Multiple sequence alignment - TraesCS2A01G492500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G492500 chr2A 100.000 3198 0 0 1 3198 724744559 724747756 0.000000e+00 5906.0
1 TraesCS2A01G492500 chr2A 98.551 414 4 1 2396 2807 724746736 724747149 0.000000e+00 730.0
2 TraesCS2A01G492500 chr2A 98.551 414 4 1 2178 2591 724746954 724747365 0.000000e+00 730.0
3 TraesCS2A01G492500 chr2A 98.980 196 2 0 2612 2807 724746736 724746931 5.080000e-93 351.0
4 TraesCS2A01G492500 chr2A 98.980 196 2 0 2178 2373 724747170 724747365 5.080000e-93 351.0
5 TraesCS2A01G492500 chr2B 88.767 1825 112 35 599 2373 715598747 715600528 0.000000e+00 2148.0
6 TraesCS2A01G492500 chr2B 95.455 594 17 4 2612 3198 715600333 715600923 0.000000e+00 939.0
7 TraesCS2A01G492500 chr2B 91.459 281 9 6 336 606 715598442 715598717 3.900000e-99 372.0
8 TraesCS2A01G492500 chr2B 97.959 196 4 0 2396 2591 715600333 715600528 1.100000e-89 340.0
9 TraesCS2A01G492500 chr2D 87.007 1039 74 31 673 1657 590365618 590366649 0.000000e+00 1114.0
10 TraesCS2A01G492500 chr2D 95.659 622 25 2 1752 2372 590366768 590367388 0.000000e+00 998.0
11 TraesCS2A01G492500 chr2D 94.426 592 27 6 2612 3198 590367194 590367784 0.000000e+00 905.0
12 TraesCS2A01G492500 chr2D 93.280 372 14 7 243 606 590344006 590344374 3.630000e-149 538.0
13 TraesCS2A01G492500 chr2D 95.951 247 5 2 1 242 7238872 7238626 2.310000e-106 396.0
14 TraesCS2A01G492500 chr2D 98.974 195 2 0 2396 2590 590367194 590367388 1.830000e-92 350.0
15 TraesCS2A01G492500 chr2D 82.955 264 21 6 243 503 590365377 590365619 1.930000e-52 217.0
16 TraesCS2A01G492500 chr2D 89.017 173 15 3 599 768 590344447 590344618 8.990000e-51 211.0
17 TraesCS2A01G492500 chr7D 92.742 248 13 2 1 243 495335132 495335379 1.410000e-93 353.0
18 TraesCS2A01G492500 chr3B 97.917 48 1 0 2152 2199 188614945 188614992 2.040000e-12 84.2
19 TraesCS2A01G492500 chr6D 96.875 32 1 0 599 630 427614577 427614608 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G492500 chr2A 724744559 724747756 3197 False 1613.60 5906 99.0124 1 3198 5 chr2A.!!$F1 3197
1 TraesCS2A01G492500 chr2B 715598442 715600923 2481 False 949.75 2148 93.4100 336 3198 4 chr2B.!!$F1 2862
2 TraesCS2A01G492500 chr2D 590365377 590367784 2407 False 716.80 1114 91.8042 243 3198 5 chr2D.!!$F2 2955
3 TraesCS2A01G492500 chr2D 590344006 590344618 612 False 374.50 538 91.1485 243 768 2 chr2D.!!$F1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
670 769 0.032117 TAGCCAGCAGCCCTAGAGAA 60.032 55.0 0.0 0.0 45.47 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2650 2861 0.254178 CATGGGAAGTGGAGTCCTGG 59.746 60.0 11.33 0.0 35.33 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.124983 CCTGACCCAGGCGTCATG 60.125 66.667 10.28 5.45 45.13 3.07
19 20 2.665000 CTGACCCAGGCGTCATGT 59.335 61.111 10.28 0.00 41.78 3.21
20 21 1.003355 CTGACCCAGGCGTCATGTT 60.003 57.895 10.28 0.00 41.78 2.71
21 22 0.606401 CTGACCCAGGCGTCATGTTT 60.606 55.000 10.28 0.00 41.78 2.83
22 23 0.605319 TGACCCAGGCGTCATGTTTC 60.605 55.000 6.66 0.00 37.85 2.78
23 24 0.321653 GACCCAGGCGTCATGTTTCT 60.322 55.000 0.00 0.00 32.74 2.52
24 25 0.110486 ACCCAGGCGTCATGTTTCTT 59.890 50.000 0.00 0.00 0.00 2.52
25 26 1.247567 CCCAGGCGTCATGTTTCTTT 58.752 50.000 0.00 0.00 0.00 2.52
26 27 1.200020 CCCAGGCGTCATGTTTCTTTC 59.800 52.381 0.00 0.00 0.00 2.62
27 28 1.135972 CCAGGCGTCATGTTTCTTTCG 60.136 52.381 0.00 0.00 0.00 3.46
28 29 0.517316 AGGCGTCATGTTTCTTTCGC 59.483 50.000 0.00 0.00 42.32 4.70
29 30 3.001576 GCGTCATGTTTCTTTCGCC 57.998 52.632 0.00 0.00 38.16 5.54
30 31 0.517316 GCGTCATGTTTCTTTCGCCT 59.483 50.000 0.00 0.00 38.16 5.52
31 32 1.725931 GCGTCATGTTTCTTTCGCCTG 60.726 52.381 0.00 0.00 38.16 4.85
32 33 1.135972 CGTCATGTTTCTTTCGCCTGG 60.136 52.381 0.00 0.00 0.00 4.45
33 34 0.881118 TCATGTTTCTTTCGCCTGGC 59.119 50.000 9.11 9.11 0.00 4.85
34 35 0.109132 CATGTTTCTTTCGCCTGGCC 60.109 55.000 14.12 0.00 0.00 5.36
35 36 0.539438 ATGTTTCTTTCGCCTGGCCA 60.539 50.000 14.12 4.71 0.00 5.36
36 37 1.172180 TGTTTCTTTCGCCTGGCCAG 61.172 55.000 26.87 26.87 0.00 4.85
37 38 2.268076 TTTCTTTCGCCTGGCCAGC 61.268 57.895 28.39 20.70 0.00 4.85
38 39 2.697147 TTTCTTTCGCCTGGCCAGCT 62.697 55.000 28.39 0.00 0.00 4.24
39 40 3.437795 CTTTCGCCTGGCCAGCTG 61.438 66.667 28.39 20.63 0.00 4.24
52 53 3.786656 CAGCTGCCTGGCACTATAA 57.213 52.632 19.30 0.00 35.38 0.98
53 54 2.042686 CAGCTGCCTGGCACTATAAA 57.957 50.000 19.30 0.00 35.38 1.40
54 55 1.945394 CAGCTGCCTGGCACTATAAAG 59.055 52.381 19.30 7.41 35.38 1.85
55 56 1.839994 AGCTGCCTGGCACTATAAAGA 59.160 47.619 19.30 0.00 33.79 2.52
56 57 2.158842 AGCTGCCTGGCACTATAAAGAG 60.159 50.000 19.30 5.81 33.79 2.85
57 58 2.420687 GCTGCCTGGCACTATAAAGAGT 60.421 50.000 19.30 0.00 33.79 3.24
58 59 3.462021 CTGCCTGGCACTATAAAGAGTC 58.538 50.000 19.30 0.00 33.79 3.36
59 60 2.837591 TGCCTGGCACTATAAAGAGTCA 59.162 45.455 19.30 0.00 31.71 3.41
60 61 3.455910 TGCCTGGCACTATAAAGAGTCAT 59.544 43.478 19.30 0.00 31.71 3.06
61 62 3.812053 GCCTGGCACTATAAAGAGTCATG 59.188 47.826 15.17 0.00 27.19 3.07
62 63 4.684485 GCCTGGCACTATAAAGAGTCATGT 60.684 45.833 15.17 0.00 27.19 3.21
63 64 4.813161 CCTGGCACTATAAAGAGTCATGTG 59.187 45.833 0.00 0.00 27.19 3.21
64 65 4.191544 TGGCACTATAAAGAGTCATGTGC 58.808 43.478 0.00 0.00 45.62 4.57
66 67 5.401033 GCACTATAAAGAGTCATGTGCAG 57.599 43.478 9.82 0.00 45.64 4.41
67 68 4.872691 GCACTATAAAGAGTCATGTGCAGT 59.127 41.667 9.82 0.00 45.64 4.40
68 69 6.042777 GCACTATAAAGAGTCATGTGCAGTA 58.957 40.000 9.82 0.00 45.64 2.74
69 70 6.703607 GCACTATAAAGAGTCATGTGCAGTAT 59.296 38.462 9.82 0.00 45.64 2.12
70 71 7.307042 GCACTATAAAGAGTCATGTGCAGTATG 60.307 40.741 9.82 4.82 45.64 2.39
71 72 7.170489 CACTATAAAGAGTCATGTGCAGTATGG 59.830 40.741 10.14 0.00 35.86 2.74
72 73 3.988976 AAGAGTCATGTGCAGTATGGT 57.011 42.857 10.14 0.35 35.86 3.55
73 74 3.533606 AGAGTCATGTGCAGTATGGTC 57.466 47.619 10.14 7.97 35.86 4.02
74 75 2.169352 AGAGTCATGTGCAGTATGGTCC 59.831 50.000 10.14 0.00 35.86 4.46
75 76 1.908619 AGTCATGTGCAGTATGGTCCA 59.091 47.619 10.14 0.00 35.86 4.02
76 77 2.507058 AGTCATGTGCAGTATGGTCCAT 59.493 45.455 9.88 9.88 35.86 3.41
77 78 2.874701 GTCATGTGCAGTATGGTCCATC 59.125 50.000 7.92 0.34 35.86 3.51
78 79 1.869132 CATGTGCAGTATGGTCCATCG 59.131 52.381 7.92 0.00 35.86 3.84
79 80 0.901827 TGTGCAGTATGGTCCATCGT 59.098 50.000 7.92 0.00 35.86 3.73
80 81 1.277842 TGTGCAGTATGGTCCATCGTT 59.722 47.619 7.92 0.00 35.86 3.85
81 82 2.290008 TGTGCAGTATGGTCCATCGTTT 60.290 45.455 7.92 0.00 35.86 3.60
82 83 3.055747 TGTGCAGTATGGTCCATCGTTTA 60.056 43.478 7.92 0.00 35.86 2.01
83 84 3.936453 GTGCAGTATGGTCCATCGTTTAA 59.064 43.478 7.92 0.00 35.86 1.52
84 85 4.393680 GTGCAGTATGGTCCATCGTTTAAA 59.606 41.667 7.92 0.00 35.86 1.52
85 86 5.004448 TGCAGTATGGTCCATCGTTTAAAA 58.996 37.500 7.92 0.00 35.86 1.52
86 87 5.650266 TGCAGTATGGTCCATCGTTTAAAAT 59.350 36.000 7.92 0.00 35.86 1.82
