896 50.000 0.70 0.00 38.71 4.24
3977 4908 1.431488 ATATGTTCGTGCCGCTGCTG 61.431 55.000 0.70 0.00 38.71 4.41
3978 4909 2.499756 TATGTTCGTGCCGCTGCTGA 62.500 55.000 0.70 0.00 38.71 4.26
3979 4910 3.345808 GTTCGTGCCGCTGCTGAA 61.346 61.111 0.70 3.10 38.71 3.02
3980 4911 2.358615 TTCGTGCCGCTGCTGAAT 60.359 55.556 0.70 0.00 38.71 2.57
3981 4912 1.079474 TTCGTGCCGCTGCTGAATA 60.079 52.632 0.70 0.00 38.71 1.75
3982 4913 0.461870 TTCGTGCCGCTGCTGAATAT 60.462 50.000 0.70 0.00 38.71 1.28
3983 4914 0.461870 TCGTGCCGCTGCTGAATATT 60.462 50.000 0.70 0.00 38.71 1.28
3984 4915 0.041839 CGTGCCGCTGCTGAATATTC 60.042 55.000 8.60 8.60 38.71 1.75
3985 4916 1.016627 GTGCCGCTGCTGAATATTCA 58.983 50.000 17.07 17.07 38.71 2.57
3986 4917 1.605710 GTGCCGCTGCTGAATATTCAT 59.394 47.619 18.26 0.00 36.46 2.57
3987 4918 2.807967 GTGCCGCTGCTGAATATTCATA 59.192 45.455 18.26 9.90 36.46 2.15
3988 4919 2.807967 TGCCGCTGCTGAATATTCATAC 59.192 45.455 18.26 13.73 36.46 2.39
3989 4920 2.160417 GCCGCTGCTGAATATTCATACC 59.840 50.000 18.26 10.43 36.46 2.73
3990 4921 2.413112 CCGCTGCTGAATATTCATACCG 59.587 50.000 18.26 16.41 36.46 4.02
3991 4922 3.059884 CGCTGCTGAATATTCATACCGT 58.940 45.455 18.26 0.00 36.46 4.83
3992 4923 3.121944 CGCTGCTGAATATTCATACCGTC 59.878 47.826 18.26 5.76 36.46 4.79
3993 4924 3.433615 GCTGCTGAATATTCATACCGTCC 59.566 47.826 18.26 1.22 36.46 4.79
3994 4925 3.649073 TGCTGAATATTCATACCGTCCG 58.351 45.455 18.26 5.76 36.46 4.79
3995 4926 2.993899 GCTGAATATTCATACCGTCCGG 59.006 50.000 18.26 3.76 36.46 5.14
3996 4927 3.585862 CTGAATATTCATACCGTCCGGG 58.414 50.000 18.26 0.00 36.68 5.73
3997 4928 2.967201 TGAATATTCATACCGTCCGGGT 59.033 45.455 14.23 0.00 41.78 5.28
3998 4929 3.388676 TGAATATTCATACCGTCCGGGTT 59.611 43.478 14.23 0.00 40.30 4.11
3999 4930 4.141665 TGAATATTCATACCGTCCGGGTTT 60.142 41.667 14.23 0.00 40.30 3.27
4000 4931 5.969803 TGAATATTCATACCGTCCGGGTTTC 60.970 44.000 14.23 2.50 40.30 2.78
4001 4932 8.852696 TGAATATTCATACCGTCCGGGTTTCC 62.853 46.154 14.23 0.00 40.30 3.13
4005 4936 3.053896 CCGTCCGGGTTTCCTTGC 61.054 66.667 0.00 0.00 0.00 4.01
4006 4937 2.032071 CGTCCGGGTTTCCTTGCT 59.968 61.111 0.00 0.00 0.00 3.91
4007 4938 1.599797 CGTCCGGGTTTCCTTGCTT 60.600 57.895 0.00 0.00 0.00 3.91
4008 4939 1.852067 CGTCCGGGTTTCCTTGCTTG 61.852 60.000 0.00 0.00 0.00 4.01
4009 4940 1.901464 TCCGGGTTTCCTTGCTTGC 60.901 57.895 0.00 0.00 0.00 4.01
4010 4941 1.903404 CCGGGTTTCCTTGCTTGCT 60.903 57.895 0.00 0.00 0.00 3.91
4011 4942 1.286880 CGGGTTTCCTTGCTTGCTG 59.713 57.895 0.00 0.00 0.00 4.41
4012 4943 1.172180 CGGGTTTCCTTGCTTGCTGA 61.172 55.000 0.00 0.00 0.00 4.26
4013 4944 1.039856 GGGTTTCCTTGCTTGCTGAA 58.960 50.000 0.00 0.00 0.00 3.02
4014 4945 1.620323 GGGTTTCCTTGCTTGCTGAAT 59.380 47.619 0.00 0.00 0.00 2.57
4015 4946 2.825532 GGGTTTCCTTGCTTGCTGAATA 59.174 45.455 0.00 0.00 0.00 1.75
4016 4947 3.448660 GGGTTTCCTTGCTTGCTGAATAT 59.551 43.478 0.00 0.00 0.00 1.28
4017 4948 4.427312 GGTTTCCTTGCTTGCTGAATATG 58.573 43.478 0.00 0.00 0.00 1.78
4018 4949 3.788333 TTCCTTGCTTGCTGAATATGC 57.212 42.857 0.00 0.00 0.00 3.14
4019 4950 1.672363 TCCTTGCTTGCTGAATATGCG 59.328 47.619 0.00 0.00 0.00 4.73
4020 4951 1.402968 CCTTGCTTGCTGAATATGCGT 59.597 47.619 0.00 0.00 0.00 5.24
4021 4952 2.613595 CCTTGCTTGCTGAATATGCGTA 59.386 45.455 0.00 0.00 0.00 4.42
4022 4953 3.546815 CCTTGCTTGCTGAATATGCGTAC 60.547 47.826 0.00 0.00 0.00 3.67
4023 4954 2.905075 TGCTTGCTGAATATGCGTACT 58.095 42.857 0.00 0.00 0.00 2.73
4024 4955 2.609002 TGCTTGCTGAATATGCGTACTG 59.391 45.455 0.00 0.00 0.00 2.74
4025 4956 2.609459 GCTTGCTGAATATGCGTACTGT 59.391 45.455 0.00 0.00 0.00 3.55
4026 4957 3.302740 GCTTGCTGAATATGCGTACTGTC 60.303 47.826 0.00 0.00 0.00 3.51
4027 4958 2.821546 TGCTGAATATGCGTACTGTCC 58.178 47.619 0.00 0.00 0.00 4.02
4028 4959 1.787155 GCTGAATATGCGTACTGTCCG 59.213 52.381 0.00 0.00 0.00 4.79
4029 4960 2.394708 CTGAATATGCGTACTGTCCGG 58.605 52.381 0.00 0.00 0.00 5.14
4030 4961 1.067974 TGAATATGCGTACTGTCCGGG 59.932 52.381 0.00 0.00 0.00 5.73
4031 4962 1.068127 GAATATGCGTACTGTCCGGGT 59.932 52.381 0.00 0.00 0.00 5.28
4032 4963 1.117150 ATATGCGTACTGTCCGGGTT 58.883 50.000 0.00 0.00 0.00 4.11
4033 4964 0.896923 TATGCGTACTGTCCGGGTTT 59.103 50.000 0.00 0.00 0.00 3.27
4034 4965 0.390735 ATGCGTACTGTCCGGGTTTC 60.391 55.000 0.00 0.00 0.00 2.78
4035 4966 1.291272 GCGTACTGTCCGGGTTTCT 59.709 57.895 0.00 0.00 0.00 2.52
4036 4967 0.320160 GCGTACTGTCCGGGTTTCTT 60.320 55.000 0.00 0.00 0.00 2.52
4037 4968 1.706443 CGTACTGTCCGGGTTTCTTC 58.294 55.000 0.00 0.00 0.00 2.87
4038 4969 1.271656 CGTACTGTCCGGGTTTCTTCT 59.728 52.381 0.00 0.00 0.00 2.85
4039 4970 2.685100 GTACTGTCCGGGTTTCTTCTG 58.315 52.381 0.00 0.00 0.00 3.02
4040 4971 0.250338 ACTGTCCGGGTTTCTTCTGC 60.250 55.000 0.00 0.00 0.00 4.26
4041 4972 0.035458 CTGTCCGGGTTTCTTCTGCT 59.965 55.000 0.00 0.00 0.00 4.24
4042 4973 0.472471 TGTCCGGGTTTCTTCTGCTT 59.528 50.000 0.00 0.00 0.00 3.91
4043 4974 0.875059 GTCCGGGTTTCTTCTGCTTG 59.125 55.000 0.00 0.00 0.00 4.01
4044 4975 0.889186 TCCGGGTTTCTTCTGCTTGC 60.889 55.000 0.00 0.00 0.00 4.01
4045 4976 0.890996 CCGGGTTTCTTCTGCTTGCT 60.891 55.000 0.00 0.00 0.00 3.91
4046 4977 0.239347 CGGGTTTCTTCTGCTTGCTG 59.761 55.000 0.00 0.00 0.00 4.41
4047 4978 1.609208 GGGTTTCTTCTGCTTGCTGA 58.391 50.000 0.00 0.00 0.00 4.26
4048 4979 1.956477 GGGTTTCTTCTGCTTGCTGAA 59.044 47.619 12.89 12.89 0.00 3.02
4049 4980 2.287849 GGGTTTCTTCTGCTTGCTGAAC 60.288 50.000 10.17 3.06 0.00 3.18
4050 4981 2.358898 GGTTTCTTCTGCTTGCTGAACA 59.641 45.455 10.17 0.00 0.00 3.18
4051 4982 3.005155 GGTTTCTTCTGCTTGCTGAACAT 59.995 43.478 10.17 0.00 0.00 2.71
4052 4983 3.909776 TTCTTCTGCTTGCTGAACATG 57.090 42.857 10.17 0.00 0.00 3.21
4053 4984 1.538512 TCTTCTGCTTGCTGAACATGC 59.461 47.619 10.17 0.00 46.82 4.06
4059 4990 2.793933 GCTTGCTGAACATGCATACTG 58.206 47.619 0.00 0.00 46.12 2.74
4060 4991 2.163010 GCTTGCTGAACATGCATACTGT 59.837 45.455 0.00 0.00 46.12 3.55
4061 4992 3.730061 GCTTGCTGAACATGCATACTGTC 60.730 47.826 0.00 0.00 46.12 3.51
4062 4993 2.358957 TGCTGAACATGCATACTGTCC 58.641 47.619 0.00 0.00 35.31 4.02
4063 4994 1.328680 GCTGAACATGCATACTGTCCG 59.671 52.381 0.00 0.00 0.00 4.79
4064 4995 1.935873 CTGAACATGCATACTGTCCGG 59.064 52.381 0.00 0.00 0.00 5.14
4065 4996 1.299541 GAACATGCATACTGTCCGGG 58.700 55.000 0.00 0.00 0.00 5.73
4066 4997 0.618458 AACATGCATACTGTCCGGGT 59.382 50.000 0.00 0.00 0.00 5.28
4067 4998 0.618458 ACATGCATACTGTCCGGGTT 59.382 50.000 0.00 0.00 0.00 4.11
4068 4999 1.004277 ACATGCATACTGTCCGGGTTT 59.996 47.619 0.00 0.00 0.00 3.27
4069 5000 1.670811 CATGCATACTGTCCGGGTTTC 59.329 52.381 0.00 0.00 0.00 2.78
4070 5001 0.035820 TGCATACTGTCCGGGTTTCC 60.036 55.000 0.00 0.00 0.00 3.13
4071 5002 0.252197 GCATACTGTCCGGGTTTCCT 59.748 55.000 0.00 0.00 0.00 3.36
4072 5003 1.742750 GCATACTGTCCGGGTTTCCTC 60.743 57.143 0.00 0.00 0.00 3.71
4073 5004 1.831736 CATACTGTCCGGGTTTCCTCT 59.168 52.381 0.00 0.00 0.00 3.69
4074 5005 1.263356 TACTGTCCGGGTTTCCTCTG 58.737 55.000 0.00 0.00 0.00 3.35
4075 5006 1.376037 CTGTCCGGGTTTCCTCTGC 60.376 63.158 0.00 0.00 0.00 4.26
