Multiple sequence alignment - TraesCS2A01G497900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G497900 chr2A 100.000 2969 0 0 1 2969 728419689 728416721 0.000000e+00 5483.0
1 TraesCS2A01G497900 chr2A 96.875 32 0 1 1185 1216 641597158 641597128 5.000000e-03 52.8
2 TraesCS2A01G497900 chr2D 90.393 1707 105 26 356 2019 593524773 593523083 0.000000e+00 2189.0
3 TraesCS2A01G497900 chr2D 88.357 627 51 8 2056 2670 26778210 26777594 0.000000e+00 734.0
4 TraesCS2A01G497900 chr2D 90.385 52 4 1 2740 2790 593520896 593520845 1.910000e-07 67.6
5 TraesCS2A01G497900 chr2B 91.240 1347 89 13 685 2019 719984419 719983090 0.000000e+00 1807.0
6 TraesCS2A01G497900 chr2B 76.796 181 32 9 1245 1420 140852385 140852560 3.150000e-15 93.5
7 TraesCS2A01G497900 chr6A 95.872 654 24 2 2017 2670 563479350 563478700 0.000000e+00 1055.0
8 TraesCS2A01G497900 chr7A 93.435 655 36 3 2017 2670 48193837 48193189 0.000000e+00 965.0
9 TraesCS2A01G497900 chr7A 93.425 654 37 2 2017 2670 48208922 48208275 0.000000e+00 965.0
10 TraesCS2A01G497900 chr5D 93.450 626 37 2 2046 2671 548469936 548470557 0.000000e+00 926.0
11 TraesCS2A01G497900 chr5D 81.809 995 138 23 1005 1964 495308565 495309551 0.000000e+00 795.0
12 TraesCS2A01G497900 chr5D 76.757 185 39 4 1237 1419 355796323 355796141 1.880000e-17 100.0
13 TraesCS2A01G497900 chr3A 90.840 655 40 8 2017 2670 11424295 11423660 0.000000e+00 859.0
14 TraesCS2A01G497900 chr5B 81.800 1000 135 24 1005 1964 611952887 611953879 0.000000e+00 795.0
15 TraesCS2A01G497900 chr5B 93.200 500 28 2 1245 1741 251917775 251918271 0.000000e+00 730.0
16 TraesCS2A01G497900 chr5B 95.522 402 14 3 2032 2433 600520759 600520362 8.970000e-180 640.0
17 TraesCS2A01G497900 chr5A 81.143 997 139 22 1005 1963 619454333 619455318 0.000000e+00 754.0
18 TraesCS2A01G497900 chr5A 86.529 631 61 11 2056 2675 648966087 648966704 0.000000e+00 673.0
19 TraesCS2A01G497900 chr5A 79.897 970 142 21 1023 1970 631859146 631858208 0.000000e+00 662.0
20 TraesCS2A01G497900 chr6D 87.709 659 53 12 2024 2670 13176764 13177406 0.000000e+00 743.0
21 TraesCS2A01G497900 chr4A 93.252 489 24 7 2025 2511 108358687 108359168 0.000000e+00 712.0
22 TraesCS2A01G497900 chr1B 86.343 659 72 10 2024 2671 152516223 152516874 0.000000e+00 702.0
23 TraesCS2A01G497900 chr6B 92.786 402 23 4 2032 2433 269646380 269645985 7.140000e-161 577.0
24 TraesCS2A01G497900 chr6B 94.010 384 16 4 2050 2433 703991048 703990672 2.570000e-160 575.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G497900 chr2A 728416721 728419689 2968 True 5483.0 5483 100.000 1 2969 1 chr2A.!!$R2 2968
1 TraesCS2A01G497900 chr2D 593520845 593524773 3928 True 1128.3 2189 90.389 356 2790 2 chr2D.!!$R2 2434
2 TraesCS2A01G497900 chr2D 26777594 26778210 616 True 734.0 734 88.357 2056 2670 1 chr2D.!!$R1 614
3 TraesCS2A01G497900 chr2B 719983090 719984419 1329 True 1807.0 1807 91.240 685 2019 1 chr2B.!!$R1 1334
4 TraesCS2A01G497900 chr6A 563478700 563479350 650 True 1055.0 1055 95.872 2017 2670 1 chr6A.!!$R1 653
5 TraesCS2A01G497900 chr7A 48193189 48193837 648 True 965.0 965 93.435 2017 2670 1 chr7A.!!$R1 653
6 TraesCS2A01G497900 chr7A 48208275 48208922 647 True 965.0 965 93.425 2017 2670 1 chr7A.!!$R2 653
7 TraesCS2A01G497900 chr5D 548469936 548470557 621 False 926.0 926 93.450 2046 2671 1 chr5D.!!$F2 625
8 TraesCS2A01G497900 chr5D 495308565 495309551 986 False 795.0 795 81.809 1005 1964 1 chr5D.!!$F1 959
9 TraesCS2A01G497900 chr3A 11423660 11424295 635 True 859.0 859 90.840 2017 2670 1 chr3A.!!$R1 653
10 TraesCS2A01G497900 chr5B 611952887 611953879 992 False 795.0 795 81.800 1005 1964 1 chr5B.!!$F2 959
11 TraesCS2A01G497900 chr5A 619454333 619455318 985 False 754.0 754 81.143 1005 1963 1 chr5A.!!$F1 958
12 TraesCS2A01G497900 chr5A 648966087 648966704 617 False 673.0 673 86.529 2056 2675 1 chr5A.!!$F2 619
13 TraesCS2A01G497900 chr5A 631858208 631859146 938 True 662.0 662 79.897 1023 1970 1 chr5A.!!$R1 947
14 TraesCS2A01G497900 chr6D 13176764 13177406 642 False 743.0 743 87.709 2024 2670 1 chr6D.!!$F1 646
15 TraesCS2A01G497900 chr1B 152516223 152516874 651 False 702.0 702 86.343 2024 2671 1 chr1B.!!$F1 647

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
902 935 0.033504 TGCCTTCTCGGTGAGTTGAC 59.966 55.0 0.0 0.0 34.25 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2858 4806 0.031857 CCAGCACTCATAGCGAGGAG 59.968 60.0 6.96 6.96 46.98 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.632807 TTCTTTCCATATTTACGTTCAATTTGG 57.367 29.630 16.89 16.89 35.27 3.28
30 31 8.247562 TCTTTCCATATTTACGTTCAATTTGGG 58.752 33.333 20.10 11.04 34.91 4.12
31 32 7.469537 TTCCATATTTACGTTCAATTTGGGT 57.530 32.000 20.10 0.00 34.91 4.51
32 33 7.090953 TCCATATTTACGTTCAATTTGGGTC 57.909 36.000 20.10 0.00 34.91 4.46
33 34 6.095720 TCCATATTTACGTTCAATTTGGGTCC 59.904 38.462 20.10 0.00 34.91 4.46
34 35 3.900388 TTTACGTTCAATTTGGGTCCG 57.100 42.857 0.00 0.00 0.00 4.79
35 36 1.158434 TACGTTCAATTTGGGTCCGC 58.842 50.000 0.00 0.00 0.00 5.54
36 37 1.154301 CGTTCAATTTGGGTCCGCG 60.154 57.895 0.00 0.00 0.00 6.46
37 38 1.570347 CGTTCAATTTGGGTCCGCGA 61.570 55.000 8.23 0.00 0.00 5.87
38 39 0.109919 GTTCAATTTGGGTCCGCGAC 60.110 55.000 8.23 3.56 0.00 5.19
39 40 1.570347 TTCAATTTGGGTCCGCGACG 61.570 55.000 8.23 0.00 32.65 5.12
50 51 3.767230 CGCGACGGACAGCAAGTG 61.767 66.667 0.00 0.00 0.00 3.16
51 52 3.414700 GCGACGGACAGCAAGTGG 61.415 66.667 0.00 0.00 0.00 4.00
52 53 2.338620 CGACGGACAGCAAGTGGA 59.661 61.111 0.00 0.00 0.00 4.02
53 54 2.022129 CGACGGACAGCAAGTGGAC 61.022 63.158 0.00 0.00 0.00 4.02
54 55 1.069090 GACGGACAGCAAGTGGACA 59.931 57.895 0.00 0.00 0.00 4.02
55 56 0.531974 GACGGACAGCAAGTGGACAA 60.532 55.000 0.00 0.00 0.00 3.18
56 57 0.814010 ACGGACAGCAAGTGGACAAC 60.814 55.000 0.00 0.00 0.00 3.32
57 58 1.831389 CGGACAGCAAGTGGACAACG 61.831 60.000 0.00 0.00 0.00 4.10
58 59 1.507141 GGACAGCAAGTGGACAACGG 61.507 60.000 0.00 0.00 0.00 4.44
59 60 1.507141 GACAGCAAGTGGACAACGGG 61.507 60.000 0.00 0.00 0.00 5.28
60 61 2.594592 AGCAAGTGGACAACGGGC 60.595 61.111 0.00 0.00 34.21 6.13
61 62 4.025401 GCAAGTGGACAACGGGCG 62.025 66.667 0.00 0.00 0.00 6.13
62 63 3.353836 CAAGTGGACAACGGGCGG 61.354 66.667 0.00 0.00 0.00 6.13
63 64 3.552384 AAGTGGACAACGGGCGGA 61.552 61.111 0.00 0.00 0.00 5.54
64 65 3.819877 AAGTGGACAACGGGCGGAC 62.820 63.158 0.00 0.00 0.00 4.79
69 70 4.922026 ACAACGGGCGGACGCTTT 62.922 61.111 16.72 4.95 41.60 3.51
70 71 4.383602 CAACGGGCGGACGCTTTG 62.384 66.667 16.72 12.84 41.60 2.77
71 72 4.922026 AACGGGCGGACGCTTTGT 62.922 61.111 16.72 9.54 41.60 2.83
80 81 3.729004 GACGCTTTGTCCGTTTGAG 57.271 52.632 0.00 0.00 42.04 3.02
81 82 0.935196 GACGCTTTGTCCGTTTGAGT 59.065 50.000 0.00 0.00 42.04 3.41
82 83 0.935196 ACGCTTTGTCCGTTTGAGTC 59.065 50.000 0.00 0.00 34.96 3.36
83 84 0.111266 CGCTTTGTCCGTTTGAGTCG 60.111 55.000 0.00 0.00 0.00 4.18
84 85 0.384353 GCTTTGTCCGTTTGAGTCGC 60.384 55.000 0.00 0.00 0.00 5.19
85 86 0.234884 CTTTGTCCGTTTGAGTCGCC 59.765 55.000 0.00 0.00 0.00 5.54
86 87 0.179067 TTTGTCCGTTTGAGTCGCCT 60.179 50.000 0.00 0.00 0.00 5.52
87 88 0.599204 TTGTCCGTTTGAGTCGCCTC 60.599 55.000 0.00 0.00 38.27 4.70
88 89 2.087009 GTCCGTTTGAGTCGCCTCG 61.087 63.158 0.00 0.00 40.85 4.63
89 90 2.049433 CCGTTTGAGTCGCCTCGT 60.049 61.111 0.00 0.00 40.85 4.18
90 91 1.663702 CCGTTTGAGTCGCCTCGTT 60.664 57.895 0.00 0.00 40.85 3.85
91 92 1.487231 CGTTTGAGTCGCCTCGTTG 59.513 57.895 0.00 0.00 40.85 4.10
92 93 0.937699 CGTTTGAGTCGCCTCGTTGA 60.938 55.000 0.00 0.00 40.85 3.18
93 94 0.784778 GTTTGAGTCGCCTCGTTGAG 59.215 55.000 0.00 0.00 40.85 3.02
94 95 0.944311 TTTGAGTCGCCTCGTTGAGC 60.944 55.000 0.00 0.00 40.85 4.26
95 96 2.507324 GAGTCGCCTCGTTGAGCC 60.507 66.667 0.00 0.00 0.00 4.70
96 97 3.282745 GAGTCGCCTCGTTGAGCCA 62.283 63.158 0.00 0.00 0.00 4.75
97 98 2.125512 GTCGCCTCGTTGAGCCAT 60.126 61.111 0.00 0.00 0.00 4.40
