Multiple sequence alignment - TraesCS2A01G494600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G494600 chr2A 100.000 4060 0 0 1 4060 726412261 726416320 0.000000e+00 7498.0
1 TraesCS2A01G494600 chr2A 93.238 281 15 2 1 280 723508095 723508372 1.050000e-110 411.0
2 TraesCS2A01G494600 chr2A 93.214 280 16 1 1 280 392846819 392847095 3.780000e-110 409.0
3 TraesCS2A01G494600 chr2A 90.419 167 16 0 2207 2373 726414308 726414474 1.900000e-53 220.0
4 TraesCS2A01G494600 chr2A 90.419 167 16 0 2048 2214 726414467 726414633 1.900000e-53 220.0
5 TraesCS2A01G494600 chr2A 87.931 58 3 4 3317 3372 719476785 719476840 9.420000e-07 65.8
6 TraesCS2A01G494600 chr2A 84.375 64 7 3 3312 3372 1322389 1322452 4.380000e-05 60.2
7 TraesCS2A01G494600 chr2B 90.142 1836 108 29 376 2187 717467140 717468926 0.000000e+00 2320.0
8 TraesCS2A01G494600 chr2B 93.360 1235 69 2 1909 3143 717469464 717470685 0.000000e+00 1814.0
9 TraesCS2A01G494600 chr2B 88.138 725 35 17 3378 4060 717470733 717471448 0.000000e+00 815.0
10 TraesCS2A01G494600 chr2B 87.037 162 21 0 2207 2368 717469603 717469764 2.490000e-42 183.0
11 TraesCS2A01G494600 chr2B 100.000 45 0 0 3290 3334 717470687 717470731 2.600000e-12 84.2
12 TraesCS2A01G494600 chr2D 93.066 1399 76 6 1912 3303 591948395 591949779 0.000000e+00 2026.0
13 TraesCS2A01G494600 chr2D 93.864 440 18 5 281 720 591945945 591946375 0.000000e+00 654.0
14 TraesCS2A01G494600 chr2D 89.319 543 20 12 711 1238 591946781 591947300 0.000000e+00 647.0
15 TraesCS2A01G494600 chr2D 92.059 340 20 3 3426 3765 591950033 591950365 4.750000e-129 472.0
16 TraesCS2A01G494600 chr2D 96.447 197 6 1 1315 1510 591947655 591947851 1.410000e-84 324.0
17 TraesCS2A01G494600 chr2D 89.326 178 19 0 2010 2187 591947849 591948026 1.470000e-54 224.0
18 TraesCS2A01G494600 chr2D 95.683 139 3 3 3924 4060 591952242 591952379 1.900000e-53 220.0
19 TraesCS2A01G494600 chr2D 91.195 159 14 0 1911 2069 591948035 591948193 2.460000e-52 217.0
20 TraesCS2A01G494600 chr2D 88.344 163 19 0 2207 2369 591948531 591948693 3.200000e-46 196.0
21 TraesCS2A01G494600 chr2D 95.918 98 4 0 3799 3896 591951944 591952041 4.200000e-35 159.0
22 TraesCS2A01G494600 chr2D 95.833 48 2 0 3378 3425 591949860 591949907 1.210000e-10 78.7
23 TraesCS2A01G494600 chr1B 86.926 719 48 15 3378 4060 628795128 628795836 0.000000e+00 765.0
24 TraesCS2A01G494600 chr1B 96.491 57 2 0 3247 3303 628794991 628795047 1.200000e-15 95.3
25 TraesCS2A01G494600 chr1B 95.833 48 2 0 3287 3334 628795079 628795126 1.210000e-10 78.7
26 TraesCS2A01G494600 chr6A 94.286 280 15 1 1 280 445706107 445705829 1.040000e-115 427.0
27 TraesCS2A01G494600 chr1A 93.950 281 14 1 1 281 80414561 80414284 4.850000e-114 422.0
28 TraesCS2A01G494600 chr5A 92.958 284 16 2 1 284 296460727 296461006 1.050000e-110 411.0
29 TraesCS2A01G494600 chr5A 93.214 280 17 1 1 280 513838374 513838651 1.050000e-110 411.0
30 TraesCS2A01G494600 chr3A 93.214 280 17 2 1 280 249838754 249838477 1.050000e-110 411.0
31 TraesCS2A01G494600 chr7A 92.908 282 18 1 1 282 486772688 486772409 3.780000e-110 409.0
32 TraesCS2A01G494600 chr1D 90.820 305 19 7 1 301 302864606 302864905 2.270000e-107 399.0
33 TraesCS2A01G494600 chr1D 90.196 51 3 2 3324 3372 245982602 245982652 9.420000e-07 65.8
34 TraesCS2A01G494600 chr1D 84.615 65 7 3 3320 3383 31233040 31232978 1.220000e-05 62.1
35 TraesCS2A01G494600 chr7B 95.349 43 2 0 3338 3380 112023265 112023223 7.280000e-08 69.4
36 TraesCS2A01G494600 chr5B 90.196 51 4 1 3323 3372 432174796 432174746 9.420000e-07 65.8
37 TraesCS2A01G494600 chr4D 93.333 45 1 1 3338 3382 425242800 425242758 9.420000e-07 65.8
38 TraesCS2A01G494600 chr4A 100.000 35 0 0 3338 3372 285490095 285490061 9.420000e-07 65.8
39 TraesCS2A01G494600 chr3D 88.889 54 4 2 3321 3372 310476111 310476058 9.420000e-07 65.8
40 TraesCS2A01G494600 chr3B 85.714 49 7 0 1663 1711 61100107 61100059 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G494600 chr2A 726412261 726416320 4059 False 2646.000000 7498 93.612667 1 4060 3 chr2A.!!$F5 4059
1 TraesCS2A01G494600 chr2B 717467140 717471448 4308 False 1043.240000 2320 91.735400 376 4060 5 chr2B.!!$F1 3684
2 TraesCS2A01G494600 chr2D 591945945 591952379 6434 False 474.336364 2026 92.823091 281 4060 11 chr2D.!!$F1 3779
3 TraesCS2A01G494600 chr1B 628794991 628795836 845 False 313.000000 765 93.083333 3247 4060 3 chr1B.!!$F1 813

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
151 152 0.038892 ACGACTACATCAACCGCGTT 60.039 50.0 4.92 0.00 0.0 4.84 F
397 398 0.039978 CCCGTTCTGGAGATCGATCG 60.040 60.0 19.33 9.36 42.0 3.69 F
1619 2350 0.382515 CCGAGAAGGAGATGGTCGAC 59.617 60.0 7.13 7.13 45.0 4.20 F
1928 2659 0.392193 AGCTGCTCAACCGGAATCTG 60.392 55.0 9.46 0.00 0.0 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1833 2564 0.107945 GATTCAAGGTGCTCGGCTCT 60.108 55.0 0.00 0.0 0.00 4.09 R
1959 2690 0.324738 TCCTCCTGCACTCCTACCAG 60.325 60.0 0.00 0.0 0.00 4.00 R
2570 4117 0.039617 TTGCAACCGCTTTTGGATCG 60.040 50.0 0.00 0.0 39.64 3.69 R
3091 4638 0.111639 AAGAAAGGCGGCAAACCCTA 59.888 50.0 13.08 0.0 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.528041 GTGTTGACGAAACTCTCCCT 57.472 50.000 0.00 0.00 39.70 4.20
26 27 2.405172 GTGTTGACGAAACTCTCCCTC 58.595 52.381 0.00 0.00 39.70 4.30
27 28 1.000607 TGTTGACGAAACTCTCCCTCG 60.001 52.381 0.00 0.00 39.70 4.63
28 29 1.268899 GTTGACGAAACTCTCCCTCGA 59.731 52.381 0.00 0.00 35.75 4.04
29 30 1.612676 TGACGAAACTCTCCCTCGAA 58.387 50.000 0.00 0.00 36.45 3.71
30 31 1.540267 TGACGAAACTCTCCCTCGAAG 59.460 52.381 0.00 0.00 36.45 3.79
31 32 0.244178 ACGAAACTCTCCCTCGAAGC 59.756 55.000 0.00 0.00 36.45 3.86
32 33 0.528470 CGAAACTCTCCCTCGAAGCT 59.472 55.000 0.00 0.00 34.52 3.74
33 34 1.468395 CGAAACTCTCCCTCGAAGCTC 60.468 57.143 0.00 0.00 34.52 4.09
34 35 1.822371 GAAACTCTCCCTCGAAGCTCT 59.178 52.381 0.00 0.00 0.00 4.09
35 36 2.810870 AACTCTCCCTCGAAGCTCTA 57.189 50.000 0.00 0.00 0.00 2.43
36 37 2.047002 ACTCTCCCTCGAAGCTCTAC 57.953 55.000 0.00 0.00 0.00 2.59
37 38 1.562475 ACTCTCCCTCGAAGCTCTACT 59.438 52.381 0.00 0.00 0.00 2.57
38 39 1.946768 CTCTCCCTCGAAGCTCTACTG 59.053 57.143 0.00 0.00 0.00 2.74
39 40 1.028905 CTCCCTCGAAGCTCTACTGG 58.971 60.000 0.00 0.00 0.00 4.00
40 41 0.624254 TCCCTCGAAGCTCTACTGGA 59.376 55.000 0.00 0.00 0.00 3.86
41 42 1.215673 TCCCTCGAAGCTCTACTGGAT 59.784 52.381 0.00 0.00 0.00 3.41
42 43 1.611491 CCCTCGAAGCTCTACTGGATC 59.389 57.143 0.00 0.00 0.00 3.36
43 44 1.265635 CCTCGAAGCTCTACTGGATCG 59.734 57.143 0.00 0.00 0.00 3.69
44 45 1.944024 CTCGAAGCTCTACTGGATCGT 59.056 52.381 0.00 0.00 0.00 3.73
45 46 1.671328 TCGAAGCTCTACTGGATCGTG 59.329 52.381 0.00 0.00 0.00 4.35
46 47 1.671328 CGAAGCTCTACTGGATCGTGA 59.329 52.381 0.00 0.00 0.00 4.35
47 48 2.286713 CGAAGCTCTACTGGATCGTGAG 60.287 54.545 0.00 0.00 0.00 3.51
48 49 2.428544 AGCTCTACTGGATCGTGAGT 57.571 50.000 0.00 0.00 0.00 3.41
49 50 2.729194 AGCTCTACTGGATCGTGAGTT 58.271 47.619 0.00 0.00 0.00 3.01
50 51 2.685897 AGCTCTACTGGATCGTGAGTTC 59.314 50.000 0.00 0.00 0.00 3.01
51 52 2.539953 GCTCTACTGGATCGTGAGTTCG 60.540 54.545 0.00 0.00 0.00 3.95
52 53 2.678836 CTCTACTGGATCGTGAGTTCGT 59.321 50.000 0.00 0.00 0.00 3.85
53 54 2.418976 TCTACTGGATCGTGAGTTCGTG 59.581 50.000 0.00 0.00 0.00 4.35
54 55 0.243907 ACTGGATCGTGAGTTCGTGG 59.756 55.000 0.00 0.00 0.00 4.94
55 56 0.458543 CTGGATCGTGAGTTCGTGGG 60.459 60.000 0.00 0.00 0.00 4.61
56 57 0.896479 TGGATCGTGAGTTCGTGGGA 60.896 55.000 0.00 0.00 0.00 4.37
57 58 0.458025 GGATCGTGAGTTCGTGGGAC 60.458 60.000 0.00 0.00 0.00 4.46
58 59 0.797249 GATCGTGAGTTCGTGGGACG 60.797 60.000 0.00 0.00 44.19 4.79
59 60 1.521450 ATCGTGAGTTCGTGGGACGT 61.521 55.000 0.00 0.00 43.14 4.34
60 61 1.728426 CGTGAGTTCGTGGGACGTC 60.728 63.158 7.13 7.13 43.14 4.34
