Multiple sequence alignment - TraesCS2A01G499200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G499200 chr2A 100.000 5801 0 0 1 5801 729133550 729127750 0.000000e+00 10713.0
1 TraesCS2A01G499200 chr2A 89.443 521 54 1 4431 4951 729080634 729080115 0.000000e+00 656.0
2 TraesCS2A01G499200 chr2A 92.541 362 27 0 4032 4393 729080996 729080635 2.400000e-143 520.0
3 TraesCS2A01G499200 chr2A 88.618 369 18 9 5376 5721 729069380 729069013 1.490000e-115 427.0
4 TraesCS2A01G499200 chr2A 86.063 287 24 12 5027 5301 729069667 729069385 1.580000e-75 294.0
5 TraesCS2A01G499200 chr2A 88.889 99 6 5 386 484 161948584 161948677 3.670000e-22 117.0
6 TraesCS2A01G499200 chr2D 93.734 3128 117 21 1882 4986 594474737 594471666 0.000000e+00 4617.0
7 TraesCS2A01G499200 chr2D 86.269 1391 62 41 480 1797 594476069 594474735 0.000000e+00 1391.0
8 TraesCS2A01G499200 chr2D 81.203 532 53 30 5047 5564 594460453 594459955 9.120000e-103 385.0
9 TraesCS2A01G499200 chr2D 94.545 110 6 0 5612 5721 594459947 594459838 2.780000e-38 171.0
10 TraesCS2A01G499200 chr2D 89.831 118 10 2 1767 1883 555221074 555221190 3.620000e-32 150.0
11 TraesCS2A01G499200 chr2B 90.948 1889 124 18 3123 4986 721923449 721921583 0.000000e+00 2497.0
12 TraesCS2A01G499200 chr2B 85.421 926 71 32 1900 2809 721924331 721923454 0.000000e+00 904.0
13 TraesCS2A01G499200 chr2B 93.398 515 34 0 1281 1795 721924856 721924342 0.000000e+00 763.0
14 TraesCS2A01G499200 chr2B 86.557 424 38 5 5047 5455 721913513 721913094 3.190000e-122 449.0
15 TraesCS2A01G499200 chr2B 97.826 92 1 1 1792 1883 793154474 793154564 2.160000e-34 158.0
16 TraesCS2A01G499200 chr2B 86.364 132 17 1 1025 1155 721924991 721924860 6.060000e-30 143.0
17 TraesCS2A01G499200 chr2B 86.364 110 8 7 389 497 354879121 354879224 4.750000e-21 113.0
18 TraesCS2A01G499200 chr2B 92.453 53 4 0 1044 1096 721924996 721924944 6.230000e-10 76.8
19 TraesCS2A01G499200 chr5B 76.015 542 69 30 2291 2803 187198665 187199174 2.100000e-54 224.0
20 TraesCS2A01G499200 chrUn 87.647 170 18 2 2574 2742 20497621 20497788 1.650000e-45 195.0
21 TraesCS2A01G499200 chr7B 98.889 90 1 0 1791 1880 389007090 389007179 1.670000e-35 161.0
22 TraesCS2A01G499200 chr3A 95.146 103 4 1 1788 1890 638994349 638994450 1.670000e-35 161.0
23 TraesCS2A01G499200 chr3A 95.833 96 4 0 1787 1882 655640621 655640716 7.780000e-34 156.0
24 TraesCS2A01G499200 chr3A 88.889 99 7 1 390 488 427713651 427713557 1.020000e-22 119.0
25 TraesCS2A01G499200 chr1A 95.000 100 4 1 1781 1880 548742992 548743090 7.780000e-34 156.0
26 TraesCS2A01G499200 chr7A 94.949 99 4 1 1787 1884 12748979 12749077 2.800000e-33 154.0
27 TraesCS2A01G499200 chr7A 93.269 104 6 1 1777 1879 86235274 86235171 1.010000e-32 152.0
28 TraesCS2A01G499200 chr3D 94.059 101 6 0 1782 1882 390197967 390198067 2.800000e-33 154.0
29 TraesCS2A01G499200 chr4B 89.216 102 5 2 391 490 652887567 652887470 7.890000e-24 122.0
30 TraesCS2A01G499200 chr7D 89.109 101 5 5 383 481 195626086 195626182 2.840000e-23 121.0
31 TraesCS2A01G499200 chr7D 88.462 104 7 2 389 491 545608461 545608362 2.840000e-23 121.0
32 TraesCS2A01G499200 chr6D 87.037 108 9 2 385 491 104147588 104147691 3.670000e-22 117.0
33 TraesCS2A01G499200 chr6D 86.364 110 8 7 382 488 196358005 196357900 4.750000e-21 113.0
34 TraesCS2A01G499200 chr4D 88.889 99 6 2 393 490 119412699 119412793 3.670000e-22 117.0
35 TraesCS2A01G499200 chr5D 82.653 98 6 8 16 104 551761328 551761423 6.230000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G499200 chr2A 729127750 729133550 5800 True 10713.00 10713 100.0000 1 5801 1 chr2A.!!$R1 5800
1 TraesCS2A01G499200 chr2A 729080115 729080996 881 True 588.00 656 90.9920 4032 4951 2 chr2A.!!$R3 919
2 TraesCS2A01G499200 chr2A 729069013 729069667 654 True 360.50 427 87.3405 5027 5721 2 chr2A.!!$R2 694
3 TraesCS2A01G499200 chr2D 594471666 594476069 4403 True 3004.00 4617 90.0015 480 4986 2 chr2D.!!$R2 4506
4 TraesCS2A01G499200 chr2D 594459838 594460453 615 True 278.00 385 87.8740 5047 5721 2 chr2D.!!$R1 674
5 TraesCS2A01G499200 chr2B 721921583 721924996 3413 True 876.76 2497 89.7168 1025 4986 5 chr2B.!!$R2 3961
6 TraesCS2A01G499200 chr5B 187198665 187199174 509 False 224.00 224 76.0150 2291 2803 1 chr5B.!!$F1 512

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
709 744 0.034186 GCCCTTGTGTGATGGATCCA 60.034 55.0 18.88 18.88 0.00 3.41 F
956 1003 0.035458 AAAGTCGAGGTTGCTCCAGG 59.965 55.0 0.00 0.00 39.02 4.45 F
1553 1652 0.036010 CTGGAACCGGAGCTTGACAT 60.036 55.0 9.46 0.00 0.00 3.06 F
1554 1653 0.036388 TGGAACCGGAGCTTGACATC 60.036 55.0 9.46 0.00 0.00 3.06 F
1720 1819 0.815615 GATGGTGGTCGAGGGATTGC 60.816 60.0 0.00 0.00 0.00 3.56 F
2387 2508 0.821301 TCACATCAAAACAGGCGCCA 60.821 50.0 31.54 5.89 0.00 5.69 F
3720 3883 0.961019 TGCTCCCATTGCACTTTCAC 59.039 50.0 0.00 0.00 35.31 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1683 1782 0.249868 TCCCGGCTGCTATTGATTCG 60.250 55.000 0.00 0.00 0.00 3.34 R
2901 3047 0.779997 AGGAAAGCACCCTGGTTCAT 59.220 50.000 0.00 0.00 37.04 2.57 R
2956 3102 2.425143 TGGGGTTCAGCTGAATGATC 57.575 50.000 30.65 17.91 36.33 2.92 R
3551 3714 3.071023 TCTTCCCGGCATTTGTCCTATAG 59.929 47.826 0.00 0.00 0.00 1.31 R
3590 3753 8.012241 GCTTTTAGTGAGTCTACAAATTCTGTG 58.988 37.037 0.00 0.00 39.20 3.66 R
4384 4561 1.028868 GTGGCCTGAATGGACTGCTC 61.029 60.000 3.32 0.00 46.68 4.26 R
4996 5175 0.041663 AAATACACACACGCGCACAC 60.042 50.000 5.73 0.00 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.729805 TTTTTCTAAACTTTCCATGTGCAATT 57.270 26.923 0.00 0.00 0.00 2.32
43 44 8.729805 TTTTCTAAACTTTCCATGTGCAATTT 57.270 26.923 0.00 0.00 0.00 1.82
44 45 8.729805 TTTCTAAACTTTCCATGTGCAATTTT 57.270 26.923 0.00 0.00 0.00 1.82
45 46 8.729805 TTCTAAACTTTCCATGTGCAATTTTT 57.270 26.923 0.00 0.00 0.00 1.94
68 69 8.658840 TTTTTATTATGGGTAGCCTGACTTTT 57.341 30.769 13.11 0.00 0.00 2.27
69 70 8.658840 TTTTATTATGGGTAGCCTGACTTTTT 57.341 30.769 13.11 0.00 0.00 1.94
111 112 9.883142 TTTTGTCTTCCAAAACATGAAACTTAT 57.117 25.926 0.00 0.00 45.68 1.73
112 113 9.883142 TTTGTCTTCCAAAACATGAAACTTATT 57.117 25.926 0.00 0.00 40.05 1.40
113 114 9.528018 TTGTCTTCCAAAACATGAAACTTATTC 57.472 29.630 0.00 0.00 0.00 1.75
114 115 8.690884 TGTCTTCCAAAACATGAAACTTATTCA 58.309 29.630 0.00 0.00 0.00 2.57
115 116 9.696917 GTCTTCCAAAACATGAAACTTATTCAT 57.303 29.630 0.00 0.00 39.53 2.57
162 163 9.941325 TTTTTACATTCTCATGTGGCAATTTAT 57.059 25.926 0.00 0.00 43.92 1.40
163 164 9.941325 TTTTACATTCTCATGTGGCAATTTATT 57.059 25.926 0.00 0.00 43.92 1.40
407 408 7.422878 GTTGTAAACTACTCCCTCTTGAAAG 57.577 40.000 0.00 0.00 45.32 2.62
408 409 6.989155 TGTAAACTACTCCCTCTTGAAAGA 57.011 37.500 0.00 0.00 0.00 2.52
409 410 7.369551 TGTAAACTACTCCCTCTTGAAAGAA 57.630 36.000 0.00 0.00 34.03 2.52
410 411 7.798071 TGTAAACTACTCCCTCTTGAAAGAAA 58.202 34.615 0.00 0.00 34.03 2.52
411 412 8.437575 TGTAAACTACTCCCTCTTGAAAGAAAT 58.562 33.333 0.00 0.00 34.03 2.17
412 413 9.939802 GTAAACTACTCCCTCTTGAAAGAAATA 57.060 33.333 0.00 0.00 34.03 1.40
419 420 7.990314 ACTCCCTCTTGAAAGAAATATAAGAGC 59.010 37.037 0.00 0.00 41.71 4.09
420 421 6.986817 TCCCTCTTGAAAGAAATATAAGAGCG 59.013 38.462 0.00 0.00 41.71 5.03
421 422 6.763610 CCCTCTTGAAAGAAATATAAGAGCGT 59.236 38.462 0.00 0.00 41.71 5.07
422 423 7.281100 CCCTCTTGAAAGAAATATAAGAGCGTT 59.719 37.037 0.00 0.00 41.71 4.84