98 99 1.741770 GTCGCCTCGTTGAGCCATT 60.742 57.895 0.00 0.00 0.00 3.16
99 100 1.003839 TCGCCTCGTTGAGCCATTT 60.004 52.632 0.00 0.00 0.00 2.32
100 101 0.605319 TCGCCTCGTTGAGCCATTTT 60.605 50.000 0.00 0.00 0.00 1.82
101 102 0.240945 CGCCTCGTTGAGCCATTTTT 59.759 50.000 0.00 0.00 0.00 1.94
118 119 3.791953 TTTTTCTGTCCGGATAACCCA 57.208 42.857 7.81 0.00 34.14 4.51
119 120 3.791953 TTTTCTGTCCGGATAACCCAA 57.208 42.857 7.81 0.00 34.14 4.12
120 121 3.791953 TTTCTGTCCGGATAACCCAAA 57.208 42.857 7.81 0.00 34.14 3.28
121 122 4.310022 TTTCTGTCCGGATAACCCAAAT 57.690 40.909 7.81 0.00 34.14 2.32
122 123 3.275617 TCTGTCCGGATAACCCAAATG 57.724 47.619 7.81 0.00 34.14 2.32
123 124 2.092646 TCTGTCCGGATAACCCAAATGG 60.093 50.000 7.81 0.00 41.37 3.16
124 125 1.916874 TGTCCGGATAACCCAAATGGA 59.083 47.619 7.81 0.00 37.39 3.41
125 126 2.512056 TGTCCGGATAACCCAAATGGAT 59.488 45.455 7.81 0.00 37.39 3.41
126 127 3.717392 TGTCCGGATAACCCAAATGGATA 59.283 43.478 7.81 0.00 37.39 2.59
127 128 4.166337 TGTCCGGATAACCCAAATGGATAA 59.834 41.667 7.81 0.00 37.39 1.75
128 129 5.134661 GTCCGGATAACCCAAATGGATAAA 58.865 41.667 7.81 0.00 37.39 1.40
129 130 5.595133 GTCCGGATAACCCAAATGGATAAAA 59.405 40.000 7.81 0.00 37.39 1.52
130 131 6.266786 GTCCGGATAACCCAAATGGATAAAAT 59.733 38.462 7.81 0.00 37.39 1.82
131 132 6.266558 TCCGGATAACCCAAATGGATAAAATG 59.733 38.462 0.00 0.00 37.39 2.32
132 133 6.454795 CGGATAACCCAAATGGATAAAATGG 58.545 40.000 0.00 0.00 37.39 3.16
136 137 4.320608 CCCAAATGGATAAAATGGGTCG 57.679 45.455 0.00 0.00 44.67 4.79
137 138 3.492482 CCCAAATGGATAAAATGGGTCGC 60.492 47.826 0.00 0.00 44.67 5.19
138 139 3.384467 CCAAATGGATAAAATGGGTCGCT 59.616 43.478 0.00 0.00 37.39 4.93
139 140 4.499696 CCAAATGGATAAAATGGGTCGCTC 60.500 45.833 0.00 0.00 37.39 5.03
140 141 3.864789 ATGGATAAAATGGGTCGCTCT 57.135 42.857 0.00 0.00 0.00 4.09
141 142 4.974645 ATGGATAAAATGGGTCGCTCTA 57.025 40.909 0.00 0.00 0.00 2.43
142 143 4.974645 TGGATAAAATGGGTCGCTCTAT 57.025 40.909 0.00 0.00 0.00 1.98
143 144 5.304686 TGGATAAAATGGGTCGCTCTATT 57.695 39.130 0.00 0.00 0.00 1.73
144 145 5.063204 TGGATAAAATGGGTCGCTCTATTG 58.937 41.667 0.00 0.00 0.00 1.90
145 146 5.163248 TGGATAAAATGGGTCGCTCTATTGA 60.163 40.000 0.00 0.00 0.00 2.57
146 147 5.763204 GGATAAAATGGGTCGCTCTATTGAA 59.237 40.000 0.00 0.00 0.00 2.69
147 148 6.073003 GGATAAAATGGGTCGCTCTATTGAAG 60.073 42.308 0.00 0.00 0.00 3.02
148 149 3.914426 AATGGGTCGCTCTATTGAAGT 57.086 42.857 0.00 0.00 0.00 3.01
149 150 3.914426 ATGGGTCGCTCTATTGAAGTT 57.086 42.857 0.00 0.00 0.00 2.66
150 151 2.972625 TGGGTCGCTCTATTGAAGTTG 58.027 47.619 0.00 0.00 0.00 3.16
151 152 1.666189 GGGTCGCTCTATTGAAGTTGC 59.334 52.381 0.00 0.00 0.00 4.17
152 153 2.622436 GGTCGCTCTATTGAAGTTGCT 58.378 47.619 0.00 0.00 0.00 3.91
153 154 2.605366 GGTCGCTCTATTGAAGTTGCTC 59.395 50.000 0.00 0.00 0.00 4.26
154 155 3.516615 GTCGCTCTATTGAAGTTGCTCT 58.483 45.455 0.00 0.00 0.00 4.09
155 156 4.440250 GGTCGCTCTATTGAAGTTGCTCTA 60.440 45.833 0.00 0.00 0.00 2.43
156 157 5.103000 GTCGCTCTATTGAAGTTGCTCTAA 58.897 41.667 0.00 0.00 0.00 2.10
157 158 5.231147 GTCGCTCTATTGAAGTTGCTCTAAG 59.769 44.000 0.00 0.00 0.00 2.18
158 159 5.105716 TCGCTCTATTGAAGTTGCTCTAAGT 60.106 40.000 0.00 0.00 0.00 2.24
159 160 6.095021 TCGCTCTATTGAAGTTGCTCTAAGTA 59.905 38.462 0.00 0.00 0.00 2.24
160 161 6.416455 CGCTCTATTGAAGTTGCTCTAAGTAG 59.584 42.308 0.00 0.00 0.00 2.57
161 162 7.262048 GCTCTATTGAAGTTGCTCTAAGTAGT 58.738 38.462 0.00 0.00 0.00 2.73
162 163 7.762159 GCTCTATTGAAGTTGCTCTAAGTAGTT 59.238 37.037 0.00 0.00 0.00 2.24
163 164 9.296400 CTCTATTGAAGTTGCTCTAAGTAGTTC 57.704 37.037 0.00 0.00 0.00 3.01
164 165 8.803235 TCTATTGAAGTTGCTCTAAGTAGTTCA 58.197 33.333 0.00 0.00 0.00 3.18
165 166 9.424319 CTATTGAAGTTGCTCTAAGTAGTTCAA 57.576 33.333 0.00 0.00 0.00 2.69
166 167 8.854614 ATTGAAGTTGCTCTAAGTAGTTCAAT 57.145 30.769 0.00 0.00 32.57 2.57
167 168 7.658179 TGAAGTTGCTCTAAGTAGTTCAATG 57.342 36.000 0.00 0.00 0.00 2.82
168 169 6.650807 TGAAGTTGCTCTAAGTAGTTCAATGG 59.349 38.462 0.00 0.00 0.00 3.16
169 170 4.938226 AGTTGCTCTAAGTAGTTCAATGGC 59.062 41.667 0.00 0.00 0.00 4.40
170 171 3.873910 TGCTCTAAGTAGTTCAATGGCC 58.126 45.455 0.00 0.00 0.00 5.36
171 172 3.263170 TGCTCTAAGTAGTTCAATGGCCA 59.737 43.478 8.56 8.56 0.00 5.36
172 173 3.623510 GCTCTAAGTAGTTCAATGGCCAC 59.376 47.826 8.16 0.00 0.00 5.01
173 174 3.857052 TCTAAGTAGTTCAATGGCCACG 58.143 45.455 8.16 1.50 0.00 4.94
174 175 2.851263 AAGTAGTTCAATGGCCACGA 57.149 45.000 8.16 4.72 0.00 4.35
175 176 2.386661 AGTAGTTCAATGGCCACGAG 57.613 50.000 8.16 0.00 0.00 4.18
176 177 0.727398 GTAGTTCAATGGCCACGAGC 59.273 55.000 8.16 10.45 42.60 5.03
191 192 4.326227 AGCCCACGACCCCACCTA 62.326 66.667 0.00 0.00 0.00 3.08
192 193 3.782443 GCCCACGACCCCACCTAG 61.782 72.222 0.00 0.00 0.00 3.02
193 194 3.782443 CCCACGACCCCACCTAGC 61.782 72.222 0.00 0.00 0.00 3.42
194 195 2.683933 CCACGACCCCACCTAGCT 60.684 66.667 0.00 0.00 0.00 3.32
195 196 2.579201 CACGACCCCACCTAGCTG 59.421 66.667 0.00 0.00 0.00 4.24
196 197 2.683933 ACGACCCCACCTAGCTGG 60.684 66.667 0.00 0.00 42.93 4.85
197 198 4.162690 CGACCCCACCTAGCTGGC 62.163 72.222 0.00 0.00 40.22 4.85
198 199 2.689034 GACCCCACCTAGCTGGCT 60.689 66.667 0.00 0.00 40.22 4.75
199 200 2.204151 ACCCCACCTAGCTGGCTT 60.204 61.111 0.00 0.00 40.22 4.35
200 201 2.273449 CCCCACCTAGCTGGCTTG 59.727 66.667 0.00 0.00 40.22 4.01
201 202 2.606587 CCCCACCTAGCTGGCTTGT 61.607 63.158 0.00 0.00 40.22 3.16
202 203 1.377725 CCCACCTAGCTGGCTTGTG 60.378 63.158 14.04 14.04 40.22 3.33
203 204 1.376466 CCACCTAGCTGGCTTGTGT 59.624 57.895 17.34 7.71 40.22 3.72
204 205 0.957395 CCACCTAGCTGGCTTGTGTG 60.957 60.000 17.34 15.43 40.22 3.82
205 206 0.957395 CACCTAGCTGGCTTGTGTGG 60.957 60.000 0.00 0.00 40.22 4.17
206 207 1.376466 CCTAGCTGGCTTGTGTGGT 59.624 57.895 0.00 0.00 0.00 4.16
207 208 0.613260 CCTAGCTGGCTTGTGTGGTA 59.387 55.000 0.00 0.00 0.00 3.25
208 209 1.210478 CCTAGCTGGCTTGTGTGGTAT 59.790 52.381 0.00 0.00 0.00 2.73
209 210 2.434336 CCTAGCTGGCTTGTGTGGTATA 59.566 50.000 0.00 0.00 0.00 1.47
210 211 2.403252 AGCTGGCTTGTGTGGTATAC 57.597 50.000 0.00 0.00 0.00 1.47
211 212 1.628340 AGCTGGCTTGTGTGGTATACA 59.372 47.619 5.01 0.00 36.82 2.29
212 213 2.239654 AGCTGGCTTGTGTGGTATACAT 59.760 45.455 5.01 0.00 42.24 2.29
213 214 2.355756 GCTGGCTTGTGTGGTATACATG 59.644 50.000 5.01 0.00 42.24 3.21
214 215 3.872696 CTGGCTTGTGTGGTATACATGA 58.127 45.455 5.01 0.00 42.24 3.07
215 216 3.605634 TGGCTTGTGTGGTATACATGAC 58.394 45.455 5.01 0.00 42.24 3.06
216 217 2.943033 GGCTTGTGTGGTATACATGACC 59.057 50.000 5.01 0.00 42.24 4.02
217 218 3.605634 GCTTGTGTGGTATACATGACCA 58.394 45.455 5.01 0.00 44.86 4.02
223 224 3.819564 TGGTATACATGACCAGCAGAC 57.180 47.619 5.01 0.00 42.15 3.51
224 225 3.103742 TGGTATACATGACCAGCAGACA 58.896 45.455 5.01 0.00 42.15 3.41
225 226 3.517500 TGGTATACATGACCAGCAGACAA 59.482 43.478 5.01 0.00 42.15 3.18
226 227 3.871594 GGTATACATGACCAGCAGACAAC 59.128 47.826 5.01 0.00 36.91 3.32
227 228 2.472695 TACATGACCAGCAGACAACC 57.527 50.000 0.00 0.00 0.00 3.77
228 229 0.767375 ACATGACCAGCAGACAACCT 59.233 50.000 0.00 0.00 0.00 3.50
229 230 1.271054 ACATGACCAGCAGACAACCTC 60.271 52.381 0.00 0.00 0.00 3.85
230 231 0.036952 ATGACCAGCAGACAACCTCG 60.037 55.000 0.00 0.00 0.00 4.63
231 232 1.367840 GACCAGCAGACAACCTCGT 59.632 57.895 0.00 0.00 0.00 4.18
232 233 0.601558 GACCAGCAGACAACCTCGTA 59.398 55.000 0.00 0.00 0.00 3.43
233 234 1.204941 GACCAGCAGACAACCTCGTAT 59.795 52.381 0.00 0.00 0.00 3.06
234 235 1.066858 ACCAGCAGACAACCTCGTATG 60.067 52.381 0.00 0.00 0.00 2.39
238 239 2.370281 CAGACAACCTCGTATGCAGT 57.630 50.000 0.00 0.00 0.00 4.40
239 240 2.688507 CAGACAACCTCGTATGCAGTT 58.311 47.619 0.00 0.00 0.00 3.16
240 241 2.668457 CAGACAACCTCGTATGCAGTTC 59.332 50.000 0.00 0.00 0.00 3.01
241 242 2.299013 AGACAACCTCGTATGCAGTTCA 59.701 45.455 0.00 0.00 0.00 3.18