87 88 6.151985 TGCAGTATGGTCCATCGTTTAAAATT 59.848 34.615 7.92 0.00 35.86 1.82
88 89 7.033185 GCAGTATGGTCCATCGTTTAAAATTT 58.967 34.615 7.92 0.00 35.86 1.82
89 90 7.220108 GCAGTATGGTCCATCGTTTAAAATTTC 59.780 37.037 7.92 0.00 35.86 2.17
90 91 8.458843 CAGTATGGTCCATCGTTTAAAATTTCT 58.541 33.333 7.92 0.00 0.00 2.52
91 92 9.020731 AGTATGGTCCATCGTTTAAAATTTCTT 57.979 29.630 7.92 0.00 0.00 2.52
92 93 9.634163 GTATGGTCCATCGTTTAAAATTTCTTT 57.366 29.630 7.92 0.00 0.00 2.52
113 114 8.514136 TCTTTAATCACTAAATGGCAAAAACG 57.486 30.769 0.00 0.00 0.00 3.60
114 115 6.698359 TTAATCACTAAATGGCAAAAACGC 57.302 33.333 0.00 0.00 0.00 4.84
122 123 2.028925 GCAAAAACGCCACCCAGG 59.971 61.111 0.00 0.00 41.84 4.45
123 124 2.733945 CAAAAACGCCACCCAGGG 59.266 61.111 2.85 2.85 38.09 4.45
124 125 1.830408 CAAAAACGCCACCCAGGGA 60.830 57.895 14.54 0.00 38.09 4.20
125 126 1.155155 AAAAACGCCACCCAGGGAT 59.845 52.632 14.54 0.00 38.09 3.85
126 127 1.184970 AAAAACGCCACCCAGGGATG 61.185 55.000 14.54 6.80 38.09 3.51
127 128 3.583882 AAACGCCACCCAGGGATGG 62.584 63.158 14.54 17.08 39.16 3.51
129 130 3.727258 CGCCACCCAGGGATGGAA 61.727 66.667 24.33 0.00 38.34 3.53
130 131 2.043953 GCCACCCAGGGATGGAAC 60.044 66.667 24.33 9.20 38.34 3.62
131 132 2.683475 CCACCCAGGGATGGAACC 59.317 66.667 14.54 0.00 38.34 3.62
132 133 2.237965 CCACCCAGGGATGGAACCA 61.238 63.158 14.54 0.00 38.34 3.67
133 134 1.773635 CACCCAGGGATGGAACCAA 59.226 57.895 14.54 0.00 0.00 3.67
134 135 0.114168 CACCCAGGGATGGAACCAAA 59.886 55.000 14.54 0.00 0.00 3.28
135 136 0.114364 ACCCAGGGATGGAACCAAAC 59.886 55.000 14.54 0.00 0.00 2.93
136 137 0.114168 CCCAGGGATGGAACCAAACA 59.886 55.000 0.00 0.00 0.00 2.83
137 138 1.273211 CCCAGGGATGGAACCAAACAT 60.273 52.381 0.00 0.00 0.00 2.71
138 139 2.024464 CCCAGGGATGGAACCAAACATA 60.024 50.000 0.00 0.00 0.00 2.29
139 140 3.023832 CCAGGGATGGAACCAAACATAC 58.976 50.000 0.00 0.00 0.00 2.39
140 141 3.563261 CCAGGGATGGAACCAAACATACA 60.563 47.826 0.00 0.00 29.25 2.29
141 142 4.280819 CAGGGATGGAACCAAACATACAT 58.719 43.478 0.00 0.00 29.25 2.29
142 143 4.098349 CAGGGATGGAACCAAACATACATG 59.902 45.833 0.00 0.00 33.98 3.21
143 144 3.181476 GGGATGGAACCAAACATACATGC 60.181 47.826 0.00 0.00 29.25 4.06
144 145 3.181476 GGATGGAACCAAACATACATGCC 60.181 47.826 0.00 0.00 0.00 4.40
145 146 2.175202 TGGAACCAAACATACATGCCC 58.825 47.619 0.00 0.00 0.00 5.36
146 147 2.175202 GGAACCAAACATACATGCCCA 58.825 47.619 0.00 0.00 0.00 5.36
147 148 2.166254 GGAACCAAACATACATGCCCAG 59.834 50.000 0.00 0.00 0.00 4.45
148 149 1.851304 ACCAAACATACATGCCCAGG 58.149 50.000 0.00 0.00 0.00 4.45
149 150 1.077005 ACCAAACATACATGCCCAGGT 59.923 47.619 0.00 0.00 0.00 4.00
150 151 2.178580 CCAAACATACATGCCCAGGTT 58.821 47.619 0.00 0.00 0.00 3.50
151 152 2.566724 CCAAACATACATGCCCAGGTTT 59.433 45.455 0.00 0.00 0.00 3.27
152 153 3.587923 CAAACATACATGCCCAGGTTTG 58.412 45.455 14.38 14.38 39.09 2.93
153 154 1.185315 ACATACATGCCCAGGTTTGC 58.815 50.000 0.00 0.00 29.44 3.68
154 155 0.461135 CATACATGCCCAGGTTTGCC 59.539 55.000 0.00 0.00 0.00 4.52
188 189 4.035102 GTCCACCACCCCAGGCTC 62.035 72.222 0.00 0.00 0.00 4.70
191 192 4.039092 CACCACCCCAGGCTCCAG 62.039 72.222 0.00 0.00 0.00 3.86
199 200 4.031129 CAGGCTCCAGGCAGCACT 62.031 66.667 11.62 5.22 41.65 4.40
200 201 3.255397 AGGCTCCAGGCAGCACTT 61.255 61.111 11.62 0.00 41.65 3.16
201 202 2.282745 GGCTCCAGGCAGCACTTT 60.283 61.111 11.62 0.00 41.65 2.66
202 203 2.338785 GGCTCCAGGCAGCACTTTC 61.339 63.158 11.62 0.00 41.65 2.62
203 204 2.338785 GCTCCAGGCAGCACTTTCC 61.339 63.158 0.00 0.00 39.43 3.13
204 205 1.377994 CTCCAGGCAGCACTTTCCT 59.622 57.895 0.00 0.00 0.00 3.36
205 206 0.676151 CTCCAGGCAGCACTTTCCTC 60.676 60.000 0.00 0.00 0.00 3.71
206 207 1.676967 CCAGGCAGCACTTTCCTCC 60.677 63.158 0.00 0.00 0.00 4.30
207 208 1.073722 CAGGCAGCACTTTCCTCCA 59.926 57.895 0.00 0.00 0.00 3.86
208 209 0.959372 CAGGCAGCACTTTCCTCCAG 60.959 60.000 0.00 0.00 0.00 3.86
209 210 1.676967 GGCAGCACTTTCCTCCAGG 60.677 63.158 0.00 0.00 0.00 4.45
210 211 2.338785 GCAGCACTTTCCTCCAGGC 61.339 63.158 0.00 0.00 34.44 4.85
211 212 1.073722 CAGCACTTTCCTCCAGGCA 59.926 57.895 0.00 0.00 34.44 4.75
212 213 1.073897 AGCACTTTCCTCCAGGCAC 59.926 57.895 0.00 0.00 34.44 5.01
213 214 1.228245 GCACTTTCCTCCAGGCACA 60.228 57.895 0.00 0.00 34.44 4.57
214 215 0.823356 GCACTTTCCTCCAGGCACAA 60.823 55.000 0.00 0.00 34.44 3.33
215 216 1.915141 CACTTTCCTCCAGGCACAAT 58.085 50.000 0.00 0.00 34.44 2.71
216 217 1.542915 CACTTTCCTCCAGGCACAATG 59.457 52.381 0.00 0.00 34.44 2.82
217 218 1.145738 ACTTTCCTCCAGGCACAATGT 59.854 47.619 0.00 0.00 34.44 2.71
218 219 1.815003 CTTTCCTCCAGGCACAATGTC 59.185 52.381 0.00 0.00 34.44 3.06
219 220 0.321564 TTCCTCCAGGCACAATGTCG 60.322 55.000 0.00 0.00 34.44 4.35
220 221 1.191489 TCCTCCAGGCACAATGTCGA 61.191 55.000 0.00 0.00 34.44 4.20
221 222 0.742281 CCTCCAGGCACAATGTCGAG 60.742 60.000 0.00 0.00 0.00 4.04
222 223 0.742281 CTCCAGGCACAATGTCGAGG 60.742 60.000 0.00 0.00 0.00 4.63
223 224 1.191489 TCCAGGCACAATGTCGAGGA 61.191 55.000 0.00 0.00 30.72 3.71
224 225 1.021390 CCAGGCACAATGTCGAGGAC 61.021 60.000 0.00 0.00 0.00 3.85
225 226 0.036952 CAGGCACAATGTCGAGGACT 60.037 55.000 0.00 0.00 33.15 3.85
226 227 0.247736 AGGCACAATGTCGAGGACTC 59.752 55.000 0.00 0.00 33.15 3.36
241 242 2.226602 GACTCGATCCAAACTAGCCC 57.773 55.000 0.00 0.00 0.00 5.19
311 312 3.436577 AGAGTTTGTCCTCCGTCTCTA 57.563 47.619 0.00 0.00 31.73 2.43
322 323 3.147553 TCCGTCTCTATGGATGGAGAG 57.852 52.381 3.12 0.00 43.69 3.20
323 324 2.711547 TCCGTCTCTATGGATGGAGAGA 59.288 50.000 3.12 0.00 43.69 3.10
334 335 0.534412 ATGGAGAGAACGCACCTCAG 59.466 55.000 0.00 0.00 33.25 3.35
339 340 0.729816 GAGAACGCACCTCAGTCGAC 60.730 60.000 7.70 7.70 0.00 4.20
513 524 1.124477 GCTCACGTCGACAAAGTTAGC 59.876 52.381 17.16 13.46 31.15 3.09
538 553 4.340950 TCTCCCAAACAAACAGGCTTTAAG 59.659 41.667 0.00 0.00 0.00 1.85
588 603 4.974368 ATCGAGTCTGAGACCAGTTAAG 57.026 45.455 9.33 0.00 41.16 1.85
593 608 5.402867 CGAGTCTGAGACCAGTTAAGAAAAC 59.597 44.000 9.33 0.00 41.16 2.43
594 609 6.487299 AGTCTGAGACCAGTTAAGAAAACT 57.513 37.500 9.33 0.00 41.16 2.66
596 611 6.763610 AGTCTGAGACCAGTTAAGAAAACTTG 59.236 38.462 9.33 0.00 41.16 3.16
606 703 8.190784 CCAGTTAAGAAAACTTGTTTGAGACAT 58.809 33.333 0.00 0.00 38.26 3.06
622 719 5.317808 TGAGACATTTATTTTGGGACGGAA 58.682 37.500 0.00 0.00 0.00 4.30
670 769 0.032117 TAGCCAGCAGCCCTAGAGAA 60.032 55.000 0.00 0.00 45.47 2.87
685 785 4.571176 CCTAGAGAACCGAATAAACAAGCC 59.429 45.833 0.00 0.00 0.00 4.35
729 830 1.062587 CCCTTAGCGCAATCAAACTCG 59.937 52.381 11.47 0.00 0.00 4.18
803 905 3.142174 CGGAGATAAGCCCCATTTTCTC 58.858 50.000 0.00 0.00 36.86 2.87
867 969 1.202734 TGCTTATCCTGATGAGCCAGC 60.203 52.381 17.94 6.02 46.22 4.85
955 1060 0.251832 TTCCGTCTCTTGCTCCCTCT 60.252 55.000 0.00 0.00 0.00 3.69