61 62 1.361271 GTGAGTTCGTGGGACGTCA 59.639 57.895 18.91 0.00 43.14 4.35
62 63 0.249155 GTGAGTTCGTGGGACGTCAA 60.249 55.000 18.91 1.40 43.14 3.18
63 64 0.249155 TGAGTTCGTGGGACGTCAAC 60.249 55.000 18.91 13.76 43.14 3.18
64 65 1.273455 GAGTTCGTGGGACGTCAACG 61.273 60.000 27.49 27.49 43.14 4.10
65 66 1.299316 GTTCGTGGGACGTCAACGA 60.299 57.895 30.22 30.22 43.14 3.85
66 67 1.008194 TTCGTGGGACGTCAACGAG 60.008 57.895 31.14 16.82 43.14 4.18
67 68 3.103911 CGTGGGACGTCAACGAGC 61.104 66.667 28.75 7.78 43.02 5.03
68 69 2.737376 GTGGGACGTCAACGAGCC 60.737 66.667 18.91 8.62 43.02 4.70
69 70 4.351938 TGGGACGTCAACGAGCCG 62.352 66.667 18.91 0.00 43.02 5.52
70 71 4.047059 GGGACGTCAACGAGCCGA 62.047 66.667 18.91 0.00 43.02 5.54
71 72 2.049802 GGACGTCAACGAGCCGAA 60.050 61.111 18.91 0.00 43.02 4.30
72 73 2.370393 GGACGTCAACGAGCCGAAC 61.370 63.158 18.91 0.00 43.02 3.95
73 74 1.659335 GACGTCAACGAGCCGAACA 60.659 57.895 11.55 0.00 43.02 3.18
74 75 1.006571 ACGTCAACGAGCCGAACAT 60.007 52.632 9.88 0.00 43.02 2.71
75 76 1.282248 ACGTCAACGAGCCGAACATG 61.282 55.000 9.88 0.00 43.02 3.21
76 77 1.282248 CGTCAACGAGCCGAACATGT 61.282 55.000 0.00 0.00 43.02 3.21
77 78 0.163788 GTCAACGAGCCGAACATGTG 59.836 55.000 0.00 0.00 0.00 3.21
78 79 1.154413 CAACGAGCCGAACATGTGC 60.154 57.895 0.00 0.00 0.00 4.57
79 80 1.596752 AACGAGCCGAACATGTGCA 60.597 52.632 4.29 0.00 0.00 4.57
80 81 0.955428 AACGAGCCGAACATGTGCAT 60.955 50.000 4.29 0.00 0.00 3.96
81 82 0.108377 ACGAGCCGAACATGTGCATA 60.108 50.000 4.29 0.00 0.00 3.14
82 83 1.220529 CGAGCCGAACATGTGCATAT 58.779 50.000 4.29 0.00 0.00 1.78
83 84 1.599071 CGAGCCGAACATGTGCATATT 59.401 47.619 4.29 0.00 0.00 1.28
84 85 2.600556 CGAGCCGAACATGTGCATATTG 60.601 50.000 4.29 0.00 0.00 1.90
85 86 1.066002 AGCCGAACATGTGCATATTGC 59.934 47.619 4.29 0.00 45.29 3.56
95 96 1.934463 GCATATTGCGGAGGTGTCG 59.066 57.895 0.00 0.00 31.71 4.35
96 97 0.810031 GCATATTGCGGAGGTGTCGT 60.810 55.000 0.00 0.00 31.71 4.34
97 98 1.537348 GCATATTGCGGAGGTGTCGTA 60.537 52.381 0.00 0.00 31.71 3.43
98 99 2.124903 CATATTGCGGAGGTGTCGTAC 58.875 52.381 0.00 0.00 0.00 3.67
99 100 1.175654 TATTGCGGAGGTGTCGTACA 58.824 50.000 0.00 0.00 0.00 2.90
100 101 0.535335 ATTGCGGAGGTGTCGTACAT 59.465 50.000 0.00 0.00 0.00 2.29
101 102 0.319083 TTGCGGAGGTGTCGTACATT 59.681 50.000 0.00 0.00 0.00 2.71
102 103 0.108992 TGCGGAGGTGTCGTACATTC 60.109 55.000 0.00 0.00 0.00 2.67
103 104 1.138047 GCGGAGGTGTCGTACATTCG 61.138 60.000 4.11 4.11 44.58 3.34
104 105 0.524816 CGGAGGTGTCGTACATTCGG 60.525 60.000 0.00 0.56 38.37 4.30
105 106 0.529378 GGAGGTGTCGTACATTCGGT 59.471 55.000 0.00 0.00 0.00 4.69
106 107 1.625616 GAGGTGTCGTACATTCGGTG 58.374 55.000 0.00 0.00 0.00 4.94
107 108 0.389426 AGGTGTCGTACATTCGGTGC 60.389 55.000 0.00 0.00 0.00 5.01
108 109 0.389426 GGTGTCGTACATTCGGTGCT 60.389 55.000 0.00 0.00 0.00 4.40
109 110 1.135315 GGTGTCGTACATTCGGTGCTA 60.135 52.381 0.00 0.00 0.00 3.49
110 111 2.182825 GTGTCGTACATTCGGTGCTAG 58.817 52.381 0.00 0.00 0.00 3.42
111 112 2.086094 TGTCGTACATTCGGTGCTAGA 58.914 47.619 0.00 0.00 0.00 2.43
112 113 2.686405 TGTCGTACATTCGGTGCTAGAT 59.314 45.455 0.00 0.00 0.00 1.98
113 114 3.129813 TGTCGTACATTCGGTGCTAGATT 59.870 43.478 0.00 0.00 0.00 2.40
114 115 3.486108 GTCGTACATTCGGTGCTAGATTG 59.514 47.826 0.00 0.00 0.00 2.67
115 116 2.794910 CGTACATTCGGTGCTAGATTGG 59.205 50.000 0.00 0.00 0.00 3.16
116 117 3.737047 CGTACATTCGGTGCTAGATTGGT 60.737 47.826 0.00 0.00 0.00 3.67
117 118 2.906354 ACATTCGGTGCTAGATTGGTC 58.094 47.619 0.00 0.00 0.00 4.02
118 119 1.860950 CATTCGGTGCTAGATTGGTCG 59.139 52.381 0.00 0.00 0.00 4.79
119 120 1.179152 TTCGGTGCTAGATTGGTCGA 58.821 50.000 0.00 0.00 0.00 4.20
120 121 1.399714 TCGGTGCTAGATTGGTCGAT 58.600 50.000 0.00 0.00 0.00 3.59
121 122 1.337071 TCGGTGCTAGATTGGTCGATC 59.663 52.381 0.00 0.00 0.00 3.69
122 123 1.772182 GGTGCTAGATTGGTCGATCG 58.228 55.000 9.36 9.36 0.00 3.69
123 124 1.067212 GGTGCTAGATTGGTCGATCGT 59.933 52.381 15.94 0.00 0.00 3.73
124 125 2.120232 GTGCTAGATTGGTCGATCGTG 58.880 52.381 15.94 0.00 0.00 4.35
125 126 2.021457 TGCTAGATTGGTCGATCGTGA 58.979 47.619 15.94 0.00 0.00 4.35
126 127 2.425668 TGCTAGATTGGTCGATCGTGAA 59.574 45.455 15.94 6.83 0.00 3.18
127 128 3.046390 GCTAGATTGGTCGATCGTGAAG 58.954 50.000 15.94 4.18 0.00 3.02
128 129 3.243101 GCTAGATTGGTCGATCGTGAAGA 60.243 47.826 15.94 0.00 0.00 2.87
129 130 3.152261 AGATTGGTCGATCGTGAAGAC 57.848 47.619 15.94 5.12 0.00 3.01
131 132 0.594602 TTGGTCGATCGTGAAGACGT 59.405 50.000 15.94 0.00 46.20 4.34
132 133 1.441738 TGGTCGATCGTGAAGACGTA 58.558 50.000 15.94 0.00 46.20 3.57
133 134 1.129251 TGGTCGATCGTGAAGACGTAC 59.871 52.381 15.94 2.00 46.20 3.67
134 135 1.440790 GTCGATCGTGAAGACGTACG 58.559 55.000 15.01 15.01 46.20 3.67
140 141 2.403259 TCGTGAAGACGTACGACTACA 58.597 47.619 24.41 13.28 46.20 2.74
141 142 2.995939 TCGTGAAGACGTACGACTACAT 59.004 45.455 24.41 6.17 46.20 2.29
142 143 3.061295 TCGTGAAGACGTACGACTACATC 59.939 47.826 24.41 15.62 46.20 3.06
143 144 3.181527 CGTGAAGACGTACGACTACATCA 60.182 47.826 24.41 18.00 42.54 3.07
144 145 4.667415 CGTGAAGACGTACGACTACATCAA 60.667 45.833 24.41 4.49 42.54 2.57
145 146 4.552660 GTGAAGACGTACGACTACATCAAC 59.447 45.833 24.41 11.90 0.00 3.18
146 147 3.754188 AGACGTACGACTACATCAACC 57.246 47.619 24.41 0.00 0.00 3.77
147 148 2.094894 AGACGTACGACTACATCAACCG 59.905 50.000 24.41 0.00 0.00 4.44
148 149 1.186030 CGTACGACTACATCAACCGC 58.814 55.000 10.44 0.00 0.00 5.68
149 150 1.186030 GTACGACTACATCAACCGCG 58.814 55.000 0.00 0.00 0.00 6.46
150 151 0.804364 TACGACTACATCAACCGCGT 59.196 50.000 4.92 0.00 0.00 6.01
151 152 0.038892 ACGACTACATCAACCGCGTT 60.039 50.000 4.92 0.00 0.00 4.84
152 153 0.365523 CGACTACATCAACCGCGTTG 59.634 55.000 4.92 10.14 43.99 4.10
153 154 1.425412 GACTACATCAACCGCGTTGT 58.575 50.000 16.97 9.99 43.23 3.32
154 155 1.389106 GACTACATCAACCGCGTTGTC 59.611 52.381 16.97 5.64 43.23 3.18
155 156 1.269883 ACTACATCAACCGCGTTGTCA 60.270 47.619 16.97 4.13 43.23 3.58
156 157 1.999735 CTACATCAACCGCGTTGTCAT 59.000 47.619 16.97 5.85 43.23 3.06
157 158 2.087501 ACATCAACCGCGTTGTCATA 57.912 45.000 16.97 3.28 43.23 2.15
158 159 2.418692 ACATCAACCGCGTTGTCATAA 58.581 42.857 16.97 2.99 43.23 1.90
159 160 2.158841 ACATCAACCGCGTTGTCATAAC 59.841 45.455 16.97 0.00 43.23 1.89
160 161 0.785378 TCAACCGCGTTGTCATAACG 59.215 50.000 16.97 1.71 43.23 3.18
166 167 3.850207 CGTTGTCATAACGCTTCCG 57.150 52.632 0.00 0.00 36.82 4.30
167 168 0.247145 CGTTGTCATAACGCTTCCGC 60.247 55.000 0.00 0.00 36.82 5.54
168 169 1.076332 GTTGTCATAACGCTTCCGCT 58.924 50.000 0.00 0.00 38.22 5.52
169 170 1.463444 GTTGTCATAACGCTTCCGCTT 59.537 47.619 0.00 0.00 38.22 4.68
170 171 2.658373 TGTCATAACGCTTCCGCTTA 57.342 45.000 0.00 0.00 38.22 3.09
171 172 2.264813 TGTCATAACGCTTCCGCTTAC 58.735 47.619 0.00 0.00 38.22 2.34
172 173 1.254570 GTCATAACGCTTCCGCTTACG 59.745 52.381 0.00 0.00 38.22 3.18
195 196 2.890808 TACGAGGGTACGTAGACGAT 57.109 50.000 9.41 0.00 44.72 3.73
196 197 2.890808 ACGAGGGTACGTAGACGATA 57.109 50.000 9.41 0.00 44.72 2.92
197 198 2.474816 ACGAGGGTACGTAGACGATAC 58.525 52.381 9.41 7.51 44.72 2.24
198 199 2.101582 ACGAGGGTACGTAGACGATACT 59.898 50.000 9.41 1.42 44.72 2.12
199 200 2.728839 CGAGGGTACGTAGACGATACTC 59.271 54.545 9.41 7.65 43.02 2.59
200 201 3.551863 CGAGGGTACGTAGACGATACTCT 60.552 52.174 9.41 11.95 43.02 3.24
201 202 3.987220 GAGGGTACGTAGACGATACTCTC 59.013 52.174 19.37 19.37 41.38 3.20
202 203 3.063485 GGGTACGTAGACGATACTCTCC 58.937 54.545 9.41 2.14 43.02 3.71
203 204 3.063485 GGTACGTAGACGATACTCTCCC 58.937 54.545 9.41 0.00 43.02 4.30
204 205 2.252976 ACGTAGACGATACTCTCCCC 57.747 55.000 9.41 0.00 43.02 4.81
205 206 1.767681 ACGTAGACGATACTCTCCCCT 59.232 52.381 9.41 0.00 43.02 4.79