423 424 8.669243 CCTCTTGAAAGAAATATAAGAGCGTTT 58.331 33.333 0.00 0.00 41.71 3.60
438 439 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
439 440 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
453 454 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
454 455 8.503458 ACTACTTTAGTGATCTAAACGCTCTA 57.497 34.615 0.00 0.00 40.05 2.43
455 456 8.954350 ACTACTTTAGTGATCTAAACGCTCTAA 58.046 33.333 0.00 0.00 40.05 2.10
456 457 9.224058 CTACTTTAGTGATCTAAACGCTCTAAC 57.776 37.037 0.00 0.00 40.05 2.34
457 458 7.828712 ACTTTAGTGATCTAAACGCTCTAACT 58.171 34.615 0.00 0.00 40.05 2.24
458 459 8.305317 ACTTTAGTGATCTAAACGCTCTAACTT 58.695 33.333 0.00 0.00 40.05 2.66
459 460 9.784680 CTTTAGTGATCTAAACGCTCTAACTTA 57.215 33.333 0.00 0.00 40.05 2.24
472 473 9.455847 AACGCTCTAACTTATATTAGTTTACGG 57.544 33.333 12.02 3.33 39.08 4.02
473 474 8.840321 ACGCTCTAACTTATATTAGTTTACGGA 58.160 33.333 12.02 5.99 39.08 4.69
474 475 9.327529 CGCTCTAACTTATATTAGTTTACGGAG 57.672 37.037 12.02 13.76 39.08 4.63
475 476 9.623350 GCTCTAACTTATATTAGTTTACGGAGG 57.377 37.037 12.02 0.91 39.08 4.30
558 559 3.425162 AAACTGCTATATGGGCCTAGC 57.575 47.619 14.59 14.59 40.60 3.42
597 605 3.090532 GGCCAGGATCGACCCCTT 61.091 66.667 0.00 0.00 40.05 3.95
601 609 3.470888 AGGATCGACCCCTTGGCG 61.471 66.667 0.00 0.00 40.05 5.69
603 611 3.467226 GATCGACCCCTTGGCGGA 61.467 66.667 0.00 0.00 33.68 5.54
606 614 4.891727 CGACCCCTTGGCGGATCG 62.892 72.222 2.02 0.00 35.71 3.69
608 616 3.735037 GACCCCTTGGCGGATCGAC 62.735 68.421 0.00 0.00 34.27 4.20
628 660 0.189822 CCCAAGGGTCCCCAGAAAAA 59.810 55.000 3.51 0.00 38.92 1.94
678 713 0.741221 GCGGCGGTGAAGAGAAAGAT 60.741 55.000 9.78 0.00 0.00 2.40
681 716 2.275318 GGCGGTGAAGAGAAAGATGAG 58.725 52.381 0.00 0.00 0.00 2.90
684 719 3.257393 CGGTGAAGAGAAAGATGAGTGG 58.743 50.000 0.00 0.00 0.00 4.00
685 720 3.306364 CGGTGAAGAGAAAGATGAGTGGT 60.306 47.826 0.00 0.00 0.00 4.16
709 744 0.034186 GCCCTTGTGTGATGGATCCA 60.034 55.000 18.88 18.88 0.00 3.41
723 758 2.642311 TGGATCCACTAAGAACTGGCAA 59.358 45.455 11.44 0.00 0.00 4.52
764 811 0.253044 AGGATTCGTGGGTGTCATGG 59.747 55.000 0.00 0.00 33.31 3.66
796 843 1.358046 GAAGCGCAATGGCATCTCC 59.642 57.895 11.47 0.00 41.24 3.71
797 844 2.068277 GAAGCGCAATGGCATCTCCC 62.068 60.000 11.47 0.00 41.24 4.30
798 845 2.517875 GCGCAATGGCATCTCCCT 60.518 61.111 0.30 0.00 41.24 4.20
799 846 2.550101 GCGCAATGGCATCTCCCTC 61.550 63.158 0.30 0.00 41.24 4.30
800 847 1.153107 CGCAATGGCATCTCCCTCA 60.153 57.895 0.00 0.00 41.24 3.86
801 848 1.164662 CGCAATGGCATCTCCCTCAG 61.165 60.000 0.00 0.00 41.24 3.35
802 849 0.822532 GCAATGGCATCTCCCTCAGG 60.823 60.000 0.00 0.00 40.72 3.86
803 850 0.841961 CAATGGCATCTCCCTCAGGA 59.158 55.000 0.00 0.00 41.08 3.86
817 864 2.502295 CTCAGGAAAGCTGAAGTTGCT 58.498 47.619 0.00 0.00 43.32 3.91
818 865 2.483491 CTCAGGAAAGCTGAAGTTGCTC 59.517 50.000 0.00 0.00 40.22 4.26
857 904 2.725008 GACCCGGAGAGCTGATCG 59.275 66.667 0.73 0.00 0.00 3.69
869 916 0.107703 GCTGATCGTGGGGATGTTCA 60.108 55.000 0.00 0.00 34.82 3.18
925 972 3.039202 GACGGCCACAAGATTGCGG 62.039 63.158 2.24 0.00 33.57 5.69
956 1003 0.035458 AAAGTCGAGGTTGCTCCAGG 59.965 55.000 0.00 0.00 39.02 4.45
957 1004 0.832135 AAGTCGAGGTTGCTCCAGGA 60.832 55.000 0.00 0.00 39.02 3.86
958 1005 0.616111 AGTCGAGGTTGCTCCAGGAT 60.616 55.000 0.00 0.00 39.02 3.24
959 1006 1.112113 GTCGAGGTTGCTCCAGGATA 58.888 55.000 0.00 0.00 39.02 2.59
960 1007 1.480954 GTCGAGGTTGCTCCAGGATAA 59.519 52.381 0.00 0.00 39.02 1.75
961 1008 2.093658 GTCGAGGTTGCTCCAGGATAAA 60.094 50.000 0.00 0.00 39.02 1.40
962 1009 2.168521 TCGAGGTTGCTCCAGGATAAAG 59.831 50.000 0.00 0.00 39.02 1.85
963 1010 2.168521 CGAGGTTGCTCCAGGATAAAGA 59.831 50.000 0.00 0.00 39.02 2.52
964 1011 3.181461 CGAGGTTGCTCCAGGATAAAGAT 60.181 47.826 0.00 0.00 39.02 2.40
965 1012 4.384940 GAGGTTGCTCCAGGATAAAGATC 58.615 47.826 0.00 0.00 39.02 2.75
1008 1056 3.197790 CCTTGTGCGATGGAGCCG 61.198 66.667 0.00 0.00 36.02 5.52
1009 1057 3.197790 CTTGTGCGATGGAGCCGG 61.198 66.667 0.00 0.00 36.02 6.13
1038 1086 4.933064 GACGGATCCGGCGAGCTG 62.933 72.222 35.87 8.28 44.69 4.24
1123 1219 0.946221 AACGCTGAAGTTGCTCCTCG 60.946 55.000 0.00 0.00 32.39 4.63
1184 1281 2.032550 GTCGGTTGAGGAATATCGACGA 59.967 50.000 0.00 0.00 37.76 4.20
1192 1289 1.499049 GAATATCGACGACCAAGGCC 58.501 55.000 0.00 0.00 0.00 5.19
1221 1318 3.793144 GCGCTGCGGGAGTTTCAG 61.793 66.667 24.61 0.00 0.00 3.02
1222 1319 3.121030 CGCTGCGGGAGTTTCAGG 61.121 66.667 15.40 0.00 0.00 3.86
1224 1321 3.121030 CTGCGGGAGTTTCAGGCG 61.121 66.667 0.00 0.00 0.00 5.52
1239 1336 0.534427 AGGCGTGGATCATGCATCAG 60.534 55.000 13.17 0.00 46.93 2.90
1240 1337 1.281960 GCGTGGATCATGCATCAGC 59.718 57.895 0.00 0.00 44.78 4.26
1263 1360 1.062685 ACAGTCGAGCATAGACGCG 59.937 57.895 3.53 3.53 45.93 6.01
1307 1404 1.134098 GGGAATCGAAGATCTGGGCAA 60.134 52.381 0.00 0.00 45.12 4.52
1308 1405 2.216898 GGAATCGAAGATCTGGGCAAG 58.783 52.381 0.00 0.00 45.12 4.01
1365 1462 1.786937 TGGTGGTGGAATTTGCACTT 58.213 45.000 18.73 0.00 38.83 3.16
1368 1465 1.606668 GTGGTGGAATTTGCACTTCGA 59.393 47.619 18.73 0.94 38.83 3.71
1370 1467 2.151202 GGTGGAATTTGCACTTCGAGA 58.849 47.619 18.73 0.00 38.83 4.04
1382 1479 6.189677 TGCACTTCGAGAAAAAGAAAAGAA 57.810 33.333 0.00 0.00 0.00 2.52
1383 1480 6.616947 TGCACTTCGAGAAAAAGAAAAGAAA 58.383 32.000 0.00 0.00 0.00 2.52
1385 1482 6.747739 GCACTTCGAGAAAAAGAAAAGAAAGT 59.252 34.615 0.00 0.00 0.00 2.66
1389 1486 7.016361 TCGAGAAAAAGAAAAGAAAGTGGAG 57.984 36.000 0.00 0.00 0.00 3.86
1403 1500 0.612744 GTGGAGCAGGAAGAGAAGCT 59.387 55.000 0.00 0.00 40.60 3.74
1533 1630 4.616143 GCAAGTATCGATATGCTTCGGAGA 60.616 45.833 19.23 0.00 36.06 3.71
1553 1652 0.036010 CTGGAACCGGAGCTTGACAT 60.036 55.000 9.46 0.00 0.00 3.06
1554 1653 0.036388 TGGAACCGGAGCTTGACATC 60.036 55.000 9.46 0.00 0.00 3.06
1579 1678 2.954989 CTGAGATCGATGGAGGTGAAGA 59.045 50.000 0.54 0.00 0.00 2.87
1657 1756 2.836981 CTGAAGGTTGATGAGGAGGAGT 59.163 50.000 0.00 0.00 0.00 3.85
1683 1782 4.081807 AGCAAGGATGAAGAAGCAAAATCC 60.082 41.667 0.00 0.00 37.63 3.01
1720 1819 0.815615 GATGGTGGTCGAGGGATTGC 60.816 60.000 0.00 0.00 0.00 3.56
1722 1821 1.002624 GGTGGTCGAGGGATTGCAA 60.003 57.895 0.00 0.00 0.00 4.08
1795 1894 7.175467 TCGAGGACATGAGTAAGTAAACAACTA 59.825 37.037 0.00 0.00 37.50 2.24
1796 1895 7.272948 CGAGGACATGAGTAAGTAAACAACTAC 59.727 40.741 0.00 0.00 37.50 2.73
1797 1896 8.191534 AGGACATGAGTAAGTAAACAACTACT 57.808 34.615 0.00 0.00 37.50 2.57
1798 1897 8.305317 AGGACATGAGTAAGTAAACAACTACTC 58.695 37.037 0.00 0.00 37.50 2.59
1799 1898 7.544915 GGACATGAGTAAGTAAACAACTACTCC 59.455 40.741 0.00 0.00 37.50 3.85
1800 1899 7.384477 ACATGAGTAAGTAAACAACTACTCCC 58.616 38.462 0.00 0.00 37.50 4.30
1801 1900 7.234988 ACATGAGTAAGTAAACAACTACTCCCT 59.765 37.037 0.00 0.00 37.50 4.20
1802 1901 7.224522 TGAGTAAGTAAACAACTACTCCCTC 57.775 40.000 5.82 0.00 37.50 4.30
1803 1902 7.008941 TGAGTAAGTAAACAACTACTCCCTCT 58.991 38.462 5.82 0.00 37.50 3.69
1804 1903 7.039923 TGAGTAAGTAAACAACTACTCCCTCTG 60.040 40.741 5.82 0.00 37.50 3.35
1805 1904 6.781507 AGTAAGTAAACAACTACTCCCTCTGT 59.218 38.462 0.00 0.00 37.50 3.41
1806 1905 7.946776 AGTAAGTAAACAACTACTCCCTCTGTA 59.053 37.037 0.00 0.00 37.50 2.74
1807 1906 7.607615 AAGTAAACAACTACTCCCTCTGTAA 57.392 36.000 0.00 0.00 37.50 2.41