4076 5007 1.831652 CTGTCCGGGTTTCCTCTGCT 61.832 60.000 0.00 0.00 0.00 4.24
4077 5008 1.375326 GTCCGGGTTTCCTCTGCTT 59.625 57.895 0.00 0.00 0.00 3.91
4078 5009 0.955919 GTCCGGGTTTCCTCTGCTTG 60.956 60.000 0.00 0.00 0.00 4.01
4079 5010 2.335712 CCGGGTTTCCTCTGCTTGC 61.336 63.158 0.00 0.00 0.00 4.01
4080 5011 1.302832 CGGGTTTCCTCTGCTTGCT 60.303 57.895 0.00 0.00 0.00 3.91
4081 5012 1.580845 CGGGTTTCCTCTGCTTGCTG 61.581 60.000 0.00 0.00 0.00 4.41
4082 5013 0.250901 GGGTTTCCTCTGCTTGCTGA 60.251 55.000 2.45 2.45 0.00 4.26
4083 5014 1.609208 GGTTTCCTCTGCTTGCTGAA 58.391 50.000 3.95 0.00 0.00 3.02
4084 5015 1.268079 GGTTTCCTCTGCTTGCTGAAC 59.732 52.381 3.95 0.00 0.00 3.18
4085 5016 1.949525 GTTTCCTCTGCTTGCTGAACA 59.050 47.619 3.95 0.00 0.00 3.18
4086 5017 2.555757 GTTTCCTCTGCTTGCTGAACAT 59.444 45.455 3.95 0.00 0.00 2.71
4087 5018 1.817357 TCCTCTGCTTGCTGAACATG 58.183 50.000 3.95 0.00 0.00 3.21
4088 5019 0.170561 CCTCTGCTTGCTGAACATGC 59.829 55.000 0.00 0.00 46.82 4.06
4094 5025 2.793933 GCTTGCTGAACATGCATACTG 58.206 47.619 0.00 0.00 46.12 2.74
4095 5026 2.163010 GCTTGCTGAACATGCATACTGT 59.837 45.455 0.00 0.00 46.12 3.55
4096 5027 3.730061 GCTTGCTGAACATGCATACTGTC 60.730 47.826 0.00 0.00 46.12 3.51
4097 5028 3.339253 TGCTGAACATGCATACTGTCT 57.661 42.857 0.00 0.00 35.31 3.41
4098 5029 3.004862 TGCTGAACATGCATACTGTCTG 58.995 45.455 0.00 0.15 35.31 3.51
4101 5032 2.305635 TGAACATGCATACTGTCTGGGT 59.694 45.455 0.00 0.00 0.00 4.51
4104 5035 3.347216 ACATGCATACTGTCTGGGTTTC 58.653 45.455 0.00 0.00 0.00 2.78
4118 5049 3.370104 TGGGTTTCCTCTGCTTTTTCAA 58.630 40.909 0.00 0.00 0.00 2.69
4119 5050 3.384467 TGGGTTTCCTCTGCTTTTTCAAG 59.616 43.478 0.00 0.00 0.00 3.02
4120 5051 3.636764 GGGTTTCCTCTGCTTTTTCAAGA 59.363 43.478 0.00 0.00 30.57 3.02
4121 5052 4.499865 GGGTTTCCTCTGCTTTTTCAAGAC 60.500 45.833 0.00 0.00 30.57 3.01
4122 5053 4.282873 GTTTCCTCTGCTTTTTCAAGACG 58.717 43.478 0.00 0.00 30.57 4.18
4123 5054 1.873591 TCCTCTGCTTTTTCAAGACGC 59.126 47.619 0.00 0.00 30.57 5.19
4124 5055 1.603802 CCTCTGCTTTTTCAAGACGCA 59.396 47.619 0.00 0.00 30.57 5.24
4125 5056 2.603173 CCTCTGCTTTTTCAAGACGCAC 60.603 50.000 0.00 0.00 30.57 5.34
4126 5057 2.288666 TCTGCTTTTTCAAGACGCACT 58.711 42.857 0.00 0.00 30.57 4.40
4127 5058 3.462982 TCTGCTTTTTCAAGACGCACTA 58.537 40.909 0.00 0.00 30.57 2.74
4128 5059 4.065088 TCTGCTTTTTCAAGACGCACTAT 58.935 39.130 0.00 0.00 30.57 2.12
4129 5060 5.234752 TCTGCTTTTTCAAGACGCACTATA 58.765 37.500 0.00 0.00 30.57 1.31
4130 5061 5.874810 TCTGCTTTTTCAAGACGCACTATAT 59.125 36.000 0.00 0.00 30.57 0.86
4147 5078 6.128282 GCACTATATATACTGCGCACCATTTT 60.128 38.462 5.66 0.00 0.00 1.82
4151 5082 1.890876 TACTGCGCACCATTTTCTGT 58.109 45.000 5.66 1.46 0.00 3.41
4156 5087 1.522258 GCGCACCATTTTCTGTTTGTG 59.478 47.619 0.30 0.00 0.00 3.33
4164 5095 1.398692 TTTCTGTTTGTGCCACCTCC 58.601 50.000 0.00 0.00 0.00 4.30
4165 5096 0.257328 TTCTGTTTGTGCCACCTCCA 59.743 50.000 0.00 0.00 0.00 3.86
4166 5097 0.179020 TCTGTTTGTGCCACCTCCAG 60.179 55.000 0.00 0.00 0.00 3.86
4169 5100 1.202758 TGTTTGTGCCACCTCCAGTAG 60.203 52.381 0.00 0.00 0.00 2.57
4180 5111 3.329929 CCTCCAGTAGGGTGTTGTTAC 57.670 52.381 0.00 0.00 42.32 2.50
4181 5112 2.904434 CCTCCAGTAGGGTGTTGTTACT 59.096 50.000 0.00 0.00 42.32 2.24
4182 5113 3.306780 CCTCCAGTAGGGTGTTGTTACTG 60.307 52.174 4.36 4.36 42.32 2.74
4183 5114 3.576982 CTCCAGTAGGGTGTTGTTACTGA 59.423 47.826 11.34 0.00 44.36 3.41
4184 5115 3.576982 TCCAGTAGGGTGTTGTTACTGAG 59.423 47.826 11.34 3.75 44.36 3.35
4185 5116 3.326747 CAGTAGGGTGTTGTTACTGAGC 58.673 50.000 5.22 0.00 44.36 4.26
4186 5117 2.969950 AGTAGGGTGTTGTTACTGAGCA 59.030 45.455 0.00 0.00 0.00 4.26
4187 5118 2.550830 AGGGTGTTGTTACTGAGCAG 57.449 50.000 0.00 0.00 0.00 4.24
4188 5119 2.047061 AGGGTGTTGTTACTGAGCAGA 58.953 47.619 4.21 0.00 0.00 4.26
4189 5120 2.639839 AGGGTGTTGTTACTGAGCAGAT 59.360 45.455 4.21 0.00 0.00 2.90
4190 5121 3.073062 AGGGTGTTGTTACTGAGCAGATT 59.927 43.478 4.21 0.00 0.00 2.40
4191 5122 3.821033 GGGTGTTGTTACTGAGCAGATTT 59.179 43.478 4.21 0.00 0.00 2.17
4192 5123 4.278419 GGGTGTTGTTACTGAGCAGATTTT 59.722 41.667 4.21 0.00 0.00 1.82
4193 5124 5.452777 GGTGTTGTTACTGAGCAGATTTTC 58.547 41.667 4.21 0.00 0.00 2.29
4194 5125 5.140177 GTGTTGTTACTGAGCAGATTTTCG 58.860 41.667 4.21 0.00 0.00 3.46
4195 5126 4.213270 TGTTGTTACTGAGCAGATTTTCGG 59.787 41.667 4.21 0.00 0.00 4.30
4196 5127 4.002906 TGTTACTGAGCAGATTTTCGGT 57.997 40.909 4.21 0.00 36.85 4.69
4197 5128 4.385825 TGTTACTGAGCAGATTTTCGGTT 58.614 39.130 4.21 0.00 34.82 4.44
4203 5134 4.385825 TGAGCAGATTTTCGGTTGTTACT 58.614 39.130 0.00 0.00 0.00 2.24
4222 5154 2.072298 CTGCCTGTGTTTGCTACTCTC 58.928 52.381 0.00 0.00 0.00 3.20
4232 5164 4.021368 TGTTTGCTACTCTCCTACTGTTCC 60.021 45.833 0.00 0.00 0.00 3.62
4233 5165 3.741245 TGCTACTCTCCTACTGTTCCT 57.259 47.619 0.00 0.00 0.00 3.36
4239 5171 4.421131 ACTCTCCTACTGTTCCTGTCATT 58.579 43.478 0.00 0.00 0.00 2.57
4240 5172 4.221703 ACTCTCCTACTGTTCCTGTCATTG 59.778 45.833 0.00 0.00 0.00 2.82
4246 5178 1.948834 CTGTTCCTGTCATTGTGTGCA 59.051 47.619 0.00 0.00 0.00 4.57
4256 5188 3.182972 GTCATTGTGTGCATTTGCTTGTC 59.817 43.478 3.94 0.00 42.66 3.18
4259 5191 2.811855 TGTGTGCATTTGCTTGTCAAG 58.188 42.857 8.31 8.31 42.66 3.02
4266 5198 4.277921 TGCATTTGCTTGTCAAGTGTGATA 59.722 37.500 14.03 0.00 42.36 2.15
4267 5199 5.221204 TGCATTTGCTTGTCAAGTGTGATAA 60.221 36.000 14.03 1.27 42.36 1.75
4278 5210 8.642908 TGTCAAGTGTGATAATATTTCCTACG 57.357 34.615 0.00 0.00 35.80 3.51
4279 5211 8.471609 TGTCAAGTGTGATAATATTTCCTACGA 58.528 33.333 0.00 0.00 35.80 3.43
4280 5212 9.477484 GTCAAGTGTGATAATATTTCCTACGAT 57.523 33.333 0.00 0.00 35.80 3.73
4284 5216 9.832445 AGTGTGATAATATTTCCTACGATTTGT 57.168 29.630 0.00 0.00 0.00 2.83
4285 5217 9.864034 GTGTGATAATATTTCCTACGATTTGTG 57.136 33.333 0.00 0.00 0.00 3.33
4286 5218 9.051679 TGTGATAATATTTCCTACGATTTGTGG 57.948 33.333 0.00 0.00 0.00 4.17
4301 5244 8.385898 ACGATTTGTGGTTTTTATAAGACTGA 57.614 30.769 0.00 0.00 0.00 3.41
4322 5266 6.671614 TGAAAGTGAGTGTGTTTTCGTATT 57.328 33.333 0.00 0.00 33.40 1.89
4326 5270 6.287107 AGTGAGTGTGTTTTCGTATTCAAG 57.713 37.500 0.00 0.00 0.00 3.02
4330 5274 6.073980 TGAGTGTGTTTTCGTATTCAAGCTAC 60.074 38.462 0.00 0.00 0.00 3.58
4331 5275 5.989777 AGTGTGTTTTCGTATTCAAGCTACT 59.010 36.000 0.00 0.00 0.00 2.57
4339 5283 4.687018 TCGTATTCAAGCTACTTTTTCGCA 59.313 37.500 0.00 0.00 0.00 5.10
4341 5285 6.021596 CGTATTCAAGCTACTTTTTCGCATT 58.978 36.000 0.00 0.00 0.00 3.56
4346 5290 6.599437 TCAAGCTACTTTTTCGCATTACTTC 58.401 36.000 0.00 0.00 0.00 3.01
4350 5294 7.078228 AGCTACTTTTTCGCATTACTTCTTTG 58.922 34.615 0.00 0.00 0.00 2.77
4359 5303 4.905866 CGCATTACTTCTTTGAACTGTGTG 59.094 41.667 0.00 0.00 0.00 3.82
4363 5307 2.098117 ACTTCTTTGAACTGTGTGCTGC 59.902 45.455 0.00 0.00 0.00 5.25
4366 5310 3.540617 TCTTTGAACTGTGTGCTGCTAA 58.459 40.909 0.00 0.00 0.00 3.09
4369 5313 4.916983 TTGAACTGTGTGCTGCTAATTT 57.083 36.364 0.00 0.00 0.00 1.82
4370 5314 4.916983 TGAACTGTGTGCTGCTAATTTT 57.083 36.364 0.00 0.00 0.00 1.82