206 207 2.224257 ACGTAGACGATACTCTCCCCTC 60.224 54.545 9.41 0.00 43.02 4.30
207 208 2.037511 CGTAGACGATACTCTCCCCTCT 59.962 54.545 0.00 0.00 43.02 3.69
208 209 2.943036 AGACGATACTCTCCCCTCTC 57.057 55.000 0.00 0.00 0.00 3.20
209 210 1.071071 AGACGATACTCTCCCCTCTCG 59.929 57.143 0.00 0.00 0.00 4.04
210 211 0.838608 ACGATACTCTCCCCTCTCGT 59.161 55.000 0.00 0.00 34.80 4.18
211 212 1.212441 ACGATACTCTCCCCTCTCGTT 59.788 52.381 0.00 0.00 36.04 3.85
212 213 1.604755 CGATACTCTCCCCTCTCGTTG 59.395 57.143 0.00 0.00 0.00 4.10
213 214 1.338655 GATACTCTCCCCTCTCGTTGC 59.661 57.143 0.00 0.00 0.00 4.17
214 215 0.331954 TACTCTCCCCTCTCGTTGCT 59.668 55.000 0.00 0.00 0.00 3.91
215 216 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
216 217 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
217 218 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
218 219 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
219 220 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
220 221 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
221 222 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
222 223 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
223 224 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
224 225 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
225 226 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
226 227 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
227 228 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
228 229 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
229 230 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
230 231 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
231 232 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
232 233 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
233 234 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
234 235 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
235 236 2.131776 TGCATCACCATGATCTTGCA 57.868 45.000 3.07 8.61 37.51 4.08
236 237 2.661718 TGCATCACCATGATCTTGCAT 58.338 42.857 3.07 0.00 35.67 3.96
237 238 2.360801 TGCATCACCATGATCTTGCATG 59.639 45.455 3.07 0.00 44.05 4.06
238 239 2.361119 GCATCACCATGATCTTGCATGT 59.639 45.455 3.07 0.00 43.16 3.21
239 240 3.795488 GCATCACCATGATCTTGCATGTG 60.795 47.826 3.07 6.61 43.16 3.21
240 241 1.746787 TCACCATGATCTTGCATGTGC 59.253 47.619 3.07 0.00 43.16 4.57
241 242 0.736636 ACCATGATCTTGCATGTGCG 59.263 50.000 3.07 0.00 43.16 5.34
242 243 0.736636 CCATGATCTTGCATGTGCGT 59.263 50.000 3.07 0.00 43.16 5.24
243 244 1.941975 CCATGATCTTGCATGTGCGTA 59.058 47.619 3.07 0.00 43.16 4.42
244 245 2.032290 CCATGATCTTGCATGTGCGTAG 60.032 50.000 3.07 1.03 43.16 3.51
245 246 2.671130 TGATCTTGCATGTGCGTAGA 57.329 45.000 10.65 10.65 45.83 2.59
246 247 2.971307 TGATCTTGCATGTGCGTAGAA 58.029 42.857 11.82 0.00 45.83 2.10
247 248 3.534554 TGATCTTGCATGTGCGTAGAAT 58.465 40.909 11.82 3.93 45.83 2.40
248 249 3.940852 TGATCTTGCATGTGCGTAGAATT 59.059 39.130 11.82 0.26 45.83 2.17
249 250 4.395854 TGATCTTGCATGTGCGTAGAATTT 59.604 37.500 11.82 0.00 45.83 1.82
250 251 4.764679 TCTTGCATGTGCGTAGAATTTT 57.235 36.364 7.04 0.00 45.83 1.82
251 252 5.119931 TCTTGCATGTGCGTAGAATTTTT 57.880 34.783 7.04 0.00 45.83 1.94
252 253 5.153513 TCTTGCATGTGCGTAGAATTTTTC 58.846 37.500 7.04 0.00 45.83 2.29
253 254 4.764679 TGCATGTGCGTAGAATTTTTCT 57.235 36.364 0.01 0.00 45.83 2.52
254 255 5.119931 TGCATGTGCGTAGAATTTTTCTT 57.880 34.783 0.01 0.00 45.83 2.52
255 256 5.527951 TGCATGTGCGTAGAATTTTTCTTT 58.472 33.333 0.01 0.00 45.83 2.52
256 257 5.982516 TGCATGTGCGTAGAATTTTTCTTTT 59.017 32.000 0.01 0.00 45.83 2.27
257 258 6.478344 TGCATGTGCGTAGAATTTTTCTTTTT 59.522 30.769 0.01 0.00 45.83 1.94
258 259 6.787043 GCATGTGCGTAGAATTTTTCTTTTTG 59.213 34.615 0.00 0.00 41.14 2.44
259 260 7.306515 GCATGTGCGTAGAATTTTTCTTTTTGA 60.307 33.333 0.00 0.00 41.14 2.69
260 261 8.538856 CATGTGCGTAGAATTTTTCTTTTTGAA 58.461 29.630 0.00 0.00 41.14 2.69
261 262 8.467402 TGTGCGTAGAATTTTTCTTTTTGAAA 57.533 26.923 0.00 0.00 42.33 2.69
262 263 9.092876 TGTGCGTAGAATTTTTCTTTTTGAAAT 57.907 25.926 0.00 0.00 43.34 2.17
263 264 9.914923 GTGCGTAGAATTTTTCTTTTTGAAATT 57.085 25.926 0.00 0.00 43.34 1.82
270 271 9.914923 GAATTTTTCTTTTTGAAATTACTGCGT 57.085 25.926 0.00 0.00 43.34 5.24
272 273 9.914923 ATTTTTCTTTTTGAAATTACTGCGTTC 57.085 25.926 0.00 0.00 43.34 3.95
273 274 7.458038 TTTCTTTTTGAAATTACTGCGTTCC 57.542 32.000 0.00 0.00 39.50 3.62
274 275 5.525199 TCTTTTTGAAATTACTGCGTTCCC 58.475 37.500 0.00 0.00 0.00 3.97
275 276 3.926821 TTTGAAATTACTGCGTTCCCC 57.073 42.857 0.00 0.00 0.00 4.81
276 277 2.570415 TGAAATTACTGCGTTCCCCA 57.430 45.000 0.00 0.00 0.00 4.96
277 278 2.865079 TGAAATTACTGCGTTCCCCAA 58.135 42.857 0.00 0.00 0.00 4.12
278 279 2.554893 TGAAATTACTGCGTTCCCCAAC 59.445 45.455 0.00 0.00 0.00 3.77
279 280 2.279935 AATTACTGCGTTCCCCAACA 57.720 45.000 0.00 0.00 32.14 3.33
280 281 2.279935 ATTACTGCGTTCCCCAACAA 57.720 45.000 0.00 0.00 32.14 2.83
281 282 1.600023 TTACTGCGTTCCCCAACAAG 58.400 50.000 0.00 0.00 32.14 3.16
282 283 0.470766 TACTGCGTTCCCCAACAAGT 59.529 50.000 0.00 0.00 34.77 3.16
283 284 0.470766 ACTGCGTTCCCCAACAAGTA 59.529 50.000 0.00 0.00 30.69 2.24
284 285 0.872388 CTGCGTTCCCCAACAAGTAC 59.128 55.000 0.00 0.00 32.14 2.73
285 286 0.470766 TGCGTTCCCCAACAAGTACT 59.529 50.000 0.00 0.00 32.14 2.73
286 287 1.693062 TGCGTTCCCCAACAAGTACTA 59.307 47.619 0.00 0.00 32.14 1.82
287 288 2.289195 TGCGTTCCCCAACAAGTACTAG 60.289 50.000 0.00 0.00 32.14 2.57
288 289 2.289257 GCGTTCCCCAACAAGTACTAGT 60.289 50.000 0.00 0.00 32.14 2.57
289 290 3.804759 GCGTTCCCCAACAAGTACTAGTT 60.805 47.826 0.00 0.00 32.14 2.24
290 291 4.561326 GCGTTCCCCAACAAGTACTAGTTA 60.561 45.833 0.00 0.00 32.14 2.24
291 292 4.925646 CGTTCCCCAACAAGTACTAGTTAC 59.074 45.833 0.00 0.00 32.14 2.50
395 396 3.515059 TCCCGTTCTGGAGATCGAT 57.485 52.632 0.00 0.00 42.00 3.59
396 397 1.319541 TCCCGTTCTGGAGATCGATC 58.680 55.000 17.91 17.91 42.00 3.69
397 398 0.039978 CCCGTTCTGGAGATCGATCG 60.040 60.000 19.33 9.36 42.00 3.69
398 399 0.945099 CCGTTCTGGAGATCGATCGA 59.055 55.000 21.86 21.86 42.00 3.59
403 404 1.876799 TCTGGAGATCGATCGAGAAGC 59.123 52.381 23.84 12.21 31.96 3.86
416 417 4.424566 GAAGCGTCGCCGGGTGTA 62.425 66.667 14.86 0.00 33.68 2.90
470 471 4.753233 CACACCTTTTGTCATCCAAACAA 58.247 39.130 0.00 0.00 42.63 2.83
471 472 4.566360 CACACCTTTTGTCATCCAAACAAC 59.434 41.667 0.00 0.00 42.63 3.32
483 484 2.884012 TCCAAACAACGATGTGATGCTT 59.116 40.909 0.00 0.00 40.46 3.91
487 488 5.512788 CCAAACAACGATGTGATGCTTATTC 59.487 40.000 0.00 0.00 40.46 1.75
515 516 2.046314 GCCTTTGCAGTAGCCGGA 60.046 61.111 5.05 0.00 41.13 5.14
612 613 7.073265 GCAAACATCCTTTGATCAACATTTTG 58.927 34.615 7.89 12.16 0.00 2.44
731 1147 6.793492 AGCTCAAACATCTTCTTACTGTTC 57.207 37.500 0.00 0.00 32.18 3.18
748 1170 6.298441 ACTGTTCCATTTATTTTGATGGGG 57.702 37.500 2.82 0.00 42.47 4.96
753 1175 7.093377 TGTTCCATTTATTTTGATGGGGAGAAG 60.093 37.037 2.82 0.00 42.47 2.85
772 1194 7.201688 GGGAGAAGAAGAATCTCAAGCATTAAC 60.202 40.741 5.96 0.00 44.13 2.01
810 1232 6.874134 ACAACCTGACAGAATACAACTACATC 59.126 38.462 3.32 0.00 0.00 3.06
868 1292 3.775661 AAGTGAAGTGAAAACCCAACG 57.224 42.857 0.00 0.00 0.00 4.10
896 1328 1.455383 CGTTGGTTGCCTTGCCTTCT 61.455 55.000 0.00 0.00 0.00 2.85
931 1363 4.740822 CCCCAAACCCCAGCTCGG 62.741 72.222 0.00 0.00 0.00 4.63
969 1401 2.046108 CTTTCCCAAACCCCAACCG 58.954 57.895 0.00 0.00 0.00 4.44
987 1419 2.885644 CACTCCATTCGCCGACCG 60.886 66.667 0.00 0.00 38.61 4.79
994 1426 1.065928 ATTCGCCGACCGATCAGTC 59.934 57.895 0.00 0.00 46.81 3.51
1469 2199 0.738975 TCGAGGCGTACATCCTGAAG 59.261 55.000 8.28 1.37 33.24 3.02
1475 2205 0.384309 CGTACATCCTGAAGCCGCTA 59.616 55.000 0.00 0.00 0.00 4.26