1808 1907 7.607615 AGTAAACAACTACTCCCTCTGTAAA 57.392 36.000 0.00 0.00 36.36 2.01
1809 1908 7.440198 AGTAAACAACTACTCCCTCTGTAAAC 58.560 38.462 0.00 0.00 36.36 2.01
1810 1909 6.496144 AAACAACTACTCCCTCTGTAAACT 57.504 37.500 0.00 0.00 0.00 2.66
1811 1910 7.607615 AAACAACTACTCCCTCTGTAAACTA 57.392 36.000 0.00 0.00 0.00 2.24
1812 1911 7.607615 AACAACTACTCCCTCTGTAAACTAA 57.392 36.000 0.00 0.00 0.00 2.24
1813 1912 7.793948 ACAACTACTCCCTCTGTAAACTAAT 57.206 36.000 0.00 0.00 0.00 1.73
1814 1913 8.890410 ACAACTACTCCCTCTGTAAACTAATA 57.110 34.615 0.00 0.00 0.00 0.98
1815 1914 9.490083 ACAACTACTCCCTCTGTAAACTAATAT 57.510 33.333 0.00 0.00 0.00 1.28
1821 1920 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
1822 1921 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
1823 1922 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
1824 1923 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
1825 1924 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
1873 1972 7.704789 ACGCTTTTATATTAGTTTACGGAGG 57.295 36.000 0.00 0.00 0.00 4.30
1874 1973 7.491682 ACGCTTTTATATTAGTTTACGGAGGA 58.508 34.615 0.00 0.00 0.00 3.71
1875 1974 7.981225 ACGCTTTTATATTAGTTTACGGAGGAA 59.019 33.333 0.00 0.00 0.00 3.36
1876 1975 8.485591 CGCTTTTATATTAGTTTACGGAGGAAG 58.514 37.037 0.00 0.00 0.00 3.46
1877 1976 9.322773 GCTTTTATATTAGTTTACGGAGGAAGT 57.677 33.333 0.00 0.00 0.00 3.01
1897 1996 5.591643 AGTACTTACACACATGCTTTTCG 57.408 39.130 0.00 0.00 0.00 3.46
1948 2047 6.136541 AGTTTGTTTTTCTACTTGCTCCAG 57.863 37.500 0.00 0.00 0.00 3.86
1993 2101 6.949352 CAAACCTAATTGCATCCACTCTAT 57.051 37.500 0.00 0.00 0.00 1.98
2024 2132 5.388408 AACCCTTCGTTCAGTAACTAGAG 57.612 43.478 0.00 0.00 33.15 2.43
2025 2133 4.660168 ACCCTTCGTTCAGTAACTAGAGA 58.340 43.478 0.00 0.00 33.15 3.10
2026 2134 5.075493 ACCCTTCGTTCAGTAACTAGAGAA 58.925 41.667 0.00 0.00 33.15 2.87
2027 2135 5.715753 ACCCTTCGTTCAGTAACTAGAGAAT 59.284 40.000 0.00 0.00 33.15 2.40
2028 2136 6.037098 CCCTTCGTTCAGTAACTAGAGAATG 58.963 44.000 0.00 0.00 33.15 2.67
2029 2137 6.350277 CCCTTCGTTCAGTAACTAGAGAATGT 60.350 42.308 0.00 0.00 33.15 2.71
2030 2138 7.091443 CCTTCGTTCAGTAACTAGAGAATGTT 58.909 38.462 0.00 0.00 33.15 2.71
2031 2139 7.599245 CCTTCGTTCAGTAACTAGAGAATGTTT 59.401 37.037 0.00 0.00 33.15 2.83
2032 2140 8.882415 TTCGTTCAGTAACTAGAGAATGTTTT 57.118 30.769 0.00 0.00 33.15 2.43
2033 2141 8.516811 TCGTTCAGTAACTAGAGAATGTTTTC 57.483 34.615 0.00 0.00 33.15 2.29
2034 2142 8.358148 TCGTTCAGTAACTAGAGAATGTTTTCT 58.642 33.333 0.00 0.00 37.91 2.52
2035 2143 8.979574 CGTTCAGTAACTAGAGAATGTTTTCTT 58.020 33.333 0.00 0.00 36.57 2.52
2072 2180 8.405418 AGAGAATGTTTGCATTGCAGATATAT 57.595 30.769 11.76 4.19 44.61 0.86
2073 2181 9.511272 AGAGAATGTTTGCATTGCAGATATATA 57.489 29.630 11.76 0.00 44.61 0.86
2178 2289 9.297037 ACAAATAAATTGGCTACTGTAAACTCT 57.703 29.630 0.00 0.00 43.66 3.24
2387 2508 0.821301 TCACATCAAAACAGGCGCCA 60.821 50.000 31.54 5.89 0.00 5.69
2548 2670 6.420455 GAACGTTTTGTCTAGCAAATGTTC 57.580 37.500 23.11 23.11 45.38 3.18
2626 2762 2.949177 TTACAGCACCCTCACACATT 57.051 45.000 0.00 0.00 0.00 2.71
2701 2841 5.649395 CAGGAACAAAGAGCAATGGAAGATA 59.351 40.000 0.00 0.00 0.00 1.98
2710 2850 5.772672 AGAGCAATGGAAGATAGACGACTAT 59.227 40.000 7.13 7.13 41.41 2.12
2901 3047 6.248569 AGAAGAAGAGGGAAACAAACTACA 57.751 37.500 0.00 0.00 0.00 2.74
2956 3102 7.316393 TGTGATAGGACCCCAAAAGATATAG 57.684 40.000 0.00 0.00 0.00 1.31
3049 3195 5.064707 GCGGATAAAGTAGAATTGCAACTGA 59.935 40.000 0.00 0.00 0.00 3.41
3053 3199 8.462016 GGATAAAGTAGAATTGCAACTGAATGT 58.538 33.333 0.00 0.00 0.00 2.71
3054 3200 9.495754 GATAAAGTAGAATTGCAACTGAATGTC 57.504 33.333 0.00 0.00 0.00 3.06
3099 3245 4.617995 GCAATAACATTGGCACAGCAGTTA 60.618 41.667 0.00 0.00 42.39 2.24
3100 3246 5.468592 CAATAACATTGGCACAGCAGTTAA 58.531 37.500 0.00 0.00 42.39 2.01
3131 3277 5.978919 TGAGTTGATTGCTTCATTTGTGAAC 59.021 36.000 0.00 0.00 33.34 3.18
3227 3379 6.936900 ACCAATCTGAGTGTATATTATGCACC 59.063 38.462 17.88 11.68 45.45 5.01
3232 3384 7.161404 TCTGAGTGTATATTATGCACCATTCC 58.839 38.462 17.88 6.59 45.45 3.01
3331 3488 2.955660 TGTTTTCTGAACATGTGGGTCC 59.044 45.455 0.00 0.00 0.00 4.46
3352 3509 4.279922 TCCGAGTCTACTTGTTGTTCATGA 59.720 41.667 0.00 0.00 0.00 3.07
3411 3571 7.719871 ACTATAGCTGAAACTTGAGAAGGTA 57.280 36.000 0.00 0.00 0.00 3.08
3551 3714 6.354130 TCAGTGTACTTAAATAAGGGGATGC 58.646 40.000 5.27 0.00 37.62 3.91
3590 3753 6.141462 CGGGAAGATTGTACTCGATACTTAC 58.859 44.000 0.00 0.00 34.56 2.34
3639 3802 2.496899 ACCTTCCACATAGGCAACAG 57.503 50.000 0.00 0.00 36.17 3.16
3653 3816 9.953565 ACATAGGCAACAGAAGTTTAATTAGTA 57.046 29.630 0.00 0.00 35.28 1.82
3718 3881 1.615392 ACTTGCTCCCATTGCACTTTC 59.385 47.619 0.00 0.00 40.40 2.62
3719 3882 1.614903 CTTGCTCCCATTGCACTTTCA 59.385 47.619 0.00 0.00 40.40 2.69
3720 3883 0.961019 TGCTCCCATTGCACTTTCAC 59.039 50.000 0.00 0.00 35.31 3.18
3721 3884 1.251251 GCTCCCATTGCACTTTCACT 58.749 50.000 0.00 0.00 0.00 3.41
3722 3885 2.224744 TGCTCCCATTGCACTTTCACTA 60.225 45.455 0.00 0.00 35.31 2.74
3733 3900 3.550639 GCACTTTCACTATGCAAGCAACA 60.551 43.478 0.00 0.00 39.23 3.33
3796 3963 6.192044 GGGAGGGATTTTCCTTTGTATGTAA 58.808 40.000 0.00 0.00 37.25 2.41
3896 4073 2.234908 AGCGAGTTCCATGCTCTTTACT 59.765 45.455 0.00 0.00 32.44 2.24
3960 4137 2.977914 GCACCTTGCAGATCTACTCAA 58.022 47.619 0.00 0.00 44.26 3.02
4179 4356 2.039818 ACTGATGATGCTTGCAGGAG 57.960 50.000 0.00 0.00 32.82 3.69
4263 4440 5.129485 TGAGATAGAGCTGAAACTAAAGGGG 59.871 44.000 0.00 0.00 0.00 4.79
4332 4509 5.313280 ACAATGGTGAAAGGTTAGGTACA 57.687 39.130 0.00 0.00 0.00 2.90
4467 4644 3.803082 CATGGTGGCCGAGTTGCG 61.803 66.667 0.00 0.00 40.47 4.85
4484 4661 1.583967 CGTGCTTCTCGCTACCTCG 60.584 63.158 0.00 0.00 40.11 4.63
4507 4684 3.174375 GAGCAATCCGAAGAAATTGTGC 58.826 45.455 0.00 0.00 34.49 4.57
4659 4836 4.082523 ACCGGCGGTCATGTCCTG 62.083 66.667 28.83 0.00 0.00 3.86
4678 4855 1.889170 TGTTCACACCACAAAAGTGCA 59.111 42.857 0.00 0.00 38.87 4.57
4722 4899 0.394488 TTGGTGAAACTGCGGTGGAA 60.394 50.000 0.00 0.00 36.74 3.53
4758 4935 3.532155 CTCCTCCCCTCGCCGAAG 61.532 72.222 0.00 0.00 0.00 3.79
4812 4989 6.558775 ACAGGATTTGTTAGGAGATGGCTATA 59.441 38.462 0.00 0.00 36.31 1.31
4905 5083 9.503427 GATGGTGTACTAATTATTTGTGAAAGC 57.497 33.333 2.51 0.00 0.00 3.51
4922 5100 8.504812 TGTGAAAGCTAAGATATTGTATGCAA 57.495 30.769 0.00 0.00 39.16 4.08
4930 5108 8.242053 GCTAAGATATTGTATGCAAGCATCAAT 58.758 33.333 23.16 23.16 38.10 2.57
4941 5119 5.407502 TGCAAGCATCAATTTCTTCATCAG 58.592 37.500 0.00 0.00 0.00 2.90
4955 5133 6.231258 TCTTCATCAGCTACACATTCATCT 57.769 37.500 0.00 0.00 0.00 2.90
4963 5141 5.410746 CAGCTACACATTCATCTTGTCTTGT 59.589 40.000 0.00 0.00 0.00 3.16
4986 5165 4.623167 TGTGAAAACAAACCAATTCGTGTG 59.377 37.500 0.00 0.00 0.00 3.82
4987 5166 4.623595 GTGAAAACAAACCAATTCGTGTGT 59.376 37.500 0.00 0.00 35.65 3.72
4988 5167 4.623167 TGAAAACAAACCAATTCGTGTGTG 59.377 37.500 0.00 0.00 34.34 3.82
4989 5168 3.859411 AACAAACCAATTCGTGTGTGT 57.141 38.095 0.00 0.00 34.34 3.72
4990 5169 3.143807 ACAAACCAATTCGTGTGTGTG 57.856 42.857 0.00 0.00 32.80 3.82
4991 5170 2.490115 ACAAACCAATTCGTGTGTGTGT 59.510 40.909 0.00 0.00 32.80 3.72
4992 5171 2.842208 AACCAATTCGTGTGTGTGTG 57.158 45.000 0.00 0.00 0.00 3.82