4371 5315 4.609947 TGAACTGTGTGCTGCTAATTTTG 58.390 39.130 0.00 0.00 0.00 2.44
4372 5316 4.097741 TGAACTGTGTGCTGCTAATTTTGT 59.902 37.500 0.00 0.00 0.00 2.83
4373 5317 3.968649 ACTGTGTGCTGCTAATTTTGTG 58.031 40.909 0.00 0.00 0.00 3.33
4374 5318 3.381272 ACTGTGTGCTGCTAATTTTGTGT 59.619 39.130 0.00 0.00 0.00 3.72
4375 5319 3.704512 TGTGTGCTGCTAATTTTGTGTG 58.295 40.909 0.00 0.00 0.00 3.82
4376 5320 2.472488 GTGTGCTGCTAATTTTGTGTGC 59.528 45.455 0.00 0.00 0.00 4.57
4424 5379 7.598493 GCTGTGGCTGTTAAATAAAAGATTTGA 59.402 33.333 0.00 0.00 35.22 2.69
4425 5380 9.643693 CTGTGGCTGTTAAATAAAAGATTTGAT 57.356 29.630 0.00 0.00 0.00 2.57
4445 5400 9.811995 ATTTGATTTGTGATTCATACTCAATGG 57.188 29.630 7.82 0.00 36.15 3.16
4446 5401 7.943079 TGATTTGTGATTCATACTCAATGGT 57.057 32.000 0.00 0.00 36.15 3.55
4450 5405 5.430886 TGTGATTCATACTCAATGGTCAGG 58.569 41.667 0.00 0.00 36.15 3.86
4451 5406 5.045651 TGTGATTCATACTCAATGGTCAGGT 60.046 40.000 0.00 0.00 36.15 4.00
4453 5408 7.147497 TGTGATTCATACTCAATGGTCAGGTAT 60.147 37.037 0.00 0.00 36.15 2.73
4460 5415 8.562892 CATACTCAATGGTCAGGTATTCATTTC 58.437 37.037 0.00 0.00 31.38 2.17
4462 5417 7.861629 ACTCAATGGTCAGGTATTCATTTCTA 58.138 34.615 0.00 0.00 0.00 2.10
4468 5437 6.126796 TGGTCAGGTATTCATTTCTATCTGCA 60.127 38.462 0.00 0.00 0.00 4.41
4469 5438 6.203723 GGTCAGGTATTCATTTCTATCTGCAC 59.796 42.308 0.00 0.00 0.00 4.57
4478 5447 5.700832 TCATTTCTATCTGCACGTCTGTTTT 59.299 36.000 0.00 0.00 0.00 2.43
4487 5456 3.435327 TGCACGTCTGTTTTATTGCTAGG 59.565 43.478 0.00 0.00 0.00 3.02
4501 5470 0.036010 GCTAGGCTTGCTCTGTTCCA 60.036 55.000 13.76 0.00 0.00 3.53
4503 5472 2.286872 CTAGGCTTGCTCTGTTCCATG 58.713 52.381 0.00 0.00 0.00 3.66
4505 5474 1.630369 AGGCTTGCTCTGTTCCATGTA 59.370 47.619 0.00 0.00 0.00 2.29
4506 5475 2.240667 AGGCTTGCTCTGTTCCATGTAT 59.759 45.455 0.00 0.00 0.00 2.29
4507 5476 2.615912 GGCTTGCTCTGTTCCATGTATC 59.384 50.000 0.00 0.00 0.00 2.24
4518 5493 7.629157 TCTGTTCCATGTATCTATTTTGGACA 58.371 34.615 0.00 0.00 36.25 4.02
4520 5495 8.821686 TGTTCCATGTATCTATTTTGGACATT 57.178 30.769 0.00 0.00 36.25 2.71
4525 5500 8.685427 CCATGTATCTATTTTGGACATTTGTGA 58.315 33.333 0.00 0.00 0.00 3.58
4526 5501 9.726232 CATGTATCTATTTTGGACATTTGTGAG 57.274 33.333 0.00 0.00 0.00 3.51
4529 5504 6.012658 TCTATTTTGGACATTTGTGAGTGC 57.987 37.500 0.00 0.00 0.00 4.40
4535 5510 4.203226 TGGACATTTGTGAGTGCTGTTTA 58.797 39.130 0.00 0.00 0.00 2.01
4541 5516 6.919662 ACATTTGTGAGTGCTGTTTATTTCTG 59.080 34.615 0.00 0.00 0.00 3.02
4544 5519 2.819608 TGAGTGCTGTTTATTTCTGGGC 59.180 45.455 0.00 0.00 0.00 5.36
4545 5520 3.084786 GAGTGCTGTTTATTTCTGGGCT 58.915 45.455 0.00 0.00 0.00 5.19
4547 5522 3.256631 AGTGCTGTTTATTTCTGGGCTTG 59.743 43.478 0.00 0.00 0.00 4.01
4550 5525 1.543802 TGTTTATTTCTGGGCTTGCGG 59.456 47.619 0.00 0.00 0.00 5.69
4552 5527 1.459450 TTATTTCTGGGCTTGCGGTC 58.541 50.000 0.00 0.00 0.00 4.79
4556 5531 1.485294 TTCTGGGCTTGCGGTCCTTA 61.485 55.000 1.97 0.00 41.10 2.69
4564 5539 3.427638 GGCTTGCGGTCCTTATTTTCTTC 60.428 47.826 0.00 0.00 0.00 2.87
4568 5543 2.223044 GCGGTCCTTATTTTCTTCAGCG 60.223 50.000 0.00 0.00 0.00 5.18
4580 5555 2.814269 TCTTCAGCGATACACTGATGC 58.186 47.619 0.00 0.00 43.40 3.91
4581 5556 1.520174 CTTCAGCGATACACTGATGCG 59.480 52.381 0.00 0.00 43.40 4.73
4582 5557 0.738389 TCAGCGATACACTGATGCGA 59.262 50.000 0.00 0.00 39.21 5.10
4583 5558 1.338020 TCAGCGATACACTGATGCGAT 59.662 47.619 0.00 0.00 39.21 4.58
4584 5559 1.454653 CAGCGATACACTGATGCGATG 59.545 52.381 0.00 0.00 37.32 3.84
4586 5561 1.860950 GCGATACACTGATGCGATGTT 59.139 47.619 0.00 0.00 0.00 2.71
4587 5562 2.285220 GCGATACACTGATGCGATGTTT 59.715 45.455 0.00 0.00 0.00 2.83
4591 5566 5.445806 CGATACACTGATGCGATGTTTTGAA 60.446 40.000 0.00 0.00 0.00 2.69
4593 5568 4.539870 ACACTGATGCGATGTTTTGAAAG 58.460 39.130 0.00 0.00 0.00 2.62
4594 5569 3.916172 CACTGATGCGATGTTTTGAAAGG 59.084 43.478 0.00 0.00 0.00 3.11
4595 5570 2.919229 CTGATGCGATGTTTTGAAAGGC 59.081 45.455 0.00 0.00 0.00 4.35
4603 5585 3.988379 TGTTTTGAAAGGCTGCTACAG 57.012 42.857 0.00 0.00 34.12 2.74
4651 5633 9.364110 GTTTTTAAAATATTCAAAAGCACACGG 57.636 29.630 0.55 0.00 0.00 4.94
4652 5634 8.873215 TTTTAAAATATTCAAAAGCACACGGA 57.127 26.923 0.00 0.00 0.00 4.69
4653 5635 8.514136 TTTAAAATATTCAAAAGCACACGGAG 57.486 30.769 0.00 0.00 0.00 4.63
4654 5636 4.701956 AATATTCAAAAGCACACGGAGG 57.298 40.909 0.00 0.00 0.00 4.30
4655 5637 2.270352 ATTCAAAAGCACACGGAGGA 57.730 45.000 0.00 0.00 0.00 3.71
4656 5638 1.593196 TTCAAAAGCACACGGAGGAG 58.407 50.000 0.00 0.00 0.00 3.69
4657 5639 0.250295 TCAAAAGCACACGGAGGAGG 60.250 55.000 0.00 0.00 0.00 4.30
4658 5640 1.600916 AAAAGCACACGGAGGAGGC 60.601 57.895 0.00 0.00 0.00 4.70
4659 5641 2.337879 AAAAGCACACGGAGGAGGCA 62.338 55.000 0.00 0.00 0.00 4.75
4660 5642 2.337879 AAAGCACACGGAGGAGGCAA 62.338 55.000 0.00 0.00 0.00 4.52
4661 5643 2.045926 GCACACGGAGGAGGCAAT 60.046 61.111 0.00 0.00 0.00 3.56
4662 5644 1.675641 GCACACGGAGGAGGCAATT 60.676 57.895 0.00 0.00 0.00 2.32
4663 5645 1.926511 GCACACGGAGGAGGCAATTG 61.927 60.000 0.00 0.00 0.00 2.32
4664 5646 0.321564 CACACGGAGGAGGCAATTGA 60.322 55.000 10.34 0.00 0.00 2.57
4665 5647 0.620556 ACACGGAGGAGGCAATTGAT 59.379 50.000 10.34 0.00 0.00 2.57
4666 5648 1.019673 CACGGAGGAGGCAATTGATG 58.980 55.000 10.34 0.00 0.00 3.07
4667 5649 0.911769 ACGGAGGAGGCAATTGATGA 59.088 50.000 10.34 0.00 0.00 2.92
4668 5650 1.134280 ACGGAGGAGGCAATTGATGAG 60.134 52.381 10.34 0.00 0.00 2.90
4669 5651 1.813092 CGGAGGAGGCAATTGATGAGG 60.813 57.143 10.34 0.00 0.00 3.86
4670 5652 1.316651 GAGGAGGCAATTGATGAGGC 58.683 55.000 10.34 0.00 0.00 4.70
4671 5653 0.106318 AGGAGGCAATTGATGAGGCC 60.106 55.000 10.34 1.30 46.77 5.19
4674 5656 3.980583 GGCAATTGATGAGGCCATG 57.019 52.632 10.34 0.00 45.70 3.66
4675 5657 1.117150 GGCAATTGATGAGGCCATGT 58.883 50.000 10.34 0.00 45.70 3.21
4676 5658 2.309613 GGCAATTGATGAGGCCATGTA 58.690 47.619 10.34 0.00 45.70 2.29
4677 5659 2.694628 GGCAATTGATGAGGCCATGTAA 59.305 45.455 10.34 0.00 45.70 2.41
4678 5660 3.491447 GGCAATTGATGAGGCCATGTAAC 60.491 47.826 10.34 0.00 45.70 2.50
4679 5661 3.130869 GCAATTGATGAGGCCATGTAACA 59.869 43.478 10.34 0.00 32.09 2.41
4680 5662 4.381825 GCAATTGATGAGGCCATGTAACAA 60.382 41.667 10.34 4.01 32.09 2.83
4681 5663 5.345702 CAATTGATGAGGCCATGTAACAAG 58.654 41.667 5.01 0.00 32.09 3.16
4682 5664 2.368439 TGATGAGGCCATGTAACAAGC 58.632 47.619 5.01 0.00 32.09 4.01
4683 5665 2.290832 TGATGAGGCCATGTAACAAGCA 60.291 45.455 5.01 0.00 32.09 3.91
4684 5666 1.825090 TGAGGCCATGTAACAAGCAG 58.175 50.000 5.01 0.00 0.00 4.24
4685 5667 1.073763 TGAGGCCATGTAACAAGCAGT 59.926 47.619 5.01 0.00 0.00 4.40
4686 5668 2.162681 GAGGCCATGTAACAAGCAGTT 58.837 47.619 5.01 0.22 44.27 3.16
4687 5669 2.558359 GAGGCCATGTAACAAGCAGTTT 59.442 45.455 5.01 0.00 41.64 2.66
4688 5670 2.558359 AGGCCATGTAACAAGCAGTTTC 59.442 45.455 5.01 0.00 41.64 2.78
4689 5671 2.352715 GGCCATGTAACAAGCAGTTTCC 60.353 50.000 0.00 0.00 41.64 3.13
4690 5672 2.295909 GCCATGTAACAAGCAGTTTCCA 59.704 45.455 0.00 0.00 41.64 3.53