957 1062 0.967887 CCGTCTCTTGCTCCCTCTGA 60.968 60.000 0.00 0.00 0.00 3.27
962 1067 2.705658 TCTCTTGCTCCCTCTGAAAACA 59.294 45.455 0.00 0.00 0.00 2.83
984 1089 0.593518 TGTTTCCACATGCGCAAACG 60.594 50.000 17.11 8.96 44.07 3.60
997 1102 1.071605 GCAAACGCTCCAGACAGTAG 58.928 55.000 0.00 0.00 0.00 2.57
998 1103 1.714794 CAAACGCTCCAGACAGTAGG 58.285 55.000 0.00 0.00 0.00 3.18
999 1104 1.272490 CAAACGCTCCAGACAGTAGGA 59.728 52.381 0.00 0.00 0.00 2.94
1000 1105 1.629043 AACGCTCCAGACAGTAGGAA 58.371 50.000 0.00 0.00 32.57 3.36
1001 1106 1.853963 ACGCTCCAGACAGTAGGAAT 58.146 50.000 0.00 0.00 32.57 3.01
1002 1107 1.478510 ACGCTCCAGACAGTAGGAATG 59.521 52.381 0.00 0.00 32.57 2.67
1004 1109 1.474143 GCTCCAGACAGTAGGAATGCC 60.474 57.143 0.00 0.00 32.57 4.40
1005 1110 1.139853 CTCCAGACAGTAGGAATGCCC 59.860 57.143 0.00 0.00 32.57 5.36
1010 1122 2.766828 AGACAGTAGGAATGCCCAGTAC 59.233 50.000 0.00 0.00 37.41 2.73
1011 1123 2.766828 GACAGTAGGAATGCCCAGTACT 59.233 50.000 0.00 0.00 37.41 2.73
1033 1145 4.545208 TCATTTGGTGATAAGACCGACA 57.455 40.909 0.00 0.00 39.07 4.35
1038 1150 2.753452 TGGTGATAAGACCGACACTCTC 59.247 50.000 0.00 0.00 39.07 3.20
1099 1227 1.676529 TCGACGGAAGCCTATCTGAAG 59.323 52.381 0.00 0.00 0.00 3.02
1172 1317 2.223595 CCCCTCGCGTCTGCATATATAG 60.224 54.545 5.77 0.00 42.97 1.31
1181 1326 4.104831 GTCTGCATATATAGGGGGTCCTT 58.895 47.826 0.00 0.00 41.56 3.36
1182 1327 4.162509 GTCTGCATATATAGGGGGTCCTTC 59.837 50.000 0.00 0.00 41.56 3.46
1227 1377 4.079558 ACATCCCAAGAGATAACCATTGCT 60.080 41.667 0.00 0.00 0.00 3.91
1236 1386 1.289160 TAACCATTGCTCCTGCCTCT 58.711 50.000 0.00 0.00 38.71 3.69
1244 1394 1.304509 GCTCCTGCCTCTTGTTCAGC 61.305 60.000 0.00 0.00 0.00 4.26
1249 1400 1.073897 GCCTCTTGTTCAGCCCTGT 59.926 57.895 0.00 0.00 0.00 4.00
1250 1401 1.239968 GCCTCTTGTTCAGCCCTGTG 61.240 60.000 0.00 0.00 0.00 3.66
1269 1420 1.469703 TGATGGATGAAGCTTGCAACG 59.530 47.619 2.10 0.00 0.00 4.10
1314 1468 1.160137 CGTTTGGCAAGGAGAAGGAG 58.840 55.000 0.00 0.00 0.00 3.69
1325 1479 2.317594 AGGAGAAGGAGAAGATCACCCT 59.682 50.000 0.00 0.00 0.00 4.34
1387 1547 2.444624 CGTCGTCGTGCTCATTGGG 61.445 63.158 0.00 0.00 0.00 4.12
1390 1550 1.671054 CGTCGTGCTCATTGGGGTT 60.671 57.895 0.00 0.00 0.00 4.11
1411 1571 0.541863 AATCTGGGTGATGGGTCGAC 59.458 55.000 7.13 7.13 35.21 4.20
1424 1584 0.614134 GGTCGACTTACTCCCCACCT 60.614 60.000 16.46 0.00 0.00 4.00
1431 1591 3.456277 GACTTACTCCCCACCTGATGATT 59.544 47.826 0.00 0.00 0.00 2.57
1444 1604 6.051717 CACCTGATGATTATTCTTCGGAGTT 58.948 40.000 9.70 0.00 35.43 3.01
1481 1641 1.028868 GCACCTTGCATCTGGACTCC 61.029 60.000 7.74 0.00 44.26 3.85
1487 1647 2.725312 GCATCTGGACTCCGAGGCA 61.725 63.158 16.52 0.00 35.36 4.75
1493 1653 3.151022 GACTCCGAGGCAGAGGGG 61.151 72.222 0.00 0.00 35.58 4.79
1546 1711 0.749454 CTTCCTGCCAGGTACATGCC 60.749 60.000 11.27 0.00 36.53 4.40
1547 1712 1.496444 TTCCTGCCAGGTACATGCCA 61.496 55.000 11.27 0.00 36.53 4.92
1572 1737 4.732784 CACCTTGATAACGTGGAATTTGG 58.267 43.478 0.00 0.00 0.00 3.28
1577 1742 1.158434 TAACGTGGAATTTGGCCGTC 58.842 50.000 0.00 0.00 0.00 4.79
1579 1744 0.322322 ACGTGGAATTTGGCCGTCTA 59.678 50.000 0.00 0.00 0.00 2.59
1588 1753 0.693622 TTGGCCGTCTATGTTTCCCA 59.306 50.000 0.00 0.00 0.00 4.37
1599 1764 5.817816 GTCTATGTTTCCCAACCTGTATGAG 59.182 44.000 0.00 0.00 31.02 2.90
1687 1871 4.954875 ACATGCTCCTAAGTGATAGCTTC 58.045 43.478 0.00 0.00 35.95 3.86
1694 1878 5.273208 TCCTAAGTGATAGCTTCTGAGGTT 58.727 41.667 0.00 0.00 34.88 3.50
1722 1906 7.326789 CACTTTGCACAGGACAAGTATTTAATG 59.673 37.037 4.63 0.00 0.00 1.90
1923 2134 4.644103 GGAAGTCCCAATCATTCACATG 57.356 45.455 0.00 0.00 34.14 3.21
1931 2142 7.238305 AGTCCCAATCATTCACATGGATATCTA 59.762 37.037 2.05 0.00 34.82 1.98
2002 2213 3.559242 GGATGAAGACATGCAAGAGCTAC 59.441 47.826 0.00 0.00 42.90 3.58
2003 2214 2.610433 TGAAGACATGCAAGAGCTACG 58.390 47.619 0.00 0.00 42.74 3.51
2341 2552 9.513906 TGTCTGATTTTATTTTAGTCCACATGA 57.486 29.630 0.00 0.00 0.00 3.07
2352 2563 8.514330 TTTTAGTCCACATGAAAGTTAACTGT 57.486 30.769 9.34 2.64 0.00 3.55
2353 2564 9.616156 TTTTAGTCCACATGAAAGTTAACTGTA 57.384 29.630 9.34 0.00 0.00 2.74
2354 2565 9.616156 TTTAGTCCACATGAAAGTTAACTGTAA 57.384 29.630 9.34 0.00 0.00 2.41
2355 2566 9.616156 TTAGTCCACATGAAAGTTAACTGTAAA 57.384 29.630 9.34 0.00 0.00 2.01
2356 2567 8.514330 AGTCCACATGAAAGTTAACTGTAAAA 57.486 30.769 9.34 0.00 0.00 1.52
2357 2568 8.962679 AGTCCACATGAAAGTTAACTGTAAAAA 58.037 29.630 9.34 0.00 0.00 1.94
2358 2569 9.744468 GTCCACATGAAAGTTAACTGTAAAAAT 57.256 29.630 9.34 0.00 0.00 1.82
2359 2570 9.743057 TCCACATGAAAGTTAACTGTAAAAATG 57.257 29.630 9.34 8.43 0.00 2.32
2360 2571 9.743057 CCACATGAAAGTTAACTGTAAAAATGA 57.257 29.630 9.34 0.00 0.00 2.57
2373 2584 9.744468 AACTGTAAAAATGAATAAAGTGACACC 57.256 29.630 0.84 0.00 0.00 4.16
2374 2585 9.131791 ACTGTAAAAATGAATAAAGTGACACCT 57.868 29.630 0.84 0.00 0.00 4.00
2375 2586 9.398170 CTGTAAAAATGAATAAAGTGACACCTG 57.602 33.333 0.84 0.00 0.00 4.00
2376 2587 9.126151 TGTAAAAATGAATAAAGTGACACCTGA 57.874 29.630 0.84 0.00 0.00 3.86
2380 2591 9.696917 AAAATGAATAAAGTGACACCTGATTTC 57.303 29.630 0.84 1.06 0.00 2.17
2381 2592 8.641498 AATGAATAAAGTGACACCTGATTTCT 57.359 30.769 0.84 0.00 0.00 2.52
2382 2593 7.672983 TGAATAAAGTGACACCTGATTTCTC 57.327 36.000 0.84 0.00 0.00 2.87
2383 2594 7.453393 TGAATAAAGTGACACCTGATTTCTCT 58.547 34.615 0.84 0.00 0.00 3.10
2384 2595 7.939039 TGAATAAAGTGACACCTGATTTCTCTT 59.061 33.333 0.84 0.00 0.00 2.85
2385 2596 9.436957 GAATAAAGTGACACCTGATTTCTCTTA 57.563 33.333 0.84 0.00 0.00 2.10
2386 2597 9.965902 AATAAAGTGACACCTGATTTCTCTTAT 57.034 29.630 0.84 0.00 0.00 1.73
2387 2598 7.678947 AAAGTGACACCTGATTTCTCTTATG 57.321 36.000 0.84 0.00 0.00 1.90
2388 2599 6.365970 AGTGACACCTGATTTCTCTTATGT 57.634 37.500 0.84 0.00 0.00 2.29
2389 2600 6.402222 AGTGACACCTGATTTCTCTTATGTC 58.598 40.000 0.84 0.00 36.58 3.06
2390 2601 6.212388 AGTGACACCTGATTTCTCTTATGTCT 59.788 38.462 0.84 0.00 36.89 3.41
2391 2602 6.312426 GTGACACCTGATTTCTCTTATGTCTG 59.688 42.308 0.00 0.00 36.89 3.51
2392 2603 6.211384 TGACACCTGATTTCTCTTATGTCTGA 59.789 38.462 0.00 0.00 36.89 3.27
2393 2604 7.093156 TGACACCTGATTTCTCTTATGTCTGAT 60.093 37.037 0.00 0.00 36.89 2.90
2394 2605 7.628234 ACACCTGATTTCTCTTATGTCTGATT 58.372 34.615 0.00 0.00 0.00 2.57
2395 2606 7.768120 ACACCTGATTTCTCTTATGTCTGATTC 59.232 37.037 0.00 0.00 0.00 2.52
2396 2607 7.767659 CACCTGATTTCTCTTATGTCTGATTCA 59.232 37.037 0.00 0.00 0.00 2.57
2397 2608 8.324306 ACCTGATTTCTCTTATGTCTGATTCAA 58.676 33.333 0.00 0.00 0.00 2.69
2398 2609 9.170734 CCTGATTTCTCTTATGTCTGATTCAAA 57.829 33.333 0.00 0.00 0.00 2.69
2401 2612 9.448294 GATTTCTCTTATGTCTGATTCAAATGC 57.552 33.333 0.00 0.00 0.00 3.56
2402 2613 7.926674 TTCTCTTATGTCTGATTCAAATGCA 57.073 32.000 0.00 0.00 0.00 3.96
2403 2614 8.515695 TTCTCTTATGTCTGATTCAAATGCAT 57.484 30.769 0.00 0.00 0.00 3.96