4993 5172 1.745232 ACCAATTCGTGTGTGTGTGT 58.255 45.000 0.00 0.00 0.00 3.72
4994 5173 1.400142 ACCAATTCGTGTGTGTGTGTG 59.600 47.619 0.00 0.00 0.00 3.82
4995 5174 1.400142 CCAATTCGTGTGTGTGTGTGT 59.600 47.619 0.00 0.00 0.00 3.72
4996 5175 2.439541 CAATTCGTGTGTGTGTGTGTG 58.560 47.619 0.00 0.00 0.00 3.82
4997 5176 1.732941 ATTCGTGTGTGTGTGTGTGT 58.267 45.000 0.00 0.00 0.00 3.72
4998 5177 0.793250 TTCGTGTGTGTGTGTGTGTG 59.207 50.000 0.00 0.00 0.00 3.82
4999 5178 0.319986 TCGTGTGTGTGTGTGTGTGT 60.320 50.000 0.00 0.00 0.00 3.72
5000 5179 0.179227 CGTGTGTGTGTGTGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
5001 5180 0.454285 GTGTGTGTGTGTGTGTGTGC 60.454 55.000 0.00 0.00 0.00 4.57
5002 5181 1.225991 GTGTGTGTGTGTGTGTGCG 60.226 57.895 0.00 0.00 0.00 5.34
5003 5182 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
5004 5183 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
5005 5184 3.860125 GTGTGTGTGTGTGCGCGT 61.860 61.111 8.43 0.00 0.00 6.01
5006 5185 3.858989 TGTGTGTGTGTGCGCGTG 61.859 61.111 8.43 0.00 0.00 5.34
5007 5186 3.860125 GTGTGTGTGTGCGCGTGT 61.860 61.111 8.43 0.00 0.00 4.49
5008 5187 3.858989 TGTGTGTGTGCGCGTGTG 61.859 61.111 8.43 0.00 0.00 3.82
5009 5188 3.860125 GTGTGTGTGCGCGTGTGT 61.860 61.111 8.43 0.00 0.00 3.72
5010 5189 3.858989 TGTGTGTGCGCGTGTGTG 61.859 61.111 8.43 0.00 0.00 3.82
5011 5190 3.860125 GTGTGTGCGCGTGTGTGT 61.860 61.111 8.43 0.00 0.00 3.72
5012 5191 2.202756 TGTGTGCGCGTGTGTGTA 60.203 55.556 8.43 0.00 0.00 2.90
5013 5192 1.592939 TGTGTGCGCGTGTGTGTAT 60.593 52.632 8.43 0.00 0.00 2.29
5014 5193 1.154814 TGTGTGCGCGTGTGTGTATT 61.155 50.000 8.43 0.00 0.00 1.89
5015 5194 0.041663 GTGTGCGCGTGTGTGTATTT 60.042 50.000 8.43 0.00 0.00 1.40
5016 5195 0.041751 TGTGCGCGTGTGTGTATTTG 60.042 50.000 8.43 0.00 0.00 2.32
5017 5196 0.724453 GTGCGCGTGTGTGTATTTGG 60.724 55.000 8.43 0.00 0.00 3.28
5018 5197 0.880718 TGCGCGTGTGTGTATTTGGA 60.881 50.000 8.43 0.00 0.00 3.53
5019 5198 0.446222 GCGCGTGTGTGTATTTGGAT 59.554 50.000 8.43 0.00 0.00 3.41
5020 5199 1.135803 GCGCGTGTGTGTATTTGGATT 60.136 47.619 8.43 0.00 0.00 3.01
5021 5200 2.769376 CGCGTGTGTGTATTTGGATTC 58.231 47.619 0.00 0.00 0.00 2.52
5022 5201 2.158645 CGCGTGTGTGTATTTGGATTCA 59.841 45.455 0.00 0.00 0.00 2.57
5023 5202 3.181511 CGCGTGTGTGTATTTGGATTCAT 60.182 43.478 0.00 0.00 0.00 2.57
5024 5203 4.671508 CGCGTGTGTGTATTTGGATTCATT 60.672 41.667 0.00 0.00 0.00 2.57
5025 5204 5.160641 GCGTGTGTGTATTTGGATTCATTT 58.839 37.500 0.00 0.00 0.00 2.32
5074 5253 5.876460 GCCTCATTTGTGCCATTTAAATTCT 59.124 36.000 0.00 0.00 0.00 2.40
5076 5255 7.094677 GCCTCATTTGTGCCATTTAAATTCTTT 60.095 33.333 0.00 0.00 0.00 2.52
5135 5314 2.523179 TGGAACACACGCATGTACG 58.477 52.632 0.00 0.00 36.72 3.67
5137 5316 1.000496 TGGAACACACGCATGTACGTA 60.000 47.619 0.00 0.00 46.34 3.57
5138 5317 1.387756 GGAACACACGCATGTACGTAC 59.612 52.381 18.90 18.90 46.34 3.67
5141 5320 0.989164 CACACGCATGTACGTACCTG 59.011 55.000 22.43 22.30 46.34 4.00
5142 5321 0.734942 ACACGCATGTACGTACCTGC 60.735 55.000 33.16 33.16 46.34 4.85
5143 5322 1.153706 ACGCATGTACGTACCTGCC 60.154 57.895 34.99 23.38 46.19 4.85
5144 5323 1.881252 CGCATGTACGTACCTGCCC 60.881 63.158 34.99 18.95 42.43 5.36
5146 5325 0.748450 GCATGTACGTACCTGCCCTA 59.252 55.000 33.04 12.36 40.48 3.53
5147 5326 1.343465 GCATGTACGTACCTGCCCTAT 59.657 52.381 33.04 13.91 40.48 2.57
5148 5327 2.224209 GCATGTACGTACCTGCCCTATT 60.224 50.000 33.04 4.63 40.48 1.73
5156 5338 0.846693 ACCTGCCCTATTGTCATCCC 59.153 55.000 0.00 0.00 0.00 3.85
5157 5339 0.846015 CCTGCCCTATTGTCATCCCA 59.154 55.000 0.00 0.00 0.00 4.37
5165 5347 5.515534 GCCCTATTGTCATCCCAACAGATAT 60.516 44.000 0.00 0.00 0.00 1.63
5229 5419 1.760613 TCTGACAAACACCGGAGAGTT 59.239 47.619 9.46 7.21 0.00 3.01
5241 5431 1.270625 CGGAGAGTTAGTTGGTTGCCA 60.271 52.381 0.00 0.00 0.00 4.92
5323 5513 1.200716 GATGTGGTGACGACGGACTAA 59.799 52.381 0.00 0.00 0.00 2.24
5404 5594 8.786826 TGACAATTCATAGAACGGAAAATAGT 57.213 30.769 0.00 0.00 0.00 2.12
5464 5666 1.080569 CCTTTGGATTGCACGTGGC 60.081 57.895 18.88 10.30 45.13 5.01
5503 5715 9.184523 TCCATAGGTTGGTTAATCAAATAAGTG 57.815 33.333 1.89 0.00 46.52 3.16
5521 5733 0.482446 TGGTCCAAGGGATGCAAACT 59.518 50.000 0.00 0.00 32.73 2.66
5546 5759 1.072965 CACAGGAGAAAAGCAGAGGGT 59.927 52.381 0.00 0.00 0.00 4.34
5564 5777 7.870445 GCAGAGGGTATCTTAGAAACAGATAAG 59.130 40.741 0.00 0.00 35.46 1.73
5647 5860 1.830477 GAGAGTCAATCTGGCTGACCT 59.170 52.381 0.00 0.00 43.53 3.85
5730 5943 1.751924 CTCTTGGGTTAGAGGACTCCG 59.248 57.143 0.00 0.00 38.38 4.63
5731 5944 0.175989 CTTGGGTTAGAGGACTCCGC 59.824 60.000 0.00 0.00 0.00 5.54
5732 5945 0.543410 TTGGGTTAGAGGACTCCGCA 60.543 55.000 1.25 0.00 0.00 5.69
5733 5946 0.543410 TGGGTTAGAGGACTCCGCAA 60.543 55.000 1.25 0.00 0.00 4.85
5734 5947 0.611714 GGGTTAGAGGACTCCGCAAA 59.388 55.000 1.25 0.00 0.00 3.68
5735 5948 1.002773 GGGTTAGAGGACTCCGCAAAA 59.997 52.381 1.25 0.00 0.00 2.44
5736 5949 2.347731 GGTTAGAGGACTCCGCAAAAG 58.652 52.381 1.25 0.00 0.00 2.27
5737 5950 2.289506 GGTTAGAGGACTCCGCAAAAGT 60.290 50.000 1.25 0.00 0.00 2.66
5738 5951 2.994578 GTTAGAGGACTCCGCAAAAGTC 59.005 50.000 1.25 2.35 41.98 3.01
5739 5952 0.038159 AGAGGACTCCGCAAAAGTCG 60.038 55.000 1.25 0.00 43.33 4.18
5740 5953 1.627550 GAGGACTCCGCAAAAGTCGC 61.628 60.000 0.00 0.00 43.33 5.19
5741 5954 1.959226 GGACTCCGCAAAAGTCGCA 60.959 57.895 4.58 0.00 43.33 5.10
5742 5955 1.503818 GGACTCCGCAAAAGTCGCAA 61.504 55.000 4.58 0.00 43.33 4.85
5743 5956 0.306533 GACTCCGCAAAAGTCGCAAA 59.693 50.000 0.00 0.00 34.33 3.68
5744 5957 0.951558 ACTCCGCAAAAGTCGCAAAT 59.048 45.000 0.00 0.00 0.00 2.32
5745 5958 1.069227 ACTCCGCAAAAGTCGCAAATC 60.069 47.619 0.00 0.00 0.00 2.17
5746 5959 0.239879 TCCGCAAAAGTCGCAAATCC 59.760 50.000 0.00 0.00 0.00 3.01
5747 5960 1.065031 CCGCAAAAGTCGCAAATCCG 61.065 55.000 0.00 0.00 0.00 4.18
5748 5961 1.664643 CGCAAAAGTCGCAAATCCGC 61.665 55.000 0.00 0.00 0.00 5.54
5749 5962 0.662970 GCAAAAGTCGCAAATCCGCA 60.663 50.000 0.00 0.00 0.00 5.69
5750 5963 1.764851 CAAAAGTCGCAAATCCGCAA 58.235 45.000 0.00 0.00 0.00 4.85
5751 5964 2.123342 CAAAAGTCGCAAATCCGCAAA 58.877 42.857 0.00 0.00 0.00 3.68
5752 5965 2.500509 AAAGTCGCAAATCCGCAAAA 57.499 40.000 0.00 0.00 0.00 2.44
5753 5966 2.723124 AAGTCGCAAATCCGCAAAAT 57.277 40.000 0.00 0.00 0.00 1.82
5754 5967 2.723124 AGTCGCAAATCCGCAAAATT 57.277 40.000 0.00 0.00 0.00 1.82
5755 5968 3.025287 AGTCGCAAATCCGCAAAATTT 57.975 38.095 0.00 0.00 0.00 1.82
5756 5969 2.986479 AGTCGCAAATCCGCAAAATTTC 59.014 40.909 0.00 0.00 0.00 2.17
5757 5970 1.982223 TCGCAAATCCGCAAAATTTCG 59.018 42.857 0.00 0.00 0.00 3.46
5758 5971 1.058979 CGCAAATCCGCAAAATTTCGG 59.941 47.619 11.15 11.15 46.52 4.30
5759 5972 1.201910 GCAAATCCGCAAAATTTCGGC 60.202 47.619 12.28 8.66 44.91 5.54
5768 5981 4.844511 GCAAAATTTCGGCGAATATACG 57.155 40.909 24.33 13.08 0.00 3.06
5769 5982 3.662186 GCAAAATTTCGGCGAATATACGG 59.338 43.478 24.33 12.44 0.00 4.02
5770 5983 4.215965 CAAAATTTCGGCGAATATACGGG 58.784 43.478 24.33 6.51 0.00 5.28
5771 5984 1.435577 ATTTCGGCGAATATACGGGC 58.564 50.000 24.33 0.00 0.00 6.13
5772 5985 0.390124 TTTCGGCGAATATACGGGCT 59.610 50.000 24.33 0.00 0.00 5.19
5773 5986 0.038892 TTCGGCGAATATACGGGCTC 60.039 55.000 19.83 0.00 0.00 4.70
5774 5987 1.800315 CGGCGAATATACGGGCTCG 60.800 63.158 3.27 3.27 43.02 5.03