4691 5673 3.612479 GCCATGTAACAAGCAGTTTCCAG 60.612 47.826 0.00 0.00 41.64 3.86
4692 5674 3.057315 CCATGTAACAAGCAGTTTCCAGG 60.057 47.826 0.00 0.96 41.64 4.45
4693 5675 2.582052 TGTAACAAGCAGTTTCCAGGG 58.418 47.619 0.00 0.00 41.64 4.45
4694 5676 2.173782 TGTAACAAGCAGTTTCCAGGGA 59.826 45.455 0.00 0.00 41.64 4.20
4695 5677 2.683211 AACAAGCAGTTTCCAGGGAT 57.317 45.000 0.00 0.00 37.03 3.85
4696 5678 2.683211 ACAAGCAGTTTCCAGGGATT 57.317 45.000 0.00 0.00 0.00 3.01
4697 5679 2.242043 ACAAGCAGTTTCCAGGGATTG 58.758 47.619 0.00 0.00 0.00 2.67
4698 5680 2.158475 ACAAGCAGTTTCCAGGGATTGA 60.158 45.455 4.57 0.00 0.00 2.57
4699 5681 2.206576 AGCAGTTTCCAGGGATTGAC 57.793 50.000 0.00 0.00 0.00 3.18
4700 5682 0.804989 GCAGTTTCCAGGGATTGACG 59.195 55.000 0.00 0.00 0.00 4.35
4701 5683 1.610624 GCAGTTTCCAGGGATTGACGA 60.611 52.381 0.00 0.00 0.00 4.20
4702 5684 2.778299 CAGTTTCCAGGGATTGACGAA 58.222 47.619 0.00 0.00 0.00 3.85
4703 5685 2.484264 CAGTTTCCAGGGATTGACGAAC 59.516 50.000 0.00 0.00 0.00 3.95
4704 5686 2.372172 AGTTTCCAGGGATTGACGAACT 59.628 45.455 0.00 0.00 0.00 3.01
4705 5687 2.742589 GTTTCCAGGGATTGACGAACTC 59.257 50.000 0.00 0.00 0.00 3.01
4706 5688 1.639722 TCCAGGGATTGACGAACTCA 58.360 50.000 0.00 0.00 0.00 3.41
4707 5689 1.974957 TCCAGGGATTGACGAACTCAA 59.025 47.619 0.00 0.00 43.28 3.02
4708 5690 2.028112 TCCAGGGATTGACGAACTCAAG 60.028 50.000 0.00 0.00 42.36 3.02
4709 5691 2.289694 CCAGGGATTGACGAACTCAAGT 60.290 50.000 0.00 0.00 42.36 3.16
4710 5692 3.056107 CCAGGGATTGACGAACTCAAGTA 60.056 47.826 0.00 0.00 42.36 2.24
4711 5693 4.562757 CCAGGGATTGACGAACTCAAGTAA 60.563 45.833 0.00 0.00 42.36 2.24
4712 5694 4.389077 CAGGGATTGACGAACTCAAGTAAC 59.611 45.833 0.00 0.00 42.36 2.50
4713 5695 4.039973 AGGGATTGACGAACTCAAGTAACA 59.960 41.667 0.00 0.00 42.36 2.41
4714 5696 4.753107 GGGATTGACGAACTCAAGTAACAA 59.247 41.667 0.00 0.00 42.36 2.83
4715 5697 5.411669 GGGATTGACGAACTCAAGTAACAAT 59.588 40.000 0.00 0.00 42.36 2.71
4716 5698 6.402226 GGGATTGACGAACTCAAGTAACAATC 60.402 42.308 0.00 0.00 42.36 2.67
4717 5699 6.369065 GGATTGACGAACTCAAGTAACAATCT 59.631 38.462 1.27 0.00 42.36 2.40
4718 5700 6.525121 TTGACGAACTCAAGTAACAATCTG 57.475 37.500 0.00 0.00 33.65 2.90
4719 5701 5.597806 TGACGAACTCAAGTAACAATCTGT 58.402 37.500 0.00 0.00 0.00 3.41
4720 5702 5.462068 TGACGAACTCAAGTAACAATCTGTG 59.538 40.000 0.00 0.00 0.00 3.66
4721 5703 5.597806 ACGAACTCAAGTAACAATCTGTGA 58.402 37.500 0.00 0.00 0.00 3.58
4722 5704 5.462398 ACGAACTCAAGTAACAATCTGTGAC 59.538 40.000 0.00 0.00 31.69 3.67
4723 5705 5.107453 CGAACTCAAGTAACAATCTGTGACC 60.107 44.000 0.00 0.00 31.92 4.02
4724 5706 5.290493 ACTCAAGTAACAATCTGTGACCA 57.710 39.130 0.00 0.00 31.92 4.02
4725 5707 5.680619 ACTCAAGTAACAATCTGTGACCAA 58.319 37.500 0.00 0.00 31.92 3.67
4726 5708 6.119536 ACTCAAGTAACAATCTGTGACCAAA 58.880 36.000 0.00 0.00 31.92 3.28
4727 5709 6.601613 ACTCAAGTAACAATCTGTGACCAAAA 59.398 34.615 0.00 0.00 31.92 2.44
4728 5710 7.285401 ACTCAAGTAACAATCTGTGACCAAAAT 59.715 33.333 0.00 0.00 31.92 1.82
4729 5711 8.684386 TCAAGTAACAATCTGTGACCAAAATA 57.316 30.769 0.00 0.00 31.92 1.40
4730 5712 8.564574 TCAAGTAACAATCTGTGACCAAAATAC 58.435 33.333 0.00 0.00 31.92 1.89
4731 5713 8.567948 CAAGTAACAATCTGTGACCAAAATACT 58.432 33.333 0.00 0.00 31.92 2.12
4732 5714 8.324163 AGTAACAATCTGTGACCAAAATACTC 57.676 34.615 0.00 0.00 31.92 2.59
4733 5715 8.157476 AGTAACAATCTGTGACCAAAATACTCT 58.843 33.333 0.00 0.00 31.92 3.24
4734 5716 7.440523 AACAATCTGTGACCAAAATACTCTC 57.559 36.000 0.00 0.00 0.00 3.20
4735 5717 6.773638 ACAATCTGTGACCAAAATACTCTCT 58.226 36.000 0.00 0.00 0.00 3.10
4736 5718 7.907389 ACAATCTGTGACCAAAATACTCTCTA 58.093 34.615 0.00 0.00 0.00 2.43
4737 5719 8.037758 ACAATCTGTGACCAAAATACTCTCTAG 58.962 37.037 0.00 0.00 0.00 2.43
4738 5720 6.531503 TCTGTGACCAAAATACTCTCTAGG 57.468 41.667 0.00 0.00 0.00 3.02
4739 5721 6.253758 TCTGTGACCAAAATACTCTCTAGGA 58.746 40.000 0.00 0.00 0.00 2.94
4740 5722 6.378564 TCTGTGACCAAAATACTCTCTAGGAG 59.621 42.308 6.67 6.67 46.87 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
163 164 5.637006 TGTTAATCCAAGGGAAACAATCG 57.363 39.130 1.13 0.00 31.86 3.34
360 423 4.594675 AGCAAAGAGGACTAGAGGAGTA 57.405 45.455 0.00 0.00 39.06 2.59
400 475 5.633830 AGCCACAAGAAAATGTATCACAG 57.366 39.130 0.00 0.00 30.84 3.66
425 501 8.677148 AGAAACAAATAGCTAGAGTTGTTGAA 57.323 30.769 23.23 0.00 41.94 2.69
521 599 5.546526 GAAAAGGGAGCCTATCTGACATAG 58.453 45.833 0.00 0.00 31.13 2.23
534 612 1.801178 CAAGTGAGACGAAAAGGGAGC 59.199 52.381 0.00 0.00 0.00 4.70
565 668 5.544176 TCAGGTTAAAATGCCCCAAACATTA 59.456 36.000 0.00 0.00 36.74 1.90
569 672 3.576550 TCTCAGGTTAAAATGCCCCAAAC 59.423 43.478 0.00 0.00 0.00 2.93
669 1509 4.458951 GCTATCGTCAATGGCAAACTAG 57.541 45.455 0.00 0.00 41.29 2.57
697 1544 5.360144 TCCGTGGGAATTTCAAAACACTTAA 59.640 36.000 0.00 0.00 0.00 1.85
708 1555 1.313091 GGCAGGTCCGTGGGAATTTC 61.313 60.000 0.00 0.00 31.38 2.17
718 1565 1.669115 CTGACAACAGGCAGGTCCG 60.669 63.158 0.00 0.00 40.14 4.79
811 1661 6.264292 TGAAATAAGCACAGCCTTTCAAAGTA 59.736 34.615 0.00 0.00 32.87 2.24
812 1662 5.068987 TGAAATAAGCACAGCCTTTCAAAGT 59.931 36.000 0.00 0.00 32.87 2.66
823 1674 5.633830 ATGGACAAGTGAAATAAGCACAG 57.366 39.130 0.00 0.00 38.70 3.66
825 1676 5.630680 CACAATGGACAAGTGAAATAAGCAC 59.369 40.000 3.14 0.00 35.33 4.40
840 1705 2.568623 ACTCTCCAACCACAATGGAC 57.431 50.000 0.84 0.00 41.98 4.02
935 1831 5.237344 GGCTAGTTGTATATTTGCCTCAGTG 59.763 44.000 0.00 0.00 36.32 3.66
958 1855 1.127567 TCTCACTGTTGGGTGGGAGG 61.128 60.000 0.00 0.00 41.20 4.30
983 1880 4.878397 CCGCCATTACTTTCTGAGAATTCT 59.122 41.667 7.95 7.95 0.00 2.40
984 1881 4.876107 TCCGCCATTACTTTCTGAGAATTC 59.124 41.667 0.00 0.00 0.00 2.17
1122 2021 0.682292 TCACAACACGACCCATGCTA 59.318 50.000 0.00 0.00 0.00 3.49
1172 2071 2.486203 CGGTTTCGGATGTCCATTTGAA 59.514 45.455 0.00 0.00 35.14 2.69
1351 2250 3.643159 AGCAATCCGGTTCAAAGAAAC 57.357 42.857 0.00 0.00 0.00 2.78
1456 2355 3.686726 ACAATGTAACTTGAGCTGCTAGC 59.313 43.478 8.10 8.10 42.84 3.42
1922 2827 1.093159 CATCAGTCTGCTGCCCTTTC 58.907 55.000 0.00 0.00 42.29 2.62
2052 2957 7.255381 GGACATTCATGATTTGTATCTCTTGGG 60.255 40.741 10.78 0.00 0.00 4.12
2342 3247 8.132995 ACCGTATAAGTTGTTTCCTTTTGAAAG 58.867 33.333 0.00 0.00 43.46 2.62
2607 3513 3.064820 GCAATACCAATCGACGTCCATTT 59.935 43.478 10.58 0.00 0.00 2.32
3656 4572 5.630121 TGGTGATTTCAAAGAAGCCTAGAA 58.370 37.500 0.00 0.00 0.00 2.10
3713 4629 1.348064 CCACTGTGTCCCTCCAACTA 58.652 55.000 7.08 0.00 0.00 2.24
3715 4631 1.600916 GCCACTGTGTCCCTCCAAC 60.601 63.158 7.08 0.00 0.00 3.77
3761 4677 4.103469 ACACATTTCCCAACCAGTACAGTA 59.897 41.667 0.00 0.00 0.00 2.74
3762 4678 3.117663 ACACATTTCCCAACCAGTACAGT 60.118 43.478 0.00 0.00 0.00 3.55
3763 4679 3.486383 ACACATTTCCCAACCAGTACAG 58.514 45.455 0.00 0.00 0.00 2.74
3764 4680 3.586470 ACACATTTCCCAACCAGTACA 57.414 42.857 0.00 0.00 0.00 2.90
3765 4681 4.142469 GCATACACATTTCCCAACCAGTAC 60.142 45.833 0.00 0.00 0.00 2.73
3766 4682 4.013728 GCATACACATTTCCCAACCAGTA 58.986 43.478 0.00 0.00 0.00 2.74
3801 4718 0.253044 TCATTAGCAGGTGAGTGGCC 59.747 55.000 0.00 0.00 0.00 5.36