1594 2325 3.157252 GAGCCGCCTCATCTGGGA 61.157 66.667 0.00 0.00 38.03 4.37
1619 2350 0.382515 CCGAGAAGGAGATGGTCGAC 59.617 60.000 7.13 7.13 45.00 4.20
1623 2354 1.006043 AGAAGGAGATGGTCGACCTGA 59.994 52.381 33.39 16.65 36.82 3.86
1658 2389 0.465705 CCGACTGGACATGCCACTAT 59.534 55.000 4.93 0.00 43.33 2.12
1660 2391 1.303309 GACTGGACATGCCACTATGC 58.697 55.000 4.93 0.00 43.33 3.14
1664 2395 2.516930 ACATGCCACTATGCCGCC 60.517 61.111 0.00 0.00 0.00 6.13
1680 2411 4.040645 CCTACCTGCAGAGGCTCA 57.959 61.111 17.39 0.00 44.33 4.26
1691 2422 0.980231 AGAGGCTCATCTGGGTGGAC 60.980 60.000 18.26 0.00 0.00 4.02
1785 2516 0.460987 GTCCAAGATGCAGGAGGTCG 60.461 60.000 0.00 0.00 33.85 4.79
1786 2517 0.614697 TCCAAGATGCAGGAGGTCGA 60.615 55.000 0.00 0.00 0.00 4.20
1808 2539 2.970576 GAGATCCAAGCTGCTCGAC 58.029 57.895 1.00 0.00 0.00 4.20
1809 2540 0.869454 GAGATCCAAGCTGCTCGACG 60.869 60.000 1.00 0.00 0.00 5.12
1810 2541 2.510238 ATCCAAGCTGCTCGACGC 60.510 61.111 1.00 0.58 39.77 5.19
1821 2552 2.102357 TCGACGCGAGATCCAAGC 59.898 61.111 15.93 0.00 0.00 4.01
1822 2553 2.103143 CGACGCGAGATCCAAGCT 59.897 61.111 15.93 0.00 0.00 3.74
1823 2554 2.226896 CGACGCGAGATCCAAGCTG 61.227 63.158 15.93 0.00 0.00 4.24
1824 2555 2.510238 ACGCGAGATCCAAGCTGC 60.510 61.111 15.93 0.00 0.00 5.25
1825 2556 2.202851 CGCGAGATCCAAGCTGCT 60.203 61.111 0.00 0.00 0.00 4.24
1826 2557 2.523507 CGCGAGATCCAAGCTGCTG 61.524 63.158 0.00 0.00 0.00 4.41
1827 2558 2.178890 GCGAGATCCAAGCTGCTGG 61.179 63.158 1.35 7.37 37.87 4.85
1832 2563 2.431683 TCCAAGCTGCTGGACACC 59.568 61.111 5.38 0.00 40.71 4.16
1833 2564 2.113774 CCAAGCTGCTGGACACCA 59.886 61.111 5.38 0.00 38.96 4.17
1859 2590 2.087646 GAGCACCTTGAATCCAAGTCC 58.912 52.381 0.00 0.00 46.37 3.85
1878 2609 1.523758 CAAGGAACTGGAAGAACGGG 58.476 55.000 0.00 0.00 40.86 5.28
1881 2612 1.235281 GGAACTGGAAGAACGGGCAC 61.235 60.000 0.00 0.00 37.43 5.01
1892 2623 4.093952 CGGGCACTCGCAAGCAAG 62.094 66.667 0.00 0.00 41.24 4.01
1894 2625 2.558313 GGCACTCGCAAGCAAGAC 59.442 61.111 0.00 0.00 41.24 3.01
1928 2659 0.392193 AGCTGCTCAACCGGAATCTG 60.392 55.000 9.46 0.00 0.00 2.90
1932 2663 1.424493 GCTCAACCGGAATCTGCTCG 61.424 60.000 9.46 0.00 0.00 5.03
1934 2665 2.125106 AACCGGAATCTGCTCGCC 60.125 61.111 9.46 0.00 0.00 5.54
1945 2676 1.691215 CTGCTCGCCGAGAAAGAAGC 61.691 60.000 20.05 1.21 0.00 3.86
1959 2690 3.911661 AAGAAGCAATCAACAGTGAGC 57.088 42.857 0.00 0.00 37.14 4.26
1964 3511 2.038952 AGCAATCAACAGTGAGCTGGTA 59.961 45.455 0.00 0.00 41.48 3.25
2050 3597 5.545658 TCAATGAAATCGTTGAGTAAGGC 57.454 39.130 12.78 0.00 44.33 4.35
2054 3601 4.245660 TGAAATCGTTGAGTAAGGCTCTG 58.754 43.478 0.00 0.00 44.41 3.35
2059 3606 4.056050 TCGTTGAGTAAGGCTCTGTTTTC 58.944 43.478 0.00 0.00 44.41 2.29
2072 3619 5.182190 GGCTCTGTTTTCTAGGGAAAGAAAG 59.818 44.000 0.00 0.00 44.15 2.62
2078 3625 6.777580 TGTTTTCTAGGGAAAGAAAGAGCAAT 59.222 34.615 0.00 0.00 44.15 3.56
2094 3641 2.187707 GCAATGCTCGGTTGCTAAATG 58.812 47.619 0.00 0.00 46.34 2.32
2127 3674 4.662278 TCTGGTTACCAAGGAAATCAAGG 58.338 43.478 5.31 0.00 30.80 3.61
2188 3735 3.851955 GCAGGATGGGATGCAAGG 58.148 61.111 0.00 0.00 42.11 3.61
2190 3737 1.105759 GCAGGATGGGATGCAAGGAC 61.106 60.000 0.00 0.00 42.11 3.85
2194 3741 1.064463 GGATGGGATGCAAGGACTGAA 60.064 52.381 0.00 0.00 0.00 3.02
2239 3786 5.505181 TCTAGGGAAAGAGAAAGCAATGT 57.495 39.130 0.00 0.00 0.00 2.71
2265 3812 0.599060 GCTAGATACTCGGTGGGCTC 59.401 60.000 0.00 0.00 0.00 4.70
2286 3833 4.662278 TCTGGTTACCAAGGAAATCAAGG 58.338 43.478 5.31 0.00 30.80 3.61
2301 3848 1.141254 TCAAGGGCAACGGTGACTTAA 59.859 47.619 6.11 0.00 31.06 1.85
2302 3849 1.950909 CAAGGGCAACGGTGACTTAAA 59.049 47.619 6.11 0.00 31.06 1.52
2321 3868 1.652947 AAAACCTCCGGGAAGAGCTA 58.347 50.000 0.00 0.00 36.25 3.32
2351 3898 1.442526 GCGATGGGATGCAAGGACTG 61.443 60.000 0.00 0.00 0.00 3.51
2383 3930 2.257207 CCAGGTCCTGGTCACTAAGAA 58.743 52.381 27.80 0.00 45.82 2.52
2385 3932 2.028020 CAGGTCCTGGTCACTAAGAACC 60.028 54.545 11.46 0.00 30.86 3.62
2389 3936 4.470304 GGTCCTGGTCACTAAGAACCTAAT 59.530 45.833 0.00 0.00 30.86 1.73
2443 3990 4.160439 AGAGTTGATCGATGTAAGGAAGCA 59.840 41.667 0.54 0.00 0.00 3.91
2464 4011 6.063640 GCAACTAGCTAGTACTACCTCTTC 57.936 45.833 26.29 0.00 41.15 2.87
2473 4020 7.342284 AGCTAGTACTACCTCTTCTAATTTGCA 59.658 37.037 0.00 0.00 0.00 4.08
2505 4052 9.367160 TCTCTTTCTAATTTTTCCTGGATGTTT 57.633 29.630 0.00 0.00 0.00 2.83
2508 4055 9.762933 CTTTCTAATTTTTCCTGGATGTTTTGA 57.237 29.630 0.00 0.00 0.00 2.69
2518 4065 3.509442 TGGATGTTTTGAAGGGCTTGAT 58.491 40.909 0.00 0.00 0.00 2.57
2519 4066 3.258872 TGGATGTTTTGAAGGGCTTGATG 59.741 43.478 0.00 0.00 0.00 3.07
2570 4117 0.692419 TGAAGAGGATGGGGGAGCTC 60.692 60.000 4.71 4.71 0.00 4.09
2720 4267 0.397941 ATCAGCCCATGGTACGGATG 59.602 55.000 11.73 4.21 36.87 3.51
2722 4269 1.692749 AGCCCATGGTACGGATGGT 60.693 57.895 11.73 0.00 39.08 3.55
2747 4294 9.579768 GTCTTCTATATTGCTATACATGGAGTG 57.420 37.037 0.00 0.00 0.00 3.51
2791 4338 7.944729 AGTCTTCAGTATATGGTTTGCAAAT 57.055 32.000 16.21 1.69 0.00 2.32
3055 4602 1.441016 GCGCAAACAAGAGGAAGCG 60.441 57.895 0.30 0.00 46.99 4.68
3081 4628 2.703007 GCCCATATATCTAGGAGCTGGG 59.297 54.545 0.00 11.65 43.85 4.45
3082 4629 3.312890 CCCATATATCTAGGAGCTGGGG 58.687 54.545 0.00 0.00 38.53 4.96
3083 4630 3.312890 CCATATATCTAGGAGCTGGGGG 58.687 54.545 0.00 0.00 0.00 5.40
3084 4631 3.310954 CCATATATCTAGGAGCTGGGGGT 60.311 52.174 0.00 0.00 0.00 4.95
3085 4632 4.078571 CCATATATCTAGGAGCTGGGGGTA 60.079 50.000 0.00 0.00 0.00 3.69
3086 4633 2.994957 TATCTAGGAGCTGGGGGTAC 57.005 55.000 0.00 0.00 0.00 3.34
3087 4634 0.941963 ATCTAGGAGCTGGGGGTACA 59.058 55.000 0.00 0.00 0.00 2.90
3088 4635 0.941963 TCTAGGAGCTGGGGGTACAT 59.058 55.000 0.00 0.00 0.00 2.29
3089 4636 1.051812 CTAGGAGCTGGGGGTACATG 58.948 60.000 0.00 0.00 0.00 3.21
3090 4637 1.054406 TAGGAGCTGGGGGTACATGC 61.054 60.000 0.00 0.00 0.00 4.06
3091 4638 2.378634 GGAGCTGGGGGTACATGCT 61.379 63.158 0.00 0.00 36.63 3.79
3092 4639 1.054406 GGAGCTGGGGGTACATGCTA 61.054 60.000 0.00 0.00 33.83 3.49
3158 4705 8.925161 TGTGAAGTAGGCATAATTTAAAATGC 57.075 30.769 14.03 14.03 46.20 3.56
3169 4719 9.925268 GCATAATTTAAAATGCCTTTCATTGAG 57.075 29.630 12.08 0.00 44.23 3.02
3225 4779 8.941995 AAGTGCTATCAGATTAGATGTAGGTA 57.058 34.615 0.00 0.00 0.00 3.08
3228 4782 8.798402 GTGCTATCAGATTAGATGTAGGTAGTT 58.202 37.037 0.00 0.00 0.00 2.24
3232 4786 7.278461 TCAGATTAGATGTAGGTAGTTGCTC 57.722 40.000 0.00 0.00 0.00 4.26
3285 4839 3.971245 AGACAAACCTCCATCTGACTC 57.029 47.619 0.00 0.00 0.00 3.36
3334 4936 5.319139 CAATGTGCTACTCTTTCATTGACG 58.681 41.667 9.61 0.00 44.28 4.35
3335 4937 3.990092 TGTGCTACTCTTTCATTGACGT 58.010 40.909 0.00 0.00 0.00 4.34
3336 4938 5.128992 TGTGCTACTCTTTCATTGACGTA 57.871 39.130 0.00 0.00 0.00 3.57
3337 4939 4.921515 TGTGCTACTCTTTCATTGACGTAC 59.078 41.667 0.00 0.00 0.00 3.67
3338 4940 5.162075 GTGCTACTCTTTCATTGACGTACT 58.838 41.667 0.00 0.00 0.00 2.73
3339 4941 5.286558 GTGCTACTCTTTCATTGACGTACTC 59.713 44.000 0.00 0.00 0.00 2.59
3340 4942 5.183331 TGCTACTCTTTCATTGACGTACTCT 59.817 40.000 0.00 0.00 0.00 3.24
3341 4943 5.513495 GCTACTCTTTCATTGACGTACTCTG 59.487 44.000 0.00 0.00 0.00 3.35
3342 4944 5.455056 ACTCTTTCATTGACGTACTCTGT 57.545 39.130 0.00 0.00 0.00 3.41
3343 4945 6.570672 ACTCTTTCATTGACGTACTCTGTA 57.429 37.500 0.00 0.00 0.00 2.74
3344 4946 6.978338 ACTCTTTCATTGACGTACTCTGTAA 58.022 36.000 0.00 0.00 0.00 2.41
3345 4947 7.431249 ACTCTTTCATTGACGTACTCTGTAAA 58.569 34.615 0.00 0.00 0.00 2.01
3346 4948 7.381678 ACTCTTTCATTGACGTACTCTGTAAAC 59.618 37.037 0.00 0.00 0.00 2.01
3347 4949 7.431249 TCTTTCATTGACGTACTCTGTAAACT 58.569 34.615 0.00 0.00 0.00 2.66
3348 4950 8.570488 TCTTTCATTGACGTACTCTGTAAACTA 58.430 33.333 0.00 0.00 0.00 2.24