5788 6001 0.811281 GGCTCGTCCCAATTTTCTGG 59.189 55.000 0.00 0.00 36.10 3.86
5789 6002 1.534729 GCTCGTCCCAATTTTCTGGT 58.465 50.000 0.00 0.00 34.33 4.00
5790 6003 1.468914 GCTCGTCCCAATTTTCTGGTC 59.531 52.381 0.00 0.00 34.33 4.02
5791 6004 2.778299 CTCGTCCCAATTTTCTGGTCA 58.222 47.619 0.00 0.00 34.33 4.02
5792 6005 2.744202 CTCGTCCCAATTTTCTGGTCAG 59.256 50.000 0.00 0.00 34.33 3.51
5793 6006 1.200020 CGTCCCAATTTTCTGGTCAGC 59.800 52.381 0.00 0.00 34.33 4.26
5794 6007 2.238521 GTCCCAATTTTCTGGTCAGCA 58.761 47.619 0.00 0.00 34.33 4.41
5795 6008 2.827921 GTCCCAATTTTCTGGTCAGCAT 59.172 45.455 0.00 0.00 34.33 3.79
5796 6009 4.016444 GTCCCAATTTTCTGGTCAGCATA 58.984 43.478 0.00 0.00 34.33 3.14
5797 6010 4.096984 GTCCCAATTTTCTGGTCAGCATAG 59.903 45.833 0.00 0.00 34.33 2.23
5798 6011 4.018506 TCCCAATTTTCTGGTCAGCATAGA 60.019 41.667 0.00 0.00 34.33 1.98
5799 6012 4.337555 CCCAATTTTCTGGTCAGCATAGAG 59.662 45.833 0.00 0.00 34.33 2.43
5800 6013 4.201990 CCAATTTTCTGGTCAGCATAGAGC 60.202 45.833 0.00 0.00 46.19 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 8.729805 AATTGCACATGGAAAGTTTAGAAAAA 57.270 26.923 0.00 0.00 0.00 1.94
18 19 8.729805 AAATTGCACATGGAAAGTTTAGAAAA 57.270 26.923 0.00 0.00 0.00 2.29
19 20 8.729805 AAAATTGCACATGGAAAGTTTAGAAA 57.270 26.923 0.00 0.00 0.00 2.52
20 21 8.729805 AAAAATTGCACATGGAAAGTTTAGAA 57.270 26.923 0.00 0.00 0.00 2.10
43 44 8.658840 AAAAGTCAGGCTACCCATAATAAAAA 57.341 30.769 0.00 0.00 0.00 1.94
44 45 8.658840 AAAAAGTCAGGCTACCCATAATAAAA 57.341 30.769 0.00 0.00 0.00 1.52
86 87 9.883142 AATAAGTTTCATGTTTTGGAAGACAAA 57.117 25.926 0.00 0.00 46.82 2.83
87 88 9.528018 GAATAAGTTTCATGTTTTGGAAGACAA 57.472 29.630 0.00 0.00 37.28 3.18
88 89 8.690884 TGAATAAGTTTCATGTTTTGGAAGACA 58.309 29.630 0.00 0.00 0.00 3.41
89 90 9.696917 ATGAATAAGTTTCATGTTTTGGAAGAC 57.303 29.630 0.27 0.00 37.71 3.01
90 91 9.695526 CATGAATAAGTTTCATGTTTTGGAAGA 57.304 29.630 16.46 0.00 46.42 2.87
136 137 9.941325 ATAAATTGCCACATGAGAATGTAAAAA 57.059 25.926 0.00 0.00 32.74 1.94
137 138 9.941325 AATAAATTGCCACATGAGAATGTAAAA 57.059 25.926 0.00 0.00 32.74 1.52
366 367 9.502091 AGTTTACAACTGTCATGCTCTATTTTA 57.498 29.630 0.00 0.00 41.01 1.52
367 368 8.396272 AGTTTACAACTGTCATGCTCTATTTT 57.604 30.769 0.00 0.00 41.01 1.82
368 369 7.986085 AGTTTACAACTGTCATGCTCTATTT 57.014 32.000 0.00 0.00 41.01 1.40
369 370 8.314751 AGTAGTTTACAACTGTCATGCTCTATT 58.685 33.333 0.00 0.00 42.84 1.73
370 371 7.841956 AGTAGTTTACAACTGTCATGCTCTAT 58.158 34.615 0.00 0.00 42.84 1.98
371 372 7.228314 AGTAGTTTACAACTGTCATGCTCTA 57.772 36.000 0.00 0.00 42.84 2.43
372 373 6.102897 AGTAGTTTACAACTGTCATGCTCT 57.897 37.500 0.00 0.00 42.84 4.09
373 374 5.348997 GGAGTAGTTTACAACTGTCATGCTC 59.651 44.000 0.00 0.00 42.84 4.26
374 375 5.238583 GGAGTAGTTTACAACTGTCATGCT 58.761 41.667 0.00 0.00 42.84 3.79
375 376 4.392138 GGGAGTAGTTTACAACTGTCATGC 59.608 45.833 0.00 0.00 42.84 4.06
376 377 5.794894 AGGGAGTAGTTTACAACTGTCATG 58.205 41.667 0.00 0.00 42.84 3.07
377 378 5.780793 AGAGGGAGTAGTTTACAACTGTCAT 59.219 40.000 0.00 0.00 42.84 3.06
378 379 5.145564 AGAGGGAGTAGTTTACAACTGTCA 58.854 41.667 0.00 0.00 42.84 3.58
379 380 5.725325 AGAGGGAGTAGTTTACAACTGTC 57.275 43.478 0.00 0.00 42.84 3.51
380 381 5.601313 TCAAGAGGGAGTAGTTTACAACTGT 59.399 40.000 0.00 0.00 42.84 3.55
381 382 6.097915 TCAAGAGGGAGTAGTTTACAACTG 57.902 41.667 0.00 0.00 42.84 3.16
382 383 6.742559 TTCAAGAGGGAGTAGTTTACAACT 57.257 37.500 0.00 0.00 45.40 3.16
383 384 7.215085 TCTTTCAAGAGGGAGTAGTTTACAAC 58.785 38.462 0.00 0.00 0.00 3.32
384 385 7.369551 TCTTTCAAGAGGGAGTAGTTTACAA 57.630 36.000 0.00 0.00 0.00 2.41
385 386 6.989155 TCTTTCAAGAGGGAGTAGTTTACA 57.011 37.500 0.00 0.00 0.00 2.41
386 387 8.850007 ATTTCTTTCAAGAGGGAGTAGTTTAC 57.150 34.615 0.00 0.00 36.22 2.01
393 394 7.990314 GCTCTTATATTTCTTTCAAGAGGGAGT 59.010 37.037 10.64 0.00 41.53 3.85
394 395 8.376889 GCTCTTATATTTCTTTCAAGAGGGAG 57.623 38.462 10.64 0.00 41.53 4.30
396 397 7.183580 CGCTCTTATATTTCTTTCAAGAGGG 57.816 40.000 10.88 10.88 44.50 4.30
397 398 7.778470 ACGCTCTTATATTTCTTTCAAGAGG 57.222 36.000 10.64 4.86 41.53 3.69
412 413 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
413 414 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
414 415 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
415 416 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
429 430 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
430 431 9.224058 GTTAGAGCGTTTAGATCACTAAAGTAG 57.776 37.037 0.00 0.00 45.42 2.57
431 432 8.954350 AGTTAGAGCGTTTAGATCACTAAAGTA 58.046 33.333 0.00 0.00 45.42 2.24
432 433 7.828712 AGTTAGAGCGTTTAGATCACTAAAGT 58.171 34.615 0.00 0.00 45.42 2.66
433 434 8.690680 AAGTTAGAGCGTTTAGATCACTAAAG 57.309 34.615 0.00 0.00 45.42 1.85
446 447 9.455847 CCGTAAACTAATATAAGTTAGAGCGTT 57.544 33.333 1.02 0.00 38.76 4.84
447 448 8.840321 TCCGTAAACTAATATAAGTTAGAGCGT 58.160 33.333 1.02 0.00 38.76 5.07
448 449 9.327529 CTCCGTAAACTAATATAAGTTAGAGCG 57.672 37.037 1.02 0.00 38.76 5.03
449 450 9.623350 CCTCCGTAAACTAATATAAGTTAGAGC 57.377 37.037 1.02 0.00 38.76 4.09
464 465 9.955102 AAGAAAAATATACTTCCTCCGTAAACT 57.045 29.630 0.00 0.00 0.00 2.66
465 466 9.983804 CAAGAAAAATATACTTCCTCCGTAAAC 57.016 33.333 0.00 0.00 0.00 2.01
466 467 9.729281 ACAAGAAAAATATACTTCCTCCGTAAA 57.271 29.630 0.00 0.00 0.00 2.01
468 469 9.807649 GTACAAGAAAAATATACTTCCTCCGTA 57.192 33.333 0.00 0.00 0.00 4.02
469 470 7.490402 CGTACAAGAAAAATATACTTCCTCCGT 59.510 37.037 0.00 0.00 0.00 4.69
470 471 7.703621 TCGTACAAGAAAAATATACTTCCTCCG 59.296 37.037 0.00 0.00 0.00 4.63
471 472 8.937634 TCGTACAAGAAAAATATACTTCCTCC 57.062 34.615 0.00 0.00 0.00 4.30
472 473 9.583765 ACTCGTACAAGAAAAATATACTTCCTC 57.416 33.333 0.00 0.00 0.00 3.71
473 474 9.939802 AACTCGTACAAGAAAAATATACTTCCT 57.060 29.630 0.00 0.00 0.00 3.36
531 532 3.699038 GCCCATATAGCAGTTTTTCCACA 59.301 43.478 0.00 0.00 0.00 4.17
532 533 3.068165 GGCCCATATAGCAGTTTTTCCAC 59.932 47.826 0.00 0.00 0.00 4.02
533 534 3.052944 AGGCCCATATAGCAGTTTTTCCA 60.053 43.478 0.00 0.00 0.00 3.53
534 535 3.566351 AGGCCCATATAGCAGTTTTTCC 58.434 45.455 0.00 0.00 0.00 3.13
570 571 1.202806 CGATCCTGGCCCATTGTGTAT 60.203 52.381 0.00 0.00 0.00 2.29
597 605 3.781307 CTTGGGGTCGATCCGCCA 61.781 66.667 9.04 8.23 46.91 5.69
628 660 1.204146 TCTTCGGCAGCTAGGGATTT 58.796 50.000 0.00 0.00 0.00 2.17
629 661 1.204146 TTCTTCGGCAGCTAGGGATT 58.796 50.000 0.00 0.00 0.00 3.01
630 662 1.204146 TTTCTTCGGCAGCTAGGGAT 58.796 50.000 0.00 0.00 0.00 3.85
635 667 2.076863 GCTCTTTTTCTTCGGCAGCTA 58.923 47.619 0.00 0.00 0.00 3.32
684 719 4.980805 TCACACAAGGGCGGCGAC 62.981 66.667 12.98 8.16 0.00 5.19
685 720 4.015406 ATCACACAAGGGCGGCGA 62.015 61.111 12.98 0.00 0.00 5.54
709 744 3.617531 CGGATCAGTTGCCAGTTCTTAGT 60.618 47.826 0.00 0.00 0.00 2.24
723 758 2.430610 GGCTCCAGCTCGGATCAGT 61.431 63.158 5.50 0.00 45.19 3.41
749 784 1.204786 ATCCCCATGACACCCACGAA 61.205 55.000 0.00 0.00 0.00 3.85
750 785 1.615124 ATCCCCATGACACCCACGA 60.615 57.895 0.00 0.00 0.00 4.35
753 788 2.374525 CCGATCCCCATGACACCCA 61.375 63.158 0.00 0.00 0.00 4.51
754 789 1.418908 ATCCGATCCCCATGACACCC 61.419 60.000 0.00 0.00 0.00 4.61
755 790 0.035458 GATCCGATCCCCATGACACC 59.965 60.000 0.00 0.00 0.00 4.16
756 791 0.758734 TGATCCGATCCCCATGACAC 59.241 55.000 5.91 0.00 0.00 3.67