3818 4735 3.507411 AGGAAGCAAGTAGTGGTACTCA 58.493 45.455 0.00 0.00 38.66 3.41
3819 4743 4.538746 AAGGAAGCAAGTAGTGGTACTC 57.461 45.455 0.00 0.00 38.66 2.59
3859 4783 9.671279 ATCTTATCACATCAACATGTCAAAGTA 57.329 29.630 0.00 0.00 41.69 2.24
3882 4807 3.780294 TCCAGCCTGTATAACCAACATCT 59.220 43.478 0.00 0.00 0.00 2.90
3907 4838 4.084287 TCCTTGATCTGCAAAGCATCTTT 58.916 39.130 0.00 0.00 38.13 2.52
3917 4848 2.795329 GTCCCTTTTCCTTGATCTGCA 58.205 47.619 0.00 0.00 0.00 4.41
3918 4849 1.740025 CGTCCCTTTTCCTTGATCTGC 59.260 52.381 0.00 0.00 0.00 4.26
3919 4850 3.334583 TCGTCCCTTTTCCTTGATCTG 57.665 47.619 0.00 0.00 0.00 2.90
3920 4851 3.777522 AGATCGTCCCTTTTCCTTGATCT 59.222 43.478 0.00 0.00 37.01 2.75
3921 4852 3.873952 CAGATCGTCCCTTTTCCTTGATC 59.126 47.826 0.00 0.00 0.00 2.92
3922 4853 3.519510 TCAGATCGTCCCTTTTCCTTGAT 59.480 43.478 0.00 0.00 0.00 2.57
3923 4854 2.903784 TCAGATCGTCCCTTTTCCTTGA 59.096 45.455 0.00 0.00 0.00 3.02
3924 4855 3.334583 TCAGATCGTCCCTTTTCCTTG 57.665 47.619 0.00 0.00 0.00 3.61
3925 4856 4.518249 GAATCAGATCGTCCCTTTTCCTT 58.482 43.478 0.00 0.00 0.00 3.36
3926 4857 3.118223 GGAATCAGATCGTCCCTTTTCCT 60.118 47.826 0.00 0.00 0.00 3.36
3927 4858 3.206964 GGAATCAGATCGTCCCTTTTCC 58.793 50.000 0.00 0.00 0.00 3.13
3928 4859 3.873910 TGGAATCAGATCGTCCCTTTTC 58.126 45.455 0.00 0.00 0.00 2.29
3929 4860 3.264450 ACTGGAATCAGATCGTCCCTTTT 59.736 43.478 0.00 0.00 43.49 2.27
3930 4861 2.840651 ACTGGAATCAGATCGTCCCTTT 59.159 45.455 0.00 0.00 43.49 3.11
3931 4862 2.169352 CACTGGAATCAGATCGTCCCTT 59.831 50.000 0.00 0.00 43.49 3.95
3932 4863 1.759445 CACTGGAATCAGATCGTCCCT 59.241 52.381 0.00 0.00 43.49 4.20
3933 4864 1.482593 ACACTGGAATCAGATCGTCCC 59.517 52.381 0.00 0.00 43.49 4.46
3934 4865 2.969628 ACACTGGAATCAGATCGTCC 57.030 50.000 0.00 0.00 43.49 4.79
3935 4866 5.000012 ACTAACACTGGAATCAGATCGTC 58.000 43.478 0.00 0.00 43.49 4.20
3936 4867 6.716934 ATACTAACACTGGAATCAGATCGT 57.283 37.500 0.00 0.00 43.49 3.73
3937 4868 8.300286 ACATATACTAACACTGGAATCAGATCG 58.700 37.037 0.00 0.00 43.49 3.69
3938 4869 9.988815 AACATATACTAACACTGGAATCAGATC 57.011 33.333 0.00 0.00 43.49 2.75
3939 4870 9.988815 GAACATATACTAACACTGGAATCAGAT 57.011 33.333 0.00 0.00 43.49 2.90
3940 4871 8.135529 CGAACATATACTAACACTGGAATCAGA 58.864 37.037 0.00 0.00 43.49 3.27
3941 4872 7.921214 ACGAACATATACTAACACTGGAATCAG 59.079 37.037 0.00 0.00 46.10 2.90
3942 4873 7.704899 CACGAACATATACTAACACTGGAATCA 59.295 37.037 0.00 0.00 0.00 2.57
3943 4874 7.306632 GCACGAACATATACTAACACTGGAATC 60.307 40.741 0.00 0.00 0.00 2.52
3944 4875 6.479001 GCACGAACATATACTAACACTGGAAT 59.521 38.462 0.00 0.00 0.00 3.01
3945 4876 5.808540 GCACGAACATATACTAACACTGGAA 59.191 40.000 0.00 0.00 0.00 3.53
3946 4877 5.345702 GCACGAACATATACTAACACTGGA 58.654 41.667 0.00 0.00 0.00 3.86
3947 4878 4.506654 GGCACGAACATATACTAACACTGG 59.493 45.833 0.00 0.00 0.00 4.00
3948 4879 5.637104 GGCACGAACATATACTAACACTG 57.363 43.478 0.00 0.00 0.00 3.66
3964 4895 4.927762 TGAATATTCAGCAGCGGCACGA 62.928 50.000 14.23 4.07 43.58 4.35
3965 4896 2.663646 TGAATATTCAGCAGCGGCACG 61.664 52.381 14.23 1.31 43.67 5.34
3966 4897 1.016627 TGAATATTCAGCAGCGGCAC 58.983 50.000 14.23 0.00 44.61 5.01
3967 4898 1.971481 ATGAATATTCAGCAGCGGCA 58.029 45.000 21.97 0.00 44.61 5.69
3968 4899 2.160417 GGTATGAATATTCAGCAGCGGC 59.840 50.000 21.97 0.00 41.08 6.53
3969 4900 2.413112 CGGTATGAATATTCAGCAGCGG 59.587 50.000 28.96 18.54 41.08 5.52
3970 4901 3.059884 ACGGTATGAATATTCAGCAGCG 58.940 45.455 31.81 31.81 44.99 5.18
3971 4902 3.433615 GGACGGTATGAATATTCAGCAGC 59.566 47.826 21.97 18.81 41.08 5.25
3972 4903 3.675225 CGGACGGTATGAATATTCAGCAG 59.325 47.826 21.97 18.40 41.08 4.24
3973 4904 3.554129 CCGGACGGTATGAATATTCAGCA 60.554 47.826 21.97 10.70 41.08 4.41
3974 4905 2.993899 CCGGACGGTATGAATATTCAGC 59.006 50.000 21.97 16.48 41.08 4.26
3975 4906 3.006537 ACCCGGACGGTATGAATATTCAG 59.993 47.826 21.97 11.66 45.97 3.02
3976 4907 2.967201 ACCCGGACGGTATGAATATTCA 59.033 45.455 20.07 20.07 45.97 2.57
3977 4908 3.672767 ACCCGGACGGTATGAATATTC 57.327 47.619 0.73 8.60 45.97 1.75
3988 4919 3.053896 GCAAGGAAACCCGGACGG 61.054 66.667 0.73 3.25 37.81 4.79
3989 4920 1.599797 AAGCAAGGAAACCCGGACG 60.600 57.895 0.73 0.00 0.00 4.79
3990 4921 1.956802 CAAGCAAGGAAACCCGGAC 59.043 57.895 0.73 0.00 0.00 4.79
3991 4922 1.901464 GCAAGCAAGGAAACCCGGA 60.901 57.895 0.73 0.00 0.00 5.14
3992 4923 1.903404 AGCAAGCAAGGAAACCCGG 60.903 57.895 0.00 0.00 0.00 5.73
3993 4924 1.172180 TCAGCAAGCAAGGAAACCCG 61.172 55.000 0.00 0.00 0.00 5.28
3994 4925 1.039856 TTCAGCAAGCAAGGAAACCC 58.960 50.000 0.00 0.00 0.00 4.11
3995 4926 4.427312 CATATTCAGCAAGCAAGGAAACC 58.573 43.478 0.00 0.00 0.00 3.27
3996 4927 3.861689 GCATATTCAGCAAGCAAGGAAAC 59.138 43.478 0.00 0.00 0.00 2.78
3997 4928 3.427909 CGCATATTCAGCAAGCAAGGAAA 60.428 43.478 0.00 0.00 0.00 3.13
3998 4929 2.097954 CGCATATTCAGCAAGCAAGGAA 59.902 45.455 0.00 0.00 0.00 3.36
3999 4930 1.672363 CGCATATTCAGCAAGCAAGGA 59.328 47.619 0.00 0.00 0.00 3.36
4000 4931 1.402968 ACGCATATTCAGCAAGCAAGG 59.597 47.619 0.00 0.00 0.00 3.61
4001 4932 2.838386 ACGCATATTCAGCAAGCAAG 57.162 45.000 0.00 0.00 0.00 4.01
4002 4933 3.063861 CAGTACGCATATTCAGCAAGCAA 59.936 43.478 0.00 0.00 0.00 3.91
4003 4934 2.609002 CAGTACGCATATTCAGCAAGCA 59.391 45.455 0.00 0.00 0.00 3.91
4004 4935 2.609459 ACAGTACGCATATTCAGCAAGC 59.391 45.455 0.00 0.00 0.00 4.01
4005 4936 3.246226 GGACAGTACGCATATTCAGCAAG 59.754 47.826 0.00 0.00 0.00 4.01
4006 4937 3.194861 GGACAGTACGCATATTCAGCAA 58.805 45.455 0.00 0.00 0.00 3.91
4007 4938 2.798145 CGGACAGTACGCATATTCAGCA 60.798 50.000 0.00 0.00 0.00 4.41
4008 4939 1.787155 CGGACAGTACGCATATTCAGC 59.213 52.381 0.00 0.00 0.00 4.26
4009 4940 2.394708 CCGGACAGTACGCATATTCAG 58.605 52.381 0.00 0.00 0.00 3.02
4010 4941 1.067974 CCCGGACAGTACGCATATTCA 59.932 52.381 0.73 0.00 0.00 2.57
4011 4942 1.068127 ACCCGGACAGTACGCATATTC 59.932 52.381 0.73 0.00 0.00 1.75
4012 4943 1.117150 ACCCGGACAGTACGCATATT 58.883 50.000 0.73 0.00 0.00 1.28
4013 4944 1.117150 AACCCGGACAGTACGCATAT 58.883 50.000 0.73 0.00 0.00 1.78
4014 4945 0.896923 AAACCCGGACAGTACGCATA 59.103 50.000 0.73 0.00 0.00 3.14
4015 4946 0.390735 GAAACCCGGACAGTACGCAT 60.391 55.000 0.73 0.00 0.00 4.73
4016 4947 1.005867 GAAACCCGGACAGTACGCA 60.006 57.895 0.73 0.00 0.00 5.24
4017 4948 0.320160 AAGAAACCCGGACAGTACGC 60.320 55.000 0.73 0.00 0.00 4.42
4018 4949 1.271656 AGAAGAAACCCGGACAGTACG 59.728 52.381 0.73 0.00 0.00 3.67
4019 4950 2.685100 CAGAAGAAACCCGGACAGTAC 58.315 52.381 0.73 0.00 0.00 2.73
4020 4951 1.001633 GCAGAAGAAACCCGGACAGTA 59.998 52.381 0.73 0.00 0.00 2.74
4021 4952 0.250338 GCAGAAGAAACCCGGACAGT 60.250 55.000 0.73 0.00 0.00 3.55
4022 4953 0.035458 AGCAGAAGAAACCCGGACAG 59.965 55.000 0.73 0.00 0.00 3.51
4023 4954 0.472471 AAGCAGAAGAAACCCGGACA 59.528 50.000 0.73 0.00 0.00 4.02
4024 4955 0.875059 CAAGCAGAAGAAACCCGGAC 59.125 55.000 0.73 0.00 0.00 4.79
4025 4956 0.889186 GCAAGCAGAAGAAACCCGGA 60.889 55.000 0.73 0.00 0.00 5.14