3349 4951 9.188588 CTTTCATTGACGTACTCTGTAAACTAA 57.811 33.333 0.00 0.00 0.00 2.24
3350 4952 9.701098 TTTCATTGACGTACTCTGTAAACTAAT 57.299 29.630 0.00 0.00 0.00 1.73
3359 4961 9.315680 CGTACTCTGTAAACTAATATAAGAGCG 57.684 37.037 0.00 0.00 0.00 5.03
3374 4976 4.657436 AAGAGCGTTTAGATCACTAGGG 57.343 45.455 0.00 0.00 37.82 3.53
3375 4977 3.899726 AGAGCGTTTAGATCACTAGGGA 58.100 45.455 0.00 0.00 37.82 4.20
3376 4978 3.886505 AGAGCGTTTAGATCACTAGGGAG 59.113 47.826 0.00 0.00 37.82 4.30
3386 4988 9.976776 TTTAGATCACTAGGGAGTATATGGTAG 57.023 37.037 0.00 0.00 33.32 3.18
3493 5220 5.018539 ACAGCAAAGCATATAACCGACTA 57.981 39.130 0.00 0.00 0.00 2.59
3499 5226 6.310711 GCAAAGCATATAACCGACTAGGATAC 59.689 42.308 0.00 0.00 45.00 2.24
3533 5260 8.623903 TCATCATAAGGAATTTTAGTGATGTGC 58.376 33.333 10.95 0.00 41.16 4.57
3534 5261 8.627403 CATCATAAGGAATTTTAGTGATGTGCT 58.373 33.333 0.00 0.00 37.66 4.40
3535 5262 7.988737 TCATAAGGAATTTTAGTGATGTGCTG 58.011 34.615 0.00 0.00 0.00 4.41
3536 5263 7.611467 TCATAAGGAATTTTAGTGATGTGCTGT 59.389 33.333 0.00 0.00 0.00 4.40
3537 5264 6.655078 AAGGAATTTTAGTGATGTGCTGTT 57.345 33.333 0.00 0.00 0.00 3.16
3538 5265 6.259550 AGGAATTTTAGTGATGTGCTGTTC 57.740 37.500 0.00 0.00 0.00 3.18
3577 5304 9.134734 GCTATGCAGATACTACATAAACTTCTC 57.865 37.037 0.00 0.00 0.00 2.87
3597 5324 5.269991 TCTCAGGTAGTAAATGGTAGTGCT 58.730 41.667 0.00 0.00 0.00 4.40
3628 5355 6.019075 GTGGTGCTGTTTTAAATTTGAAGTCC 60.019 38.462 0.00 0.00 0.00 3.85
3635 5362 7.616313 TGTTTTAAATTTGAAGTCCCACAAGT 58.384 30.769 0.00 0.00 0.00 3.16
3638 5365 5.930837 AAATTTGAAGTCCCACAAGTTCA 57.069 34.783 0.00 0.00 36.93 3.18
3642 5369 5.514274 TTGAAGTCCCACAAGTTCAATTC 57.486 39.130 3.42 0.00 41.41 2.17
3662 5389 9.177608 TCAATTCTTACTTCAATATGGTTCTGG 57.822 33.333 0.00 0.00 0.00 3.86
3708 5435 1.375013 GGCAACAGCCCAAATGCAG 60.375 57.895 0.00 0.00 42.80 4.41
3767 5502 7.960793 TGCGATTTTACTTCTTTCTTAGTAGC 58.039 34.615 0.00 0.00 0.00 3.58
3768 5503 7.064253 TGCGATTTTACTTCTTTCTTAGTAGCC 59.936 37.037 0.00 0.00 0.00 3.93
3773 7042 9.623000 TTTTACTTCTTTCTTAGTAGCCAAGTT 57.377 29.630 0.00 0.00 0.00 2.66
3826 7106 7.707893 ACTGATATTTGTGCCATTTTGAATAGC 59.292 33.333 0.00 0.00 0.00 2.97
3838 7118 7.436376 GCCATTTTGAATAGCAGTAGGAATTTC 59.564 37.037 0.00 0.00 0.00 2.17
3933 7375 4.079253 GGAAACCAGTTTATGCAGGAAGA 58.921 43.478 0.00 0.00 32.11 2.87
3934 7376 4.706962 GGAAACCAGTTTATGCAGGAAGAT 59.293 41.667 0.00 0.00 32.11 2.40
3954 7408 1.538047 AGTGCGAATTGCCTGACATT 58.462 45.000 0.00 0.00 45.60 2.71
3957 7411 2.409378 GTGCGAATTGCCTGACATTTTG 59.591 45.455 0.00 0.00 45.60 2.44
3958 7412 2.035704 TGCGAATTGCCTGACATTTTGT 59.964 40.909 0.00 0.00 45.60 2.83
3959 7413 3.254411 TGCGAATTGCCTGACATTTTGTA 59.746 39.130 0.00 0.00 45.60 2.41
3960 7414 4.082300 TGCGAATTGCCTGACATTTTGTAT 60.082 37.500 0.00 0.00 45.60 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.405172 GAGGGAGAGTTTCGTCAACAC 58.595 52.381 3.61 0.00 37.93 3.32
7 8 1.000607 CGAGGGAGAGTTTCGTCAACA 60.001 52.381 3.61 0.00 37.93 3.33
8 9 1.268899 TCGAGGGAGAGTTTCGTCAAC 59.731 52.381 0.00 0.00 35.90 3.18
9 10 1.612676 TCGAGGGAGAGTTTCGTCAA 58.387 50.000 0.00 0.00 35.90 3.18
10 11 1.540267 CTTCGAGGGAGAGTTTCGTCA 59.460 52.381 0.00 0.00 35.90 4.35
11 12 1.733061 GCTTCGAGGGAGAGTTTCGTC 60.733 57.143 0.00 0.00 35.90 4.20
12 13 0.244178 GCTTCGAGGGAGAGTTTCGT 59.756 55.000 0.00 0.00 35.90 3.85
13 14 0.528470 AGCTTCGAGGGAGAGTTTCG 59.472 55.000 0.00 0.00 35.76 3.46
14 15 1.822371 AGAGCTTCGAGGGAGAGTTTC 59.178 52.381 0.00 0.00 0.00 2.78
15 16 1.931635 AGAGCTTCGAGGGAGAGTTT 58.068 50.000 0.00 0.00 0.00 2.66
16 17 2.025699 AGTAGAGCTTCGAGGGAGAGTT 60.026 50.000 0.00 0.00 0.00 3.01
17 18 1.562475 AGTAGAGCTTCGAGGGAGAGT 59.438 52.381 0.00 0.00 0.00 3.24
18 19 1.946768 CAGTAGAGCTTCGAGGGAGAG 59.053 57.143 0.00 0.00 0.00 3.20
19 20 1.408961 CCAGTAGAGCTTCGAGGGAGA 60.409 57.143 0.00 0.00 0.00 3.71
20 21 1.028905 CCAGTAGAGCTTCGAGGGAG 58.971 60.000 0.00 0.00 0.00 4.30
21 22 0.624254 TCCAGTAGAGCTTCGAGGGA 59.376 55.000 0.00 0.00 0.00 4.20
22 23 1.611491 GATCCAGTAGAGCTTCGAGGG 59.389 57.143 0.00 0.00 0.00 4.30
23 24 1.265635 CGATCCAGTAGAGCTTCGAGG 59.734 57.143 0.00 0.00 29.17 4.63
24 25 1.944024 ACGATCCAGTAGAGCTTCGAG 59.056 52.381 7.14 0.00 31.51 4.04
25 26 1.671328 CACGATCCAGTAGAGCTTCGA 59.329 52.381 7.14 0.00 31.51 3.71
26 27 1.671328 TCACGATCCAGTAGAGCTTCG 59.329 52.381 0.00 0.00 32.83 3.79
27 28 2.685897 ACTCACGATCCAGTAGAGCTTC 59.314 50.000 0.00 0.00 0.00 3.86
28 29 2.729194 ACTCACGATCCAGTAGAGCTT 58.271 47.619 0.00 0.00 0.00 3.74
29 30 2.428544 ACTCACGATCCAGTAGAGCT 57.571 50.000 0.00 0.00 0.00 4.09
30 31 2.539953 CGAACTCACGATCCAGTAGAGC 60.540 54.545 0.00 0.00 35.09 4.09
31 32 2.678836 ACGAACTCACGATCCAGTAGAG 59.321 50.000 0.00 0.00 37.03 2.43
32 33 2.418976 CACGAACTCACGATCCAGTAGA 59.581 50.000 0.00 0.00 37.03 2.59
33 34 2.478031 CCACGAACTCACGATCCAGTAG 60.478 54.545 0.00 0.00 37.03 2.57
34 35 1.471287 CCACGAACTCACGATCCAGTA 59.529 52.381 0.00 0.00 37.03 2.74
35 36 0.243907 CCACGAACTCACGATCCAGT 59.756 55.000 0.00 0.00 37.03 4.00
36 37 0.458543 CCCACGAACTCACGATCCAG 60.459 60.000 0.00 0.00 37.03 3.86
37 38 0.896479 TCCCACGAACTCACGATCCA 60.896 55.000 0.00 0.00 37.03 3.41
38 39 0.458025 GTCCCACGAACTCACGATCC 60.458 60.000 0.00 0.00 37.03 3.36
39 40 0.797249 CGTCCCACGAACTCACGATC 60.797 60.000 0.00 0.00 46.05 3.69
40 41 1.211969 CGTCCCACGAACTCACGAT 59.788 57.895 0.00 0.00 46.05 3.73
41 42 2.121564 GACGTCCCACGAACTCACGA 62.122 60.000 3.51 0.00 46.05 4.35
42 43 1.728426 GACGTCCCACGAACTCACG 60.728 63.158 3.51 0.00 46.05 4.35
43 44 0.249155 TTGACGTCCCACGAACTCAC 60.249 55.000 14.12 0.00 46.05 3.51
44 45 0.249155 GTTGACGTCCCACGAACTCA 60.249 55.000 14.12 0.00 46.05 3.41
45 46 1.273455 CGTTGACGTCCCACGAACTC 61.273 60.000 25.38 0.00 46.05 3.01
46 47 1.299620 CGTTGACGTCCCACGAACT 60.300 57.895 25.38 0.00 46.05 3.01
47 48 1.273455 CTCGTTGACGTCCCACGAAC 61.273 60.000 29.14 18.90 46.05 3.95
48 49 1.008194 CTCGTTGACGTCCCACGAA 60.008 57.895 29.14 18.38 46.05 3.85
49 50 2.640989 CTCGTTGACGTCCCACGA 59.359 61.111 28.22 28.22 46.05 4.35
51 52 2.737376 GGCTCGTTGACGTCCCAC 60.737 66.667 14.12 8.98 40.80 4.61
52 53 4.351938 CGGCTCGTTGACGTCCCA 62.352 66.667 14.12 0.00 43.40 4.37
58 59 0.163788 CACATGTTCGGCTCGTTGAC 59.836 55.000 0.00 0.00 0.00 3.18
59 60 1.565156 GCACATGTTCGGCTCGTTGA 61.565 55.000 0.00 0.00 0.00 3.18
60 61 1.154413 GCACATGTTCGGCTCGTTG 60.154 57.895 0.00 0.00 0.00 4.10
61 62 0.955428 ATGCACATGTTCGGCTCGTT 60.955 50.000 0.00 0.00 0.00 3.85
62 63 0.108377 TATGCACATGTTCGGCTCGT 60.108 50.000 0.00 0.00 0.00 4.18
63 64 1.220529 ATATGCACATGTTCGGCTCG 58.779 50.000 0.00 0.00 0.00 5.03
64 65 2.855953 GCAATATGCACATGTTCGGCTC 60.856 50.000 0.00 0.00 44.26 4.70
65 66 1.066002 GCAATATGCACATGTTCGGCT 59.934 47.619 0.00 0.00 44.26 5.52
66 67 1.480205 GCAATATGCACATGTTCGGC 58.520 50.000 0.00 0.00 44.26 5.54
67 68 1.597690 CCGCAATATGCACATGTTCGG 60.598 52.381 0.00 12.62 45.36 4.30
68 69 1.330213 TCCGCAATATGCACATGTTCG 59.670 47.619 0.00 0.00 45.36 3.95
69 70 2.287188 CCTCCGCAATATGCACATGTTC 60.287 50.000 0.00 0.00 45.36 3.18
70 71 1.677576 CCTCCGCAATATGCACATGTT 59.322 47.619 0.00 0.00 45.36 2.71
71 72 1.311859 CCTCCGCAATATGCACATGT 58.688 50.000 0.00 0.00 45.36 3.21
72 73 1.002142 CACCTCCGCAATATGCACATG 60.002 52.381 2.99 0.00 45.36 3.21
73 74 1.311859 CACCTCCGCAATATGCACAT 58.688 50.000 2.99 0.00 45.36 3.21
74 75 0.035534 ACACCTCCGCAATATGCACA 60.036 50.000 2.99 0.00 45.36 4.57
75 76 0.657840 GACACCTCCGCAATATGCAC 59.342 55.000 2.99 0.00 45.36 4.57
76 77 0.809636 CGACACCTCCGCAATATGCA 60.810 55.000 2.99 0.00 45.36 3.96
77 78 0.810031 ACGACACCTCCGCAATATGC 60.810 55.000 0.00 0.00 40.69 3.14