2404 2615 9.617523 TTCTCTTATGTCTGATTCAAATGCATA 57.382 29.630 0.00 0.00 0.00 3.14
2405 2616 9.788889 TCTCTTATGTCTGATTCAAATGCATAT 57.211 29.630 0.00 0.00 0.00 1.78
2406 2617 9.827411 CTCTTATGTCTGATTCAAATGCATATG 57.173 33.333 0.00 0.00 0.00 1.78
2407 2618 9.563748 TCTTATGTCTGATTCAAATGCATATGA 57.436 29.630 6.97 0.00 0.00 2.15
2409 2620 9.955208 TTATGTCTGATTCAAATGCATATGAAC 57.045 29.630 6.97 0.00 38.29 3.18
2410 2621 7.634671 TGTCTGATTCAAATGCATATGAACT 57.365 32.000 6.97 0.00 38.29 3.01
2411 2622 7.700505 TGTCTGATTCAAATGCATATGAACTC 58.299 34.615 6.97 0.00 38.29 3.01
2412 2623 7.555195 TGTCTGATTCAAATGCATATGAACTCT 59.445 33.333 6.97 0.00 38.29 3.24
2413 2624 8.404000 GTCTGATTCAAATGCATATGAACTCTT 58.596 33.333 6.97 0.00 38.29 2.85
2414 2625 9.617523 TCTGATTCAAATGCATATGAACTCTTA 57.382 29.630 6.97 0.00 38.29 2.10
2420 2631 8.830580 TCAAATGCATATGAACTCTTAACTAGC 58.169 33.333 6.97 0.00 0.00 3.42
2421 2632 8.834465 CAAATGCATATGAACTCTTAACTAGCT 58.166 33.333 6.97 0.00 0.00 3.32
2423 2634 9.482627 AATGCATATGAACTCTTAACTAGCTAC 57.517 33.333 6.97 0.00 0.00 3.58
2424 2635 8.007405 TGCATATGAACTCTTAACTAGCTACA 57.993 34.615 6.97 0.00 0.00 2.74
2425 2636 8.474831 TGCATATGAACTCTTAACTAGCTACAA 58.525 33.333 6.97 0.00 0.00 2.41
2426 2637 8.756864 GCATATGAACTCTTAACTAGCTACAAC 58.243 37.037 6.97 0.00 0.00 3.32
2434 2645 9.968870 ACTCTTAACTAGCTACAACTATAATGC 57.031 33.333 0.00 0.00 0.00 3.56
2435 2646 9.413048 CTCTTAACTAGCTACAACTATAATGCC 57.587 37.037 0.00 0.00 0.00 4.40
2436 2647 8.920174 TCTTAACTAGCTACAACTATAATGCCA 58.080 33.333 0.00 0.00 0.00 4.92
2437 2648 9.197694 CTTAACTAGCTACAACTATAATGCCAG 57.802 37.037 0.00 0.00 0.00 4.85
2438 2649 6.978674 ACTAGCTACAACTATAATGCCAGA 57.021 37.500 0.00 0.00 0.00 3.86
2439 2650 7.361457 ACTAGCTACAACTATAATGCCAGAA 57.639 36.000 0.00 0.00 0.00 3.02
2440 2651 7.210873 ACTAGCTACAACTATAATGCCAGAAC 58.789 38.462 0.00 0.00 0.00 3.01
2441 2652 6.240549 AGCTACAACTATAATGCCAGAACT 57.759 37.500 0.00 0.00 0.00 3.01
2442 2653 6.284459 AGCTACAACTATAATGCCAGAACTC 58.716 40.000 0.00 0.00 0.00 3.01
2443 2654 5.467063 GCTACAACTATAATGCCAGAACTCC 59.533 44.000 0.00 0.00 0.00 3.85
2444 2655 5.435686 ACAACTATAATGCCAGAACTCCA 57.564 39.130 0.00 0.00 0.00 3.86
2445 2656 5.186198 ACAACTATAATGCCAGAACTCCAC 58.814 41.667 0.00 0.00 0.00 4.02
2446 2657 5.045578 ACAACTATAATGCCAGAACTCCACT 60.046 40.000 0.00 0.00 0.00 4.00
2447 2658 5.700402 ACTATAATGCCAGAACTCCACTT 57.300 39.130 0.00 0.00 0.00 3.16
2448 2659 5.675538 ACTATAATGCCAGAACTCCACTTC 58.324 41.667 0.00 0.00 0.00 3.01
2449 2660 2.206576 AATGCCAGAACTCCACTTCC 57.793 50.000 0.00 0.00 0.00 3.46
2450 2661 0.329596 ATGCCAGAACTCCACTTCCC 59.670 55.000 0.00 0.00 0.00 3.97
2451 2662 1.059584 TGCCAGAACTCCACTTCCCA 61.060 55.000 0.00 0.00 0.00 4.37
2452 2663 0.329596 GCCAGAACTCCACTTCCCAT 59.670 55.000 0.00 0.00 0.00 4.00
2453 2664 1.952367 GCCAGAACTCCACTTCCCATG 60.952 57.143 0.00 0.00 0.00 3.66
2454 2665 1.630369 CCAGAACTCCACTTCCCATGA 59.370 52.381 0.00 0.00 0.00 3.07
2455 2666 2.040278 CCAGAACTCCACTTCCCATGAA 59.960 50.000 0.00 0.00 0.00 2.57
2456 2667 3.077359 CAGAACTCCACTTCCCATGAAC 58.923 50.000 0.00 0.00 0.00 3.18
2457 2668 2.711009 AGAACTCCACTTCCCATGAACA 59.289 45.455 0.00 0.00 0.00 3.18
2458 2669 3.331889 AGAACTCCACTTCCCATGAACAT 59.668 43.478 0.00 0.00 0.00 2.71
2459 2670 4.536090 AGAACTCCACTTCCCATGAACATA 59.464 41.667 0.00 0.00 0.00 2.29
2460 2671 4.222124 ACTCCACTTCCCATGAACATAC 57.778 45.455 0.00 0.00 0.00 2.39
2461 2672 3.587061 ACTCCACTTCCCATGAACATACA 59.413 43.478 0.00 0.00 0.00 2.29
2462 2673 4.194640 CTCCACTTCCCATGAACATACAG 58.805 47.826 0.00 0.00 0.00 2.74
2463 2674 3.587061 TCCACTTCCCATGAACATACAGT 59.413 43.478 0.00 0.00 0.00 3.55
2464 2675 4.780554 TCCACTTCCCATGAACATACAGTA 59.219 41.667 0.00 0.00 0.00 2.74
2465 2676 4.876107 CCACTTCCCATGAACATACAGTAC 59.124 45.833 0.00 0.00 0.00 2.73
2466 2677 5.338381 CCACTTCCCATGAACATACAGTACT 60.338 44.000 0.00 0.00 0.00 2.73
2467 2678 6.173339 CACTTCCCATGAACATACAGTACTT 58.827 40.000 0.00 0.00 0.00 2.24
2468 2679 7.327975 CACTTCCCATGAACATACAGTACTTA 58.672 38.462 0.00 0.00 0.00 2.24
2469 2680 7.277981 CACTTCCCATGAACATACAGTACTTAC 59.722 40.741 0.00 0.00 0.00 2.34
2470 2681 7.180408 ACTTCCCATGAACATACAGTACTTACT 59.820 37.037 0.00 0.00 36.90 2.24
2487 2698 6.169557 ACTTACTGTACACTTTCACATGGA 57.830 37.500 0.00 0.00 0.00 3.41
2488 2699 6.588204 ACTTACTGTACACTTTCACATGGAA 58.412 36.000 0.00 0.00 0.00 3.53
2489 2700 7.051623 ACTTACTGTACACTTTCACATGGAAA 58.948 34.615 0.00 3.55 43.07 3.13
2490 2701 7.719633 ACTTACTGTACACTTTCACATGGAAAT 59.280 33.333 9.03 0.43 44.18 2.17
2491 2702 6.959639 ACTGTACACTTTCACATGGAAATT 57.040 33.333 9.03 2.95 44.18 1.82
2492 2703 6.970484 ACTGTACACTTTCACATGGAAATTC 58.030 36.000 9.03 0.00 44.18 2.17
2493 2704 6.545666 ACTGTACACTTTCACATGGAAATTCA 59.454 34.615 9.03 1.38 44.18 2.57
2494 2705 7.068103 ACTGTACACTTTCACATGGAAATTCAA 59.932 33.333 9.03 0.00 44.18 2.69
2495 2706 7.776107 TGTACACTTTCACATGGAAATTCAAA 58.224 30.769 9.03 0.00 44.18 2.69
2496 2707 7.704472 TGTACACTTTCACATGGAAATTCAAAC 59.296 33.333 9.03 6.28 44.18 2.93
2497 2708 6.877236 ACACTTTCACATGGAAATTCAAACT 58.123 32.000 9.03 0.00 44.18 2.66
2498 2709 8.006298 ACACTTTCACATGGAAATTCAAACTA 57.994 30.769 9.03 0.00 44.18 2.24
2499 2710 8.474025 ACACTTTCACATGGAAATTCAAACTAA 58.526 29.630 9.03 0.00 44.18 2.24
2500 2711 9.480053 CACTTTCACATGGAAATTCAAACTAAT 57.520 29.630 9.03 0.00 44.18 1.73
2526 2737 5.369409 TCATTCTGAGATCAGCCTGATTT 57.631 39.130 8.93 2.52 43.46 2.17
2527 2738 5.366460 TCATTCTGAGATCAGCCTGATTTC 58.634 41.667 16.24 16.24 43.46 2.17
2528 2739 5.130643 TCATTCTGAGATCAGCCTGATTTCT 59.869 40.000 21.68 11.40 43.46 2.52
2529 2740 4.669206 TCTGAGATCAGCCTGATTTCTC 57.331 45.455 21.68 18.55 43.46 2.87
2530 2741 4.288398 TCTGAGATCAGCCTGATTTCTCT 58.712 43.478 21.68 10.41 43.46 3.10
2531 2742 4.715792 TCTGAGATCAGCCTGATTTCTCTT 59.284 41.667 21.68 0.00 43.46 2.85
2532 2743 5.896106 TCTGAGATCAGCCTGATTTCTCTTA 59.104 40.000 21.68 10.06 43.46 2.10
2533 2744 6.554228 TCTGAGATCAGCCTGATTTCTCTTAT 59.446 38.462 21.68 0.00 43.46 1.73
2534 2745 6.522946 TGAGATCAGCCTGATTTCTCTTATG 58.477 40.000 21.68 0.00 38.42 1.90
2535 2746 6.099413 TGAGATCAGCCTGATTTCTCTTATGT 59.901 38.462 21.68 0.00 38.42 2.29
2536 2747 6.523840 AGATCAGCCTGATTTCTCTTATGTC 58.476 40.000 8.93 0.00 37.20 3.06
2537 2748 5.946942 TCAGCCTGATTTCTCTTATGTCT 57.053 39.130 0.00 0.00 0.00 3.41
2538 2749 5.668471 TCAGCCTGATTTCTCTTATGTCTG 58.332 41.667 0.00 0.00 0.00 3.51
2539 2750 5.423290 TCAGCCTGATTTCTCTTATGTCTGA 59.577 40.000 0.00 0.00 0.00 3.27
2540 2751 6.099413 TCAGCCTGATTTCTCTTATGTCTGAT 59.901 38.462 0.00 0.00 0.00 2.90
2541 2752 6.766944 CAGCCTGATTTCTCTTATGTCTGATT 59.233 38.462 0.00 0.00 0.00 2.57
2542 2753 7.282675 CAGCCTGATTTCTCTTATGTCTGATTT 59.717 37.037 0.00 0.00 0.00 2.17
2543 2754 7.833183 AGCCTGATTTCTCTTATGTCTGATTTT 59.167 33.333 0.00 0.00 0.00 1.82