757 792 1.051008 CTGATCCGATCCCCATGACA 58.949 55.000 5.91 0.00 0.00 3.58
764 811 1.373059 GCTTCCCTGATCCGATCCC 59.627 63.158 5.91 0.00 0.00 3.85
799 846 1.538950 GGAGCAACTTCAGCTTTCCTG 59.461 52.381 0.00 0.00 43.58 3.86
800 847 1.423161 AGGAGCAACTTCAGCTTTCCT 59.577 47.619 0.00 0.00 43.58 3.36
801 848 1.538950 CAGGAGCAACTTCAGCTTTCC 59.461 52.381 0.00 0.00 43.58 3.13
802 849 1.068679 GCAGGAGCAACTTCAGCTTTC 60.069 52.381 0.00 0.00 43.58 2.62
803 850 0.957362 GCAGGAGCAACTTCAGCTTT 59.043 50.000 0.00 0.00 43.58 3.51
857 904 1.804748 GTCGAAGTTGAACATCCCCAC 59.195 52.381 0.00 0.00 0.00 4.61
869 916 3.257624 ACGGTTGATTCCTAGTCGAAGTT 59.742 43.478 0.00 0.00 0.00 2.66
901 948 0.693049 ATCTTGTGGCCGTCTTTCCT 59.307 50.000 0.00 0.00 0.00 3.36
925 972 3.435186 GACTTTGCAGCGGAGGGC 61.435 66.667 0.00 0.00 44.05 5.19
936 983 1.151668 CTGGAGCAACCTCGACTTTG 58.848 55.000 1.91 0.00 39.06 2.77
956 1003 8.663911 CACACTTCTTTCTCTTGGATCTTTATC 58.336 37.037 0.00 0.00 0.00 1.75
957 1004 7.120432 GCACACTTCTTTCTCTTGGATCTTTAT 59.880 37.037 0.00 0.00 0.00 1.40
958 1005 6.428159 GCACACTTCTTTCTCTTGGATCTTTA 59.572 38.462 0.00 0.00 0.00 1.85
959 1006 5.240403 GCACACTTCTTTCTCTTGGATCTTT 59.760 40.000 0.00 0.00 0.00 2.52
960 1007 4.759183 GCACACTTCTTTCTCTTGGATCTT 59.241 41.667 0.00 0.00 0.00 2.40
961 1008 4.202398 TGCACACTTCTTTCTCTTGGATCT 60.202 41.667 0.00 0.00 0.00 2.75
962 1009 4.067896 TGCACACTTCTTTCTCTTGGATC 58.932 43.478 0.00 0.00 0.00 3.36
963 1010 3.817647 GTGCACACTTCTTTCTCTTGGAT 59.182 43.478 13.17 0.00 0.00 3.41
964 1011 3.206150 GTGCACACTTCTTTCTCTTGGA 58.794 45.455 13.17 0.00 0.00 3.53
965 1012 2.032549 CGTGCACACTTCTTTCTCTTGG 60.033 50.000 18.64 0.00 0.00 3.61
966 1013 2.609459 ACGTGCACACTTCTTTCTCTTG 59.391 45.455 18.64 0.00 0.00 3.02
967 1014 2.906354 ACGTGCACACTTCTTTCTCTT 58.094 42.857 18.64 0.00 0.00 2.85
968 1015 2.604046 ACGTGCACACTTCTTTCTCT 57.396 45.000 18.64 0.00 0.00 3.10
1008 1056 2.624437 ATCCGTCGCCGCTTCTTACC 62.624 60.000 0.00 0.00 0.00 2.85
1009 1057 1.207377 GATCCGTCGCCGCTTCTTAC 61.207 60.000 0.00 0.00 0.00 2.34
1023 1071 3.905705 GATCAGCTCGCCGGATCCG 62.906 68.421 27.65 27.65 39.44 4.18
1123 1219 0.040067 CTGGTTTTCAACGCCTCTGC 60.040 55.000 0.00 0.00 0.00 4.26
1184 1281 4.115199 GGATCCGCTGGCCTTGGT 62.115 66.667 3.32 0.00 0.00 3.67
1211 1308 0.744771 GATCCACGCCTGAAACTCCC 60.745 60.000 0.00 0.00 0.00 4.30
1221 1318 1.947013 CTGATGCATGATCCACGCC 59.053 57.895 2.46 0.00 0.00 5.68
1222 1319 1.281960 GCTGATGCATGATCCACGC 59.718 57.895 2.46 0.00 39.41 5.34
1239 1336 1.067669 TCTATGCTCGACTGTGGATGC 59.932 52.381 0.00 0.81 0.00 3.91
1240 1337 2.736978 GTCTATGCTCGACTGTGGATG 58.263 52.381 0.00 0.00 0.00 3.51
1241 1338 1.335182 CGTCTATGCTCGACTGTGGAT 59.665 52.381 0.00 0.00 0.00 3.41
1242 1339 0.733150 CGTCTATGCTCGACTGTGGA 59.267 55.000 0.00 0.00 0.00 4.02
1243 1340 0.867753 GCGTCTATGCTCGACTGTGG 60.868 60.000 0.00 0.00 0.00 4.17
1244 1341 1.196749 CGCGTCTATGCTCGACTGTG 61.197 60.000 0.00 0.00 0.00 3.66
1263 1360 1.880340 CTTCTCGGTCTGCATCGGC 60.880 63.158 0.00 0.00 41.68 5.54
1352 1449 4.909696 TTTTCTCGAAGTGCAAATTCCA 57.090 36.364 7.20 0.00 37.71 3.53
1365 1462 6.458342 GCTCCACTTTCTTTTCTTTTTCTCGA 60.458 38.462 0.00 0.00 0.00 4.04
1368 1465 6.406288 CCTGCTCCACTTTCTTTTCTTTTTCT 60.406 38.462 0.00 0.00 0.00 2.52
1370 1467 5.422012 TCCTGCTCCACTTTCTTTTCTTTTT 59.578 36.000 0.00 0.00 0.00 1.94
1382 1479 1.003003 GCTTCTCTTCCTGCTCCACTT 59.997 52.381 0.00 0.00 0.00 3.16
1383 1480 0.612744 GCTTCTCTTCCTGCTCCACT 59.387 55.000 0.00 0.00 0.00 4.00
1385 1482 0.901124 GAGCTTCTCTTCCTGCTCCA 59.099 55.000 0.00 0.00 44.16 3.86
1389 1486 1.462670 CAAACGAGCTTCTCTTCCTGC 59.537 52.381 0.00 0.00 0.00 4.85
1403 1500 1.996898 ACGAATCTAATGCGCAAACGA 59.003 42.857 17.11 11.48 43.93 3.85
1533 1630 1.371558 GTCAAGCTCCGGTTCCAGT 59.628 57.895 0.00 0.00 0.00 4.00
1553 1652 3.099905 ACCTCCATCGATCTCAGTTTGA 58.900 45.455 0.00 0.00 0.00 2.69
1554 1653 3.118992 TCACCTCCATCGATCTCAGTTTG 60.119 47.826 0.00 0.00 0.00 2.93
1579 1678 1.411501 GCTGATCTCCTCCTCCTCAGT 60.412 57.143 0.00 0.00 36.55 3.41
1624 1723 0.755686 ACCTTCAGCTCCATCGATCC 59.244 55.000 0.00 0.00 0.00 3.36
1657 1756 3.144657 TGCTTCTTCATCCTTGCTCAA 57.855 42.857 0.00 0.00 0.00 3.02
1683 1782 0.249868 TCCCGGCTGCTATTGATTCG 60.250 55.000 0.00 0.00 0.00 3.34
1720 1819 0.807667 CAGCAGCTACGGTAGGCTTG 60.808 60.000 16.43 8.63 36.59 4.01
1722 1821 2.427245 CCAGCAGCTACGGTAGGCT 61.427 63.158 16.43 13.81 39.60 4.58
1770 1869 6.157211 AGTTGTTTACTTACTCATGTCCTCG 58.843 40.000 0.00 0.00 31.29 4.63
1795 1894 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
1796 1895 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
1797 1896 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
1798 1897 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
1799 1898 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
1847 1946 8.606602 CCTCCGTAAACTAATATAAAAGCGTTT 58.393 33.333 2.53 2.53 0.00 3.60
1848 1947 7.981225 TCCTCCGTAAACTAATATAAAAGCGTT 59.019 33.333 0.00 0.00 0.00 4.84
1849 1948 7.491682 TCCTCCGTAAACTAATATAAAAGCGT 58.508 34.615 0.00 0.00 0.00 5.07
1850 1949 7.935338 TCCTCCGTAAACTAATATAAAAGCG 57.065 36.000 0.00 0.00 0.00 4.68
1851 1950 9.322773 ACTTCCTCCGTAAACTAATATAAAAGC 57.677 33.333 0.00 0.00 0.00 3.51
1858 1957 9.461312 TGTAAGTACTTCCTCCGTAAACTAATA 57.539 33.333 12.39 0.00 0.00 0.98
1859 1958 8.246871 GTGTAAGTACTTCCTCCGTAAACTAAT 58.753 37.037 12.39 0.00 0.00 1.73
1860 1959 7.230510 TGTGTAAGTACTTCCTCCGTAAACTAA 59.769 37.037 12.39 0.00 0.00 2.24
1861 1960 6.714810 TGTGTAAGTACTTCCTCCGTAAACTA 59.285 38.462 12.39 0.00 0.00 2.24
1862 1961 5.536161 TGTGTAAGTACTTCCTCCGTAAACT 59.464 40.000 12.39 0.00 0.00 2.66
1863 1962 5.631096 GTGTGTAAGTACTTCCTCCGTAAAC 59.369 44.000 12.39 1.87 0.00 2.01
1864 1963 5.301551 TGTGTGTAAGTACTTCCTCCGTAAA 59.698 40.000 12.39 0.00 0.00 2.01
1865 1964 4.826733 TGTGTGTAAGTACTTCCTCCGTAA 59.173 41.667 12.39 0.00 0.00 3.18
1866 1965 4.397420 TGTGTGTAAGTACTTCCTCCGTA 58.603 43.478 12.39 0.00 0.00 4.02
1867 1966 3.225104 TGTGTGTAAGTACTTCCTCCGT 58.775 45.455 12.39 0.00 0.00 4.69
1868 1967 3.928727 TGTGTGTAAGTACTTCCTCCG 57.071 47.619 12.39 0.00 0.00 4.63
1869 1968 3.933332 GCATGTGTGTAAGTACTTCCTCC 59.067 47.826 12.39 0.00 0.00 4.30
1870 1969 4.822026 AGCATGTGTGTAAGTACTTCCTC 58.178 43.478 12.39 2.09 0.00 3.71
1871 1970 4.891992 AGCATGTGTGTAAGTACTTCCT 57.108 40.909 12.39 0.00 0.00 3.36
1872 1971 5.941948 AAAGCATGTGTGTAAGTACTTCC 57.058 39.130 12.39 0.29 0.00 3.46
1873 1972 6.071463 CGAAAAGCATGTGTGTAAGTACTTC 58.929 40.000 12.39 4.83 0.00 3.01
1874 1973 5.049680 CCGAAAAGCATGTGTGTAAGTACTT 60.050 40.000 13.68 13.68 0.00 2.24
1875 1974 4.451096 CCGAAAAGCATGTGTGTAAGTACT 59.549 41.667 0.00 0.00 0.00 2.73
1876 1975 4.212636 ACCGAAAAGCATGTGTGTAAGTAC 59.787 41.667 0.00 0.00 0.00 2.73
1877 1976 4.382291 ACCGAAAAGCATGTGTGTAAGTA 58.618 39.130 0.00 0.00 0.00 2.24
1878 1977 3.211045 ACCGAAAAGCATGTGTGTAAGT 58.789 40.909 0.00 0.00 0.00 2.24
1879 1978 3.896648 ACCGAAAAGCATGTGTGTAAG 57.103 42.857 0.00 0.00 0.00 2.34
1880 1979 4.640789 AAACCGAAAAGCATGTGTGTAA 57.359 36.364 0.00 0.00 0.00 2.41
1881 1980 4.096532 TGAAAACCGAAAAGCATGTGTGTA 59.903 37.500 0.00 0.00 0.00 2.90
1897 1996 4.830826 AAAGACGATCAAGGTGAAAACC 57.169 40.909 0.00 0.00 0.00 3.27