78 79 2.124903 GTACGACACCTCCGCAATATG 58.875 52.381 0.00 0.00 0.00 1.78
79 80 1.752498 TGTACGACACCTCCGCAATAT 59.248 47.619 0.00 0.00 0.00 1.28
80 81 1.175654 TGTACGACACCTCCGCAATA 58.824 50.000 0.00 0.00 0.00 1.90
81 82 0.535335 ATGTACGACACCTCCGCAAT 59.465 50.000 0.00 0.00 0.00 3.56
82 83 0.319083 AATGTACGACACCTCCGCAA 59.681 50.000 0.00 0.00 0.00 4.85
83 84 0.108992 GAATGTACGACACCTCCGCA 60.109 55.000 0.00 0.00 0.00 5.69
84 85 1.138047 CGAATGTACGACACCTCCGC 61.138 60.000 0.00 0.00 35.09 5.54
85 86 0.524816 CCGAATGTACGACACCTCCG 60.525 60.000 0.00 0.00 35.09 4.63
86 87 0.529378 ACCGAATGTACGACACCTCC 59.471 55.000 0.00 0.00 35.09 4.30
87 88 1.625616 CACCGAATGTACGACACCTC 58.374 55.000 0.00 0.00 35.09 3.85
88 89 0.389426 GCACCGAATGTACGACACCT 60.389 55.000 0.00 0.00 35.09 4.00
89 90 0.389426 AGCACCGAATGTACGACACC 60.389 55.000 0.00 0.00 35.09 4.16
90 91 2.159476 TCTAGCACCGAATGTACGACAC 60.159 50.000 0.00 0.00 35.09 3.67
91 92 2.086094 TCTAGCACCGAATGTACGACA 58.914 47.619 0.00 0.00 35.09 4.35
92 93 2.838386 TCTAGCACCGAATGTACGAC 57.162 50.000 0.00 0.00 35.09 4.34
93 94 3.490249 CCAATCTAGCACCGAATGTACGA 60.490 47.826 0.00 0.00 35.09 3.43
94 95 2.794910 CCAATCTAGCACCGAATGTACG 59.205 50.000 0.00 0.00 0.00 3.67
95 96 3.793559 ACCAATCTAGCACCGAATGTAC 58.206 45.455 0.00 0.00 0.00 2.90
96 97 3.490249 CGACCAATCTAGCACCGAATGTA 60.490 47.826 0.00 0.00 0.00 2.29
97 98 2.738643 CGACCAATCTAGCACCGAATGT 60.739 50.000 0.00 0.00 0.00 2.71
98 99 1.860950 CGACCAATCTAGCACCGAATG 59.139 52.381 0.00 0.00 0.00 2.67
99 100 1.754803 TCGACCAATCTAGCACCGAAT 59.245 47.619 0.00 0.00 0.00 3.34
100 101 1.179152 TCGACCAATCTAGCACCGAA 58.821 50.000 0.00 0.00 0.00 4.30
101 102 1.337071 GATCGACCAATCTAGCACCGA 59.663 52.381 0.00 0.00 0.00 4.69
102 103 1.772182 GATCGACCAATCTAGCACCG 58.228 55.000 0.00 0.00 0.00 4.94
103 104 1.067212 ACGATCGACCAATCTAGCACC 59.933 52.381 24.34 0.00 0.00 5.01
104 105 2.120232 CACGATCGACCAATCTAGCAC 58.880 52.381 24.34 0.00 0.00 4.40
105 106 2.021457 TCACGATCGACCAATCTAGCA 58.979 47.619 24.34 0.00 0.00 3.49
106 107 2.776312 TCACGATCGACCAATCTAGC 57.224 50.000 24.34 0.00 0.00 3.42
107 108 4.283678 GTCTTCACGATCGACCAATCTAG 58.716 47.826 24.34 7.17 0.00 2.43
108 109 4.288670 GTCTTCACGATCGACCAATCTA 57.711 45.455 24.34 0.00 0.00 1.98
109 110 3.152261 GTCTTCACGATCGACCAATCT 57.848 47.619 24.34 0.00 0.00 2.40
122 123 4.332186 TGATGTAGTCGTACGTCTTCAC 57.668 45.455 19.61 13.19 43.23 3.18
123 124 4.378770 GGTTGATGTAGTCGTACGTCTTCA 60.379 45.833 19.61 19.79 43.23 3.02
124 125 4.094212 GGTTGATGTAGTCGTACGTCTTC 58.906 47.826 19.61 15.02 43.23 2.87
125 126 3.425359 CGGTTGATGTAGTCGTACGTCTT 60.425 47.826 19.61 2.66 43.23 3.01
126 127 2.094894 CGGTTGATGTAGTCGTACGTCT 59.905 50.000 18.54 18.54 43.23 4.18
127 128 2.434761 CGGTTGATGTAGTCGTACGTC 58.565 52.381 16.05 10.06 43.16 4.34
128 129 1.466360 GCGGTTGATGTAGTCGTACGT 60.466 52.381 16.05 0.00 30.95 3.57
129 130 1.186030 GCGGTTGATGTAGTCGTACG 58.814 55.000 9.53 9.53 30.95 3.67
130 131 1.186030 CGCGGTTGATGTAGTCGTAC 58.814 55.000 0.00 0.00 0.00 3.67
131 132 0.804364 ACGCGGTTGATGTAGTCGTA 59.196 50.000 12.47 0.00 0.00 3.43
132 133 0.038892 AACGCGGTTGATGTAGTCGT 60.039 50.000 12.47 0.00 0.00 4.34
133 134 0.365523 CAACGCGGTTGATGTAGTCG 59.634 55.000 12.47 0.00 45.28 4.18
134 135 1.389106 GACAACGCGGTTGATGTAGTC 59.611 52.381 22.26 10.01 45.28 2.59
135 136 1.269883 TGACAACGCGGTTGATGTAGT 60.270 47.619 22.26 4.69 45.28 2.73
136 137 1.424403 TGACAACGCGGTTGATGTAG 58.576 50.000 22.26 1.41 45.28 2.74
137 138 2.087501 ATGACAACGCGGTTGATGTA 57.912 45.000 22.26 9.68 45.28 2.29
138 139 2.087501 TATGACAACGCGGTTGATGT 57.912 45.000 22.26 13.84 45.28 3.06
139 140 2.769376 GTTATGACAACGCGGTTGATG 58.231 47.619 22.26 11.18 45.28 3.07
140 141 1.392168 CGTTATGACAACGCGGTTGAT 59.608 47.619 22.26 12.10 45.28 2.57
141 142 0.785378 CGTTATGACAACGCGGTTGA 59.215 50.000 22.26 6.79 45.28 3.18
148 149 3.850207 CGGAAGCGTTATGACAACG 57.150 52.632 5.22 5.22 45.56 4.10
165 166 1.354506 CCCTCGTAGACCGTAAGCG 59.645 63.158 0.00 0.00 37.94 4.68
166 167 1.332065 GTACCCTCGTAGACCGTAAGC 59.668 57.143 0.00 0.00 37.94 3.09
167 168 1.594862 CGTACCCTCGTAGACCGTAAG 59.405 57.143 0.00 0.00 37.94 2.34
168 169 1.066430 ACGTACCCTCGTAGACCGTAA 60.066 52.381 0.00 0.00 42.35 3.18
169 170 0.535335 ACGTACCCTCGTAGACCGTA 59.465 55.000 0.00 0.00 42.35 4.02
170 171 0.535335 TACGTACCCTCGTAGACCGT 59.465 55.000 0.00 0.00 43.80 4.83
171 172 3.362581 TACGTACCCTCGTAGACCG 57.637 57.895 0.00 0.00 43.80 4.79
176 177 2.890808 ATCGTCTACGTACCCTCGTA 57.109 50.000 2.02 0.00 43.80 3.43
177 178 2.101582 AGTATCGTCTACGTACCCTCGT 59.898 50.000 2.02 0.00 45.97 4.18
178 179 2.728839 GAGTATCGTCTACGTACCCTCG 59.271 54.545 2.02 0.00 40.80 4.63
179 180 3.987220 GAGAGTATCGTCTACGTACCCTC 59.013 52.174 2.02 6.69 42.67 4.30
180 181 3.244044 GGAGAGTATCGTCTACGTACCCT 60.244 52.174 2.02 1.57 42.67 4.34
181 182 3.063485 GGAGAGTATCGTCTACGTACCC 58.937 54.545 2.02 0.00 42.67 3.69
182 183 3.063485 GGGAGAGTATCGTCTACGTACC 58.937 54.545 2.02 0.00 42.67 3.34
183 184 3.063485 GGGGAGAGTATCGTCTACGTAC 58.937 54.545 2.02 5.08 42.67 3.67
184 185 2.968574 AGGGGAGAGTATCGTCTACGTA 59.031 50.000 2.02 0.00 42.67 3.57
185 186 1.767681 AGGGGAGAGTATCGTCTACGT 59.232 52.381 2.02 0.00 42.67 3.57
186 187 2.037511 AGAGGGGAGAGTATCGTCTACG 59.962 54.545 0.00 0.00 42.67 3.51
187 188 3.667360 GAGAGGGGAGAGTATCGTCTAC 58.333 54.545 0.00 0.00 42.67 2.59
188 189 2.299582 CGAGAGGGGAGAGTATCGTCTA 59.700 54.545 0.00 0.00 42.67 2.59
189 190 1.071071 CGAGAGGGGAGAGTATCGTCT 59.929 57.143 0.00 0.00 42.67 4.18
190 191 1.202675 ACGAGAGGGGAGAGTATCGTC 60.203 57.143 0.00 0.00 42.67 4.20
191 192 0.838608 ACGAGAGGGGAGAGTATCGT 59.161 55.000 0.00 0.00 42.67 3.73
192 193 1.604755 CAACGAGAGGGGAGAGTATCG 59.395 57.143 0.00 0.00 42.67 2.92
193 194 1.338655 GCAACGAGAGGGGAGAGTATC 59.661 57.143 0.00 0.00 0.00 2.24
194 195 1.063567 AGCAACGAGAGGGGAGAGTAT 60.064 52.381 0.00 0.00 0.00 2.12
195 196 0.331954 AGCAACGAGAGGGGAGAGTA 59.668 55.000 0.00 0.00 0.00 2.59
196 197 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
197 198 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
198 199 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
199 200 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
200 201 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
201 202 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
202 203 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
203 204 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
204 205 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
205 206 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
206 207 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
207 208 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
208 209 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
209 210 3.819337 AGATCATGGTGATGCATAGCAAC 59.181 43.478 0.00 0.00 43.62 4.17
210 211 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
211 212 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
212 213 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
213 214 3.818773 TGCAAGATCATGGTGATGCATAG 59.181 43.478 10.42 0.00 35.67 2.23
214 215 3.822940 TGCAAGATCATGGTGATGCATA 58.177 40.909 10.42 0.00 35.67 3.14
215 216 2.661718 TGCAAGATCATGGTGATGCAT 58.338 42.857 10.42 0.00 35.67 3.96
216 217 2.131776 TGCAAGATCATGGTGATGCA 57.868 45.000 10.42 10.42 37.51 3.96
217 218 2.361119 ACATGCAAGATCATGGTGATGC 59.639 45.455 5.77 5.77 46.02 3.91
218 219 3.795488 GCACATGCAAGATCATGGTGATG 60.795 47.826 9.18 0.66 46.02 3.07
219 220 2.361119 GCACATGCAAGATCATGGTGAT 59.639 45.455 9.18 0.00 46.02 3.06
220 221 1.746787 GCACATGCAAGATCATGGTGA 59.253 47.619 9.18 0.00 46.02 4.02