242 243 2.412089 GACAACCTCGTATGCAGTTCAC 59.588 50.000 0.00 0.00 0.00 3.18
243 244 1.732259 CAACCTCGTATGCAGTTCACC 59.268 52.381 0.00 0.00 0.00 4.02
244 245 0.973632 ACCTCGTATGCAGTTCACCA 59.026 50.000 0.00 0.00 0.00 4.17
245 246 1.066858 ACCTCGTATGCAGTTCACCAG 60.067 52.381 0.00 0.00 0.00 4.00
246 247 1.204704 CCTCGTATGCAGTTCACCAGA 59.795 52.381 0.00 0.00 0.00 3.86
247 248 2.263077 CTCGTATGCAGTTCACCAGAC 58.737 52.381 0.00 0.00 0.00 3.51
248 249 1.893137 TCGTATGCAGTTCACCAGACT 59.107 47.619 0.00 0.00 0.00 3.24
249 250 2.299013 TCGTATGCAGTTCACCAGACTT 59.701 45.455 0.00 0.00 0.00 3.01
250 251 3.508402 TCGTATGCAGTTCACCAGACTTA 59.492 43.478 0.00 0.00 0.00 2.24
251 252 4.021807 TCGTATGCAGTTCACCAGACTTAA 60.022 41.667 0.00 0.00 0.00 1.85
252 253 4.091509 CGTATGCAGTTCACCAGACTTAAC 59.908 45.833 0.00 0.00 0.00 2.01
253 254 3.552132 TGCAGTTCACCAGACTTAACA 57.448 42.857 0.00 0.00 0.00 2.41
254 255 3.879998 TGCAGTTCACCAGACTTAACAA 58.120 40.909 0.00 0.00 0.00 2.83
255 256 4.265893 TGCAGTTCACCAGACTTAACAAA 58.734 39.130 0.00 0.00 0.00 2.83
256 257 4.702612 TGCAGTTCACCAGACTTAACAAAA 59.297 37.500 0.00 0.00 0.00 2.44
257 258 5.163663 TGCAGTTCACCAGACTTAACAAAAG 60.164 40.000 0.00 0.00 0.00 2.27
258 259 5.065988 GCAGTTCACCAGACTTAACAAAAGA 59.934 40.000 0.00 0.00 0.00 2.52
259 260 6.719365 CAGTTCACCAGACTTAACAAAAGAG 58.281 40.000 0.00 0.00 0.00 2.85
260 261 6.538742 CAGTTCACCAGACTTAACAAAAGAGA 59.461 38.462 0.00 0.00 0.00 3.10
261 262 7.227512 CAGTTCACCAGACTTAACAAAAGAGAT 59.772 37.037 0.00 0.00 0.00 2.75
262 263 7.227512 AGTTCACCAGACTTAACAAAAGAGATG 59.772 37.037 0.00 0.00 0.00 2.90
263 264 6.826668 TCACCAGACTTAACAAAAGAGATGA 58.173 36.000 0.00 0.00 0.00 2.92
264 265 6.931281 TCACCAGACTTAACAAAAGAGATGAG 59.069 38.462 0.00 0.00 0.00 2.90
265 266 6.931281 CACCAGACTTAACAAAAGAGATGAGA 59.069 38.462 0.00 0.00 0.00 3.27
266 267 7.117523 CACCAGACTTAACAAAAGAGATGAGAG 59.882 40.741 0.00 0.00 0.00 3.20
267 268 6.593382 CCAGACTTAACAAAAGAGATGAGAGG 59.407 42.308 0.00 0.00 0.00 3.69
268 269 7.158021 CAGACTTAACAAAAGAGATGAGAGGT 58.842 38.462 0.00 0.00 0.00 3.85
269 270 8.307483 CAGACTTAACAAAAGAGATGAGAGGTA 58.693 37.037 0.00 0.00 0.00 3.08
270 271 8.871125 AGACTTAACAAAAGAGATGAGAGGTAA 58.129 33.333 0.00 0.00 0.00 2.85
271 272 9.490379 GACTTAACAAAAGAGATGAGAGGTAAA 57.510 33.333 0.00 0.00 0.00 2.01
272 273 9.847224 ACTTAACAAAAGAGATGAGAGGTAAAA 57.153 29.630 0.00 0.00 0.00 1.52
276 277 8.697507 ACAAAAGAGATGAGAGGTAAAAATGT 57.302 30.769 0.00 0.00 0.00 2.71
277 278 8.787852 ACAAAAGAGATGAGAGGTAAAAATGTC 58.212 33.333 0.00 0.00 0.00 3.06
278 279 8.786898 CAAAAGAGATGAGAGGTAAAAATGTCA 58.213 33.333 0.00 0.00 0.00 3.58
279 280 9.525826 AAAAGAGATGAGAGGTAAAAATGTCAT 57.474 29.630 0.00 0.00 32.59 3.06
280 281 8.503458 AAGAGATGAGAGGTAAAAATGTCATG 57.497 34.615 0.00 0.00 30.28 3.07
281 282 7.628234 AGAGATGAGAGGTAAAAATGTCATGT 58.372 34.615 0.00 0.00 30.28 3.21
282 283 7.551974 AGAGATGAGAGGTAAAAATGTCATGTG 59.448 37.037 0.00 0.00 30.28 3.21
283 284 6.600822 AGATGAGAGGTAAAAATGTCATGTGG 59.399 38.462 0.00 0.00 30.28 4.17
284 285 5.630121 TGAGAGGTAAAAATGTCATGTGGT 58.370 37.500 0.00 0.00 0.00 4.16
285 286 5.705441 TGAGAGGTAAAAATGTCATGTGGTC 59.295 40.000 0.00 0.00 0.00 4.02
286 287 5.010282 AGAGGTAAAAATGTCATGTGGTCC 58.990 41.667 0.00 0.00 0.00 4.46
287 288 4.735369 AGGTAAAAATGTCATGTGGTCCA 58.265 39.130 0.00 0.00 0.00 4.02
288 289 5.332743 AGGTAAAAATGTCATGTGGTCCAT 58.667 37.500 0.00 0.00 0.00 3.41
297 298 1.265095 CATGTGGTCCATGCTAATCGC 59.735 52.381 0.00 0.00 44.21 4.58
298 299 0.541392 TGTGGTCCATGCTAATCGCT 59.459 50.000 0.00 0.00 40.11 4.93
299 300 1.760029 TGTGGTCCATGCTAATCGCTA 59.240 47.619 0.00 0.00 40.11 4.26
300 301 2.224042 TGTGGTCCATGCTAATCGCTAG 60.224 50.000 0.00 0.00 40.11 3.42
312 313 5.741388 CTAATCGCTAGCTGGTGAAAATT 57.259 39.130 17.72 9.96 0.00 1.82
313 314 4.622701 AATCGCTAGCTGGTGAAAATTC 57.377 40.909 17.72 0.00 0.00 2.17
314 315 3.052455 TCGCTAGCTGGTGAAAATTCA 57.948 42.857 11.29 0.00 34.20 2.57
315 316 3.609853 TCGCTAGCTGGTGAAAATTCAT 58.390 40.909 11.29 0.00 39.73 2.57
316 317 4.009675 TCGCTAGCTGGTGAAAATTCATT 58.990 39.130 11.29 0.00 39.73 2.57
317 318 4.458989 TCGCTAGCTGGTGAAAATTCATTT 59.541 37.500 11.29 0.00 39.73 2.32
318 319 4.795278 CGCTAGCTGGTGAAAATTCATTTC 59.205 41.667 13.93 0.00 46.30 2.17
331 332 7.837202 AAAATTCATTTCAGCATGTATGTGG 57.163 32.000 0.00 0.00 37.40 4.17
332 333 4.374843 TTCATTTCAGCATGTATGTGGC 57.625 40.909 0.00 0.00 37.40 5.01
333 334 2.689471 TCATTTCAGCATGTATGTGGCC 59.311 45.455 0.00 0.00 37.40 5.36
334 335 2.212812 TTTCAGCATGTATGTGGCCA 57.787 45.000 0.00 0.00 37.40 5.36
335 336 1.462616 TTCAGCATGTATGTGGCCAC 58.537 50.000 29.67 29.67 37.40 5.01
336 337 0.327591 TCAGCATGTATGTGGCCACA 59.672 50.000 39.23 39.23 41.13 4.17
337 338 0.452987 CAGCATGTATGTGGCCACAC 59.547 55.000 39.95 27.84 45.05 3.82
338 339 4.269517 TCAGCATGTATGTGGCCACACT 62.270 50.000 39.95 27.19 42.43 3.55
415 420 6.166279 ACTTAGACCCATATATTGTCGCATG 58.834 40.000 6.53 0.00 34.24 4.06
456 461 5.823209 TGAGATAGCATCACCAATTTGTG 57.177 39.130 3.27 3.27 37.59 3.33
493 498 4.616802 CGTTACAAGCATCAATTTGTCCAC 59.383 41.667 0.00 0.00 38.41 4.02
495 500 4.510038 ACAAGCATCAATTTGTCCACTC 57.490 40.909 0.00 0.00 32.32 3.51
496 501 3.890756 ACAAGCATCAATTTGTCCACTCA 59.109 39.130 0.00 0.00 32.32 3.41
497 502 4.022589 ACAAGCATCAATTTGTCCACTCAG 60.023 41.667 0.00 0.00 32.32 3.35
498 503 3.087031 AGCATCAATTTGTCCACTCAGG 58.913 45.455 0.00 0.00 39.47 3.86
528 533 5.408604 ACAGGAAACGAGATATTGTTGTCAC 59.591 40.000 0.00 0.00 0.00 3.67
550 555 9.271828 GTCACTTTGGGATTTTGTTTGAAATAT 57.728 29.630 0.00 0.00 29.75 1.28
576 581 4.668118 TCGGTTCGGGGCGTTGTC 62.668 66.667 0.00 0.00 0.00 3.18
594 599 1.448540 CATGGCGTCCACCACTCTC 60.449 63.158 0.50 0.00 44.17 3.20
622 627 5.008619 TGTTTTTGATGACTGTGTGCATT 57.991 34.783 0.00 0.00 0.00 3.56
625 630 6.035866 TGTTTTTGATGACTGTGTGCATTTTC 59.964 34.615 0.00 0.00 0.00 2.29
626 631 4.915158 TTGATGACTGTGTGCATTTTCA 57.085 36.364 0.00 0.00 0.00 2.69
627 632 4.915158 TGATGACTGTGTGCATTTTCAA 57.085 36.364 0.00 0.00 0.00 2.69
628 633 4.862350 TGATGACTGTGTGCATTTTCAAG 58.138 39.130 0.00 0.00 0.00 3.02
629 634 3.082698 TGACTGTGTGCATTTTCAAGC 57.917 42.857 0.00 0.00 0.00 4.01
630 635 2.689471 TGACTGTGTGCATTTTCAAGCT 59.311 40.909 0.00 0.00 0.00 3.74
631 636 3.130869 TGACTGTGTGCATTTTCAAGCTT 59.869 39.130 0.00 0.00 0.00 3.74
632 637 4.114794 GACTGTGTGCATTTTCAAGCTTT 58.885 39.130 0.00 0.00 0.00 3.51
633 638 4.114794 ACTGTGTGCATTTTCAAGCTTTC 58.885 39.130 0.00 0.00 0.00 2.62
634 639 4.142093 ACTGTGTGCATTTTCAAGCTTTCT 60.142 37.500 0.00 0.00 0.00 2.52
635 640 4.757594 TGTGTGCATTTTCAAGCTTTCTT 58.242 34.783 0.00 0.00 0.00 2.52
636 641 4.805192 TGTGTGCATTTTCAAGCTTTCTTC 59.195 37.500 0.00 0.00 0.00 2.87
641 668 7.763528 TGTGCATTTTCAAGCTTTCTTCTTTAA 59.236 29.630 0.00 0.00 0.00 1.52
675 702 3.309954 AGCTCACGAGTCAAACAAGAAAC 59.690 43.478 0.00 0.00 0.00 2.78
677 704 4.436852 GCTCACGAGTCAAACAAGAAACAA 60.437 41.667 0.00 0.00 0.00 2.83
683 710 7.164171 CACGAGTCAAACAAGAAACAACTAATG 59.836 37.037 0.00 0.00 0.00 1.90
734 761 8.262227 TGAAGAAGGTTTTGACAGTAGAAACTA 58.738 33.333 9.80 0.00 33.48 2.24
840 872 2.032680 TGGCCGTAGAAATTACCTGC 57.967 50.000 0.00 0.00 0.00 4.85
843 875 2.572290 GCCGTAGAAATTACCTGCCAT 58.428 47.619 0.00 0.00 0.00 4.40
862 894 4.491676 CCATTTTCCATCAGCTGACAAAG 58.508 43.478 20.97 9.36 0.00 2.77
863 895 4.021719 CCATTTTCCATCAGCTGACAAAGT 60.022 41.667 20.97 12.01 0.00 2.66
864 896 5.183713 CCATTTTCCATCAGCTGACAAAGTA 59.816 40.000 20.97 4.14 0.00 2.24
871 903 6.995686 TCCATCAGCTGACAAAGTACTTAAAA 59.004 34.615 20.97 0.00 0.00 1.52
877 909 9.979270 CAGCTGACAAAGTACTTAAAATATGAG 57.021 33.333 8.42 0.00 0.00 2.90
878 910 9.167311 AGCTGACAAAGTACTTAAAATATGAGG 57.833 33.333 8.92 0.62 0.00 3.86
885 917 5.823045 AGTACTTAAAATATGAGGCCAGTGC 59.177 40.000 5.01 0.00 0.00 4.40