1948 2047 2.995466 TGCATAGTGAAAAGTGCAGC 57.005 45.000 0.00 0.00 42.13 5.25
1985 2093 4.290942 AGGGTTCAGAGGTTATAGAGTGG 58.709 47.826 0.00 0.00 0.00 4.00
1986 2094 5.450688 CGAAGGGTTCAGAGGTTATAGAGTG 60.451 48.000 0.00 0.00 0.00 3.51
1987 2095 4.645588 CGAAGGGTTCAGAGGTTATAGAGT 59.354 45.833 0.00 0.00 0.00 3.24
1988 2096 4.645588 ACGAAGGGTTCAGAGGTTATAGAG 59.354 45.833 0.00 0.00 0.00 2.43
1989 2097 4.607239 ACGAAGGGTTCAGAGGTTATAGA 58.393 43.478 0.00 0.00 0.00 1.98
1990 2098 5.340439 AACGAAGGGTTCAGAGGTTATAG 57.660 43.478 0.00 0.00 31.79 1.31
2038 2146 9.143631 GCAATGCAAACATTCTCTAGTTATTTT 57.856 29.630 0.00 0.00 44.83 1.82
2039 2147 8.306038 TGCAATGCAAACATTCTCTAGTTATTT 58.694 29.630 5.01 0.00 44.83 1.40
2308 2420 6.344500 ACCTCAACAATAATTTGCACAACAA 58.656 32.000 0.00 0.00 36.22 2.83
2309 2421 5.911752 ACCTCAACAATAATTTGCACAACA 58.088 33.333 0.00 0.00 36.22 3.33
2342 2455 0.877071 AAACCTGTGCAGCTCAATCG 59.123 50.000 0.00 0.00 0.00 3.34
2387 2508 3.391296 ACACAGTGAAGGTCCAGTAATGT 59.609 43.478 7.81 0.00 0.00 2.71
2502 2624 3.547649 AAAGTTCGCAATAACGGGTTC 57.452 42.857 0.00 0.00 34.46 3.62
2548 2670 6.095432 TGGTTTCACAGGTAATTTTCCATG 57.905 37.500 0.00 0.00 0.00 3.66
2626 2762 6.258354 TGACTGAATTTAGTCCCCTACTGTA 58.742 40.000 23.28 3.18 45.07 2.74
2876 3021 6.766467 TGTAGTTTGTTTCCCTCTTCTTCTTC 59.234 38.462 0.00 0.00 0.00 2.87
2888 3034 4.022329 CCCTGGTTCATGTAGTTTGTTTCC 60.022 45.833 0.00 0.00 0.00 3.13
2901 3047 0.779997 AGGAAAGCACCCTGGTTCAT 59.220 50.000 0.00 0.00 37.04 2.57
2942 3088 7.120873 CAGCTGAATGATCTATATCTTTTGGGG 59.879 40.741 8.42 0.00 31.53 4.96
2956 3102 2.425143 TGGGGTTCAGCTGAATGATC 57.575 50.000 30.65 17.91 36.33 2.92
3012 3158 3.319137 TTATCCGCTCTGATGTATGCC 57.681 47.619 0.00 0.00 0.00 4.40
3099 3245 8.441312 AATGAAGCAATCAACTCAATGTTTTT 57.559 26.923 0.00 0.00 42.54 1.94
3100 3246 8.339714 CAAATGAAGCAATCAACTCAATGTTTT 58.660 29.630 0.00 0.00 42.54 2.43
3131 3277 5.369685 GAGCCTTCTCTTTTTCCTTCAAG 57.630 43.478 0.00 0.00 36.42 3.02
3227 3379 5.403897 AAGTATCGCAATGTAACGGAATG 57.596 39.130 0.00 0.00 0.00 2.67
3331 3488 6.712241 ATTCATGAACAACAAGTAGACTCG 57.288 37.500 11.07 0.00 0.00 4.18
3352 3509 7.745620 AACAGGCGCTTTAAGCTATATAATT 57.254 32.000 15.29 0.00 39.60 1.40
3369 3526 6.292381 GCTATAGTTAGACAATGAAACAGGCG 60.292 42.308 0.84 0.00 0.00 5.52
3551 3714 3.071023 TCTTCCCGGCATTTGTCCTATAG 59.929 47.826 0.00 0.00 0.00 1.31
3590 3753 8.012241 GCTTTTAGTGAGTCTACAAATTCTGTG 58.988 37.037 0.00 0.00 39.20 3.66
3720 3883 5.762825 ATGGAACTATGTTGCTTGCATAG 57.237 39.130 15.87 15.87 46.67 2.23
3721 3884 5.651576 TGAATGGAACTATGTTGCTTGCATA 59.348 36.000 0.00 0.00 0.00 3.14
3722 3885 4.463539 TGAATGGAACTATGTTGCTTGCAT 59.536 37.500 0.00 0.00 0.00 3.96
3758 3925 8.597313 AAAATCCCTCCCCTAATTATAGAACT 57.403 34.615 0.00 0.00 0.00 3.01
3808 3975 1.270414 ACTGAGCATGAGGTCCCCTG 61.270 60.000 0.00 0.00 41.53 4.45
3896 4073 4.624364 CGGCCTGGTGTGCAGTGA 62.624 66.667 0.00 0.00 0.00 3.41
3960 4137 4.142469 GCCGTGTATTTCTGCAACCTTAAT 60.142 41.667 0.00 0.00 0.00 1.40
4179 4356 2.747989 GCCAGTTAAGTGTAGAAAGGGC 59.252 50.000 9.42 0.00 0.00 5.19
4263 4440 1.671379 GTCCTCGGACTTGGTTGCC 60.671 63.158 8.82 0.00 41.57 4.52
4384 4561 1.028868 GTGGCCTGAATGGACTGCTC 61.029 60.000 3.32 0.00 46.68 4.26
4484 4661 2.159517 ACAATTTCTTCGGATTGCTCGC 60.160 45.455 0.00 0.00 36.87 5.03
4507 4684 1.067516 CCCACCTTTTGTGTCAAGCAG 59.932 52.381 0.00 0.00 43.85 4.24
4527 4704 3.073678 GTGTTTCCCCATTGGCATTTTC 58.926 45.455 0.00 0.00 0.00 2.29
4555 4732 2.951642 CAACCTTTCTGGACAGCTCAAA 59.048 45.455 0.00 0.00 39.71 2.69
4644 4821 2.047274 AACAGGACATGACCGCCG 60.047 61.111 8.60 4.44 34.73 6.46
4678 4855 3.056107 TGACAGATACCTTTAGTTGCGCT 60.056 43.478 9.73 0.00 0.00 5.92
4722 4899 1.226030 GCGACCAAGCAACGGTAACT 61.226 55.000 0.00 0.00 36.69 2.24
4758 4935 3.545703 CAATGGACATGGTAAGGTCTCC 58.454 50.000 0.00 0.00 37.28 3.71
4770 4947 3.272574 CTGTCTACAGGCAATGGACAT 57.727 47.619 7.48 0.00 40.20 3.06
4812 4989 8.714179 CAAAGTGCACACATAATCATTCAAAAT 58.286 29.630 21.04 0.00 0.00 1.82
4852 5029 4.680440 GCACCAACTTTCCACACAAAAGAT 60.680 41.667 2.84 0.00 37.22 2.40
4922 5100 5.884232 TGTAGCTGATGAAGAAATTGATGCT 59.116 36.000 0.00 0.00 0.00 3.79
4930 5108 7.108194 AGATGAATGTGTAGCTGATGAAGAAA 58.892 34.615 0.00 0.00 0.00 2.52
4931 5109 6.647229 AGATGAATGTGTAGCTGATGAAGAA 58.353 36.000 0.00 0.00 0.00 2.52
4941 5119 5.180117 ACACAAGACAAGATGAATGTGTAGC 59.820 40.000 7.51 0.00 46.68 3.58
4955 5133 5.201713 TGGTTTGTTTTCACACAAGACAA 57.798 34.783 0.00 0.00 37.93 3.18
4963 5141 4.623167 CACACGAATTGGTTTGTTTTCACA 59.377 37.500 0.00 0.00 29.24 3.58
4986 5165 2.277247 GCGCACACACACACACAC 60.277 61.111 0.30 0.00 0.00 3.82
4987 5166 3.858989 CGCGCACACACACACACA 61.859 61.111 8.75 0.00 0.00 3.72
4988 5167 3.860125 ACGCGCACACACACACAC 61.860 61.111 5.73 0.00 0.00 3.82
4989 5168 3.858989 CACGCGCACACACACACA 61.859 61.111 5.73 0.00 0.00 3.72
4990 5169 3.860125 ACACGCGCACACACACAC 61.860 61.111 5.73 0.00 0.00 3.82
4991 5170 3.858989 CACACGCGCACACACACA 61.859 61.111 5.73 0.00 0.00 3.72
4992 5171 3.860125 ACACACGCGCACACACAC 61.860 61.111 5.73 0.00 0.00 3.82
4993 5172 3.858989 CACACACGCGCACACACA 61.859 61.111 5.73 0.00 0.00 3.72
4994 5173 1.827315 ATACACACACGCGCACACAC 61.827 55.000 5.73 0.00 0.00 3.82
4995 5174 1.154814 AATACACACACGCGCACACA 61.155 50.000 5.73 0.00 0.00 3.72
4996 5175 0.041663 AAATACACACACGCGCACAC 60.042 50.000 5.73 0.00 0.00 3.82
4997 5176 0.041751 CAAATACACACACGCGCACA 60.042 50.000 5.73 0.00 0.00 4.57
4998 5177 0.724453 CCAAATACACACACGCGCAC 60.724 55.000 5.73 0.00 0.00 5.34
4999 5178 0.880718 TCCAAATACACACACGCGCA 60.881 50.000 5.73 0.00 0.00 6.09
5000 5179 0.446222 ATCCAAATACACACACGCGC 59.554 50.000 5.73 0.00 0.00 6.86
5001 5180 2.158645 TGAATCCAAATACACACACGCG 59.841 45.455 3.53 3.53 0.00 6.01
5002 5181 3.822594 TGAATCCAAATACACACACGC 57.177 42.857 0.00 0.00 0.00 5.34
5003 5182 5.572511 CCAAATGAATCCAAATACACACACG 59.427 40.000 0.00 0.00 0.00 4.49
5004 5183 5.348451 GCCAAATGAATCCAAATACACACAC 59.652 40.000 0.00 0.00 0.00 3.82
5005 5184 5.245751 AGCCAAATGAATCCAAATACACACA 59.754 36.000 0.00 0.00 0.00 3.72
5006 5185 5.723295 AGCCAAATGAATCCAAATACACAC 58.277 37.500 0.00 0.00 0.00 3.82
5007 5186 5.999205 AGCCAAATGAATCCAAATACACA 57.001 34.783 0.00 0.00 0.00 3.72
5008 5187 7.715657 TCATAGCCAAATGAATCCAAATACAC 58.284 34.615 0.00 0.00 32.97 2.90
5009 5188 7.560991 ACTCATAGCCAAATGAATCCAAATACA 59.439 33.333 0.00 0.00 35.51 2.29
5010 5189 7.945134 ACTCATAGCCAAATGAATCCAAATAC 58.055 34.615 0.00 0.00 35.51 1.89
5011 5190 8.537728 AACTCATAGCCAAATGAATCCAAATA 57.462 30.769 0.00 0.00 35.51 1.40
5012 5191 7.124599 TGAACTCATAGCCAAATGAATCCAAAT 59.875 33.333 0.00 0.00 35.51 2.32
5013 5192 6.436847 TGAACTCATAGCCAAATGAATCCAAA 59.563 34.615 0.00 0.00 35.51 3.28
5014 5193 5.951148 TGAACTCATAGCCAAATGAATCCAA 59.049 36.000 0.00 0.00 35.51 3.53
5015 5194 5.508567 TGAACTCATAGCCAAATGAATCCA 58.491 37.500 0.00 0.00 35.51 3.41
5016 5195 6.645790 ATGAACTCATAGCCAAATGAATCC 57.354 37.500 0.00 0.00 35.51 3.01
5017 5196 7.437267 CCAAATGAACTCATAGCCAAATGAATC 59.563 37.037 0.00 0.00 35.51 2.52
5018 5197 7.270047 CCAAATGAACTCATAGCCAAATGAAT 58.730 34.615 0.00 0.00 35.51 2.57
5019 5198 6.632909 CCAAATGAACTCATAGCCAAATGAA 58.367 36.000 0.00 0.00 35.51 2.57