2544 2755 9.113838 GCCTGATTTCTCTTATGTCTGATTTTA 57.886 33.333 0.00 0.00 0.00 1.52
2591 2802 9.744468 AACTGTAAAAATGAATAAAGTGACACC 57.256 29.630 0.84 0.00 0.00 4.16
2594 2805 9.126151 TGTAAAAATGAATAAAGTGACACCTGA 57.874 29.630 0.84 0.00 0.00 3.86
2598 2809 9.696917 AAAATGAATAAAGTGACACCTGATTTC 57.303 29.630 0.84 1.06 0.00 2.17
2599 2810 8.641498 AATGAATAAAGTGACACCTGATTTCT 57.359 30.769 0.84 0.00 0.00 2.52
2600 2811 7.672983 TGAATAAAGTGACACCTGATTTCTC 57.327 36.000 0.84 0.00 0.00 2.87
2601 2812 7.453393 TGAATAAAGTGACACCTGATTTCTCT 58.547 34.615 0.84 0.00 0.00 3.10
2602 2813 7.939039 TGAATAAAGTGACACCTGATTTCTCTT 59.061 33.333 0.84 0.00 0.00 2.85
2603 2814 7.678947 ATAAAGTGACACCTGATTTCTCTTG 57.321 36.000 0.84 0.00 0.00 3.02
2604 2815 4.696479 AGTGACACCTGATTTCTCTTGT 57.304 40.909 0.84 0.00 0.00 3.16
2605 2816 4.636249 AGTGACACCTGATTTCTCTTGTC 58.364 43.478 0.84 0.00 35.08 3.18
2606 2817 4.346418 AGTGACACCTGATTTCTCTTGTCT 59.654 41.667 0.84 0.00 35.45 3.41
2607 2818 4.450419 GTGACACCTGATTTCTCTTGTCTG 59.550 45.833 0.00 0.00 35.45 3.51
2608 2819 4.344968 TGACACCTGATTTCTCTTGTCTGA 59.655 41.667 0.00 0.00 35.45 3.27
2609 2820 5.012458 TGACACCTGATTTCTCTTGTCTGAT 59.988 40.000 0.00 0.00 35.45 2.90
2610 2821 5.874093 ACACCTGATTTCTCTTGTCTGATT 58.126 37.500 0.00 0.00 0.00 2.57
2611 2822 5.936956 ACACCTGATTTCTCTTGTCTGATTC 59.063 40.000 0.00 0.00 0.00 2.52
2612 2823 5.936372 CACCTGATTTCTCTTGTCTGATTCA 59.064 40.000 0.00 0.00 0.00 2.57
2613 2824 6.429078 CACCTGATTTCTCTTGTCTGATTCAA 59.571 38.462 0.00 0.00 0.00 2.69
2614 2825 7.000472 ACCTGATTTCTCTTGTCTGATTCAAA 59.000 34.615 0.00 0.00 0.00 2.69
2615 2826 7.668886 ACCTGATTTCTCTTGTCTGATTCAAAT 59.331 33.333 0.00 0.00 0.00 2.32
2616 2827 7.968956 CCTGATTTCTCTTGTCTGATTCAAATG 59.031 37.037 0.00 0.00 0.00 2.32
2617 2828 7.310664 TGATTTCTCTTGTCTGATTCAAATGC 58.689 34.615 0.00 0.00 0.00 3.56
2618 2829 6.638096 TTTCTCTTGTCTGATTCAAATGCA 57.362 33.333 0.00 0.00 0.00 3.96
2619 2830 6.829229 TTCTCTTGTCTGATTCAAATGCAT 57.171 33.333 0.00 0.00 0.00 3.96
2620 2831 7.926674 TTCTCTTGTCTGATTCAAATGCATA 57.073 32.000 0.00 0.00 0.00 3.14
2621 2832 8.515695 TTCTCTTGTCTGATTCAAATGCATAT 57.484 30.769 0.00 0.00 0.00 1.78
2622 2833 7.927048 TCTCTTGTCTGATTCAAATGCATATG 58.073 34.615 0.00 0.00 0.00 1.78
2623 2834 7.771826 TCTCTTGTCTGATTCAAATGCATATGA 59.228 33.333 6.97 0.00 0.00 2.15
2624 2835 8.283699 TCTTGTCTGATTCAAATGCATATGAA 57.716 30.769 6.97 0.00 39.66 2.57
2625 2836 8.186163 TCTTGTCTGATTCAAATGCATATGAAC 58.814 33.333 6.97 0.00 38.29 3.18
2626 2837 7.634671 TGTCTGATTCAAATGCATATGAACT 57.365 32.000 6.97 0.00 38.29 3.01
2627 2838 7.700505 TGTCTGATTCAAATGCATATGAACTC 58.299 34.615 6.97 0.00 38.29 3.01
2628 2839 7.555195 TGTCTGATTCAAATGCATATGAACTCT 59.445 33.333 6.97 0.00 38.29 3.24
2629 2840 8.404000 GTCTGATTCAAATGCATATGAACTCTT 58.596 33.333 6.97 0.00 38.29 2.85
2630 2841 9.617523 TCTGATTCAAATGCATATGAACTCTTA 57.382 29.630 6.97 0.00 38.29 2.10
2636 2847 8.830580 TCAAATGCATATGAACTCTTAACTAGC 58.169 33.333 6.97 0.00 0.00 3.42
2637 2848 8.834465 CAAATGCATATGAACTCTTAACTAGCT 58.166 33.333 6.97 0.00 0.00 3.32
2639 2850 9.482627 AATGCATATGAACTCTTAACTAGCTAC 57.517 33.333 6.97 0.00 0.00 3.58
2640 2851 8.007405 TGCATATGAACTCTTAACTAGCTACA 57.993 34.615 6.97 0.00 0.00 2.74
2641 2852 8.474831 TGCATATGAACTCTTAACTAGCTACAA 58.525 33.333 6.97 0.00 0.00 2.41
2642 2853 8.756864 GCATATGAACTCTTAACTAGCTACAAC 58.243 37.037 6.97 0.00 0.00 3.32
2650 2861 9.968870 ACTCTTAACTAGCTACAACTATAATGC 57.031 33.333 0.00 0.00 0.00 3.56
2651 2862 9.413048 CTCTTAACTAGCTACAACTATAATGCC 57.587 37.037 0.00 0.00 0.00 4.40
2652 2863 8.920174 TCTTAACTAGCTACAACTATAATGCCA 58.080 33.333 0.00 0.00 0.00 4.92
2653 2864 9.197694 CTTAACTAGCTACAACTATAATGCCAG 57.802 37.037 0.00 0.00 0.00 4.85
2654 2865 6.102897 ACTAGCTACAACTATAATGCCAGG 57.897 41.667 0.00 0.00 0.00 4.45
2655 2866 5.839063 ACTAGCTACAACTATAATGCCAGGA 59.161 40.000 0.00 0.00 0.00 3.86
2656 2867 4.962155 AGCTACAACTATAATGCCAGGAC 58.038 43.478 0.00 0.00 0.00 3.85
2657 2868 4.656112 AGCTACAACTATAATGCCAGGACT 59.344 41.667 0.00 0.00 0.00 3.85
2658 2869 4.991687 GCTACAACTATAATGCCAGGACTC 59.008 45.833 0.00 0.00 0.00 3.36
2659 2870 4.423625 ACAACTATAATGCCAGGACTCC 57.576 45.455 0.00 0.00 0.00 3.85
2660 2871 3.780294 ACAACTATAATGCCAGGACTCCA 59.220 43.478 0.00 0.00 0.00 3.86
2661 2872 4.130118 CAACTATAATGCCAGGACTCCAC 58.870 47.826 0.00 0.00 0.00 4.02
2662 2873 3.658725 ACTATAATGCCAGGACTCCACT 58.341 45.455 0.00 0.00 0.00 4.00
2663 2874 4.040755 ACTATAATGCCAGGACTCCACTT 58.959 43.478 0.00 0.00 0.00 3.16
2664 2875 3.567478 ATAATGCCAGGACTCCACTTC 57.433 47.619 0.00 0.00 0.00 3.01
2665 2876 0.329596 AATGCCAGGACTCCACTTCC 59.670 55.000 0.00 0.00 0.00 3.46
2666 2877 1.566298 ATGCCAGGACTCCACTTCCC 61.566 60.000 0.00 0.00 33.01 3.97
2667 2878 2.224159 GCCAGGACTCCACTTCCCA 61.224 63.158 0.00 0.00 33.01 4.37
2668 2879 1.566298 GCCAGGACTCCACTTCCCAT 61.566 60.000 0.00 0.00 33.01 4.00
2669 2880 0.254178 CCAGGACTCCACTTCCCATG 59.746 60.000 0.00 0.00 33.01 3.66
2670 2881 1.279496 CAGGACTCCACTTCCCATGA 58.721 55.000 0.00 0.00 33.01 3.07
2671 2882 1.630369 CAGGACTCCACTTCCCATGAA 59.370 52.381 0.00 0.00 33.01 2.57
2672 2883 1.630878 AGGACTCCACTTCCCATGAAC 59.369 52.381 0.00 0.00 33.01 3.18
2673 2884 1.351017 GGACTCCACTTCCCATGAACA 59.649 52.381 0.00 0.00 0.00 3.18
2674 2885 2.025887 GGACTCCACTTCCCATGAACAT 60.026 50.000 0.00 0.00 0.00 2.71
2675 2886 3.199946 GGACTCCACTTCCCATGAACATA 59.800 47.826 0.00 0.00 0.00 2.29
2676 2887 4.192317 GACTCCACTTCCCATGAACATAC 58.808 47.826 0.00 0.00 0.00 2.39
2677 2888 3.587061 ACTCCACTTCCCATGAACATACA 59.413 43.478 0.00 0.00 0.00 2.29
2678 2889 4.042809 ACTCCACTTCCCATGAACATACAA 59.957 41.667 0.00 0.00 0.00 2.41
2679 2890 5.191727 TCCACTTCCCATGAACATACAAT 57.808 39.130 0.00 0.00 0.00 2.71
2680 2891 6.069673 ACTCCACTTCCCATGAACATACAATA 60.070 38.462 0.00 0.00 0.00 1.90
2681 2892 6.119536 TCCACTTCCCATGAACATACAATAC 58.880 40.000 0.00 0.00 0.00 1.89
2682 2893 6.069673 TCCACTTCCCATGAACATACAATACT 60.070 38.462 0.00 0.00 0.00 2.12
2683 2894 6.603201 CCACTTCCCATGAACATACAATACTT 59.397 38.462 0.00 0.00 0.00 2.24
2684 2895 7.773224 CCACTTCCCATGAACATACAATACTTA 59.227 37.037 0.00 0.00 0.00 2.24
2685 2896 8.612619 CACTTCCCATGAACATACAATACTTAC 58.387 37.037 0.00 0.00 0.00 2.34
2686 2897 8.548877 ACTTCCCATGAACATACAATACTTACT 58.451 33.333 0.00 0.00 0.00 2.24
2687 2898 8.731275 TTCCCATGAACATACAATACTTACTG 57.269 34.615 0.00 0.00 0.00 2.74
2688 2899 7.857456 TCCCATGAACATACAATACTTACTGT 58.143 34.615 0.00 0.00 0.00 3.55
2689 2900 8.983789 TCCCATGAACATACAATACTTACTGTA 58.016 33.333 0.00 0.00 35.37 2.74
2690 2901 9.042008 CCCATGAACATACAATACTTACTGTAC 57.958 37.037 0.00 0.00 33.45 2.90
2691 2902 9.594478 CCATGAACATACAATACTTACTGTACA 57.406 33.333 0.00 0.00 33.45 2.90