902 935 0.033504 TGCCTTCTCGGTGAGTTGAC 59.966 55.000 0.00 0.00 34.25 3.18
915 948 4.321008 GGTGAGTTGACGAGATCACAGTAA 60.321 45.833 6.52 0.00 43.03 2.24
1212 1257 3.138798 GCGCGTCTCTACCTCCCA 61.139 66.667 8.43 0.00 0.00 4.37
1298 1352 1.183030 TTCTCCGCCTTCGACTCCAA 61.183 55.000 0.00 0.00 38.10 3.53
1602 1692 0.770557 TCCTGGTGCACCCCTACTTT 60.771 55.000 32.62 0.00 34.29 2.66
2021 2114 3.320541 AGAGGAAGAGTCAACTGTGTCTG 59.679 47.826 0.00 0.00 0.00 3.51
2022 2115 2.366916 AGGAAGAGTCAACTGTGTCTGG 59.633 50.000 0.00 0.00 0.00 3.86
2260 2364 4.939052 AACTATTACACTATGGCTCGCT 57.061 40.909 0.00 0.00 0.00 4.93
2521 2701 0.398318 GTATGGGATGGTGGAGCCTC 59.602 60.000 0.00 0.00 38.35 4.70
2555 2735 4.639755 TGTGCTTTCATGTGTCAGAGAAAA 59.360 37.500 0.00 0.00 30.49 2.29
2558 2738 7.013178 TGTGCTTTCATGTGTCAGAGAAAAATA 59.987 33.333 0.00 0.00 30.49 1.40
2609 2901 2.497138 TGCATGGCATCGGATCTTAAG 58.503 47.619 0.00 0.00 31.71 1.85
2680 3329 7.869800 AGAATTGCTTTTCTCTAACTTCACTG 58.130 34.615 0.00 0.00 29.99 3.66
2681 3330 7.500559 AGAATTGCTTTTCTCTAACTTCACTGT 59.499 33.333 0.00 0.00 29.99 3.55
2683 3332 8.854614 ATTGCTTTTCTCTAACTTCACTGTAT 57.145 30.769 0.00 0.00 0.00 2.29
2684 3333 9.944376 ATTGCTTTTCTCTAACTTCACTGTATA 57.056 29.630 0.00 0.00 0.00 1.47
2686 3335 8.585881 TGCTTTTCTCTAACTTCACTGTATACT 58.414 33.333 4.17 0.00 0.00 2.12
2687 3336 9.078753 GCTTTTCTCTAACTTCACTGTATACTC 57.921 37.037 4.17 0.00 0.00 2.59
2691 3340 9.516546 TTCTCTAACTTCACTGTATACTCTTGA 57.483 33.333 4.17 1.39 0.00 3.02
2692 3341 9.516546 TCTCTAACTTCACTGTATACTCTTGAA 57.483 33.333 4.17 8.81 0.00 2.69
2710 3359 9.088512 ACTCTTGAAATAATAACTGTAGCTTCG 57.911 33.333 0.00 0.00 0.00 3.79
2711 3360 8.997621 TCTTGAAATAATAACTGTAGCTTCGT 57.002 30.769 0.00 0.00 0.00 3.85
2712 3361 9.084164 TCTTGAAATAATAACTGTAGCTTCGTC 57.916 33.333 0.00 0.00 0.00 4.20
2713 3362 7.445900 TGAAATAATAACTGTAGCTTCGTCG 57.554 36.000 0.00 0.00 0.00 5.12
2715 3364 2.205307 ATAACTGTAGCTTCGTCGCC 57.795 50.000 0.00 0.00 0.00 5.54
2716 3365 0.179181 TAACTGTAGCTTCGTCGCCG 60.179 55.000 0.00 0.00 0.00 6.46
2717 3366 1.859427 AACTGTAGCTTCGTCGCCGA 61.859 55.000 0.00 0.00 42.41 5.54
2720 3369 1.063649 GTAGCTTCGTCGCCGATGA 59.936 57.895 4.61 4.61 43.80 2.92
2721 3370 0.524816 GTAGCTTCGTCGCCGATGAA 60.525 55.000 19.64 19.64 43.80 2.57
2722 3371 0.384309 TAGCTTCGTCGCCGATGAAT 59.616 50.000 20.89 10.75 43.80 2.57
2723 3372 0.384309 AGCTTCGTCGCCGATGAATA 59.616 50.000 20.89 1.41 43.80 1.75
2734 4682 2.799917 GCCGATGAATACTGCTTCGTCT 60.800 50.000 9.65 0.00 38.48 4.18
2735 4683 3.550233 GCCGATGAATACTGCTTCGTCTA 60.550 47.826 9.65 0.00 38.48 2.59
2736 4684 3.975670 CCGATGAATACTGCTTCGTCTAC 59.024 47.826 9.65 0.00 38.48 2.59
2737 4685 4.261238 CCGATGAATACTGCTTCGTCTACT 60.261 45.833 9.65 0.00 38.48 2.57
2738 4686 5.049612 CCGATGAATACTGCTTCGTCTACTA 60.050 44.000 9.65 0.00 38.48 1.82
2778 4726 6.097839 TCCGGTTTATAACTCTAGCAGACATT 59.902 38.462 0.00 0.00 0.00 2.71
2780 4728 6.978659 CGGTTTATAACTCTAGCAGACATTCA 59.021 38.462 0.00 0.00 0.00 2.57
2782 4730 9.162764 GGTTTATAACTCTAGCAGACATTCAAA 57.837 33.333 0.00 0.00 0.00 2.69
2808 4756 4.615588 TTTTTGGGCTAATCAAAGGGTG 57.384 40.909 0.00 0.00 35.81 4.61
2809 4757 3.534357 TTTGGGCTAATCAAAGGGTGA 57.466 42.857 0.00 0.00 41.67 4.02
2819 4767 4.598036 ATCAAAGGGTGATTCATCCAGT 57.402 40.909 18.15 2.63 45.13 4.00
2820 4768 4.387026 TCAAAGGGTGATTCATCCAGTT 57.613 40.909 18.15 8.66 37.04 3.16
2821 4769 4.739793 TCAAAGGGTGATTCATCCAGTTT 58.260 39.130 18.15 7.90 37.04 2.66
2822 4770 5.147032 TCAAAGGGTGATTCATCCAGTTTT 58.853 37.500 18.15 7.22 37.04 2.43
2823 4771 6.310941 TCAAAGGGTGATTCATCCAGTTTTA 58.689 36.000 18.15 0.31 37.04 1.52
2824 4772 6.953520 TCAAAGGGTGATTCATCCAGTTTTAT 59.046 34.615 18.15 0.00 37.04 1.40
2825 4773 6.780457 AAGGGTGATTCATCCAGTTTTATG 57.220 37.500 18.15 0.00 37.04 1.90
2826 4774 4.646492 AGGGTGATTCATCCAGTTTTATGC 59.354 41.667 18.15 0.00 37.04 3.14
2827 4775 4.402155 GGGTGATTCATCCAGTTTTATGCA 59.598 41.667 11.24 0.00 34.21 3.96
2828 4776 5.069516 GGGTGATTCATCCAGTTTTATGCAT 59.930 40.000 11.24 3.79 34.21 3.96
2829 4777 5.981315 GGTGATTCATCCAGTTTTATGCATG 59.019 40.000 10.16 0.00 0.00 4.06
2830 4778 6.406177 GGTGATTCATCCAGTTTTATGCATGT 60.406 38.462 10.16 0.00 0.00 3.21
2831 4779 6.694411 GTGATTCATCCAGTTTTATGCATGTC 59.306 38.462 10.16 0.00 0.00 3.06
2832 4780 4.880886 TCATCCAGTTTTATGCATGTCG 57.119 40.909 10.16 0.00 0.00 4.35
2833 4781 3.627123 TCATCCAGTTTTATGCATGTCGG 59.373 43.478 10.16 1.34 0.00 4.79
2834 4782 3.342377 TCCAGTTTTATGCATGTCGGA 57.658 42.857 10.16 3.83 0.00 4.55
2835 4783 3.270027 TCCAGTTTTATGCATGTCGGAG 58.730 45.455 10.16 0.00 0.00 4.63
2836 4784 2.355756 CCAGTTTTATGCATGTCGGAGG 59.644 50.000 10.16 0.93 0.00 4.30
2837 4785 3.270027 CAGTTTTATGCATGTCGGAGGA 58.730 45.455 10.16 0.00 0.00 3.71
2838 4786 3.063997 CAGTTTTATGCATGTCGGAGGAC 59.936 47.826 10.16 0.00 43.71 3.85
2839 4787 2.325583 TTTATGCATGTCGGAGGACC 57.674 50.000 10.16 0.00 42.73 4.46
2840 4788 1.199615 TTATGCATGTCGGAGGACCA 58.800 50.000 10.16 0.00 42.73 4.02
2841 4789 1.199615 TATGCATGTCGGAGGACCAA 58.800 50.000 10.16 0.00 42.73 3.67
2842 4790 0.327924 ATGCATGTCGGAGGACCAAA 59.672 50.000 0.00 0.00 42.73 3.28
2843 4791 0.109532 TGCATGTCGGAGGACCAAAA 59.890 50.000 0.00 0.00 42.73 2.44
2844 4792 0.521735 GCATGTCGGAGGACCAAAAC 59.478 55.000 0.00 0.00 42.73 2.43
2845 4793 1.165270 CATGTCGGAGGACCAAAACC 58.835 55.000 0.00 0.00 42.73 3.27
2846 4794 0.321298 ATGTCGGAGGACCAAAACCG 60.321 55.000 11.38 11.38 42.73 4.44
2847 4795 1.070275 GTCGGAGGACCAAAACCGT 59.930 57.895 15.25 0.00 44.72 4.83
2848 4796 0.947660 GTCGGAGGACCAAAACCGTC 60.948 60.000 15.25 9.04 44.72 4.79
2849 4797 2.025418 CGGAGGACCAAAACCGTCG 61.025 63.158 9.99 0.00 40.42 5.12
2850 4798 2.322830 GGAGGACCAAAACCGTCGC 61.323 63.158 0.00 0.00 35.97 5.19
2851 4799 2.281276 AGGACCAAAACCGTCGCC 60.281 61.111 0.00 0.00 0.00 5.54
2852 4800 3.719144 GGACCAAAACCGTCGCCG 61.719 66.667 0.00 0.00 0.00 6.46
2853 4801 2.662527 GACCAAAACCGTCGCCGA 60.663 61.111 0.00 0.00 35.63 5.54
2854 4802 2.030958 GACCAAAACCGTCGCCGAT 61.031 57.895 0.00 0.00 35.63 4.18
2855 4803 1.963190 GACCAAAACCGTCGCCGATC 61.963 60.000 0.00 0.00 35.63 3.69
2856 4804 2.030401 CCAAAACCGTCGCCGATCA 61.030 57.895 0.00 0.00 35.63 2.92
2857 4805 1.570347 CCAAAACCGTCGCCGATCAA 61.570 55.000 0.00 0.00 35.63 2.57
2858 4806 0.452122 CAAAACCGTCGCCGATCAAC 60.452 55.000 0.00 0.00 35.63 3.18
2859 4807 0.601841 AAAACCGTCGCCGATCAACT 60.602 50.000 0.00 0.00 35.63 3.16
2860 4808 1.012486 AAACCGTCGCCGATCAACTC 61.012 55.000 0.00 0.00 35.63 3.01
2861 4809 2.582498 CCGTCGCCGATCAACTCC 60.582 66.667 0.00 0.00 35.63 3.85
2862 4810 2.490217 CGTCGCCGATCAACTCCT 59.510 61.111 0.00 0.00 35.63 3.69
2863 4811 1.586564 CGTCGCCGATCAACTCCTC 60.587 63.158 0.00 0.00 35.63 3.71
2864 4812 1.586564 GTCGCCGATCAACTCCTCG 60.587 63.158 0.00 0.00 34.73 4.63
2865 4813 2.956964 CGCCGATCAACTCCTCGC 60.957 66.667 0.00 0.00 33.63 5.03
2866 4814 2.496817 GCCGATCAACTCCTCGCT 59.503 61.111 0.00 0.00 33.63 4.93
2867 4815 1.734137 GCCGATCAACTCCTCGCTA 59.266 57.895 0.00 0.00 33.63 4.26
2868 4816 0.315568 GCCGATCAACTCCTCGCTAT 59.684 55.000 0.00 0.00 33.63 2.97
2869 4817 1.932604 GCCGATCAACTCCTCGCTATG 60.933 57.143 0.00 0.00 33.63 2.23
2870 4818 1.609072 CCGATCAACTCCTCGCTATGA 59.391 52.381 0.00 0.00 33.63 2.15
2871 4819 2.351253 CCGATCAACTCCTCGCTATGAG 60.351 54.545 0.00 0.00 44.83 2.90
2872 4820 2.292016 CGATCAACTCCTCGCTATGAGT 59.708 50.000 0.00 0.00 43.64 3.41
2873 4821 3.637432 GATCAACTCCTCGCTATGAGTG 58.363 50.000 0.00 0.00 43.64 3.51
2874 4822 1.135139 TCAACTCCTCGCTATGAGTGC 59.865 52.381 0.00 0.00 43.64 4.40
2875 4823 1.135915 CAACTCCTCGCTATGAGTGCT 59.864 52.381 0.00 0.00 43.64 4.40
2876 4824 0.743688 ACTCCTCGCTATGAGTGCTG 59.256 55.000 0.00 0.00 43.64 4.41