4026 4957 0.890996 AGCAAGCAGAAGAAACCCGG 60.891 55.000 0.00 0.00 0.00 5.73
4027 4958 0.239347 CAGCAAGCAGAAGAAACCCG 59.761 55.000 0.00 0.00 0.00 5.28
4028 4959 1.609208 TCAGCAAGCAGAAGAAACCC 58.391 50.000 0.00 0.00 0.00 4.11
4029 4960 2.358898 TGTTCAGCAAGCAGAAGAAACC 59.641 45.455 0.00 0.00 0.00 3.27
4030 4961 3.698029 TGTTCAGCAAGCAGAAGAAAC 57.302 42.857 0.00 0.00 0.00 2.78
4031 4962 3.551454 GCATGTTCAGCAAGCAGAAGAAA 60.551 43.478 0.00 0.00 41.07 2.52
4032 4963 2.030540 GCATGTTCAGCAAGCAGAAGAA 60.031 45.455 0.00 0.00 41.07 2.52
4033 4964 1.538512 GCATGTTCAGCAAGCAGAAGA 59.461 47.619 0.00 0.00 41.07 2.87
4034 4965 1.268625 TGCATGTTCAGCAAGCAGAAG 59.731 47.619 0.00 0.00 45.41 2.85
4035 4966 1.320507 TGCATGTTCAGCAAGCAGAA 58.679 45.000 0.00 0.00 45.41 3.02
4036 4967 3.024431 TGCATGTTCAGCAAGCAGA 57.976 47.368 0.00 0.00 45.41 4.26
4039 4970 2.163010 ACAGTATGCATGTTCAGCAAGC 59.837 45.455 10.16 0.00 46.27 4.01
4040 4971 3.181503 GGACAGTATGCATGTTCAGCAAG 60.182 47.826 10.16 0.00 46.27 4.01
4041 4972 2.749076 GGACAGTATGCATGTTCAGCAA 59.251 45.455 10.16 0.00 46.27 3.91
4043 4974 1.328680 CGGACAGTATGCATGTTCAGC 59.671 52.381 10.16 0.00 42.53 4.26
4044 4975 1.935873 CCGGACAGTATGCATGTTCAG 59.064 52.381 10.16 1.05 42.53 3.02
4045 4976 1.406751 CCCGGACAGTATGCATGTTCA 60.407 52.381 10.16 0.00 42.53 3.18
4046 4977 1.299541 CCCGGACAGTATGCATGTTC 58.700 55.000 10.16 0.00 42.53 3.18
4047 4978 0.618458 ACCCGGACAGTATGCATGTT 59.382 50.000 10.16 0.00 42.53 2.71
4048 4979 0.618458 AACCCGGACAGTATGCATGT 59.382 50.000 10.16 0.00 42.53 3.21
4049 4980 1.670811 GAAACCCGGACAGTATGCATG 59.329 52.381 10.16 0.00 42.53 4.06
4050 4981 1.408266 GGAAACCCGGACAGTATGCAT 60.408 52.381 0.73 3.79 42.53 3.96
4051 4982 0.035820 GGAAACCCGGACAGTATGCA 60.036 55.000 0.73 0.00 42.53 3.96
4052 4983 0.252197 AGGAAACCCGGACAGTATGC 59.748 55.000 0.73 0.00 42.53 3.14
4053 4984 1.831736 AGAGGAAACCCGGACAGTATG 59.168 52.381 0.73 0.00 46.00 2.39
4054 4985 1.831736 CAGAGGAAACCCGGACAGTAT 59.168 52.381 0.73 0.00 0.00 2.12
4055 4986 1.263356 CAGAGGAAACCCGGACAGTA 58.737 55.000 0.73 0.00 0.00 2.74
4056 4987 2.058675 CAGAGGAAACCCGGACAGT 58.941 57.895 0.73 0.00 0.00 3.55
4057 4988 1.376037 GCAGAGGAAACCCGGACAG 60.376 63.158 0.73 0.00 0.00 3.51
4058 4989 1.415672 AAGCAGAGGAAACCCGGACA 61.416 55.000 0.73 0.00 0.00 4.02
4059 4990 0.955919 CAAGCAGAGGAAACCCGGAC 60.956 60.000 0.73 0.00 0.00 4.79
4060 4991 1.374947 CAAGCAGAGGAAACCCGGA 59.625 57.895 0.73 0.00 0.00 5.14
4061 4992 2.335712 GCAAGCAGAGGAAACCCGG 61.336 63.158 0.00 0.00 0.00 5.73
4062 4993 1.302832 AGCAAGCAGAGGAAACCCG 60.303 57.895 0.00 0.00 0.00 5.28
4063 4994 0.250901 TCAGCAAGCAGAGGAAACCC 60.251 55.000 0.00 0.00 0.00 4.11
4064 4995 1.268079 GTTCAGCAAGCAGAGGAAACC 59.732 52.381 0.00 0.00 0.00 3.27
4065 4996 1.949525 TGTTCAGCAAGCAGAGGAAAC 59.050 47.619 0.00 0.00 0.00 2.78
4066 4997 2.346766 TGTTCAGCAAGCAGAGGAAA 57.653 45.000 0.00 0.00 0.00 3.13
4067 4998 2.156917 CATGTTCAGCAAGCAGAGGAA 58.843 47.619 0.00 0.00 0.00 3.36
4068 4999 1.817357 CATGTTCAGCAAGCAGAGGA 58.183 50.000 0.00 0.00 0.00 3.71
4069 5000 0.170561 GCATGTTCAGCAAGCAGAGG 59.829 55.000 0.00 0.00 41.07 3.69
4070 5001 0.879090 TGCATGTTCAGCAAGCAGAG 59.121 50.000 0.00 0.00 45.41 3.35
4071 5002 3.024431 TGCATGTTCAGCAAGCAGA 57.976 47.368 0.00 0.00 45.41 4.26
4074 5005 2.163010 ACAGTATGCATGTTCAGCAAGC 59.837 45.455 10.16 0.00 46.27 4.01
4075 5006 3.688185 AGACAGTATGCATGTTCAGCAAG 59.312 43.478 10.16 0.00 46.27 4.01
4076 5007 3.437741 CAGACAGTATGCATGTTCAGCAA 59.562 43.478 10.16 0.00 46.27 3.91
4078 5009 2.353889 CCAGACAGTATGCATGTTCAGC 59.646 50.000 10.16 0.00 42.53 4.26
4079 5010 2.941064 CCCAGACAGTATGCATGTTCAG 59.059 50.000 10.16 0.00 42.53 3.02
4080 5011 2.305635 ACCCAGACAGTATGCATGTTCA 59.694 45.455 10.16 0.00 42.53 3.18
4081 5012 2.991250 ACCCAGACAGTATGCATGTTC 58.009 47.619 10.16 0.00 42.53 3.18
4082 5013 3.439857 AACCCAGACAGTATGCATGTT 57.560 42.857 10.16 0.00 42.53 2.71
4083 5014 3.347216 GAAACCCAGACAGTATGCATGT 58.653 45.455 10.16 0.00 42.53 3.21
4084 5015 2.684881 GGAAACCCAGACAGTATGCATG 59.315 50.000 10.16 0.00 42.53 4.06
4085 5016 2.578021 AGGAAACCCAGACAGTATGCAT 59.422 45.455 3.79 3.79 42.53 3.96
4086 5017 1.985159 AGGAAACCCAGACAGTATGCA 59.015 47.619 0.00 0.00 42.53 3.96
4087 5018 2.237392 AGAGGAAACCCAGACAGTATGC 59.763 50.000 0.00 0.00 42.53 3.14
4088 5019 3.866651 CAGAGGAAACCCAGACAGTATG 58.133 50.000 0.00 0.00 46.00 2.39
4089 5020 2.237392 GCAGAGGAAACCCAGACAGTAT 59.763 50.000 0.00 0.00 0.00 2.12
4090 5021 1.623811 GCAGAGGAAACCCAGACAGTA 59.376 52.381 0.00 0.00 0.00 2.74
4091 5022 0.398318 GCAGAGGAAACCCAGACAGT 59.602 55.000 0.00 0.00 0.00 3.55
4092 5023 0.689623 AGCAGAGGAAACCCAGACAG 59.310 55.000 0.00 0.00 0.00 3.51
4093 5024 1.140312 AAGCAGAGGAAACCCAGACA 58.860 50.000 0.00 0.00 0.00 3.41
4094 5025 2.278332 AAAGCAGAGGAAACCCAGAC 57.722 50.000 0.00 0.00 0.00 3.51
4095 5026 3.222603 GAAAAAGCAGAGGAAACCCAGA 58.777 45.455 0.00 0.00 0.00 3.86
4096 5027 2.958355 TGAAAAAGCAGAGGAAACCCAG 59.042 45.455 0.00 0.00 0.00 4.45
4097 5028 3.025322 TGAAAAAGCAGAGGAAACCCA 57.975 42.857 0.00 0.00 0.00 4.51
4098 5029 3.636764 TCTTGAAAAAGCAGAGGAAACCC 59.363 43.478 0.00 0.00 0.00 4.11
4101 5032 3.243068 GCGTCTTGAAAAAGCAGAGGAAA 60.243 43.478 0.00 0.00 0.00 3.13
4104 5035 1.603802 TGCGTCTTGAAAAAGCAGAGG 59.396 47.619 0.00 0.00 33.57 3.69
4123 5054 6.968131 AAATGGTGCGCAGTATATATAGTG 57.032 37.500 12.22 19.37 36.89 2.74
4124 5055 7.331934 CAGAAAATGGTGCGCAGTATATATAGT 59.668 37.037 12.22 0.00 0.00 2.12
4125 5056 7.331934 ACAGAAAATGGTGCGCAGTATATATAG 59.668 37.037 12.22 0.00 0.00 1.31
4126 5057 7.158697 ACAGAAAATGGTGCGCAGTATATATA 58.841 34.615 12.22 0.00 0.00 0.86
4127 5058 5.997746 ACAGAAAATGGTGCGCAGTATATAT 59.002 36.000 12.22 0.00 0.00 0.86
4128 5059 5.364778 ACAGAAAATGGTGCGCAGTATATA 58.635 37.500 12.22 0.00 0.00 0.86
4129 5060 4.199310 ACAGAAAATGGTGCGCAGTATAT 58.801 39.130 12.22 0.00 0.00 0.86
4130 5061 3.605634 ACAGAAAATGGTGCGCAGTATA 58.394 40.909 12.22 0.00 0.00 1.47
4136 5067 1.522258 CACAAACAGAAAATGGTGCGC 59.478 47.619 0.00 0.00 0.00 6.09
4141 5072 2.102925 AGGTGGCACAAACAGAAAATGG 59.897 45.455 20.82 0.00 44.16 3.16
4147 5078 0.179020 CTGGAGGTGGCACAAACAGA 60.179 55.000 20.82 0.00 44.16 3.41
4151 5082 0.400213 CCTACTGGAGGTGGCACAAA 59.600 55.000 20.82 0.20 40.98 2.83
4164 5095 3.244078 TGCTCAGTAACAACACCCTACTG 60.244 47.826 2.71 2.71 42.51 2.74
4165 5096 2.969950 TGCTCAGTAACAACACCCTACT 59.030 45.455 0.00 0.00 0.00 2.57
4166 5097 3.006537 TCTGCTCAGTAACAACACCCTAC 59.993 47.826 0.00 0.00 0.00 3.18
4169 5100 2.543777 TCTGCTCAGTAACAACACCC 57.456 50.000 0.00 0.00 0.00 4.61
4174 5105 4.385825 ACCGAAAATCTGCTCAGTAACAA 58.614 39.130 0.00 0.00 0.00 2.83
4175 5106 4.002906 ACCGAAAATCTGCTCAGTAACA 57.997 40.909 0.00 0.00 0.00 2.41
4176 5107 4.213482 ACAACCGAAAATCTGCTCAGTAAC 59.787 41.667 0.00 0.00 0.00 2.50
4177 5108 4.385825 ACAACCGAAAATCTGCTCAGTAA 58.614 39.130 0.00 0.00 0.00 2.24
4178 5109 4.002906 ACAACCGAAAATCTGCTCAGTA 57.997 40.909 0.00 0.00 0.00 2.74
4179 5110 2.851195 ACAACCGAAAATCTGCTCAGT 58.149 42.857 0.00 0.00 0.00 3.41