221 222 1.533129 CGCACATGCAAGATCATGGTG 60.533 52.381 4.49 1.26 46.02 4.17
222 223 0.736636 CGCACATGCAAGATCATGGT 59.263 50.000 4.49 0.00 46.02 3.55
223 224 0.736636 ACGCACATGCAAGATCATGG 59.263 50.000 4.49 0.00 46.02 3.66
224 225 2.867975 TCTACGCACATGCAAGATCATG 59.132 45.455 4.49 0.00 46.86 3.07
225 226 3.183793 TCTACGCACATGCAAGATCAT 57.816 42.857 4.49 0.00 42.21 2.45
226 227 2.671130 TCTACGCACATGCAAGATCA 57.329 45.000 4.49 0.00 42.21 2.92
227 228 4.542662 AATTCTACGCACATGCAAGATC 57.457 40.909 4.49 0.00 42.21 2.75
228 229 4.970662 AAATTCTACGCACATGCAAGAT 57.029 36.364 4.49 0.00 42.21 2.40
229 230 4.764679 AAAATTCTACGCACATGCAAGA 57.235 36.364 4.49 3.42 42.21 3.02
230 231 5.156355 AGAAAAATTCTACGCACATGCAAG 58.844 37.500 4.49 0.96 38.57 4.01
231 232 5.119931 AGAAAAATTCTACGCACATGCAA 57.880 34.783 4.49 0.00 38.57 4.08
232 233 4.764679 AGAAAAATTCTACGCACATGCA 57.235 36.364 4.49 0.00 38.57 3.96
233 234 6.452244 AAAAGAAAAATTCTACGCACATGC 57.548 33.333 0.00 0.00 39.61 4.06
234 235 8.060020 TCAAAAAGAAAAATTCTACGCACATG 57.940 30.769 0.00 0.00 39.61 3.21
235 236 8.641499 TTCAAAAAGAAAAATTCTACGCACAT 57.359 26.923 0.00 0.00 39.61 3.21
236 237 8.467402 TTTCAAAAAGAAAAATTCTACGCACA 57.533 26.923 0.00 0.00 43.00 4.57
244 245 9.914923 ACGCAGTAATTTCAAAAAGAAAAATTC 57.085 25.926 0.00 0.00 45.02 2.17
246 247 9.914923 GAACGCAGTAATTTCAAAAAGAAAAAT 57.085 25.926 0.00 0.00 45.76 1.82
247 248 8.384365 GGAACGCAGTAATTTCAAAAAGAAAAA 58.616 29.630 0.00 0.00 45.76 1.94
248 249 7.010645 GGGAACGCAGTAATTTCAAAAAGAAAA 59.989 33.333 0.00 0.00 45.76 2.29
249 250 6.477360 GGGAACGCAGTAATTTCAAAAAGAAA 59.523 34.615 0.00 0.00 46.41 2.52
250 251 5.980715 GGGAACGCAGTAATTTCAAAAAGAA 59.019 36.000 0.00 0.00 45.00 2.52
251 252 5.508320 GGGGAACGCAGTAATTTCAAAAAGA 60.508 40.000 0.00 0.00 45.00 2.52
252 253 4.684242 GGGGAACGCAGTAATTTCAAAAAG 59.316 41.667 0.00 0.00 45.00 2.27
253 254 4.623002 GGGGAACGCAGTAATTTCAAAAA 58.377 39.130 0.00 0.00 45.00 1.94
254 255 4.245845 GGGGAACGCAGTAATTTCAAAA 57.754 40.909 0.00 0.00 45.00 2.44
255 256 3.926821 GGGGAACGCAGTAATTTCAAA 57.073 42.857 0.00 0.00 45.00 2.69
267 268 2.289257 ACTAGTACTTGTTGGGGAACGC 60.289 50.000 0.00 0.00 43.69 4.84
268 269 3.672767 ACTAGTACTTGTTGGGGAACG 57.327 47.619 0.00 0.00 0.00 3.95
269 270 6.106648 AGTAACTAGTACTTGTTGGGGAAC 57.893 41.667 26.39 18.00 40.33 3.62
270 271 7.093201 CCATAGTAACTAGTACTTGTTGGGGAA 60.093 40.741 26.39 8.76 40.33 3.97
271 272 6.381994 CCATAGTAACTAGTACTTGTTGGGGA 59.618 42.308 26.39 13.09 40.33 4.81
272 273 6.381994 TCCATAGTAACTAGTACTTGTTGGGG 59.618 42.308 26.39 19.71 40.33 4.96
273 274 7.414222 TCCATAGTAACTAGTACTTGTTGGG 57.586 40.000 26.39 19.46 40.33 4.12
274 275 9.886132 AAATCCATAGTAACTAGTACTTGTTGG 57.114 33.333 26.39 20.50 40.33 3.77
312 313 9.979578 AGTGTGCATACTGAAAAATATTGAAAA 57.020 25.926 16.04 0.00 0.00 2.29
416 417 3.634910 ACCACAAGTGCGAAATAACCTTT 59.365 39.130 0.00 0.00 0.00 3.11
470 471 3.872696 TGTGGAATAAGCATCACATCGT 58.127 40.909 0.00 0.00 35.52 3.73
471 472 5.209977 CAATGTGGAATAAGCATCACATCG 58.790 41.667 8.03 0.00 46.27 3.84
483 484 3.127895 GCAAAGGCGTACAATGTGGAATA 59.872 43.478 0.00 0.00 0.00 1.75
487 488 0.595588 TGCAAAGGCGTACAATGTGG 59.404 50.000 0.00 0.00 45.35 4.17
515 516 6.499106 TTGTCATGTCTGGTATACCATCAT 57.501 37.500 24.78 24.74 46.46 2.45
552 553 9.787532 TTTTATTAATTGTCATTGTCTAGCTGC 57.212 29.630 0.00 0.00 0.00 5.25
615 616 9.429109 TCCATACCATTGTTTACTAGTATCTGA 57.571 33.333 2.79 0.00 0.00 3.27
630 631 8.317679 TCAACCCTTTTATTTTCCATACCATTG 58.682 33.333 0.00 0.00 0.00 2.82
645 646 9.921637 CACTTATTAATGCTTTCAACCCTTTTA 57.078 29.630 0.00 0.00 0.00 1.52
731 1147 7.342799 TCTTCTTCTCCCCATCAAAATAAATGG 59.657 37.037 0.00 0.00 41.81 3.16
748 1170 8.491331 AGTTAATGCTTGAGATTCTTCTTCTC 57.509 34.615 0.00 0.00 40.06 2.87
753 1175 8.897752 ACCATTAGTTAATGCTTGAGATTCTTC 58.102 33.333 6.39 0.00 41.23 2.87
810 1232 2.208619 TGTGCAACATTGGGGGCAG 61.209 57.895 0.00 0.00 45.67 4.85
868 1292 0.387239 GGCAACCAACGATTCACTGC 60.387 55.000 0.00 0.00 0.00 4.40
896 1328 1.280457 GGAAAGCTGAGGAGGAGGAA 58.720 55.000 0.00 0.00 0.00 3.36
947 1379 1.488812 GTTGGGGTTTGGGAAAGCTTT 59.511 47.619 12.53 12.53 38.83 3.51
959 1391 2.366153 AATGGAGTGCGGTTGGGGTT 62.366 55.000 0.00 0.00 0.00 4.11
969 1401 3.195698 GGTCGGCGAATGGAGTGC 61.196 66.667 12.92 0.00 0.00 4.40
983 1415 2.673368 GACATTGTTGGACTGATCGGTC 59.327 50.000 24.13 24.13 35.66 4.79
987 1419 4.245660 TCTTCGACATTGTTGGACTGATC 58.754 43.478 4.20 0.00 0.00 2.92
1546 2277 0.744414 ATGCACCATCCCGAACTTCG 60.744 55.000 4.07 4.07 40.07 3.79
1594 2325 1.076632 ATCTCCTTCTCGGCGAGGT 60.077 57.895 33.93 4.08 28.22 3.85
1613 2344 2.266055 CCCTTGCTCAGGTCGACC 59.734 66.667 27.67 27.67 42.02 4.79
1619 2350 1.606531 CCTTCTCCCCTTGCTCAGG 59.393 63.158 0.00 0.00 43.49 3.86
1623 2354 3.342477 GGGCCTTCTCCCCTTGCT 61.342 66.667 0.84 0.00 40.51 3.91
1658 2389 3.774528 CTCTGCAGGTAGGCGGCA 61.775 66.667 15.13 0.00 40.04 5.69
1664 2395 1.068895 CAGATGAGCCTCTGCAGGTAG 59.931 57.143 15.13 4.48 42.74 3.18
1680 2411 1.635817 CCCGGATTGTCCACCCAGAT 61.636 60.000 0.73 0.00 35.91 2.90
1684 2415 4.815108 GGCCCGGATTGTCCACCC 62.815 72.222 0.73 0.00 35.91 4.61
1691 2422 1.153086 CTGGAAGAGGCCCGGATTG 60.153 63.158 0.73 0.00 34.07 2.67
1785 2516 0.461693 AGCAGCTTGGATCTCGCTTC 60.462 55.000 0.00 0.00 0.00 3.86
1786 2517 0.461693 GAGCAGCTTGGATCTCGCTT 60.462 55.000 0.00 0.00 0.00 4.68
1808 2539 2.202851 AGCAGCTTGGATCTCGCG 60.203 61.111 0.00 0.00 0.00 5.87
1809 2540 2.178890 CCAGCAGCTTGGATCTCGC 61.179 63.158 0.00 0.00 40.87 5.03
1810 2541 1.519246 TCCAGCAGCTTGGATCTCG 59.481 57.895 2.82 0.00 42.24 4.04
1815 2546 2.431683 GGTGTCCAGCAGCTTGGA 59.568 61.111 2.82 2.82 44.84 3.53
1816 2547 2.113774 TGGTGTCCAGCAGCTTGG 59.886 61.111 0.00 0.00 45.23 3.61
1825 2556 3.695606 GCTCGGCTCTGGTGTCCA 61.696 66.667 0.00 0.00 0.00 4.02
1826 2557 3.695606 TGCTCGGCTCTGGTGTCC 61.696 66.667 0.00 0.00 0.00 4.02
1827 2558 2.433318 GTGCTCGGCTCTGGTGTC 60.433 66.667 0.00 0.00 0.00 3.67
1828 2559 4.008933 GGTGCTCGGCTCTGGTGT 62.009 66.667 0.00 0.00 0.00 4.16
1829 2560 3.245668 AAGGTGCTCGGCTCTGGTG 62.246 63.158 0.00 0.00 0.00 4.17
1830 2561 2.925170 AAGGTGCTCGGCTCTGGT 60.925 61.111 0.00 0.00 0.00 4.00
1831 2562 2.435586 CAAGGTGCTCGGCTCTGG 60.436 66.667 0.00 0.00 0.00 3.86
1832 2563 0.392193 ATTCAAGGTGCTCGGCTCTG 60.392 55.000 0.00 0.00 0.00 3.35
1833 2564 0.107945 GATTCAAGGTGCTCGGCTCT 60.108 55.000 0.00 0.00 0.00 4.09
1834 2565 1.092345 GGATTCAAGGTGCTCGGCTC 61.092 60.000 0.00 0.00 0.00 4.70
1835 2566 1.078143 GGATTCAAGGTGCTCGGCT 60.078 57.895 0.00 0.00 0.00 5.52
1836 2567 0.960364 TTGGATTCAAGGTGCTCGGC 60.960 55.000 0.00 0.00 0.00 5.54
1856 2587 2.143925 CGTTCTTCCAGTTCCTTGGAC 58.856 52.381 0.00 0.00 46.61 4.02
1859 2590 1.523758 CCCGTTCTTCCAGTTCCTTG 58.476 55.000 0.00 0.00 0.00 3.61
1878 2609 1.082496 GTGTCTTGCTTGCGAGTGC 60.082 57.895 9.41 5.36 43.20 4.40
1881 2612 2.135139 TGTTAGTGTCTTGCTTGCGAG 58.865 47.619 3.55 3.55 0.00 5.03
1892 2623 4.082463 AGCAGCTCTAACTCTGTTAGTGTC 60.082 45.833 14.60 9.83 38.88 3.67
1894 2625 4.082517 TGAGCAGCTCTAACTCTGTTAGTG 60.083 45.833 23.15 13.47 38.88 2.74
1928 2659 1.291877 TTGCTTCTTTCTCGGCGAGC 61.292 55.000 31.01 19.05 0.00 5.03
1932 2663 2.226437 TGTTGATTGCTTCTTTCTCGGC 59.774 45.455 0.00 0.00 0.00 5.54
1934 2665 4.212004 TCACTGTTGATTGCTTCTTTCTCG 59.788 41.667 0.00 0.00 0.00 4.04
1945 2676 3.005554 CCTACCAGCTCACTGTTGATTG 58.994 50.000 0.00 0.00 42.81 2.67
1959 2690 0.324738 TCCTCCTGCACTCCTACCAG 60.325 60.000 0.00 0.00 0.00 4.00
1964 3511 1.988956 CAGCTCCTCCTGCACTCCT 60.989 63.158 0.00 0.00 0.00 3.69
2050 3597 6.148645 GCTCTTTCTTTCCCTAGAAAACAGAG 59.851 42.308 0.00 0.00 42.01 3.35