2877 4825 0.031857 CTCCTCGCTATGAGTGCTGG 59.968 60.000 0.00 0.00 43.64 4.85
2878 4826 0.684479 TCCTCGCTATGAGTGCTGGT 60.684 55.000 0.00 0.00 43.64 4.00
2879 4827 0.529337 CCTCGCTATGAGTGCTGGTG 60.529 60.000 0.00 0.00 43.64 4.17
2880 4828 0.529337 CTCGCTATGAGTGCTGGTGG 60.529 60.000 0.00 0.00 40.03 4.61
2881 4829 0.970427 TCGCTATGAGTGCTGGTGGA 60.970 55.000 0.00 0.00 0.00 4.02
2882 4830 0.529337 CGCTATGAGTGCTGGTGGAG 60.529 60.000 0.00 0.00 0.00 3.86
2891 4839 4.790962 CTGGTGGAGCTGCGCCAT 62.791 66.667 36.43 0.00 35.49 4.40
2892 4840 4.349503 TGGTGGAGCTGCGCCATT 62.350 61.111 33.73 0.00 35.49 3.16
2893 4841 3.064324 GGTGGAGCTGCGCCATTT 61.064 61.111 30.57 0.00 35.49 2.32
2894 4842 2.180017 GTGGAGCTGCGCCATTTG 59.820 61.111 27.43 0.00 35.49 2.32
2895 4843 2.282391 TGGAGCTGCGCCATTTGT 60.282 55.556 21.52 0.00 0.00 2.83
2896 4844 1.902918 TGGAGCTGCGCCATTTGTT 60.903 52.632 21.52 0.00 0.00 2.83
2897 4845 1.290009 GGAGCTGCGCCATTTGTTT 59.710 52.632 17.92 0.00 0.00 2.83
2898 4846 0.319813 GGAGCTGCGCCATTTGTTTT 60.320 50.000 17.92 0.00 0.00 2.43
2899 4847 1.067915 GGAGCTGCGCCATTTGTTTTA 60.068 47.619 17.92 0.00 0.00 1.52
2900 4848 2.417243 GGAGCTGCGCCATTTGTTTTAT 60.417 45.455 17.92 0.00 0.00 1.40
2901 4849 3.253230 GAGCTGCGCCATTTGTTTTATT 58.747 40.909 4.18 0.00 0.00 1.40
2902 4850 3.663025 AGCTGCGCCATTTGTTTTATTT 58.337 36.364 4.18 0.00 0.00 1.40
2903 4851 4.064388 AGCTGCGCCATTTGTTTTATTTT 58.936 34.783 4.18 0.00 0.00 1.82
2904 4852 4.514816 AGCTGCGCCATTTGTTTTATTTTT 59.485 33.333 4.18 0.00 0.00 1.94
2930 4878 8.918202 TGAAAACCATACATCTCTAAAACTGT 57.082 30.769 0.00 0.00 0.00 3.55
2931 4879 8.783093 TGAAAACCATACATCTCTAAAACTGTG 58.217 33.333 0.00 0.00 0.00 3.66
2932 4880 8.918202 AAAACCATACATCTCTAAAACTGTGA 57.082 30.769 0.00 0.00 0.00 3.58
2933 4881 8.918202 AAACCATACATCTCTAAAACTGTGAA 57.082 30.769 0.00 0.00 0.00 3.18
2934 4882 8.918202 AACCATACATCTCTAAAACTGTGAAA 57.082 30.769 0.00 0.00 0.00 2.69
2935 4883 8.918202 ACCATACATCTCTAAAACTGTGAAAA 57.082 30.769 0.00 0.00 0.00 2.29
2936 4884 9.349713 ACCATACATCTCTAAAACTGTGAAAAA 57.650 29.630 0.00 0.00 0.00 1.94
2958 4906 8.522178 AAAAACGTTCAAACACAAAATACAGA 57.478 26.923 0.00 0.00 0.00 3.41
2959 4907 8.522178 AAAACGTTCAAACACAAAATACAGAA 57.478 26.923 0.00 0.00 0.00 3.02
2960 4908 7.734538 AACGTTCAAACACAAAATACAGAAG 57.265 32.000 0.00 0.00 0.00 2.85
2961 4909 7.079182 ACGTTCAAACACAAAATACAGAAGA 57.921 32.000 0.00 0.00 0.00 2.87
2962 4910 7.531716 ACGTTCAAACACAAAATACAGAAGAA 58.468 30.769 0.00 0.00 0.00 2.52
2963 4911 8.024285 ACGTTCAAACACAAAATACAGAAGAAA 58.976 29.630 0.00 0.00 0.00 2.52
2964 4912 8.855279 CGTTCAAACACAAAATACAGAAGAAAA 58.145 29.630 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.632807 CCAAATTGAACGTAAATATGGAAAGAA 57.367 29.630 0.00 0.00 0.00 2.52
5 6 8.032451 ACCCAAATTGAACGTAAATATGGAAAG 58.968 33.333 0.00 0.00 0.00 2.62
10 11 5.968848 CGGACCCAAATTGAACGTAAATATG 59.031 40.000 0.00 0.00 0.00 1.78
11 12 5.449451 GCGGACCCAAATTGAACGTAAATAT 60.449 40.000 0.00 0.00 0.00 1.28
12 13 4.142643 GCGGACCCAAATTGAACGTAAATA 60.143 41.667 0.00 0.00 0.00 1.40
13 14 3.366577 GCGGACCCAAATTGAACGTAAAT 60.367 43.478 0.00 0.00 0.00 1.40
14 15 2.030981 GCGGACCCAAATTGAACGTAAA 60.031 45.455 0.00 0.00 0.00 2.01
15 16 1.536331 GCGGACCCAAATTGAACGTAA 59.464 47.619 0.00 0.00 0.00 3.18
16 17 1.158434 GCGGACCCAAATTGAACGTA 58.842 50.000 0.00 0.00 0.00 3.57
17 18 1.847890 CGCGGACCCAAATTGAACGT 61.848 55.000 0.00 0.00 0.00 3.99
18 19 1.154301 CGCGGACCCAAATTGAACG 60.154 57.895 0.00 0.00 0.00 3.95
19 20 0.109919 GTCGCGGACCCAAATTGAAC 60.110 55.000 6.13 0.00 0.00 3.18
20 21 1.570347 CGTCGCGGACCCAAATTGAA 61.570 55.000 6.13 0.00 0.00 2.69
21 22 2.030401 CGTCGCGGACCCAAATTGA 61.030 57.895 6.13 0.00 0.00 2.57
22 23 2.478746 CGTCGCGGACCCAAATTG 59.521 61.111 6.13 0.00 0.00 2.32
33 34 3.767230 CACTTGCTGTCCGTCGCG 61.767 66.667 0.00 0.00 0.00 5.87
34 35 3.414700 CCACTTGCTGTCCGTCGC 61.415 66.667 0.00 0.00 0.00 5.19
35 36 2.022129 GTCCACTTGCTGTCCGTCG 61.022 63.158 0.00 0.00 0.00 5.12
36 37 0.531974 TTGTCCACTTGCTGTCCGTC 60.532 55.000 0.00 0.00 0.00 4.79
37 38 0.814010 GTTGTCCACTTGCTGTCCGT 60.814 55.000 0.00 0.00 0.00 4.69
38 39 1.831389 CGTTGTCCACTTGCTGTCCG 61.831 60.000 0.00 0.00 0.00 4.79
39 40 1.507141 CCGTTGTCCACTTGCTGTCC 61.507 60.000 0.00 0.00 0.00 4.02
40 41 1.507141 CCCGTTGTCCACTTGCTGTC 61.507 60.000 0.00 0.00 0.00 3.51
41 42 1.525995 CCCGTTGTCCACTTGCTGT 60.526 57.895 0.00 0.00 0.00 4.40
42 43 2.908073 GCCCGTTGTCCACTTGCTG 61.908 63.158 0.00 0.00 0.00 4.41
43 44 2.594592 GCCCGTTGTCCACTTGCT 60.595 61.111 0.00 0.00 0.00 3.91
44 45 4.025401 CGCCCGTTGTCCACTTGC 62.025 66.667 0.00 0.00 0.00 4.01
45 46 3.353836 CCGCCCGTTGTCCACTTG 61.354 66.667 0.00 0.00 0.00 3.16
46 47 3.552384 TCCGCCCGTTGTCCACTT 61.552 61.111 0.00 0.00 0.00 3.16
47 48 4.309950 GTCCGCCCGTTGTCCACT 62.310 66.667 0.00 0.00 0.00 4.00
52 53 4.922026 AAAGCGTCCGCCCGTTGT 62.922 61.111 8.23 0.00 43.17 3.32
53 54 4.383602 CAAAGCGTCCGCCCGTTG 62.384 66.667 8.23 6.96 43.17 4.10
54 55 4.922026 ACAAAGCGTCCGCCCGTT 62.922 61.111 8.23 0.00 43.17 4.44
62 63 0.935196 ACTCAAACGGACAAAGCGTC 59.065 50.000 0.00 0.00 44.57 5.19
63 64 0.935196 GACTCAAACGGACAAAGCGT 59.065 50.000 0.00 0.00 0.00 5.07
64 65 0.111266 CGACTCAAACGGACAAAGCG 60.111 55.000 0.00 0.00 0.00 4.68
65 66 0.384353 GCGACTCAAACGGACAAAGC 60.384 55.000 0.00 0.00 0.00 3.51
66 67 0.234884 GGCGACTCAAACGGACAAAG 59.765 55.000 0.00 0.00 0.00 2.77
67 68 0.179067 AGGCGACTCAAACGGACAAA 60.179 50.000 0.00 0.00 32.90 2.83
68 69 1.444250 AGGCGACTCAAACGGACAA 59.556 52.632 0.00 0.00 32.90 3.18
69 70 3.134879 AGGCGACTCAAACGGACA 58.865 55.556 0.00 0.00 32.90 4.02
98 99 3.791953 TGGGTTATCCGGACAGAAAAA 57.208 42.857 6.12 0.00 38.76 1.94
99 100 3.791953 TTGGGTTATCCGGACAGAAAA 57.208 42.857 6.12 0.00 38.76 2.29
100 101 3.791953 TTTGGGTTATCCGGACAGAAA 57.208 42.857 6.12 0.00 38.76 2.52
101 102 3.616219 CATTTGGGTTATCCGGACAGAA 58.384 45.455 6.12 0.00 38.76 3.02
102 103 2.092646 CCATTTGGGTTATCCGGACAGA 60.093 50.000 6.12 0.00 38.76 3.41
103 104 2.092646 TCCATTTGGGTTATCCGGACAG 60.093 50.000 6.12 0.00 38.76 3.51
104 105 1.916874 TCCATTTGGGTTATCCGGACA 59.083 47.619 6.12 0.00 38.76 4.02
105 106 2.721425 TCCATTTGGGTTATCCGGAC 57.279 50.000 6.12 0.00 38.76 4.79
106 107 5.390087 TTTATCCATTTGGGTTATCCGGA 57.610 39.130 6.61 6.61 38.76 5.14
107 108 6.454795 CATTTTATCCATTTGGGTTATCCGG 58.545 40.000 0.00 0.00 38.76 5.14
108 109 6.454795 CCATTTTATCCATTTGGGTTATCCG 58.545 40.000 0.00 0.00 38.76 4.18
109 110 6.768483 CCCATTTTATCCATTTGGGTTATCC 58.232 40.000 0.00 0.00 41.78 2.59
116 117 3.384467 AGCGACCCATTTTATCCATTTGG 59.616 43.478 0.00 0.00 0.00 3.28
117 118 4.339247 AGAGCGACCCATTTTATCCATTTG 59.661 41.667 0.00 0.00 0.00 2.32
118 119 4.536765 AGAGCGACCCATTTTATCCATTT 58.463 39.130 0.00 0.00 0.00 2.32
119 120 4.170468 AGAGCGACCCATTTTATCCATT 57.830 40.909 0.00 0.00 0.00 3.16
120 121 3.864789 AGAGCGACCCATTTTATCCAT 57.135 42.857 0.00 0.00 0.00 3.41
121 122 4.974645 ATAGAGCGACCCATTTTATCCA 57.025 40.909 0.00 0.00 0.00 3.41
122 123 5.305585 TCAATAGAGCGACCCATTTTATCC 58.694 41.667 0.00 0.00 0.00 2.59
123 124 6.483640 ACTTCAATAGAGCGACCCATTTTATC 59.516 38.462 0.00 0.00 0.00 1.75
124 125 6.357367 ACTTCAATAGAGCGACCCATTTTAT 58.643 36.000 0.00 0.00 0.00 1.40
125 126 5.741011 ACTTCAATAGAGCGACCCATTTTA 58.259 37.500 0.00 0.00 0.00 1.52
126 127 4.589908 ACTTCAATAGAGCGACCCATTTT 58.410 39.130 0.00 0.00 0.00 1.82
127 128 4.222124 ACTTCAATAGAGCGACCCATTT 57.778 40.909 0.00 0.00 0.00 2.32
128 129 3.914426 ACTTCAATAGAGCGACCCATT 57.086 42.857 0.00 0.00 0.00 3.16
129 130 3.535561 CAACTTCAATAGAGCGACCCAT 58.464 45.455 0.00 0.00 0.00 4.00
130 131 2.935238 GCAACTTCAATAGAGCGACCCA 60.935 50.000 0.00 0.00 0.00 4.51
131 132 1.666189 GCAACTTCAATAGAGCGACCC 59.334 52.381 0.00 0.00 0.00 4.46
132 133 2.605366 GAGCAACTTCAATAGAGCGACC 59.395 50.000 0.00 0.00 34.93 4.79