4180 5111 3.904136 AACAACCGAAAATCTGCTCAG 57.096 42.857 0.00 0.00 0.00 3.35
4181 5112 4.213270 CAGTAACAACCGAAAATCTGCTCA 59.787 41.667 0.00 0.00 0.00 4.26
4182 5113 4.712763 CAGTAACAACCGAAAATCTGCTC 58.287 43.478 0.00 0.00 0.00 4.26
4183 5114 3.058224 GCAGTAACAACCGAAAATCTGCT 60.058 43.478 0.00 0.00 42.16 4.24
4184 5115 3.234386 GCAGTAACAACCGAAAATCTGC 58.766 45.455 0.00 0.00 39.73 4.26
4185 5116 3.502211 AGGCAGTAACAACCGAAAATCTG 59.498 43.478 0.00 0.00 0.00 2.90
4186 5117 3.502211 CAGGCAGTAACAACCGAAAATCT 59.498 43.478 0.00 0.00 0.00 2.40
4187 5118 3.252458 ACAGGCAGTAACAACCGAAAATC 59.748 43.478 0.00 0.00 0.00 2.17
4188 5119 3.004315 CACAGGCAGTAACAACCGAAAAT 59.996 43.478 0.00 0.00 0.00 1.82
4189 5120 2.356382 CACAGGCAGTAACAACCGAAAA 59.644 45.455 0.00 0.00 0.00 2.29
4190 5121 1.944024 CACAGGCAGTAACAACCGAAA 59.056 47.619 0.00 0.00 0.00 3.46
4191 5122 1.134340 ACACAGGCAGTAACAACCGAA 60.134 47.619 0.00 0.00 0.00 4.30
4192 5123 0.466543 ACACAGGCAGTAACAACCGA 59.533 50.000 0.00 0.00 0.00 4.69
4193 5124 1.305201 AACACAGGCAGTAACAACCG 58.695 50.000 0.00 0.00 0.00 4.44
4194 5125 2.798145 GCAAACACAGGCAGTAACAACC 60.798 50.000 0.00 0.00 0.00 3.77
4195 5126 2.099098 AGCAAACACAGGCAGTAACAAC 59.901 45.455 0.00 0.00 0.00 3.32
4196 5127 2.374184 AGCAAACACAGGCAGTAACAA 58.626 42.857 0.00 0.00 0.00 2.83
4197 5128 2.051334 AGCAAACACAGGCAGTAACA 57.949 45.000 0.00 0.00 0.00 2.41
4203 5134 1.270839 GGAGAGTAGCAAACACAGGCA 60.271 52.381 0.00 0.00 0.00 4.75
4222 5154 3.748048 CACACAATGACAGGAACAGTAGG 59.252 47.826 0.00 0.00 0.00 3.18
4232 5164 3.021269 AGCAAATGCACACAATGACAG 57.979 42.857 8.28 0.00 45.16 3.51
4233 5165 3.124560 CAAGCAAATGCACACAATGACA 58.875 40.909 8.28 0.00 45.16 3.58
4239 5171 2.166050 ACTTGACAAGCAAATGCACACA 59.834 40.909 15.24 0.00 45.16 3.72
4240 5172 2.536803 CACTTGACAAGCAAATGCACAC 59.463 45.455 15.24 0.00 45.16 3.82
4259 5191 9.864034 CACAAATCGTAGGAAATATTATCACAC 57.136 33.333 0.00 0.00 0.00 3.82
4280 5212 9.796120 CACTTTCAGTCTTATAAAAACCACAAA 57.204 29.630 0.00 0.00 0.00 2.83
4281 5213 9.179909 TCACTTTCAGTCTTATAAAAACCACAA 57.820 29.630 0.00 0.00 0.00 3.33
4284 5216 8.836413 CACTCACTTTCAGTCTTATAAAAACCA 58.164 33.333 0.00 0.00 0.00 3.67
4285 5217 8.837389 ACACTCACTTTCAGTCTTATAAAAACC 58.163 33.333 0.00 0.00 0.00 3.27
4286 5218 9.651718 CACACTCACTTTCAGTCTTATAAAAAC 57.348 33.333 0.00 0.00 0.00 2.43
4289 5232 8.958119 AACACACTCACTTTCAGTCTTATAAA 57.042 30.769 0.00 0.00 0.00 1.40
4301 5244 6.671614 TGAATACGAAAACACACTCACTTT 57.328 33.333 0.00 0.00 0.00 2.66
4305 5248 4.814234 AGCTTGAATACGAAAACACACTCA 59.186 37.500 0.00 0.00 0.00 3.41
4322 5266 6.426937 AGAAGTAATGCGAAAAAGTAGCTTGA 59.573 34.615 0.00 0.00 0.00 3.02
4326 5270 7.075741 TCAAAGAAGTAATGCGAAAAAGTAGC 58.924 34.615 0.00 0.00 0.00 3.58
4330 5274 7.432252 ACAGTTCAAAGAAGTAATGCGAAAAAG 59.568 33.333 0.00 0.00 0.00 2.27
4331 5275 7.219917 CACAGTTCAAAGAAGTAATGCGAAAAA 59.780 33.333 0.00 0.00 0.00 1.94
4339 5283 5.506317 GCAGCACACAGTTCAAAGAAGTAAT 60.506 40.000 0.00 0.00 0.00 1.89
4341 5285 3.312421 GCAGCACACAGTTCAAAGAAGTA 59.688 43.478 0.00 0.00 0.00 2.24
4346 5290 3.969117 TTAGCAGCACACAGTTCAAAG 57.031 42.857 0.00 0.00 0.00 2.77
4350 5294 4.442073 CACAAAATTAGCAGCACACAGTTC 59.558 41.667 0.00 0.00 0.00 3.01
4359 5303 0.710017 GCGCACACAAAATTAGCAGC 59.290 50.000 0.30 0.00 0.00 5.25
4363 5307 3.796178 ACAACAAGCGCACACAAAATTAG 59.204 39.130 11.47 0.00 0.00 1.73
4366 5310 1.925847 CACAACAAGCGCACACAAAAT 59.074 42.857 11.47 0.00 0.00 1.82
4369 5313 0.523519 TTCACAACAAGCGCACACAA 59.476 45.000 11.47 0.00 0.00 3.33
4370 5314 0.179176 GTTCACAACAAGCGCACACA 60.179 50.000 11.47 0.00 0.00 3.72
4371 5315 0.865639 GGTTCACAACAAGCGCACAC 60.866 55.000 11.47 0.00 0.00 3.82
4372 5316 1.029408 AGGTTCACAACAAGCGCACA 61.029 50.000 11.47 0.00 0.00 4.57
4373 5317 0.941542 TAGGTTCACAACAAGCGCAC 59.058 50.000 11.47 0.00 0.00 5.34
4374 5318 1.890876 ATAGGTTCACAACAAGCGCA 58.109 45.000 11.47 0.00 0.00 6.09
4375 5319 2.989422 AATAGGTTCACAACAAGCGC 57.011 45.000 0.00 0.00 0.00 5.92
4376 5320 4.466828 CTGAAATAGGTTCACAACAAGCG 58.533 43.478 0.00 0.00 41.47 4.68
4419 5370 9.811995 CCATTGAGTATGAATCACAAATCAAAT 57.188 29.630 12.21 2.57 36.26 2.32
4420 5371 8.805175 ACCATTGAGTATGAATCACAAATCAAA 58.195 29.630 12.21 0.84 36.26 2.69
4424 5379 7.067859 CCTGACCATTGAGTATGAATCACAAAT 59.932 37.037 0.00 0.00 36.26 2.32
4425 5380 6.375174 CCTGACCATTGAGTATGAATCACAAA 59.625 38.462 0.00 0.00 36.26 2.83
4432 5387 7.194112 TGAATACCTGACCATTGAGTATGAA 57.806 36.000 0.00 0.00 36.26 2.57
4438 5393 8.915057 ATAGAAATGAATACCTGACCATTGAG 57.085 34.615 0.00 0.00 30.56 3.02
4439 5394 8.717717 AGATAGAAATGAATACCTGACCATTGA 58.282 33.333 0.00 0.00 30.56 2.57
4440 5395 8.781196 CAGATAGAAATGAATACCTGACCATTG 58.219 37.037 0.00 0.00 30.56 2.82
4445 5400 6.074088 CGTGCAGATAGAAATGAATACCTGAC 60.074 42.308 0.00 0.00 0.00 3.51
4446 5401 5.985530 CGTGCAGATAGAAATGAATACCTGA 59.014 40.000 0.00 0.00 0.00 3.86
4450 5405 6.477033 ACAGACGTGCAGATAGAAATGAATAC 59.523 38.462 0.00 0.00 0.00 1.89
4451 5406 6.573434 ACAGACGTGCAGATAGAAATGAATA 58.427 36.000 0.00 0.00 0.00 1.75
4453 5408 4.820897 ACAGACGTGCAGATAGAAATGAA 58.179 39.130 0.00 0.00 0.00 2.57
4460 5415 5.063944 AGCAATAAAACAGACGTGCAGATAG 59.936 40.000 0.00 0.00 34.44 2.08
4462 5417 3.753272 AGCAATAAAACAGACGTGCAGAT 59.247 39.130 0.00 0.00 34.44 2.90
4468 5437 3.939066 AGCCTAGCAATAAAACAGACGT 58.061 40.909 0.00 0.00 0.00 4.34
4469 5438 4.651994 CAAGCCTAGCAATAAAACAGACG 58.348 43.478 0.00 0.00 0.00 4.18
4478 5447 3.535561 GAACAGAGCAAGCCTAGCAATA 58.464 45.455 0.00 0.00 0.00 1.90
4501 5470 9.466497 ACTCACAAATGTCCAAAATAGATACAT 57.534 29.630 0.00 0.00 32.32 2.29
4503 5472 7.698130 GCACTCACAAATGTCCAAAATAGATAC 59.302 37.037 0.00 0.00 0.00 2.24
4505 5474 6.435277 AGCACTCACAAATGTCCAAAATAGAT 59.565 34.615 0.00 0.00 0.00 1.98
4506 5475 5.769662 AGCACTCACAAATGTCCAAAATAGA 59.230 36.000 0.00 0.00 0.00 1.98
4507 5476 5.860182 CAGCACTCACAAATGTCCAAAATAG 59.140 40.000 0.00 0.00 0.00 1.73
4518 5493 6.449698 CCAGAAATAAACAGCACTCACAAAT 58.550 36.000 0.00 0.00 0.00 2.32
4520 5495 4.278170 CCCAGAAATAAACAGCACTCACAA 59.722 41.667 0.00 0.00 0.00 3.33
4525 5500 3.160679 AGCCCAGAAATAAACAGCACT 57.839 42.857 0.00 0.00 0.00 4.40
4526 5501 3.578688 CAAGCCCAGAAATAAACAGCAC 58.421 45.455 0.00 0.00 0.00 4.40
4529 5504 2.415893 CCGCAAGCCCAGAAATAAACAG 60.416 50.000 0.00 0.00 0.00 3.16
4535 5510 1.678970 GGACCGCAAGCCCAGAAAT 60.679 57.895 0.00 0.00 0.00 2.17
4541 5516 1.134367 GAAAATAAGGACCGCAAGCCC 59.866 52.381 0.00 0.00 0.00 5.19
4544 5519 4.672801 GCTGAAGAAAATAAGGACCGCAAG 60.673 45.833 0.00 0.00 0.00 4.01
4545 5520 3.190535 GCTGAAGAAAATAAGGACCGCAA 59.809 43.478 0.00 0.00 0.00 4.85
4547 5522 2.223044 CGCTGAAGAAAATAAGGACCGC 60.223 50.000 0.00 0.00 0.00 5.68
4550 5525 6.535508 AGTGTATCGCTGAAGAAAATAAGGAC 59.464 38.462 0.00 0.00 0.00 3.85
4552 5527 6.535150 TCAGTGTATCGCTGAAGAAAATAAGG 59.465 38.462 10.01 0.00 46.10 2.69
4564 5539 1.454653 CATCGCATCAGTGTATCGCTG 59.545 52.381 4.22 4.22 42.60 5.18