2054 3601 6.635030 TTGCTCTTTCTTTCCCTAGAAAAC 57.365 37.500 0.00 0.00 42.01 2.43
2059 3606 4.268359 AGCATTGCTCTTTCTTTCCCTAG 58.732 43.478 5.03 0.00 30.62 3.02
2091 3638 2.270205 CAGAGCCCACCGAGCATT 59.730 61.111 0.00 0.00 0.00 3.56
2094 3641 2.656069 TAACCAGAGCCCACCGAGC 61.656 63.158 0.00 0.00 0.00 5.03
2127 3674 2.390938 GCTTTTTAAGTCACCGTTGCC 58.609 47.619 0.00 0.00 0.00 4.52
2188 3735 2.716217 CCTGGTTGAGGGATTTCAGTC 58.284 52.381 0.00 0.00 38.36 3.51
2239 3786 3.130516 CCACCGAGTATCTAGCAACTGAA 59.869 47.826 1.96 0.00 0.00 3.02
2265 3812 3.763897 CCCTTGATTTCCTTGGTAACCAG 59.236 47.826 0.00 0.00 33.81 4.00
2333 3880 0.816825 CCAGTCCTTGCATCCCATCG 60.817 60.000 0.00 0.00 0.00 3.84
2375 3922 7.310664 TGTCGTTGTCTATTAGGTTCTTAGTG 58.689 38.462 0.00 0.00 0.00 2.74
2383 3930 4.689345 GCAGTTTGTCGTTGTCTATTAGGT 59.311 41.667 0.00 0.00 0.00 3.08
2385 3932 5.839262 TGCAGTTTGTCGTTGTCTATTAG 57.161 39.130 0.00 0.00 0.00 1.73
2389 3936 2.286833 GCTTGCAGTTTGTCGTTGTCTA 59.713 45.455 0.00 0.00 0.00 2.59
2455 4002 8.149647 AGATGAGATGCAAATTAGAAGAGGTAG 58.850 37.037 0.00 0.00 0.00 3.18
2473 4020 9.406113 CCAGGAAAAATTAGAAAGAGATGAGAT 57.594 33.333 0.00 0.00 0.00 2.75
2493 4040 2.158325 AGCCCTTCAAAACATCCAGGAA 60.158 45.455 0.00 0.00 0.00 3.36
2505 4052 0.899717 GCCACCATCAAGCCCTTCAA 60.900 55.000 0.00 0.00 0.00 2.69
2508 4055 2.037847 GGCCACCATCAAGCCCTT 59.962 61.111 0.00 0.00 41.00 3.95
2525 4072 0.106335 TGTTTGCCCTGCCATTTGTG 59.894 50.000 0.00 0.00 0.00 3.33
2570 4117 0.039617 TTGCAACCGCTTTTGGATCG 60.040 50.000 0.00 0.00 39.64 3.69
2598 4145 3.057019 TCTTTTGTGACAATCTCGGTCG 58.943 45.455 0.00 0.00 38.10 4.79
2633 4180 0.607489 CAGCCTCCCACTTGGAACAG 60.607 60.000 0.00 0.00 44.57 3.16
2720 4267 8.754080 ACTCCATGTATAGCAATATAGAAGACC 58.246 37.037 0.00 0.00 0.00 3.85
2722 4269 8.753133 CCACTCCATGTATAGCAATATAGAAGA 58.247 37.037 0.00 0.00 0.00 2.87
2747 4294 9.089601 GAAGACTACTTACAAGATAAAAGAGCC 57.910 37.037 0.00 0.00 36.39 4.70
2779 4326 4.895668 AAGATGGACATTTGCAAACCAT 57.104 36.364 25.02 25.02 42.90 3.55
2791 4338 3.181455 ACTTGCACACAGTAAGATGGACA 60.181 43.478 0.00 0.00 41.88 4.02
2880 4427 2.088423 GGCGAACATTTGGTCACCATA 58.912 47.619 0.00 0.00 34.22 2.74
2906 4453 2.288395 CCTTTCAATCAGCGCCTGTTTT 60.288 45.455 2.29 0.00 32.61 2.43
3038 4585 4.826600 CGCTTCCTCTTGTTTGCG 57.173 55.556 0.00 0.00 37.57 4.85
3044 4591 1.301677 GGGCTCAACGCTTCCTCTTG 61.302 60.000 0.00 0.00 39.13 3.02
3055 4602 4.714308 AGCTCCTAGATATATGGGCTCAAC 59.286 45.833 0.00 0.00 0.00 3.18
3081 4628 1.389555 GCAAACCCTAGCATGTACCC 58.610 55.000 0.00 0.00 0.00 3.69
3082 4629 1.389555 GGCAAACCCTAGCATGTACC 58.610 55.000 0.00 0.00 0.00 3.34
3083 4630 1.014352 CGGCAAACCCTAGCATGTAC 58.986 55.000 0.00 0.00 0.00 2.90
3084 4631 0.746563 GCGGCAAACCCTAGCATGTA 60.747 55.000 0.00 0.00 0.00 2.29
3085 4632 2.046285 GCGGCAAACCCTAGCATGT 61.046 57.895 0.00 0.00 0.00 3.21
3086 4633 2.774799 GGCGGCAAACCCTAGCATG 61.775 63.158 3.07 0.00 0.00 4.06
3087 4634 2.440247 GGCGGCAAACCCTAGCAT 60.440 61.111 3.07 0.00 0.00 3.79
3088 4635 2.706952 AAAGGCGGCAAACCCTAGCA 62.707 55.000 13.08 0.00 0.00 3.49
3089 4636 1.934220 GAAAGGCGGCAAACCCTAGC 61.934 60.000 13.08 0.00 0.00 3.42
3090 4637 0.322546 AGAAAGGCGGCAAACCCTAG 60.323 55.000 13.08 0.00 0.00 3.02
3091 4638 0.111639 AAGAAAGGCGGCAAACCCTA 59.888 50.000 13.08 0.00 0.00 3.53
3092 4639 0.759060 AAAGAAAGGCGGCAAACCCT 60.759 50.000 13.08 0.00 0.00 4.34
3185 4735 8.534954 TGATAGCACTTTACATTAGGTCTACT 57.465 34.615 0.00 0.00 0.00 2.57
3201 4751 8.167392 ACTACCTACATCTAATCTGATAGCACT 58.833 37.037 0.00 0.00 0.00 4.40
3228 4782 6.144078 TCTAGTTGCACGATATTAAGAGCA 57.856 37.500 0.00 0.00 32.50 4.26
3232 4786 9.256477 TGGTTAATCTAGTTGCACGATATTAAG 57.744 33.333 0.00 0.00 0.00 1.85
3348 4950 8.524487 CCCTAGTGATCTAAACGCTCTTATATT 58.476 37.037 0.00 0.00 0.00 1.28
3349 4951 7.889073 TCCCTAGTGATCTAAACGCTCTTATAT 59.111 37.037 0.00 0.00 0.00 0.86
3350 4952 7.229308 TCCCTAGTGATCTAAACGCTCTTATA 58.771 38.462 0.00 0.00 0.00 0.98
3351 4953 6.069331 TCCCTAGTGATCTAAACGCTCTTAT 58.931 40.000 0.00 0.00 0.00 1.73
3352 4954 5.443283 TCCCTAGTGATCTAAACGCTCTTA 58.557 41.667 0.00 0.00 0.00 2.10
3353 4955 4.279145 TCCCTAGTGATCTAAACGCTCTT 58.721 43.478 0.00 0.00 0.00 2.85
3354 4956 3.886505 CTCCCTAGTGATCTAAACGCTCT 59.113 47.826 0.00 0.00 0.00 4.09
3355 4957 3.633065 ACTCCCTAGTGATCTAAACGCTC 59.367 47.826 0.00 0.00 33.57 5.03
3356 4958 3.633418 ACTCCCTAGTGATCTAAACGCT 58.367 45.455 0.00 0.00 33.57 5.07
3357 4959 5.708877 ATACTCCCTAGTGATCTAAACGC 57.291 43.478 0.00 0.00 36.36 4.84
3358 4960 7.393796 ACCATATACTCCCTAGTGATCTAAACG 59.606 40.741 0.00 0.00 36.36 3.60
3359 4961 8.653036 ACCATATACTCCCTAGTGATCTAAAC 57.347 38.462 0.00 0.00 36.36 2.01
3360 4962 9.976776 CTACCATATACTCCCTAGTGATCTAAA 57.023 37.037 0.00 0.00 36.36 1.85
3361 4963 9.125255 ACTACCATATACTCCCTAGTGATCTAA 57.875 37.037 0.00 0.00 36.36 2.10
3362 4964 8.697155 ACTACCATATACTCCCTAGTGATCTA 57.303 38.462 0.00 0.00 36.36 1.98
3363 4965 7.591854 ACTACCATATACTCCCTAGTGATCT 57.408 40.000 0.00 0.00 36.36 2.75
3364 4966 8.524487 CAAACTACCATATACTCCCTAGTGATC 58.476 40.741 0.00 0.00 36.36 2.92
3365 4967 8.232412 TCAAACTACCATATACTCCCTAGTGAT 58.768 37.037 0.00 0.00 36.36 3.06
3366 4968 7.589081 TCAAACTACCATATACTCCCTAGTGA 58.411 38.462 0.00 0.00 36.36 3.41
3367 4969 7.524038 GCTCAAACTACCATATACTCCCTAGTG 60.524 44.444 0.00 0.00 36.36 2.74
3368 4970 6.494146 GCTCAAACTACCATATACTCCCTAGT 59.506 42.308 0.00 0.00 39.91 2.57
3369 4971 6.493802 TGCTCAAACTACCATATACTCCCTAG 59.506 42.308 0.00 0.00 0.00 3.02
3370 4972 6.378745 TGCTCAAACTACCATATACTCCCTA 58.621 40.000 0.00 0.00 0.00 3.53
3371 4973 5.216622 TGCTCAAACTACCATATACTCCCT 58.783 41.667 0.00 0.00 0.00 4.20
3372 4974 5.546621 TGCTCAAACTACCATATACTCCC 57.453 43.478 0.00 0.00 0.00 4.30
3373 4975 6.480320 CACTTGCTCAAACTACCATATACTCC 59.520 42.308 0.00 0.00 0.00 3.85
3374 4976 7.042335 ACACTTGCTCAAACTACCATATACTC 58.958 38.462 0.00 0.00 0.00 2.59
3375 4977 6.947464 ACACTTGCTCAAACTACCATATACT 58.053 36.000 0.00 0.00 0.00 2.12
3376 4978 7.762615 TGTACACTTGCTCAAACTACCATATAC 59.237 37.037 0.00 0.00 0.00 1.47
3386 4988 3.380320 AGGGTTTGTACACTTGCTCAAAC 59.620 43.478 15.47 15.47 44.71 2.93
3538 5265 3.136763 CTGCATAGCATCCTGTAACAGG 58.863 50.000 0.00 0.00 42.63 4.00
3577 5304 4.876107 CCAAGCACTACCATTTACTACCTG 59.124 45.833 0.00 0.00 0.00 4.00
3597 5324 0.261991 TAAAACAGCACCACCCCCAA 59.738 50.000 0.00 0.00 0.00 4.12
3638 5365 9.927081 ATCCAGAACCATATTGAAGTAAGAATT 57.073 29.630 0.00 0.00 0.00 2.17
3708 5435 1.812571 CAGGTACAATGAGTTGGTGCC 59.187 52.381 0.00 0.00 39.70 5.01
3713 5440 7.132213 CAGTTAACAACAGGTACAATGAGTTG 58.868 38.462 8.61 13.66 43.71 3.16
3826 7106 6.851222 AATCATACGCAGAAATTCCTACTG 57.149 37.500 0.00 0.00 35.14 2.74
3838 7118 2.547913 TGCAAGCAAATCATACGCAG 57.452 45.000 0.00 0.00 0.00 5.18
3896 7176 7.031415 ACTGGTTTCCCATGCATATCATATA 57.969 36.000 0.00 0.00 40.90 0.86
3929 7371 3.001736 GTCAGGCAATTCGCACTATCTTC 59.998 47.826 0.00 0.00 45.17 2.87
3930 7372 2.939103 GTCAGGCAATTCGCACTATCTT 59.061 45.455 0.00 0.00 45.17 2.40
3931 7373 2.093500 TGTCAGGCAATTCGCACTATCT 60.093 45.455 0.00 0.00 45.17 1.98
3933 7375 2.401583 TGTCAGGCAATTCGCACTAT 57.598 45.000 0.00 0.00 45.17 2.12
3934 7376 2.401583 ATGTCAGGCAATTCGCACTA 57.598 45.000 0.00 0.00 45.17 2.74
3954 7408 3.951037 ACACCTGCACACTCAAATACAAA 59.049 39.130 0.00 0.00 0.00 2.83
3957 7411 3.315191 ACAACACCTGCACACTCAAATAC 59.685 43.478 0.00 0.00 0.00 1.89
3958 7412 3.314913 CACAACACCTGCACACTCAAATA 59.685 43.478 0.00 0.00 0.00 1.40
3959 7413 2.099592 CACAACACCTGCACACTCAAAT 59.900 45.455 0.00 0.00 0.00 2.32
3960 7414 1.472082 CACAACACCTGCACACTCAAA 59.528 47.619 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.