133 134 3.516615 AGAGCAACTTCAATAGAGCGAC 58.483 45.455 0.00 0.00 34.93 5.19
134 135 3.876274 AGAGCAACTTCAATAGAGCGA 57.124 42.857 0.00 0.00 34.93 4.93
135 136 5.105752 ACTTAGAGCAACTTCAATAGAGCG 58.894 41.667 0.00 0.00 34.93 5.03
136 137 7.262048 ACTACTTAGAGCAACTTCAATAGAGC 58.738 38.462 0.00 0.00 0.00 4.09
137 138 9.296400 GAACTACTTAGAGCAACTTCAATAGAG 57.704 37.037 0.00 0.00 0.00 2.43
138 139 8.803235 TGAACTACTTAGAGCAACTTCAATAGA 58.197 33.333 0.00 0.00 0.00 1.98
139 140 8.988064 TGAACTACTTAGAGCAACTTCAATAG 57.012 34.615 0.00 0.00 0.00 1.73
140 141 9.944376 ATTGAACTACTTAGAGCAACTTCAATA 57.056 29.630 0.00 0.00 34.76 1.90
141 142 8.725148 CATTGAACTACTTAGAGCAACTTCAAT 58.275 33.333 0.00 0.00 36.29 2.57
142 143 7.173218 CCATTGAACTACTTAGAGCAACTTCAA 59.827 37.037 0.00 0.00 0.00 2.69
143 144 6.650807 CCATTGAACTACTTAGAGCAACTTCA 59.349 38.462 0.00 0.00 0.00 3.02
144 145 6.402658 GCCATTGAACTACTTAGAGCAACTTC 60.403 42.308 0.00 0.00 0.00 3.01
145 146 5.412904 GCCATTGAACTACTTAGAGCAACTT 59.587 40.000 0.00 0.00 0.00 2.66
146 147 4.938226 GCCATTGAACTACTTAGAGCAACT 59.062 41.667 0.00 0.00 0.00 3.16
147 148 4.095036 GGCCATTGAACTACTTAGAGCAAC 59.905 45.833 0.00 0.00 0.00 4.17
148 149 4.261801 GGCCATTGAACTACTTAGAGCAA 58.738 43.478 0.00 0.00 0.00 3.91
149 150 3.263170 TGGCCATTGAACTACTTAGAGCA 59.737 43.478 0.00 0.00 0.00 4.26
150 151 3.623510 GTGGCCATTGAACTACTTAGAGC 59.376 47.826 9.72 0.00 0.00 4.09
151 152 3.865745 CGTGGCCATTGAACTACTTAGAG 59.134 47.826 9.72 0.00 0.00 2.43
152 153 3.512329 TCGTGGCCATTGAACTACTTAGA 59.488 43.478 9.72 0.00 0.00 2.10
153 154 3.857052 TCGTGGCCATTGAACTACTTAG 58.143 45.455 9.72 0.00 0.00 2.18
154 155 3.857052 CTCGTGGCCATTGAACTACTTA 58.143 45.455 9.72 0.00 0.00 2.24
155 156 2.699954 CTCGTGGCCATTGAACTACTT 58.300 47.619 9.72 0.00 0.00 2.24
156 157 1.676014 GCTCGTGGCCATTGAACTACT 60.676 52.381 9.72 0.00 34.27 2.57
157 158 0.727398 GCTCGTGGCCATTGAACTAC 59.273 55.000 9.72 0.00 34.27 2.73
158 159 3.153024 GCTCGTGGCCATTGAACTA 57.847 52.632 9.72 0.00 34.27 2.24
159 160 3.987404 GCTCGTGGCCATTGAACT 58.013 55.556 9.72 0.00 34.27 3.01
174 175 4.326227 TAGGTGGGGTCGTGGGCT 62.326 66.667 0.00 0.00 0.00 5.19
175 176 3.782443 CTAGGTGGGGTCGTGGGC 61.782 72.222 0.00 0.00 0.00 5.36
176 177 3.782443 GCTAGGTGGGGTCGTGGG 61.782 72.222 0.00 0.00 0.00 4.61
177 178 2.683933 AGCTAGGTGGGGTCGTGG 60.684 66.667 0.00 0.00 0.00 4.94
178 179 2.579201 CAGCTAGGTGGGGTCGTG 59.421 66.667 14.29 0.00 0.00 4.35
179 180 2.683933 CCAGCTAGGTGGGGTCGT 60.684 66.667 29.80 0.00 33.46 4.34
180 181 4.162690 GCCAGCTAGGTGGGGTCG 62.163 72.222 35.57 15.41 40.61 4.79
181 182 2.301738 AAGCCAGCTAGGTGGGGTC 61.302 63.158 35.57 22.26 40.61 4.46
182 183 2.204151 AAGCCAGCTAGGTGGGGT 60.204 61.111 35.57 21.81 40.61 4.95
183 184 2.273449 CAAGCCAGCTAGGTGGGG 59.727 66.667 35.57 17.18 40.61 4.96
184 185 1.377725 CACAAGCCAGCTAGGTGGG 60.378 63.158 35.57 23.94 40.61 4.61
185 186 0.957395 CACACAAGCCAGCTAGGTGG 60.957 60.000 32.36 32.36 40.61 4.61
186 187 0.957395 CCACACAAGCCAGCTAGGTG 60.957 60.000 15.13 15.13 40.61 4.00
187 188 1.376466 CCACACAAGCCAGCTAGGT 59.624 57.895 0.00 0.00 40.61 3.08
188 189 0.613260 TACCACACAAGCCAGCTAGG 59.387 55.000 0.00 0.00 41.84 3.02
189 190 2.698855 ATACCACACAAGCCAGCTAG 57.301 50.000 0.00 0.00 0.00 3.42
190 191 2.835156 TGTATACCACACAAGCCAGCTA 59.165 45.455 0.00 0.00 30.04 3.32
191 192 1.628340 TGTATACCACACAAGCCAGCT 59.372 47.619 0.00 0.00 30.04 4.24
192 193 2.107950 TGTATACCACACAAGCCAGC 57.892 50.000 0.00 0.00 30.04 4.85
193 194 3.623060 GTCATGTATACCACACAAGCCAG 59.377 47.826 0.00 0.00 40.86 4.85
194 195 3.605634 GTCATGTATACCACACAAGCCA 58.394 45.455 0.00 0.00 40.86 4.75
195 196 2.943033 GGTCATGTATACCACACAAGCC 59.057 50.000 0.00 0.00 40.86 4.35
196 197 3.605634 TGGTCATGTATACCACACAAGC 58.394 45.455 0.69 0.00 42.10 4.01
197 198 3.623060 GCTGGTCATGTATACCACACAAG 59.377 47.826 0.69 0.00 42.10 3.16
198 199 3.008485 TGCTGGTCATGTATACCACACAA 59.992 43.478 0.69 0.00 42.10 3.33
199 200 2.569404 TGCTGGTCATGTATACCACACA 59.431 45.455 0.69 0.87 42.10 3.72
200 201 3.118775 TCTGCTGGTCATGTATACCACAC 60.119 47.826 0.69 0.00 42.10 3.82
201 202 3.103742 TCTGCTGGTCATGTATACCACA 58.896 45.455 0.69 4.55 42.10 4.17
202 203 3.118775 TGTCTGCTGGTCATGTATACCAC 60.119 47.826 0.69 0.64 42.10 4.16
203 204 3.103742 TGTCTGCTGGTCATGTATACCA 58.896 45.455 4.79 4.79 44.75 3.25
204 205 3.819564 TGTCTGCTGGTCATGTATACC 57.180 47.619 0.00 0.00 37.53 2.73
205 206 3.871594 GGTTGTCTGCTGGTCATGTATAC 59.128 47.826 0.00 0.00 0.00 1.47
206 207 3.774766 AGGTTGTCTGCTGGTCATGTATA 59.225 43.478 0.00 0.00 0.00 1.47
207 208 2.573462 AGGTTGTCTGCTGGTCATGTAT 59.427 45.455 0.00 0.00 0.00 2.29
208 209 1.977854 AGGTTGTCTGCTGGTCATGTA 59.022 47.619 0.00 0.00 0.00 2.29
209 210 0.767375 AGGTTGTCTGCTGGTCATGT 59.233 50.000 0.00 0.00 0.00 3.21
210 211 1.446907 GAGGTTGTCTGCTGGTCATG 58.553 55.000 0.00 0.00 0.00 3.07
211 212 0.036952 CGAGGTTGTCTGCTGGTCAT 60.037 55.000 0.00 0.00 0.00 3.06
212 213 1.367471 CGAGGTTGTCTGCTGGTCA 59.633 57.895 0.00 0.00 0.00 4.02
213 214 0.601558 TACGAGGTTGTCTGCTGGTC 59.398 55.000 0.00 0.00 0.00 4.02
214 215 1.066858 CATACGAGGTTGTCTGCTGGT 60.067 52.381 0.00 0.00 0.00 4.00
215 216 1.645034 CATACGAGGTTGTCTGCTGG 58.355 55.000 0.00 0.00 0.00 4.85
216 217 1.002366 GCATACGAGGTTGTCTGCTG 58.998 55.000 0.00 0.00 38.50 4.41
217 218 0.608130 TGCATACGAGGTTGTCTGCT 59.392 50.000 8.66 0.00 41.14 4.24
218 219 1.002366 CTGCATACGAGGTTGTCTGC 58.998 55.000 0.00 1.63 40.99 4.26
219 220 2.370281 ACTGCATACGAGGTTGTCTG 57.630 50.000 0.00 0.00 0.00 3.51
220 221 2.299013 TGAACTGCATACGAGGTTGTCT 59.701 45.455 0.00 0.00 0.00 3.41
221 222 2.412089 GTGAACTGCATACGAGGTTGTC 59.588 50.000 0.00 0.00 0.00 3.18
222 223 2.413837 GTGAACTGCATACGAGGTTGT 58.586 47.619 0.00 0.00 0.00 3.32
223 224 1.732259 GGTGAACTGCATACGAGGTTG 59.268 52.381 0.00 0.00 0.00 3.77
224 225 1.346395 TGGTGAACTGCATACGAGGTT 59.654 47.619 0.00 0.00 0.00 3.50
225 226 0.973632 TGGTGAACTGCATACGAGGT 59.026 50.000 0.00 0.00 0.00 3.85
226 227 1.204704 TCTGGTGAACTGCATACGAGG 59.795 52.381 0.00 0.00 0.00 4.63
227 228 2.094494 AGTCTGGTGAACTGCATACGAG 60.094 50.000 0.00 0.00 0.00 4.18
228 229 1.893137 AGTCTGGTGAACTGCATACGA 59.107 47.619 0.00 0.00 0.00 3.43
229 230 2.370281 AGTCTGGTGAACTGCATACG 57.630 50.000 0.00 0.00 0.00 3.06
230 231 4.994852 TGTTAAGTCTGGTGAACTGCATAC 59.005 41.667 0.00 0.00 0.00 2.39
231 232 5.222079 TGTTAAGTCTGGTGAACTGCATA 57.778 39.130 0.00 0.00 0.00 3.14
232 233 4.085357 TGTTAAGTCTGGTGAACTGCAT 57.915 40.909 0.00 0.00 0.00 3.96
233 234 3.552132 TGTTAAGTCTGGTGAACTGCA 57.448 42.857 0.00 0.00 0.00 4.41
234 235 4.893424 TTTGTTAAGTCTGGTGAACTGC 57.107 40.909 0.00 0.00 0.00 4.40
235 236 6.538742 TCTCTTTTGTTAAGTCTGGTGAACTG 59.461 38.462 0.00 0.00 0.00 3.16
236 237 6.650120 TCTCTTTTGTTAAGTCTGGTGAACT 58.350 36.000 0.00 0.00 0.00 3.01
237 238 6.920569 TCTCTTTTGTTAAGTCTGGTGAAC 57.079 37.500 0.00 0.00 0.00 3.18
238 239 7.279615 TCATCTCTTTTGTTAAGTCTGGTGAA 58.720 34.615 0.00 0.00 0.00 3.18
239 240 6.826668 TCATCTCTTTTGTTAAGTCTGGTGA 58.173 36.000 0.00 0.00 0.00 4.02
240 241 6.931281 TCTCATCTCTTTTGTTAAGTCTGGTG 59.069 38.462 0.00 0.00 0.00 4.17
241 242 7.067496 TCTCATCTCTTTTGTTAAGTCTGGT 57.933 36.000 0.00 0.00 0.00 4.00
242 243 6.593382 CCTCTCATCTCTTTTGTTAAGTCTGG 59.407 42.308 0.00 0.00 0.00 3.86
243 244 7.158021 ACCTCTCATCTCTTTTGTTAAGTCTG 58.842 38.462 0.00 0.00 0.00 3.51
244 245 7.309770 ACCTCTCATCTCTTTTGTTAAGTCT 57.690 36.000 0.00 0.00 0.00 3.24
245 246 9.490379 TTTACCTCTCATCTCTTTTGTTAAGTC 57.510 33.333 0.00 0.00 0.00 3.01
246 247 9.847224 TTTTACCTCTCATCTCTTTTGTTAAGT 57.153 29.630 0.00 0.00 0.00 2.24
250 251 9.136323 ACATTTTTACCTCTCATCTCTTTTGTT 57.864 29.630 0.00 0.00 0.00 2.83
251 252 8.697507 ACATTTTTACCTCTCATCTCTTTTGT 57.302 30.769 0.00 0.00 0.00 2.83