4568 5543 5.469373 TCAAAACATCGCATCAGTGTATC 57.531 39.130 0.00 0.00 0.00 2.24
4580 5555 2.712057 AGCAGCCTTTCAAAACATCG 57.288 45.000 0.00 0.00 0.00 3.84
4581 5556 4.479619 CTGTAGCAGCCTTTCAAAACATC 58.520 43.478 0.00 0.00 0.00 3.06
4582 5557 4.510038 CTGTAGCAGCCTTTCAAAACAT 57.490 40.909 0.00 0.00 0.00 2.71
4583 5558 3.988379 CTGTAGCAGCCTTTCAAAACA 57.012 42.857 0.00 0.00 0.00 2.83
4603 5585 9.855021 AAAACTTAAGGACATACATAAACATGC 57.145 29.630 7.53 0.00 0.00 4.06
4630 5612 6.431543 TCCTCCGTGTGCTTTTGAATATTTTA 59.568 34.615 0.00 0.00 0.00 1.52
4636 5618 2.154462 CTCCTCCGTGTGCTTTTGAAT 58.846 47.619 0.00 0.00 0.00 2.57
4637 5619 1.593196 CTCCTCCGTGTGCTTTTGAA 58.407 50.000 0.00 0.00 0.00 2.69
4638 5620 0.250295 CCTCCTCCGTGTGCTTTTGA 60.250 55.000 0.00 0.00 0.00 2.69
4639 5621 1.856265 GCCTCCTCCGTGTGCTTTTG 61.856 60.000 0.00 0.00 0.00 2.44
4640 5622 1.600916 GCCTCCTCCGTGTGCTTTT 60.601 57.895 0.00 0.00 0.00 2.27
4641 5623 2.032681 GCCTCCTCCGTGTGCTTT 59.967 61.111 0.00 0.00 0.00 3.51
4642 5624 2.129555 ATTGCCTCCTCCGTGTGCTT 62.130 55.000 0.00 0.00 0.00 3.91
4643 5625 2.129555 AATTGCCTCCTCCGTGTGCT 62.130 55.000 0.00 0.00 0.00 4.40
4644 5626 1.675641 AATTGCCTCCTCCGTGTGC 60.676 57.895 0.00 0.00 0.00 4.57
4645 5627 0.321564 TCAATTGCCTCCTCCGTGTG 60.322 55.000 0.00 0.00 0.00 3.82
4646 5628 0.620556 ATCAATTGCCTCCTCCGTGT 59.379 50.000 0.00 0.00 0.00 4.49
4647 5629 1.019673 CATCAATTGCCTCCTCCGTG 58.980 55.000 0.00 0.00 0.00 4.94
4648 5630 0.911769 TCATCAATTGCCTCCTCCGT 59.088 50.000 0.00 0.00 0.00 4.69
4649 5631 1.590932 CTCATCAATTGCCTCCTCCG 58.409 55.000 0.00 0.00 0.00 4.63
4650 5632 1.978454 CCTCATCAATTGCCTCCTCC 58.022 55.000 0.00 0.00 0.00 4.30
4651 5633 1.316651 GCCTCATCAATTGCCTCCTC 58.683 55.000 0.00 0.00 0.00 3.71
4652 5634 0.106318 GGCCTCATCAATTGCCTCCT 60.106 55.000 0.00 0.00 40.77 3.69
4653 5635 0.396139 TGGCCTCATCAATTGCCTCC 60.396 55.000 3.32 0.00 44.32 4.30
4654 5636 1.340248 CATGGCCTCATCAATTGCCTC 59.660 52.381 3.32 0.00 44.32 4.70
4655 5637 1.342674 ACATGGCCTCATCAATTGCCT 60.343 47.619 3.32 0.00 44.32 4.75
4656 5638 1.117150 ACATGGCCTCATCAATTGCC 58.883 50.000 3.32 0.00 44.27 4.52
4657 5639 3.130869 TGTTACATGGCCTCATCAATTGC 59.869 43.478 3.32 0.00 0.00 3.56
4658 5640 4.987408 TGTTACATGGCCTCATCAATTG 57.013 40.909 3.32 0.00 0.00 2.32
4659 5641 4.142093 GCTTGTTACATGGCCTCATCAATT 60.142 41.667 3.32 0.00 0.00 2.32
4660 5642 3.382546 GCTTGTTACATGGCCTCATCAAT 59.617 43.478 3.32 0.00 0.00 2.57
4661 5643 2.754552 GCTTGTTACATGGCCTCATCAA 59.245 45.455 3.32 1.60 0.00 2.57
4662 5644 2.290832 TGCTTGTTACATGGCCTCATCA 60.291 45.455 3.32 0.00 0.00 3.07
4663 5645 2.357009 CTGCTTGTTACATGGCCTCATC 59.643 50.000 3.32 0.00 0.00 2.92
4664 5646 2.291153 ACTGCTTGTTACATGGCCTCAT 60.291 45.455 3.32 0.00 0.00 2.90
4665 5647 1.073763 ACTGCTTGTTACATGGCCTCA 59.926 47.619 3.32 0.00 0.00 3.86
4666 5648 1.826385 ACTGCTTGTTACATGGCCTC 58.174 50.000 3.32 0.00 0.00 4.70
4667 5649 2.292828 AACTGCTTGTTACATGGCCT 57.707 45.000 3.32 0.00 37.07 5.19
4668 5650 2.352715 GGAAACTGCTTGTTACATGGCC 60.353 50.000 0.00 0.00 38.03 5.36
4669 5651 2.295909 TGGAAACTGCTTGTTACATGGC 59.704 45.455 0.00 2.65 38.03 4.40
4670 5652 3.057315 CCTGGAAACTGCTTGTTACATGG 60.057 47.826 0.00 0.00 38.03 3.66
4671 5653 3.057315 CCCTGGAAACTGCTTGTTACATG 60.057 47.826 0.00 0.00 38.03 3.21
4672 5654 3.157087 CCCTGGAAACTGCTTGTTACAT 58.843 45.455 0.00 0.00 38.03 2.29
4673 5655 2.173782 TCCCTGGAAACTGCTTGTTACA 59.826 45.455 0.00 0.00 38.03 2.41
4674 5656 2.858745 TCCCTGGAAACTGCTTGTTAC 58.141 47.619 0.00 0.00 38.03 2.50
4675 5657 3.806949 ATCCCTGGAAACTGCTTGTTA 57.193 42.857 0.00 0.00 38.03 2.41
4676 5658 2.629617 CAATCCCTGGAAACTGCTTGTT 59.370 45.455 0.00 0.00 41.29 2.83
4677 5659 2.158475 TCAATCCCTGGAAACTGCTTGT 60.158 45.455 0.00 0.00 0.00 3.16
4678 5660 2.229784 GTCAATCCCTGGAAACTGCTTG 59.770 50.000 0.00 0.00 0.00 4.01
4679 5661 2.519013 GTCAATCCCTGGAAACTGCTT 58.481 47.619 0.00 0.00 0.00 3.91
4680 5662 1.611673 CGTCAATCCCTGGAAACTGCT 60.612 52.381 0.00 0.00 0.00 4.24
4681 5663 0.804989 CGTCAATCCCTGGAAACTGC 59.195 55.000 0.00 0.00 0.00 4.40
4682 5664 2.472695 TCGTCAATCCCTGGAAACTG 57.527 50.000 0.00 0.00 0.00 3.16
4683 5665 2.372172 AGTTCGTCAATCCCTGGAAACT 59.628 45.455 0.00 0.00 0.00 2.66
4684 5666 2.742589 GAGTTCGTCAATCCCTGGAAAC 59.257 50.000 0.00 0.00 0.00 2.78
4685 5667 2.370519 TGAGTTCGTCAATCCCTGGAAA 59.629 45.455 0.00 0.00 29.64 3.13
4686 5668 1.974957 TGAGTTCGTCAATCCCTGGAA 59.025 47.619 0.00 0.00 29.64 3.53
4687 5669 1.639722 TGAGTTCGTCAATCCCTGGA 58.360 50.000 0.00 0.00 29.64 3.86
4688 5670 2.289694 ACTTGAGTTCGTCAATCCCTGG 60.290 50.000 0.00 0.00 44.44 4.45
4689 5671 3.045601 ACTTGAGTTCGTCAATCCCTG 57.954 47.619 0.00 0.00 44.44 4.45
4690 5672 4.039973 TGTTACTTGAGTTCGTCAATCCCT 59.960 41.667 0.00 0.00 44.44 4.20
4691 5673 4.312443 TGTTACTTGAGTTCGTCAATCCC 58.688 43.478 0.00 0.00 44.44 3.85
4692 5674 5.917541 TTGTTACTTGAGTTCGTCAATCC 57.082 39.130 0.00 0.00 44.44 3.01
4693 5675 7.095607 ACAGATTGTTACTTGAGTTCGTCAATC 60.096 37.037 0.00 0.00 44.44 2.67
4694 5676 6.706270 ACAGATTGTTACTTGAGTTCGTCAAT 59.294 34.615 0.00 0.00 44.44 2.57
4695 5677 6.019075 CACAGATTGTTACTTGAGTTCGTCAA 60.019 38.462 0.00 0.00 43.26 3.18
4696 5678 5.462068 CACAGATTGTTACTTGAGTTCGTCA 59.538 40.000 0.00 0.00 0.00 4.35
4697 5679 5.690409 TCACAGATTGTTACTTGAGTTCGTC 59.310 40.000 0.00 0.00 0.00 4.20
4698 5680 5.462398 GTCACAGATTGTTACTTGAGTTCGT 59.538 40.000 0.00 0.00 0.00 3.85
4699 5681 5.107453 GGTCACAGATTGTTACTTGAGTTCG 60.107 44.000 0.00 0.00 0.00 3.95
4700 5682 5.758296 TGGTCACAGATTGTTACTTGAGTTC 59.242 40.000 0.00 0.00 0.00 3.01
4701 5683 5.680619 TGGTCACAGATTGTTACTTGAGTT 58.319 37.500 0.00 0.00 0.00 3.01
4702 5684 5.290493 TGGTCACAGATTGTTACTTGAGT 57.710 39.130 0.00 0.00 0.00 3.41
4703 5685 6.618287 TTTGGTCACAGATTGTTACTTGAG 57.382 37.500 0.00 0.00 0.00 3.02
4704 5686 7.581213 ATTTTGGTCACAGATTGTTACTTGA 57.419 32.000 0.00 0.00 0.00 3.02
4705 5687 8.567948 AGTATTTTGGTCACAGATTGTTACTTG 58.432 33.333 0.00 0.00 0.00 3.16
4706 5688 8.691661 AGTATTTTGGTCACAGATTGTTACTT 57.308 30.769 0.00 0.00 0.00 2.24
4707 5689 8.157476 AGAGTATTTTGGTCACAGATTGTTACT 58.843 33.333 0.00 0.00 0.00 2.24
4708 5690 8.324163 AGAGTATTTTGGTCACAGATTGTTAC 57.676 34.615 0.00 0.00 0.00 2.50
4709 5691 8.375506 AGAGAGTATTTTGGTCACAGATTGTTA 58.624 33.333 0.00 0.00 0.00 2.41
4710 5692 7.227156 AGAGAGTATTTTGGTCACAGATTGTT 58.773 34.615 0.00 0.00 0.00 2.83
4711 5693 6.773638 AGAGAGTATTTTGGTCACAGATTGT 58.226 36.000 0.00 0.00 0.00 2.71
4712 5694 7.493971 CCTAGAGAGTATTTTGGTCACAGATTG 59.506 40.741 0.00 0.00 0.00 2.67
4713 5695 7.400339 TCCTAGAGAGTATTTTGGTCACAGATT 59.600 37.037 0.00 0.00 0.00 2.40
4714 5696 6.897966 TCCTAGAGAGTATTTTGGTCACAGAT 59.102 38.462 0.00 0.00 0.00 2.90
4715 5697 6.253758 TCCTAGAGAGTATTTTGGTCACAGA 58.746 40.000 0.00 0.00 0.00 3.41
4716 5698 6.531503 TCCTAGAGAGTATTTTGGTCACAG 57.468 41.667 0.00 0.00 0.00 3.66
4717 5699 6.531503 CTCCTAGAGAGTATTTTGGTCACA 57.468 41.667 0.00 0.00 37.87 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.