5020 5199 5.394443 GCCAAATGAACTCATAGCCAAATGA 60.394 40.000 0.00 0.00 35.10 2.57
5021 5200 4.807304 GCCAAATGAACTCATAGCCAAATG 59.193 41.667 0.00 0.00 35.10 2.32
5022 5201 4.713321 AGCCAAATGAACTCATAGCCAAAT 59.287 37.500 0.00 0.00 35.10 2.32
5023 5202 4.088634 AGCCAAATGAACTCATAGCCAAA 58.911 39.130 0.00 0.00 35.10 3.28
5024 5203 3.700538 AGCCAAATGAACTCATAGCCAA 58.299 40.909 0.00 0.00 35.10 4.52
5025 5204 3.370840 AGCCAAATGAACTCATAGCCA 57.629 42.857 0.00 0.00 35.10 4.75
5087 5266 5.882557 ACAGGCTTGGATCAGTTTTGTATAG 59.117 40.000 0.00 0.00 0.00 1.31
5090 5269 3.820467 CACAGGCTTGGATCAGTTTTGTA 59.180 43.478 0.00 0.00 0.00 2.41
5092 5271 2.029649 CCACAGGCTTGGATCAGTTTTG 60.030 50.000 0.00 0.00 39.24 2.44
5096 5275 2.777536 TCCACAGGCTTGGATCAGT 58.222 52.632 12.50 0.00 41.00 3.41
5128 5307 3.181469 ACAATAGGGCAGGTACGTACATG 60.181 47.826 30.44 30.44 40.62 3.21
5129 5308 3.036091 ACAATAGGGCAGGTACGTACAT 58.964 45.455 26.02 17.76 0.00 2.29
5130 5309 2.428171 GACAATAGGGCAGGTACGTACA 59.572 50.000 26.02 5.11 0.00 2.90
5131 5310 2.428171 TGACAATAGGGCAGGTACGTAC 59.572 50.000 17.56 17.56 0.00 3.67
5132 5311 2.737544 TGACAATAGGGCAGGTACGTA 58.262 47.619 0.00 0.00 0.00 3.57
5133 5312 1.563924 TGACAATAGGGCAGGTACGT 58.436 50.000 0.00 0.00 0.00 3.57
5134 5313 2.548067 GGATGACAATAGGGCAGGTACG 60.548 54.545 0.00 0.00 0.00 3.67
5135 5314 2.224548 GGGATGACAATAGGGCAGGTAC 60.225 54.545 0.00 0.00 0.00 3.34
5136 5315 2.054799 GGGATGACAATAGGGCAGGTA 58.945 52.381 0.00 0.00 0.00 3.08
5137 5316 0.846693 GGGATGACAATAGGGCAGGT 59.153 55.000 0.00 0.00 0.00 4.00
5138 5317 0.846015 TGGGATGACAATAGGGCAGG 59.154 55.000 0.00 0.00 0.00 4.85
5141 5320 2.092429 TCTGTTGGGATGACAATAGGGC 60.092 50.000 0.00 0.00 39.26 5.19
5142 5321 3.931907 TCTGTTGGGATGACAATAGGG 57.068 47.619 0.00 0.00 39.26 3.53
5143 5322 6.772605 TCATATCTGTTGGGATGACAATAGG 58.227 40.000 0.00 0.00 39.26 2.57
5144 5323 7.601886 GTCTCATATCTGTTGGGATGACAATAG 59.398 40.741 0.00 0.00 39.88 1.73
5146 5325 6.294473 GTCTCATATCTGTTGGGATGACAAT 58.706 40.000 0.00 0.00 32.24 2.71
5147 5326 5.396772 GGTCTCATATCTGTTGGGATGACAA 60.397 44.000 0.00 0.00 0.00 3.18
5148 5327 4.101585 GGTCTCATATCTGTTGGGATGACA 59.898 45.833 0.00 0.00 0.00 3.58
5156 5338 4.564372 CGTTCAGTGGTCTCATATCTGTTG 59.436 45.833 0.00 0.00 0.00 3.33
5157 5339 4.462834 TCGTTCAGTGGTCTCATATCTGTT 59.537 41.667 0.00 0.00 0.00 3.16
5165 5347 3.390135 GAATGTTCGTTCAGTGGTCTCA 58.610 45.455 0.00 0.00 0.00 3.27
5202 5384 0.242017 GGTGTTTGTCAGAGCATGCC 59.758 55.000 15.66 6.03 0.00 4.40
5248 5438 1.270550 CTTCCGGAATGCAAGCTGTTT 59.729 47.619 19.21 0.00 0.00 2.83
5254 5444 0.677731 TGCTCCTTCCGGAATGCAAG 60.678 55.000 26.53 18.43 37.50 4.01
5263 5453 1.533625 TGTGGATTTTGCTCCTTCCG 58.466 50.000 0.00 0.00 36.20 4.30
5304 5494 1.250328 TTAGTCCGTCGTCACCACAT 58.750 50.000 0.00 0.00 0.00 3.21
5305 5495 1.250328 ATTAGTCCGTCGTCACCACA 58.750 50.000 0.00 0.00 0.00 4.17
5306 5496 2.358939 AATTAGTCCGTCGTCACCAC 57.641 50.000 0.00 0.00 0.00 4.16
5307 5497 2.036217 ACAAATTAGTCCGTCGTCACCA 59.964 45.455 0.00 0.00 0.00 4.17
5308 5498 2.665052 GACAAATTAGTCCGTCGTCACC 59.335 50.000 0.00 0.00 32.36 4.02
5309 5499 3.967080 GACAAATTAGTCCGTCGTCAC 57.033 47.619 0.00 0.00 32.36 3.67
5359 5549 6.234177 TGTCAAAAGATCCTCTCCTTTCTTC 58.766 40.000 0.00 0.00 32.01 2.87
5372 5562 7.974675 TCCGTTCTATGAATTGTCAAAAGATC 58.025 34.615 0.00 0.00 37.30 2.75
5373 5563 7.921786 TCCGTTCTATGAATTGTCAAAAGAT 57.078 32.000 0.00 0.00 37.30 2.40
5374 5564 7.737972 TTCCGTTCTATGAATTGTCAAAAGA 57.262 32.000 0.00 0.00 37.30 2.52
5404 5594 9.199982 CTAGAGTTAACATAAACGTCCAGAAAA 57.800 33.333 8.61 0.00 34.46 2.29
5410 5600 7.699812 ACGAATCTAGAGTTAACATAAACGTCC 59.300 37.037 8.61 0.00 34.46 4.79
5450 5640 1.002257 ATCAGCCACGTGCAATCCA 60.002 52.632 10.91 0.00 44.83 3.41
5503 5715 2.507407 TAGTTTGCATCCCTTGGACC 57.493 50.000 0.00 0.00 32.98 4.46
5521 5733 5.338381 CCCTCTGCTTTTCTCCTGTGTATTA 60.338 44.000 0.00 0.00 0.00 0.98
5546 5759 6.043243 CCAGGGGCTTATCTGTTTCTAAGATA 59.957 42.308 0.00 0.00 35.92 1.98
5564 5777 2.092375 ACTAGCAATTTAGTCCAGGGGC 60.092 50.000 0.00 0.00 0.00 5.80
5710 5923 1.751924 CGGAGTCCTCTAACCCAAGAG 59.248 57.143 7.77 0.00 42.30 2.85
5721 5934 1.627550 GCGACTTTTGCGGAGTCCTC 61.628 60.000 7.77 0.00 40.27 3.71
5722 5935 1.668151 GCGACTTTTGCGGAGTCCT 60.668 57.895 7.77 0.00 40.27 3.85
5723 5936 1.503818 TTGCGACTTTTGCGGAGTCC 61.504 55.000 0.00 0.00 40.27 3.85
5724 5937 0.306533 TTTGCGACTTTTGCGGAGTC 59.693 50.000 4.39 4.39 40.05 3.36
5725 5938 0.951558 ATTTGCGACTTTTGCGGAGT 59.048 45.000 0.00 0.00 34.24 3.85
5726 5939 1.606606 GATTTGCGACTTTTGCGGAG 58.393 50.000 0.00 0.00 34.24 4.63
5727 5940 0.239879 GGATTTGCGACTTTTGCGGA 59.760 50.000 0.00 0.00 34.24 5.54
5728 5941 1.065031 CGGATTTGCGACTTTTGCGG 61.065 55.000 0.00 0.00 34.24 5.69
5729 5942 1.664643 GCGGATTTGCGACTTTTGCG 61.665 55.000 0.00 0.00 34.24 4.85
5730 5943 0.662970 TGCGGATTTGCGACTTTTGC 60.663 50.000 0.00 0.00 37.81 3.68
5731 5944 1.764851 TTGCGGATTTGCGACTTTTG 58.235 45.000 0.00 0.00 37.81 2.44
5732 5945 2.500509 TTTGCGGATTTGCGACTTTT 57.499 40.000 0.00 0.00 37.81 2.27
5733 5946 2.500509 TTTTGCGGATTTGCGACTTT 57.499 40.000 0.00 0.00 37.81 2.66
5734 5947 2.723124 ATTTTGCGGATTTGCGACTT 57.277 40.000 0.00 0.00 37.81 3.01
5735 5948 2.723124 AATTTTGCGGATTTGCGACT 57.277 40.000 0.00 0.00 37.81 4.18
5736 5949 2.222267 CGAAATTTTGCGGATTTGCGAC 60.222 45.455 0.00 0.00 37.81 5.19
5737 5950 1.982223 CGAAATTTTGCGGATTTGCGA 59.018 42.857 0.00 0.00 37.81 5.10
5738 5951 2.402061 CGAAATTTTGCGGATTTGCG 57.598 45.000 0.00 0.00 37.81 4.85
5747 5960 3.662186 CCGTATATTCGCCGAAATTTTGC 59.338 43.478 2.60 2.04 0.00 3.68
5748 5961 4.215965 CCCGTATATTCGCCGAAATTTTG 58.784 43.478 2.60 0.00 0.00 2.44
5749 5962 3.304190 GCCCGTATATTCGCCGAAATTTT 60.304 43.478 2.60 0.00 0.00 1.82
5750 5963 2.224784 GCCCGTATATTCGCCGAAATTT 59.775 45.455 2.60 0.00 0.00 1.82
5751 5964 1.802365 GCCCGTATATTCGCCGAAATT 59.198 47.619 2.60 0.00 0.00 1.82
5752 5965 1.001633 AGCCCGTATATTCGCCGAAAT 59.998 47.619 2.60 1.84 0.00 2.17
5753 5966 0.390124 AGCCCGTATATTCGCCGAAA 59.610 50.000 2.60 0.00 0.00 3.46
5754 5967 0.038892 GAGCCCGTATATTCGCCGAA 60.039 55.000 0.33 0.33 0.00 4.30
5755 5968 1.582968 GAGCCCGTATATTCGCCGA 59.417 57.895 0.00 0.00 0.00 5.54
5756 5969 1.800315 CGAGCCCGTATATTCGCCG 60.800 63.158 0.00 0.00 0.00 6.46
5757 5970 4.164252 CGAGCCCGTATATTCGCC 57.836 61.111 0.00 0.00 0.00 5.54
5769 5982 0.811281 CCAGAAAATTGGGACGAGCC 59.189 55.000 0.00 0.00 34.46 4.70
5770 5983 1.468914 GACCAGAAAATTGGGACGAGC 59.531 52.381 0.00 0.00 42.76 5.03
5771 5984 2.744202 CTGACCAGAAAATTGGGACGAG 59.256 50.000 0.00 0.00 42.76 4.18
5772 5985 2.778299 CTGACCAGAAAATTGGGACGA 58.222 47.619 0.00 0.00 42.76 4.20
5773 5986 1.200020 GCTGACCAGAAAATTGGGACG 59.800 52.381 0.47 0.00 42.76 4.79
5774 5987 2.238521 TGCTGACCAGAAAATTGGGAC 58.761 47.619 0.47 0.00 42.76 4.46
5775 5988 2.673775 TGCTGACCAGAAAATTGGGA 57.326 45.000 0.47 0.00 42.76 4.37
5776 5989 4.272489 TCTATGCTGACCAGAAAATTGGG 58.728 43.478 0.47 0.00 42.76 4.12
5777 5990 4.201990 GCTCTATGCTGACCAGAAAATTGG 60.202 45.833 0.47 0.00 40.38 3.16
5778 5991 4.918037 GCTCTATGCTGACCAGAAAATTG 58.082 43.478 0.47 0.00 38.95 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.