252 253 8.786898 TGACATTTTTACCTCTCATCTCTTTTG 58.213 33.333 0.00 0.00 0.00 2.44
253 254 8.924511 TGACATTTTTACCTCTCATCTCTTTT 57.075 30.769 0.00 0.00 0.00 2.27
254 255 8.954350 CATGACATTTTTACCTCTCATCTCTTT 58.046 33.333 0.00 0.00 0.00 2.52
255 256 8.105829 ACATGACATTTTTACCTCTCATCTCTT 58.894 33.333 0.00 0.00 0.00 2.85
256 257 7.551974 CACATGACATTTTTACCTCTCATCTCT 59.448 37.037 0.00 0.00 0.00 3.10
257 258 7.201679 CCACATGACATTTTTACCTCTCATCTC 60.202 40.741 0.00 0.00 0.00 2.75
258 259 6.600822 CCACATGACATTTTTACCTCTCATCT 59.399 38.462 0.00 0.00 0.00 2.90
259 260 6.375455 ACCACATGACATTTTTACCTCTCATC 59.625 38.462 0.00 0.00 0.00 2.92
260 261 6.248433 ACCACATGACATTTTTACCTCTCAT 58.752 36.000 0.00 0.00 0.00 2.90
261 262 5.630121 ACCACATGACATTTTTACCTCTCA 58.370 37.500 0.00 0.00 0.00 3.27
262 263 5.123979 GGACCACATGACATTTTTACCTCTC 59.876 44.000 0.00 0.00 0.00 3.20
263 264 5.010282 GGACCACATGACATTTTTACCTCT 58.990 41.667 0.00 0.00 0.00 3.69
264 265 4.764823 TGGACCACATGACATTTTTACCTC 59.235 41.667 0.00 0.00 0.00 3.85
265 266 4.735369 TGGACCACATGACATTTTTACCT 58.265 39.130 0.00 0.00 0.00 3.08
266 267 5.659440 ATGGACCACATGACATTTTTACC 57.341 39.130 0.00 0.00 38.70 2.85
289 290 8.104431 TGAATTTTCACCAGCTAGCGATTAGC 62.104 42.308 9.55 10.39 42.61 3.09
290 291 5.294306 TGAATTTTCACCAGCTAGCGATTAG 59.706 40.000 9.55 0.00 31.01 1.73
291 292 5.182487 TGAATTTTCACCAGCTAGCGATTA 58.818 37.500 9.55 0.00 31.01 1.75
292 293 4.009675 TGAATTTTCACCAGCTAGCGATT 58.990 39.130 9.55 1.35 31.01 3.34
293 294 3.609853 TGAATTTTCACCAGCTAGCGAT 58.390 40.909 9.55 0.00 31.01 4.58
294 295 3.052455 TGAATTTTCACCAGCTAGCGA 57.948 42.857 9.55 0.00 31.01 4.93
295 296 4.361451 AATGAATTTTCACCAGCTAGCG 57.639 40.909 9.55 4.28 40.49 4.26
296 297 5.713025 TGAAATGAATTTTCACCAGCTAGC 58.287 37.500 6.62 6.62 46.80 3.42
297 298 5.803967 GCTGAAATGAATTTTCACCAGCTAG 59.196 40.000 22.90 9.77 46.80 3.42
298 299 5.243507 TGCTGAAATGAATTTTCACCAGCTA 59.756 36.000 26.39 17.90 46.80 3.32
299 300 4.039488 TGCTGAAATGAATTTTCACCAGCT 59.961 37.500 26.39 0.00 46.80 4.24
300 301 4.309099 TGCTGAAATGAATTTTCACCAGC 58.691 39.130 23.15 23.15 46.80 4.85
301 302 5.929992 ACATGCTGAAATGAATTTTCACCAG 59.070 36.000 0.00 11.62 46.80 4.00
302 303 5.856156 ACATGCTGAAATGAATTTTCACCA 58.144 33.333 0.00 0.00 46.80 4.17
303 304 7.546667 ACATACATGCTGAAATGAATTTTCACC 59.453 33.333 3.07 0.00 46.80 4.02
304 305 8.377681 CACATACATGCTGAAATGAATTTTCAC 58.622 33.333 3.07 0.00 46.80 3.18
306 307 7.464977 GCCACATACATGCTGAAATGAATTTTC 60.465 37.037 3.07 0.00 43.42 2.29
307 308 6.314400 GCCACATACATGCTGAAATGAATTTT 59.686 34.615 3.07 0.00 0.00 1.82
308 309 5.813672 GCCACATACATGCTGAAATGAATTT 59.186 36.000 3.07 0.00 0.00 1.82
309 310 5.353938 GCCACATACATGCTGAAATGAATT 58.646 37.500 3.07 0.00 0.00 2.17
310 311 4.202182 GGCCACATACATGCTGAAATGAAT 60.202 41.667 0.00 0.00 0.00 2.57
311 312 3.130869 GGCCACATACATGCTGAAATGAA 59.869 43.478 0.00 0.00 0.00 2.57
312 313 2.689471 GGCCACATACATGCTGAAATGA 59.311 45.455 0.00 0.00 0.00 2.57
313 314 2.427812 TGGCCACATACATGCTGAAATG 59.572 45.455 0.00 0.00 0.00 2.32
314 315 2.428171 GTGGCCACATACATGCTGAAAT 59.572 45.455 31.23 0.00 0.00 2.17
315 316 1.818060 GTGGCCACATACATGCTGAAA 59.182 47.619 31.23 0.00 0.00 2.69
316 317 1.271817 TGTGGCCACATACATGCTGAA 60.272 47.619 34.74 7.31 36.21 3.02
317 318 0.327591 TGTGGCCACATACATGCTGA 59.672 50.000 34.74 7.90 36.21 4.26
318 319 0.452987 GTGTGGCCACATACATGCTG 59.547 55.000 39.53 0.00 43.97 4.41
319 320 0.329261 AGTGTGGCCACATACATGCT 59.671 50.000 39.53 27.26 44.39 3.79
320 321 0.452987 CAGTGTGGCCACATACATGC 59.547 55.000 39.53 25.49 44.39 4.06
321 322 1.825090 ACAGTGTGGCCACATACATG 58.175 50.000 39.53 32.39 44.39 3.21
322 323 2.584835 AACAGTGTGGCCACATACAT 57.415 45.000 39.53 23.68 44.39 2.29
323 324 2.370519 ACTAACAGTGTGGCCACATACA 59.629 45.455 39.53 21.72 44.39 2.29
324 325 2.742053 CACTAACAGTGTGGCCACATAC 59.258 50.000 39.53 27.68 44.39 2.39
325 326 2.635427 TCACTAACAGTGTGGCCACATA 59.365 45.455 39.53 26.06 46.03 2.29
326 327 1.419762 TCACTAACAGTGTGGCCACAT 59.580 47.619 39.53 26.36 46.03 3.21
327 328 0.833949 TCACTAACAGTGTGGCCACA 59.166 50.000 34.74 34.74 46.03 4.17
328 329 1.961793 TTCACTAACAGTGTGGCCAC 58.038 50.000 29.67 29.67 46.03 5.01
329 330 2.294074 GTTTCACTAACAGTGTGGCCA 58.706 47.619 0.00 0.00 46.03 5.36
330 331 2.294074 TGTTTCACTAACAGTGTGGCC 58.706 47.619 0.00 0.00 46.03 5.36
331 332 3.127895 TGTTGTTTCACTAACAGTGTGGC 59.872 43.478 0.00 0.00 46.81 5.01
332 333 4.908736 CTGTTGTTTCACTAACAGTGTGG 58.091 43.478 0.00 0.00 46.81 4.17
390 391 6.169557 TGCGACAATATATGGGTCTAAGTT 57.830 37.500 13.10 0.00 0.00 2.66
392 393 6.311445 GTCATGCGACAATATATGGGTCTAAG 59.689 42.308 13.10 3.14 42.13 2.18
441 446 4.996122 TGAAATTCCACAAATTGGTGATGC 59.004 37.500 14.90 0.00 46.97 3.91
445 450 5.759273 ACACATGAAATTCCACAAATTGGTG 59.241 36.000 5.94 5.94 46.97 4.17
456 461 4.851558 GCTTGTAACGACACATGAAATTCC 59.148 41.667 0.00 0.00 34.48 3.01
467 472 5.431420 ACAAATTGATGCTTGTAACGACA 57.569 34.783 0.00 0.00 34.04 4.35
493 498 1.878102 CGTTTCCTGTTCCCACCTGAG 60.878 57.143 0.00 0.00 0.00 3.35
495 500 0.107831 TCGTTTCCTGTTCCCACCTG 59.892 55.000 0.00 0.00 0.00 4.00
496 501 0.396811 CTCGTTTCCTGTTCCCACCT 59.603 55.000 0.00 0.00 0.00 4.00
497 502 0.395312 TCTCGTTTCCTGTTCCCACC 59.605 55.000 0.00 0.00 0.00 4.61
498 503 2.474410 ATCTCGTTTCCTGTTCCCAC 57.526 50.000 0.00 0.00 0.00 4.61
507 512 6.481954 AAGTGACAACAATATCTCGTTTCC 57.518 37.500 0.00 0.00 0.00 3.13
553 558 1.174078 ACGCCCCGAACCGAATTTTT 61.174 50.000 0.00 0.00 0.00 1.94
554 559 1.174078 AACGCCCCGAACCGAATTTT 61.174 50.000 0.00 0.00 0.00 1.82
555 560 1.601477 AACGCCCCGAACCGAATTT 60.601 52.632 0.00 0.00 0.00 1.82
556 561 2.032987 AACGCCCCGAACCGAATT 59.967 55.556 0.00 0.00 0.00 2.17
557 562 2.744709 CAACGCCCCGAACCGAAT 60.745 61.111 0.00 0.00 0.00 3.34
560 565 4.973055 TGACAACGCCCCGAACCG 62.973 66.667 0.00 0.00 0.00 4.44
576 581 1.448540 GAGAGTGGTGGACGCCATG 60.449 63.158 7.97 0.00 41.08 3.66
582 587 2.093106 ACATACTCGAGAGTGGTGGAC 58.907 52.381 21.68 0.00 42.52 4.02
594 599 6.073369 CACACAGTCATCAAAAACATACTCG 58.927 40.000 0.00 0.00 0.00 4.18
641 668 3.689649 ACTCGTGAGCTCAACTTGTTTTT 59.310 39.130 20.19 0.00 0.00 1.94
646 673 2.140065 TGACTCGTGAGCTCAACTTG 57.860 50.000 20.19 11.46 0.00 3.16
648 675 2.159099 TGTTTGACTCGTGAGCTCAACT 60.159 45.455 20.19 0.16 32.43 3.16
660 687 9.736023 ATTCATTAGTTGTTTCTTGTTTGACTC 57.264 29.630 0.00 0.00 0.00 3.36
825 857 5.124776 TGGAAAATGGCAGGTAATTTCTACG 59.875 40.000 0.00 0.00 32.14 3.51
840 872 4.021719 ACTTTGTCAGCTGATGGAAAATGG 60.022 41.667 21.47 9.97 0.00 3.16
843 875 5.376625 AGTACTTTGTCAGCTGATGGAAAA 58.623 37.500 21.47 16.07 0.00 2.29
862 894 6.061231 GCACTGGCCTCATATTTTAAGTAC 57.939 41.667 3.32 0.00 0.00 2.73
878 910 2.743928 CACCGAGAAGGCACTGGC 60.744 66.667 0.00 0.00 46.52 4.85
894 926 5.644977 ATTACTGTGATCTCGTCAACTCA 57.355 39.130 0.00 0.00 38.90 3.41
902 935 3.969899 TGCAGCTATTACTGTGATCTCG 58.030 45.455 0.00 0.00 39.96 4.04
915 948 0.543277 TGGCTACTTGCTGCAGCTAT 59.457 50.000 36.61 24.13 42.66 2.97
1038 1077 3.324099 GAGAAGCTCGTCGTCGCCA 62.324 63.158 0.00 0.00 36.96 5.69
1040 1079 0.586995 GTAGAGAAGCTCGTCGTCGC 60.587 60.000 0.00 0.00 35.36 5.19
1200 1245 1.379977 CAGGCGTGGGAGGTAGAGA 60.380 63.158 0.00 0.00 0.00 3.10
1235 1289 2.134287 TAGACGAGGATGGGCAGCC 61.134 63.158 1.26 1.26 37.08 4.85
1239 1293 0.960286 GGTAGTAGACGAGGATGGGC 59.040 60.000 0.00 0.00 0.00 5.36
1243 1297 1.964552 CCGTGGTAGTAGACGAGGAT 58.035 55.000 0.00 0.00 37.81 3.24
1298 1352 0.893447 GTTGAGGTAGGCGTGGTAGT 59.107 55.000 0.00 0.00 0.00 2.73
1602 1692 4.361971 ACCTCGTCGCTCCCCAGA 62.362 66.667 0.00 0.00 0.00 3.86
2021 2114 6.791303 TCAAACTTTCACTTCAACATACACC 58.209 36.000 0.00 0.00 0.00 4.16
2022 2115 8.856490 AATCAAACTTTCACTTCAACATACAC 57.144 30.769 0.00 0.00 0.00 2.90