2701 2912 8.988934 ACAATACTTACTGTACACTTTCACATG 58.011 33.333 0.00 0.00 33.45 3.21
2702 2913 8.443160 CAATACTTACTGTACACTTTCACATGG 58.557 37.037 0.00 0.00 33.45 3.66
2703 2914 6.169557 ACTTACTGTACACTTTCACATGGA 57.830 37.500 0.00 0.00 0.00 3.41
2704 2915 6.588204 ACTTACTGTACACTTTCACATGGAA 58.412 36.000 0.00 0.00 0.00 3.53
2705 2916 7.051623 ACTTACTGTACACTTTCACATGGAAA 58.948 34.615 0.00 3.55 43.07 3.13
2706 2917 7.719633 ACTTACTGTACACTTTCACATGGAAAT 59.280 33.333 9.03 0.43 44.18 2.17
2707 2918 6.959639 ACTGTACACTTTCACATGGAAATT 57.040 33.333 9.03 2.95 44.18 1.82
2708 2919 6.970484 ACTGTACACTTTCACATGGAAATTC 58.030 36.000 9.03 0.00 44.18 2.17
2709 2920 6.545666 ACTGTACACTTTCACATGGAAATTCA 59.454 34.615 9.03 1.38 44.18 2.57
2710 2921 7.068103 ACTGTACACTTTCACATGGAAATTCAA 59.932 33.333 9.03 0.00 44.18 2.69
2711 2922 7.776107 TGTACACTTTCACATGGAAATTCAAA 58.224 30.769 9.03 0.00 44.18 2.69
2712 2923 7.704472 TGTACACTTTCACATGGAAATTCAAAC 59.296 33.333 9.03 6.28 44.18 2.93
2713 2924 6.877236 ACACTTTCACATGGAAATTCAAACT 58.123 32.000 9.03 0.00 44.18 2.66
2714 2925 8.006298 ACACTTTCACATGGAAATTCAAACTA 57.994 30.769 9.03 0.00 44.18 2.24
2715 2926 8.474025 ACACTTTCACATGGAAATTCAAACTAA 58.526 29.630 9.03 0.00 44.18 2.24
2716 2927 9.480053 CACTTTCACATGGAAATTCAAACTAAT 57.520 29.630 9.03 0.00 44.18 1.73
2742 2953 5.369409 TCATTCTGAGATCAGCCTGATTT 57.631 39.130 8.93 2.52 43.46 2.17
2743 2954 5.366460 TCATTCTGAGATCAGCCTGATTTC 58.634 41.667 16.24 16.24 43.46 2.17
2744 2955 5.130643 TCATTCTGAGATCAGCCTGATTTCT 59.869 40.000 21.68 11.40 43.46 2.52
2745 2956 4.669206 TCTGAGATCAGCCTGATTTCTC 57.331 45.455 21.68 18.55 43.46 2.87
2746 2957 4.288398 TCTGAGATCAGCCTGATTTCTCT 58.712 43.478 21.68 10.41 43.46 3.10
2747 2958 4.715792 TCTGAGATCAGCCTGATTTCTCTT 59.284 41.667 21.68 0.00 43.46 2.85
2748 2959 5.896106 TCTGAGATCAGCCTGATTTCTCTTA 59.104 40.000 21.68 10.06 43.46 2.10
2749 2960 6.554228 TCTGAGATCAGCCTGATTTCTCTTAT 59.446 38.462 21.68 0.00 43.46 1.73
2750 2961 6.522946 TGAGATCAGCCTGATTTCTCTTATG 58.477 40.000 21.68 0.00 38.42 1.90
2751 2962 6.099413 TGAGATCAGCCTGATTTCTCTTATGT 59.901 38.462 21.68 0.00 38.42 2.29
2752 2963 6.523840 AGATCAGCCTGATTTCTCTTATGTC 58.476 40.000 8.93 0.00 37.20 3.06
2753 2964 5.946942 TCAGCCTGATTTCTCTTATGTCT 57.053 39.130 0.00 0.00 0.00 3.41
2754 2965 5.668471 TCAGCCTGATTTCTCTTATGTCTG 58.332 41.667 0.00 0.00 0.00 3.51
2755 2966 5.423290 TCAGCCTGATTTCTCTTATGTCTGA 59.577 40.000 0.00 0.00 0.00 3.27
2756 2967 6.099413 TCAGCCTGATTTCTCTTATGTCTGAT 59.901 38.462 0.00 0.00 0.00 2.90
2757 2968 6.766944 CAGCCTGATTTCTCTTATGTCTGATT 59.233 38.462 0.00 0.00 0.00 2.57
2758 2969 7.282675 CAGCCTGATTTCTCTTATGTCTGATTT 59.717 37.037 0.00 0.00 0.00 2.17
2759 2970 7.833183 AGCCTGATTTCTCTTATGTCTGATTTT 59.167 33.333 0.00 0.00 0.00 1.82
2760 2971 9.113838 GCCTGATTTCTCTTATGTCTGATTTTA 57.886 33.333 0.00 0.00 0.00 1.52
2917 3139 0.386476 ACACGACGCCACAAGTTAGA 59.614 50.000 0.00 0.00 0.00 2.10
2938 3160 9.457436 GTTAGAGGAACCATTTATTAAGGAACA 57.543 33.333 0.00 0.00 31.20 3.18
3021 3243 7.003939 TGAATGATTACGATGACATGTTCAC 57.996 36.000 0.00 0.00 36.92 3.18
3152 3374 2.484889 ACAAGCTCGTCTGGTTTTCTC 58.515 47.619 0.00 0.00 0.00 2.87
3158 3380 3.238441 CTCGTCTGGTTTTCTCTTCTCG 58.762 50.000 0.00 0.00 0.00 4.04
3173 3395 1.924731 TCTCGTCACCTCCATGAAGT 58.075 50.000 0.00 0.00 30.98 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 0.321653 AGAAACATGACGCCTGGGTC 60.322 55.000 0.00 7.35 37.45 4.46
5 6 0.110486 AAGAAACATGACGCCTGGGT 59.890 50.000 0.00 0.00 0.00 4.51
6 7 1.200020 GAAAGAAACATGACGCCTGGG 59.800 52.381 0.00 0.00 0.00 4.45
7 8 1.135972 CGAAAGAAACATGACGCCTGG 60.136 52.381 0.00 0.00 0.00 4.45
8 9 1.725931 GCGAAAGAAACATGACGCCTG 60.726 52.381 0.00 0.00 40.14 4.85
9 10 0.517316 GCGAAAGAAACATGACGCCT 59.483 50.000 0.00 0.00 40.14 5.52
10 11 3.001576 GCGAAAGAAACATGACGCC 57.998 52.632 0.00 0.00 40.14 5.68
11 12 0.517316 AGGCGAAAGAAACATGACGC 59.483 50.000 0.00 0.00 44.18 5.19
12 13 1.135972 CCAGGCGAAAGAAACATGACG 60.136 52.381 0.00 0.00 0.00 4.35
13 14 1.401539 GCCAGGCGAAAGAAACATGAC 60.402 52.381 0.00 0.00 0.00 3.06
14 15 0.881118 GCCAGGCGAAAGAAACATGA 59.119 50.000 0.00 0.00 0.00 3.07
15 16 0.109132 GGCCAGGCGAAAGAAACATG 60.109 55.000 5.00 0.00 0.00 3.21
16 17 0.539438 TGGCCAGGCGAAAGAAACAT 60.539 50.000 0.00 0.00 0.00 2.71
17 18 1.152860 TGGCCAGGCGAAAGAAACA 60.153 52.632 0.00 0.00 0.00 2.83
18 19 1.581447 CTGGCCAGGCGAAAGAAAC 59.419 57.895 26.14 0.00 0.00 2.78
19 20 2.268076 GCTGGCCAGGCGAAAGAAA 61.268 57.895 33.46 0.00 0.00 2.52
20 21 2.672996 GCTGGCCAGGCGAAAGAA 60.673 61.111 33.46 0.00 0.00 2.52
21 22 3.640407 AGCTGGCCAGGCGAAAGA 61.640 61.111 33.46 0.00 34.52 2.52
22 23 3.437795 CAGCTGGCCAGGCGAAAG 61.438 66.667 33.46 8.32 34.52 2.62
33 34 0.181114 TTATAGTGCCAGGCAGCTGG 59.819 55.000 16.83 4.73 46.83 4.85
34 35 1.945394 CTTTATAGTGCCAGGCAGCTG 59.055 52.381 16.83 10.11 40.08 4.24
35 36 1.839994 TCTTTATAGTGCCAGGCAGCT 59.160 47.619 16.83 17.22 40.08 4.24
36 37 2.216898 CTCTTTATAGTGCCAGGCAGC 58.783 52.381 16.83 10.23 40.08 5.25
37 38 3.118629 TGACTCTTTATAGTGCCAGGCAG 60.119 47.826 16.83 0.38 40.08 4.85
38 39 2.837591 TGACTCTTTATAGTGCCAGGCA 59.162 45.455 11.22 11.22 35.60 4.75
39 40 3.543680 TGACTCTTTATAGTGCCAGGC 57.456 47.619 3.66 3.66 0.00 4.85
40 41 4.813161 CACATGACTCTTTATAGTGCCAGG 59.187 45.833 0.00 0.00 0.00 4.45
41 42 4.272018 GCACATGACTCTTTATAGTGCCAG 59.728 45.833 0.00 0.00 43.54 4.85
42 43 4.191544 GCACATGACTCTTTATAGTGCCA 58.808 43.478 0.00 0.00 43.54 4.92
43 44 4.802876 GCACATGACTCTTTATAGTGCC 57.197 45.455 0.00 0.00 43.54 5.01
45 46 7.170489 CCATACTGCACATGACTCTTTATAGTG 59.830 40.741 0.00 0.00 0.00 2.74
46 47 7.147655 ACCATACTGCACATGACTCTTTATAGT 60.148 37.037 0.00 0.00 0.00 2.12
47 48 7.212976 ACCATACTGCACATGACTCTTTATAG 58.787 38.462 0.00 0.00 0.00 1.31
48 49 7.124573 ACCATACTGCACATGACTCTTTATA 57.875 36.000 0.00 0.00 0.00 0.98
49 50 5.994250 ACCATACTGCACATGACTCTTTAT 58.006 37.500 0.00 0.00 0.00 1.40
50 51 5.419542 GACCATACTGCACATGACTCTTTA 58.580 41.667 0.00 0.00 0.00 1.85
51 52 4.256920 GACCATACTGCACATGACTCTTT 58.743 43.478 0.00 0.00 0.00 2.52
52 53 3.369892 GGACCATACTGCACATGACTCTT 60.370 47.826 0.00 0.00 0.00 2.85
53 54 2.169352 GGACCATACTGCACATGACTCT 59.831 50.000 0.00 0.00 0.00 3.24
54 55 2.093500 TGGACCATACTGCACATGACTC 60.093 50.000 0.00 0.83 0.00 3.36
55 56 1.908619 TGGACCATACTGCACATGACT 59.091 47.619 0.00 0.00 0.00 3.41
56 57 2.401583 TGGACCATACTGCACATGAC 57.598 50.000 0.00 0.00 0.00 3.06
57 58 2.483538 CGATGGACCATACTGCACATGA 60.484 50.000 7.05 0.00 0.00 3.07
58 59 1.869132 CGATGGACCATACTGCACATG 59.131 52.381 7.05 0.00 0.00 3.21
59 60 1.486310 ACGATGGACCATACTGCACAT 59.514 47.619 7.05 0.00 0.00 3.21
60 61 0.901827 ACGATGGACCATACTGCACA 59.098 50.000 7.05 0.00 0.00 4.57
61 62 2.024176 AACGATGGACCATACTGCAC 57.976 50.000 7.05 0.00 0.00 4.57
62 63 2.779755 AAACGATGGACCATACTGCA 57.220 45.000 7.05 0.00 0.00 4.41
63 64 5.554822 TTTTAAACGATGGACCATACTGC 57.445 39.130 7.05 0.00 0.00 4.40
64 65 8.458843 AGAAATTTTAAACGATGGACCATACTG 58.541 33.333 7.05 3.11 0.00 2.74
65 66 8.575649 AGAAATTTTAAACGATGGACCATACT 57.424 30.769 7.05 0.00 0.00 2.12
66 67 9.634163 AAAGAAATTTTAAACGATGGACCATAC 57.366 29.630 7.05 0.45 0.00 2.39
87 88 8.973378 CGTTTTTGCCATTTAGTGATTAAAGAA 58.027 29.630 0.00 0.00 34.86 2.52
88 89 7.115663 GCGTTTTTGCCATTTAGTGATTAAAGA 59.884 33.333 0.00 0.00 34.86 2.52
89 90 7.226772 GCGTTTTTGCCATTTAGTGATTAAAG 58.773 34.615 0.00 0.00 34.86 1.85
90 91 7.111353 GCGTTTTTGCCATTTAGTGATTAAA 57.889 32.000 0.00 0.00 35.79 1.52
91 92 6.698359 GCGTTTTTGCCATTTAGTGATTAA 57.302 33.333 0.00 0.00 0.00 1.40
105 106 2.028925 CCTGGGTGGCGTTTTTGC 59.971 61.111 0.00 0.00 0.00 3.68
106 107 1.184970 ATCCCTGGGTGGCGTTTTTG 61.185 55.000 13.56 0.00 0.00 2.44
107 108 1.155155 ATCCCTGGGTGGCGTTTTT 59.845 52.632 13.56 0.00 0.00 1.94
108 109 1.606313 CATCCCTGGGTGGCGTTTT 60.606 57.895 13.56 0.00 0.00 2.43
109 110 2.035626 CATCCCTGGGTGGCGTTT 59.964 61.111 13.56 0.00 0.00 3.60
110 111 4.047125 CCATCCCTGGGTGGCGTT 62.047 66.667 13.56 0.00 39.04 4.84
112 113 3.727258 TTCCATCCCTGGGTGGCG 61.727 66.667 22.34 7.66 43.34 5.69
113 114 2.043953 GTTCCATCCCTGGGTGGC 60.044 66.667 22.34 10.94 43.34 5.01
114 115 1.799157 TTGGTTCCATCCCTGGGTGG 61.799 60.000 21.56 21.56 43.34 4.61
115 116 0.114168 TTTGGTTCCATCCCTGGGTG 59.886 55.000 13.56 10.23 43.34 4.61
116 117 0.114364 GTTTGGTTCCATCCCTGGGT 59.886 55.000 13.56 0.00 43.34 4.51
117 118 0.114168 TGTTTGGTTCCATCCCTGGG 59.886 55.000 6.33 6.33 43.34 4.45
118 119 2.236489 ATGTTTGGTTCCATCCCTGG 57.764 50.000 0.00 0.00 44.64 4.45
119 120 3.696045 TGTATGTTTGGTTCCATCCCTG 58.304 45.455 0.00 0.00 0.00 4.45
120 121 4.280819 CATGTATGTTTGGTTCCATCCCT 58.719 43.478 0.00 0.00 0.00 4.20
121 122 3.181476 GCATGTATGTTTGGTTCCATCCC 60.181 47.826 0.00 0.00 0.00 3.85
122 123 3.181476 GGCATGTATGTTTGGTTCCATCC 60.181 47.826 0.00 0.00 0.00 3.51
123 124 3.181476 GGGCATGTATGTTTGGTTCCATC 60.181 47.826 0.00 0.00 0.00 3.51
124 125 2.765699 GGGCATGTATGTTTGGTTCCAT 59.234 45.455 0.00 0.00 0.00 3.41
125 126 2.175202 GGGCATGTATGTTTGGTTCCA 58.825 47.619 0.00 0.00 0.00 3.53
126 127 2.166254 CTGGGCATGTATGTTTGGTTCC 59.834 50.000 0.00 0.00 0.00 3.62
127 128 2.166254 CCTGGGCATGTATGTTTGGTTC 59.834 50.000 0.00 0.00 0.00 3.62
128 129 2.178580 CCTGGGCATGTATGTTTGGTT 58.821 47.619 0.00 0.00 0.00 3.67
129 130 1.077005 ACCTGGGCATGTATGTTTGGT 59.923 47.619 0.00 0.00 0.00 3.67
130 131 1.851304 ACCTGGGCATGTATGTTTGG 58.149 50.000 0.00 0.00 0.00 3.28
131 132 3.587923 CAAACCTGGGCATGTATGTTTG 58.412 45.455 0.00 11.26 37.36 2.93
132 133 2.028203 GCAAACCTGGGCATGTATGTTT 60.028 45.455 0.00 0.00 0.00 2.83
133 134 1.550072 GCAAACCTGGGCATGTATGTT 59.450 47.619 0.00 0.00 0.00 2.71
134 135 1.185315 GCAAACCTGGGCATGTATGT 58.815 50.000 0.00 0.00 0.00 2.29
135 136 0.461135 GGCAAACCTGGGCATGTATG 59.539 55.000 0.00 0.00 0.00 2.39
136 137 2.900547 GGCAAACCTGGGCATGTAT 58.099 52.632 0.00 0.00 0.00 2.29
137 138 4.432601 GGCAAACCTGGGCATGTA 57.567 55.556 0.00 0.00 0.00 2.29
165 166 0.105709 CTGGGGTGGTGGACCTTTTT 60.106 55.000 0.00 0.00 45.33 1.94
166 167 1.541672 CTGGGGTGGTGGACCTTTT 59.458 57.895 0.00 0.00 45.33 2.27
167 168 2.469765 CCTGGGGTGGTGGACCTTT 61.470 63.158 0.00 0.00 45.33 3.11
168 169 2.858974 CCTGGGGTGGTGGACCTT 60.859 66.667 0.00 0.00 45.33 3.50
171 172 4.035102 GAGCCTGGGGTGGTGGAC 62.035 72.222 0.00 0.00 0.00 4.02
174 175 4.039092 CTGGAGCCTGGGGTGGTG 62.039 72.222 0.00 0.00 0.00 4.17
182 183 3.564345 AAGTGCTGCCTGGAGCCTG 62.564 63.158 8.22 0.00 42.71 4.85
183 184 2.761304 GAAAGTGCTGCCTGGAGCCT 62.761 60.000 8.22 2.41 42.71 4.58
184 185 2.282745 AAAGTGCTGCCTGGAGCC 60.283 61.111 8.22 0.10 42.71 4.70
185 186 2.338785 GGAAAGTGCTGCCTGGAGC 61.339 63.158 3.45 3.45 44.14 4.70
186 187 0.676151 GAGGAAAGTGCTGCCTGGAG 60.676 60.000 0.00 0.00 30.70 3.86
187 188 1.376466 GAGGAAAGTGCTGCCTGGA 59.624 57.895 0.00 0.00 30.70 3.86
188 189 1.676967 GGAGGAAAGTGCTGCCTGG 60.677 63.158 0.00 0.00 30.70 4.45
189 190 0.959372 CTGGAGGAAAGTGCTGCCTG 60.959 60.000 0.00 0.00 30.70 4.85
190 191 1.377994 CTGGAGGAAAGTGCTGCCT 59.622 57.895 0.00 0.00 33.97 4.75
191 192 1.676967 CCTGGAGGAAAGTGCTGCC 60.677 63.158 0.00 0.00 37.39 4.85
192 193 2.338785 GCCTGGAGGAAAGTGCTGC 61.339 63.158 0.00 0.00 37.39 5.25
193 194 1.073722 TGCCTGGAGGAAAGTGCTG 59.926 57.895 0.00 0.00 37.39 4.41
194 195 1.073897 GTGCCTGGAGGAAAGTGCT 59.926 57.895 0.00 0.00 37.39 4.40
195 196 0.823356 TTGTGCCTGGAGGAAAGTGC 60.823 55.000 0.00 0.00 37.39 4.40
196 197 1.542915 CATTGTGCCTGGAGGAAAGTG 59.457 52.381 0.00 0.00 37.39 3.16
197 198 1.145738 ACATTGTGCCTGGAGGAAAGT 59.854 47.619 0.00 0.00 37.39 2.66
198 199 1.815003 GACATTGTGCCTGGAGGAAAG 59.185 52.381 0.00 0.00 37.39 2.62
199 200 1.881925 CGACATTGTGCCTGGAGGAAA 60.882 52.381 0.00 0.00 37.39 3.13
200 201 0.321564 CGACATTGTGCCTGGAGGAA 60.322 55.000 0.00 0.00 37.39 3.36
201 202 1.191489 TCGACATTGTGCCTGGAGGA 61.191 55.000 0.00 0.00 37.39 3.71
202 203 0.742281 CTCGACATTGTGCCTGGAGG 60.742 60.000 0.00 0.00 38.53 4.30
203 204 0.742281 CCTCGACATTGTGCCTGGAG 60.742 60.000 0.00 0.00 0.00 3.86
204 205 1.191489 TCCTCGACATTGTGCCTGGA 61.191 55.000 0.00 0.00 0.00 3.86
205 206 1.021390 GTCCTCGACATTGTGCCTGG 61.021 60.000 0.00 0.00 32.09 4.45
206 207 0.036952 AGTCCTCGACATTGTGCCTG 60.037 55.000 0.00 0.00 34.60 4.85
207 208 0.247736 GAGTCCTCGACATTGTGCCT 59.752 55.000 0.00 0.00 34.60 4.75
208 209 2.755929 GAGTCCTCGACATTGTGCC 58.244 57.895 0.00 0.00 34.60 5.01
222 223 1.757699 AGGGCTAGTTTGGATCGAGTC 59.242 52.381 0.00 0.00 0.00 3.36
223 224 1.482593 CAGGGCTAGTTTGGATCGAGT 59.517 52.381 0.00 0.00 0.00 4.18
224 225 1.482593 ACAGGGCTAGTTTGGATCGAG 59.517 52.381 0.00 0.00 0.00 4.04
225 226 1.568504 ACAGGGCTAGTTTGGATCGA 58.431 50.000 0.00 0.00 0.00 3.59
226 227 3.393800 CATACAGGGCTAGTTTGGATCG 58.606 50.000 0.00 0.00 0.00 3.69
227 228 3.142174 GCATACAGGGCTAGTTTGGATC 58.858 50.000 0.00 0.00 0.00 3.36
228 229 2.485479 CGCATACAGGGCTAGTTTGGAT 60.485 50.000 0.00 0.00 0.00 3.41
229 230 1.134521 CGCATACAGGGCTAGTTTGGA 60.135 52.381 0.00 0.00 0.00 3.53
230 231 1.299541 CGCATACAGGGCTAGTTTGG 58.700 55.000 0.00 0.00 0.00 3.28
231 232 1.665679 CACGCATACAGGGCTAGTTTG 59.334 52.381 0.00 0.00 0.00 2.93
232 233 1.553248 TCACGCATACAGGGCTAGTTT 59.447 47.619 0.00 0.00 0.00 2.66
233 234 1.137086 CTCACGCATACAGGGCTAGTT 59.863 52.381 0.00 0.00 0.00 2.24
234 235 0.747255 CTCACGCATACAGGGCTAGT 59.253 55.000 0.00 0.00 0.00 2.57
235 236 1.032794 TCTCACGCATACAGGGCTAG 58.967 55.000 0.00 0.00 0.00 3.42
236 237 0.744874 GTCTCACGCATACAGGGCTA 59.255 55.000 0.00 0.00 0.00 3.93
237 238 1.257750 TGTCTCACGCATACAGGGCT 61.258 55.000 0.00 0.00 0.00 5.19
238 239 0.391130 TTGTCTCACGCATACAGGGC 60.391 55.000 0.00 0.00 0.00 5.19