2260 2364 5.935206 ACATTATGATACACAACGGAACACA 59.065 36.000 0.00 0.00 0.00 3.72
2521 2701 1.429148 GAAAGCACACTATCCCGGCG 61.429 60.000 0.00 0.00 0.00 6.46
2555 2735 8.853077 TTAATGCTGCTGATACTTGCTATATT 57.147 30.769 0.00 0.00 0.00 1.28
2558 2738 6.016777 GGTTTAATGCTGCTGATACTTGCTAT 60.017 38.462 0.00 0.00 0.00 2.97
2607 2899 2.820197 GGAGAGCCGTTGATTTTTCCTT 59.180 45.455 0.00 0.00 0.00 3.36
2609 2901 1.472878 GGGAGAGCCGTTGATTTTTCC 59.527 52.381 0.00 0.00 33.83 3.13
2684 3333 9.088512 CGAAGCTACAGTTATTATTTCAAGAGT 57.911 33.333 0.00 0.00 0.00 3.24
2686 3335 8.997621 ACGAAGCTACAGTTATTATTTCAAGA 57.002 30.769 0.00 0.00 0.00 3.02
2687 3336 8.050750 CGACGAAGCTACAGTTATTATTTCAAG 58.949 37.037 0.00 0.00 0.00 3.02
2689 3338 6.020121 GCGACGAAGCTACAGTTATTATTTCA 60.020 38.462 0.00 0.00 0.00 2.69
2690 3339 6.345569 GCGACGAAGCTACAGTTATTATTTC 58.654 40.000 0.00 0.00 0.00 2.17
2691 3340 5.233689 GGCGACGAAGCTACAGTTATTATTT 59.766 40.000 0.00 0.00 37.29 1.40
2692 3341 4.743644 GGCGACGAAGCTACAGTTATTATT 59.256 41.667 0.00 0.00 37.29 1.40
2693 3342 4.296690 GGCGACGAAGCTACAGTTATTAT 58.703 43.478 0.00 0.00 37.29 1.28
2694 3343 3.699067 GGCGACGAAGCTACAGTTATTA 58.301 45.455 0.00 0.00 37.29 0.98
2695 3344 2.537401 GGCGACGAAGCTACAGTTATT 58.463 47.619 0.00 0.00 37.29 1.40
2696 3345 2.205307 GGCGACGAAGCTACAGTTAT 57.795 50.000 0.00 0.00 37.29 1.89
2697 3346 3.708195 GGCGACGAAGCTACAGTTA 57.292 52.632 0.00 0.00 37.29 2.24
2698 3347 4.573162 GGCGACGAAGCTACAGTT 57.427 55.556 0.00 0.00 37.29 3.16
2710 3359 1.523095 GAAGCAGTATTCATCGGCGAC 59.477 52.381 13.76 0.00 0.00 5.19
2711 3360 1.852942 GAAGCAGTATTCATCGGCGA 58.147 50.000 13.87 13.87 0.00 5.54
2712 3361 0.504384 CGAAGCAGTATTCATCGGCG 59.496 55.000 0.00 0.00 0.00 6.46
2713 3362 1.523095 GACGAAGCAGTATTCATCGGC 59.477 52.381 0.00 0.00 37.81 5.54
2715 3364 4.849883 AGTAGACGAAGCAGTATTCATCG 58.150 43.478 0.00 0.00 39.30 3.84
2721 3370 9.299963 CGTAGTATATAGTAGACGAAGCAGTAT 57.700 37.037 6.96 0.00 32.20 2.12
2722 3371 7.274468 GCGTAGTATATAGTAGACGAAGCAGTA 59.726 40.741 14.34 0.00 32.46 2.74
2723 3372 6.090628 GCGTAGTATATAGTAGACGAAGCAGT 59.909 42.308 14.34 0.00 32.46 4.40
2734 4682 5.997746 ACCGGACAAAGCGTAGTATATAGTA 59.002 40.000 9.46 0.00 0.00 1.82
2735 4683 4.823989 ACCGGACAAAGCGTAGTATATAGT 59.176 41.667 9.46 0.00 0.00 2.12
2736 4684 5.368256 ACCGGACAAAGCGTAGTATATAG 57.632 43.478 9.46 0.00 0.00 1.31
2737 4685 5.772825 AACCGGACAAAGCGTAGTATATA 57.227 39.130 9.46 0.00 0.00 0.86
2738 4686 4.660789 AACCGGACAAAGCGTAGTATAT 57.339 40.909 9.46 0.00 0.00 0.86
2746 4694 3.930848 AGAGTTATAAACCGGACAAAGCG 59.069 43.478 9.46 0.00 0.00 4.68
2799 4747 4.387026 AACTGGATGAATCACCCTTTGA 57.613 40.909 0.00 0.00 39.11 2.69
2800 4748 5.473066 AAAACTGGATGAATCACCCTTTG 57.527 39.130 0.00 0.00 0.00 2.77
2801 4749 6.351286 GCATAAAACTGGATGAATCACCCTTT 60.351 38.462 0.00 0.00 0.00 3.11
2802 4750 5.127682 GCATAAAACTGGATGAATCACCCTT 59.872 40.000 0.00 0.00 0.00 3.95
2803 4751 4.646492 GCATAAAACTGGATGAATCACCCT 59.354 41.667 0.00 0.00 0.00 4.34
2804 4752 4.402155 TGCATAAAACTGGATGAATCACCC 59.598 41.667 0.00 0.00 0.00 4.61
2805 4753 5.581126 TGCATAAAACTGGATGAATCACC 57.419 39.130 0.00 0.00 0.00 4.02
2806 4754 6.567050 ACATGCATAAAACTGGATGAATCAC 58.433 36.000 11.72 0.00 44.91 3.06
2807 4755 6.458615 CGACATGCATAAAACTGGATGAATCA 60.459 38.462 11.72 0.00 44.91 2.57
2808 4756 5.911280 CGACATGCATAAAACTGGATGAATC 59.089 40.000 11.72 0.73 44.91 2.52
2809 4757 5.221106 CCGACATGCATAAAACTGGATGAAT 60.221 40.000 11.72 0.00 44.91 2.57
2810 4758 4.096231 CCGACATGCATAAAACTGGATGAA 59.904 41.667 11.72 0.00 44.91 2.57
2811 4759 3.627123 CCGACATGCATAAAACTGGATGA 59.373 43.478 11.72 0.00 44.91 2.92
2812 4760 3.627123 TCCGACATGCATAAAACTGGATG 59.373 43.478 0.00 4.32 46.75 3.51
2813 4761 3.879295 CTCCGACATGCATAAAACTGGAT 59.121 43.478 0.00 0.00 0.00 3.41
2814 4762 3.270027 CTCCGACATGCATAAAACTGGA 58.730 45.455 0.00 0.55 0.00 3.86
2815 4763 2.355756 CCTCCGACATGCATAAAACTGG 59.644 50.000 0.00 0.00 0.00 4.00
2816 4764 3.063997 GTCCTCCGACATGCATAAAACTG 59.936 47.826 0.00 0.00 38.99 3.16
2817 4765 3.270877 GTCCTCCGACATGCATAAAACT 58.729 45.455 0.00 0.00 38.99 2.66
2818 4766 2.354821 GGTCCTCCGACATGCATAAAAC 59.645 50.000 0.00 0.00 41.13 2.43
2819 4767 2.026729 TGGTCCTCCGACATGCATAAAA 60.027 45.455 0.00 0.00 41.13 1.52
2820 4768 1.557371 TGGTCCTCCGACATGCATAAA 59.443 47.619 0.00 0.00 41.13 1.40
2821 4769 1.199615 TGGTCCTCCGACATGCATAA 58.800 50.000 0.00 0.00 41.13 1.90
2822 4770 1.199615 TTGGTCCTCCGACATGCATA 58.800 50.000 0.00 0.00 41.13 3.14
2823 4771 0.327924 TTTGGTCCTCCGACATGCAT 59.672 50.000 0.00 0.00 41.13 3.96
2824 4772 0.109532 TTTTGGTCCTCCGACATGCA 59.890 50.000 0.00 0.00 41.13 3.96
2825 4773 0.521735 GTTTTGGTCCTCCGACATGC 59.478 55.000 0.00 0.00 41.13 4.06
2826 4774 1.165270 GGTTTTGGTCCTCCGACATG 58.835 55.000 0.00 0.00 41.13 3.21
2827 4775 0.321298 CGGTTTTGGTCCTCCGACAT 60.321 55.000 8.80 0.00 44.86 3.06
2828 4776 1.070105 CGGTTTTGGTCCTCCGACA 59.930 57.895 8.80 0.00 44.86 4.35
2829 4777 0.947660 GACGGTTTTGGTCCTCCGAC 60.948 60.000 17.29 10.43 44.86 4.79
2830 4778 1.368579 GACGGTTTTGGTCCTCCGA 59.631 57.895 17.29 0.00 44.86 4.55
2831 4779 2.025418 CGACGGTTTTGGTCCTCCG 61.025 63.158 11.61 11.61 46.98 4.63
2832 4780 2.322830 GCGACGGTTTTGGTCCTCC 61.323 63.158 0.00 0.00 0.00 4.30
2833 4781 2.322830 GGCGACGGTTTTGGTCCTC 61.323 63.158 0.00 0.00 0.00 3.71
2834 4782 2.281276 GGCGACGGTTTTGGTCCT 60.281 61.111 0.00 0.00 0.00 3.85
2846 4794 1.586564 CGAGGAGTTGATCGGCGAC 60.587 63.158 13.76 7.17 35.33 5.19
2847 4795 2.798689 CGAGGAGTTGATCGGCGA 59.201 61.111 13.87 13.87 35.33 5.54
2848 4796 2.060004 TAGCGAGGAGTTGATCGGCG 62.060 60.000 0.00 0.00 39.31 6.46
2849 4797 0.315568 ATAGCGAGGAGTTGATCGGC 59.684 55.000 0.00 0.00 39.31 5.54
2850 4798 1.609072 TCATAGCGAGGAGTTGATCGG 59.391 52.381 0.00 0.00 39.31 4.18
2851 4799 2.292016 ACTCATAGCGAGGAGTTGATCG 59.708 50.000 8.40 0.00 44.14 3.69
2852 4800 3.637432 CACTCATAGCGAGGAGTTGATC 58.363 50.000 11.58 0.00 44.14 2.92
2853 4801 2.223923 GCACTCATAGCGAGGAGTTGAT 60.224 50.000 11.58 0.00 44.14 2.57
2854 4802 1.135139 GCACTCATAGCGAGGAGTTGA 59.865 52.381 11.58 0.00 44.14 3.18
2855 4803 1.135915 AGCACTCATAGCGAGGAGTTG 59.864 52.381 11.58 8.64 44.14 3.16
2856 4804 1.135915 CAGCACTCATAGCGAGGAGTT 59.864 52.381 11.58 0.00 44.14 3.01
2858 4806 0.031857 CCAGCACTCATAGCGAGGAG 59.968 60.000 6.96 6.96 46.98 3.69
2859 4807 0.684479 ACCAGCACTCATAGCGAGGA 60.684 55.000 0.00 0.00 46.98 3.71
2860 4808 0.529337 CACCAGCACTCATAGCGAGG 60.529 60.000 0.00 0.00 46.98 4.63
2862 4810 0.970427 TCCACCAGCACTCATAGCGA 60.970 55.000 0.00 0.00 37.01 4.93
2863 4811 0.529337 CTCCACCAGCACTCATAGCG 60.529 60.000 0.00 0.00 37.01 4.26
2864 4812 3.376218 CTCCACCAGCACTCATAGC 57.624 57.895 0.00 0.00 0.00 2.97
2904 4852 9.349713 ACAGTTTTAGAGATGTATGGTTTTCAA 57.650 29.630 0.00 0.00 0.00 2.69
2905 4853 8.783093 CACAGTTTTAGAGATGTATGGTTTTCA 58.217 33.333 0.00 0.00 0.00 2.69
2906 4854 8.999431 TCACAGTTTTAGAGATGTATGGTTTTC 58.001 33.333 0.00 0.00 0.00 2.29
2907 4855 8.918202 TCACAGTTTTAGAGATGTATGGTTTT 57.082 30.769 0.00 0.00 0.00 2.43
2908 4856 8.918202 TTCACAGTTTTAGAGATGTATGGTTT 57.082 30.769 0.00 0.00 0.00 3.27
2909 4857 8.918202 TTTCACAGTTTTAGAGATGTATGGTT 57.082 30.769 0.00 0.00 0.00 3.67
2910 4858 8.918202 TTTTCACAGTTTTAGAGATGTATGGT 57.082 30.769 0.00 0.00 0.00 3.55
2933 4881 8.522178 TCTGTATTTTGTGTTTGAACGTTTTT 57.478 26.923 0.46 0.00 0.00 1.94
2934 4882 8.522178 TTCTGTATTTTGTGTTTGAACGTTTT 57.478 26.923 0.46 0.00 0.00 2.43
2935 4883 8.024285 TCTTCTGTATTTTGTGTTTGAACGTTT 58.976 29.630 0.46 0.00 0.00 3.60
2936 4884 7.531716 TCTTCTGTATTTTGTGTTTGAACGTT 58.468 30.769 0.00 0.00 0.00 3.99
2937 4885 7.079182 TCTTCTGTATTTTGTGTTTGAACGT 57.921 32.000 0.00 0.00 0.00 3.99
2938 4886 7.962934 TTCTTCTGTATTTTGTGTTTGAACG 57.037 32.000 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.