239 240 2.093306 TTTGTCTCACGCATACAGGG 57.907 50.000 0.00 0.00 0.00 4.45
240 241 4.268644 CACTATTTGTCTCACGCATACAGG 59.731 45.833 0.00 0.00 0.00 4.00
241 242 4.864806 ACACTATTTGTCTCACGCATACAG 59.135 41.667 0.00 0.00 29.79 2.74
311 312 0.179000 GGTGCGTTCTCTCCATCCAT 59.821 55.000 0.00 0.00 0.00 3.41
322 323 1.733399 GGTCGACTGAGGTGCGTTC 60.733 63.158 16.46 0.00 0.00 3.95
323 324 1.816863 ATGGTCGACTGAGGTGCGTT 61.817 55.000 16.46 0.00 0.00 4.84
339 340 5.163784 GCATCATCCACAATCTATCGAATGG 60.164 44.000 0.00 0.00 0.00 3.16
513 524 2.242043 AGCCTGTTTGTTTGGGAGATG 58.758 47.619 0.00 0.00 0.00 2.90
538 553 3.758931 GGAAACGGGGTGCATGGC 61.759 66.667 0.00 0.00 0.00 4.40
593 608 7.114811 CGTCCCAAAATAAATGTCTCAAACAAG 59.885 37.037 0.00 0.00 42.37 3.16
594 609 6.920758 CGTCCCAAAATAAATGTCTCAAACAA 59.079 34.615 0.00 0.00 42.37 2.83
596 611 5.861787 CCGTCCCAAAATAAATGTCTCAAAC 59.138 40.000 0.00 0.00 0.00 2.93
670 769 3.374058 CGAGATTGGCTTGTTTATTCGGT 59.626 43.478 0.00 0.00 0.00 4.69
685 785 1.061711 GTAACTGCTGCTGCGAGATTG 59.938 52.381 17.33 5.07 43.34 2.67
729 830 1.127951 CGACATGGTGCTTTCGGTTAC 59.872 52.381 0.00 0.00 0.00 2.50
830 932 4.338379 AAGCATCTTATCTTACGGGACC 57.662 45.455 0.00 0.00 0.00 4.46
984 1089 1.474143 GGCATTCCTACTGTCTGGAGC 60.474 57.143 3.32 4.71 33.46 4.70
997 1102 3.131046 CCAAATGAAGTACTGGGCATTCC 59.869 47.826 15.19 0.00 31.16 3.01
998 1103 3.763897 ACCAAATGAAGTACTGGGCATTC 59.236 43.478 15.19 2.15 32.94 2.67
999 1104 3.511146 CACCAAATGAAGTACTGGGCATT 59.489 43.478 11.13 11.13 32.94 3.56
1000 1105 3.091545 CACCAAATGAAGTACTGGGCAT 58.908 45.455 0.00 0.00 32.94 4.40
1001 1106 2.107378 TCACCAAATGAAGTACTGGGCA 59.893 45.455 0.00 0.00 33.02 5.36
1002 1107 2.790433 TCACCAAATGAAGTACTGGGC 58.210 47.619 0.00 0.00 33.02 5.36
1004 1109 6.316390 GGTCTTATCACCAAATGAAGTACTGG 59.684 42.308 0.00 0.00 41.93 4.00
1005 1110 6.036083 CGGTCTTATCACCAAATGAAGTACTG 59.964 42.308 0.00 0.00 41.93 2.74
1010 1122 4.935205 TGTCGGTCTTATCACCAAATGAAG 59.065 41.667 0.00 0.00 41.93 3.02
1011 1123 4.693566 GTGTCGGTCTTATCACCAAATGAA 59.306 41.667 0.00 0.00 41.93 2.57
1033 1145 1.853963 ATCCTTGCCGTACAGAGAGT 58.146 50.000 0.00 0.00 0.00 3.24
1038 1150 0.753262 AGCCTATCCTTGCCGTACAG 59.247 55.000 0.00 0.00 0.00 2.74
1087 1214 0.826715 TTGCTCGCTTCAGATAGGCT 59.173 50.000 0.00 0.00 0.00 4.58
1181 1326 2.282180 GCTTGGACGGCAAAGGGA 60.282 61.111 7.71 0.00 0.00 4.20
1182 1327 2.282462 AGCTTGGACGGCAAAGGG 60.282 61.111 7.71 0.00 0.00 3.95
1227 1377 1.376466 GGCTGAACAAGAGGCAGGA 59.624 57.895 0.00 0.00 36.06 3.86
1236 1386 0.770499 TCCATCACAGGGCTGAACAA 59.230 50.000 0.00 0.00 0.00 2.83
1244 1394 2.022195 CAAGCTTCATCCATCACAGGG 58.978 52.381 0.00 0.00 0.00 4.45
1249 1400 1.469703 CGTTGCAAGCTTCATCCATCA 59.530 47.619 0.00 0.00 0.00 3.07
1250 1401 1.739466 TCGTTGCAAGCTTCATCCATC 59.261 47.619 0.00 0.00 0.00 3.51
1301 1455 3.530535 GTGATCTTCTCCTTCTCCTTGC 58.469 50.000 0.00 0.00 0.00 4.01
1387 1547 1.005924 ACCCATCACCCAGATTCAACC 59.994 52.381 0.00 0.00 33.72 3.77
1390 1550 0.541392 CGACCCATCACCCAGATTCA 59.459 55.000 0.00 0.00 33.72 2.57
1411 1571 5.832539 ATAATCATCAGGTGGGGAGTAAG 57.167 43.478 0.00 0.00 0.00 2.34
1424 1584 6.878317 AGACAACTCCGAAGAATAATCATCA 58.122 36.000 0.00 0.00 0.00 3.07
1431 1591 4.495422 GCTGAAGACAACTCCGAAGAATA 58.505 43.478 0.00 0.00 0.00 1.75
1444 1604 1.206831 CTCGACGACGCTGAAGACA 59.793 57.895 1.48 0.00 39.58 3.41
1472 1632 1.379176 CTCTGCCTCGGAGTCCAGA 60.379 63.158 18.60 18.60 32.64 3.86
1546 1711 2.355197 TCCACGTTATCAAGGTGCATG 58.645 47.619 6.28 0.00 43.81 4.06
1547 1712 2.779755 TCCACGTTATCAAGGTGCAT 57.220 45.000 6.28 0.00 43.81 3.96
1572 1737 1.092348 GGTTGGGAAACATAGACGGC 58.908 55.000 0.00 0.00 0.00 5.68
1577 1742 5.989477 TCTCATACAGGTTGGGAAACATAG 58.011 41.667 0.00 0.00 0.00 2.23
1579 1744 4.927267 TCTCATACAGGTTGGGAAACAT 57.073 40.909 0.00 0.00 0.00 2.71
1588 1753 5.891551 AGTTTTGGTGTTTCTCATACAGGTT 59.108 36.000 0.00 0.00 0.00 3.50
1599 1764 3.930229 GGGTGACAAAGTTTTGGTGTTTC 59.070 43.478 9.22 0.00 42.34 2.78
1687 1871 1.605710 CTGTGCAAAGTGGAACCTCAG 59.394 52.381 0.00 0.00 37.80 3.35
1694 1878 1.064758 ACTTGTCCTGTGCAAAGTGGA 60.065 47.619 2.51 0.00 0.00 4.02
1764 1974 2.483876 ACCGTGACATTGTGTTCTCTG 58.516 47.619 0.00 0.00 0.00 3.35
1837 2048 4.537135 TTTGTTAGAGATCGCACTCCTT 57.463 40.909 0.00 0.00 37.60 3.36
1923 2134 9.149225 CTTGAAGACATGTAGCATTAGATATCC 57.851 37.037 0.00 0.00 0.00 2.59
1931 2142 5.171339 AGGTCTTGAAGACATGTAGCATT 57.829 39.130 24.95 0.00 46.79 3.56
2002 2213 0.533531 TCATGCCTAATCCTGCTGCG 60.534 55.000 0.00 0.00 0.00 5.18
2003 2214 1.336125 GTTCATGCCTAATCCTGCTGC 59.664 52.381 0.00 0.00 0.00 5.25
2013 2224 1.220749 GACCGCTGGTTCATGCCTA 59.779 57.895 1.80 0.00 35.25 3.93
2211 2422 1.559682 GGAAGTGGAGTCCTGGCATTA 59.440 52.381 11.33 0.00 31.94 1.90
2332 2543 9.744468 ATTTTTACAGTTAACTTTCATGTGGAC 57.256 29.630 5.07 0.00 0.00 4.02
2333 2544 9.743057 CATTTTTACAGTTAACTTTCATGTGGA 57.257 29.630 5.07 0.00 0.00 4.02
2334 2545 9.743057 TCATTTTTACAGTTAACTTTCATGTGG 57.257 29.630 5.07 0.00 0.00 4.17
2347 2558 9.744468 GGTGTCACTTTATTCATTTTTACAGTT 57.256 29.630 2.35 0.00 0.00 3.16
2348 2559 9.131791 AGGTGTCACTTTATTCATTTTTACAGT 57.868 29.630 2.35 0.00 0.00 3.55
2349 2560 9.398170 CAGGTGTCACTTTATTCATTTTTACAG 57.602 33.333 2.35 0.00 0.00 2.74
2350 2561 9.126151 TCAGGTGTCACTTTATTCATTTTTACA 57.874 29.630 2.35 0.00 0.00 2.41
2354 2565 9.696917 GAAATCAGGTGTCACTTTATTCATTTT 57.303 29.630 2.35 0.00 0.00 1.82
2355 2566 9.082313 AGAAATCAGGTGTCACTTTATTCATTT 57.918 29.630 2.35 0.00 0.00 2.32
2356 2567 8.641498 AGAAATCAGGTGTCACTTTATTCATT 57.359 30.769 2.35 0.00 0.00 2.57
2357 2568 8.105829 AGAGAAATCAGGTGTCACTTTATTCAT 58.894 33.333 2.35 0.00 0.00 2.57
2358 2569 7.453393 AGAGAAATCAGGTGTCACTTTATTCA 58.547 34.615 2.35 0.00 0.00 2.57
2359 2570 7.913674 AGAGAAATCAGGTGTCACTTTATTC 57.086 36.000 2.35 0.32 0.00 1.75
2360 2571 9.965902 ATAAGAGAAATCAGGTGTCACTTTATT 57.034 29.630 2.35 0.00 0.00 1.40
2361 2572 9.388506 CATAAGAGAAATCAGGTGTCACTTTAT 57.611 33.333 2.35 0.00 0.00 1.40
2362 2573 8.375506 ACATAAGAGAAATCAGGTGTCACTTTA 58.624 33.333 2.35 0.00 0.00 1.85
2363 2574 7.227156 ACATAAGAGAAATCAGGTGTCACTTT 58.773 34.615 2.35 0.00 0.00 2.66
2364 2575 6.773638 ACATAAGAGAAATCAGGTGTCACTT 58.226 36.000 2.35 0.00 0.00 3.16
2365 2576 6.212388 AGACATAAGAGAAATCAGGTGTCACT 59.788 38.462 2.35 0.00 37.71 3.41
2366 2577 6.312426 CAGACATAAGAGAAATCAGGTGTCAC 59.688 42.308 0.00 0.00 37.71 3.67
2367 2578 6.211384 TCAGACATAAGAGAAATCAGGTGTCA 59.789 38.462 0.00 0.00 37.71 3.58
2368 2579 6.634805 TCAGACATAAGAGAAATCAGGTGTC 58.365 40.000 0.00 0.00 36.03 3.67
2369 2580 6.611613 TCAGACATAAGAGAAATCAGGTGT 57.388 37.500 0.00 0.00 0.00 4.16
2370 2581 7.767659 TGAATCAGACATAAGAGAAATCAGGTG 59.232 37.037 0.00 0.00 0.00 4.00
2371 2582 7.855375 TGAATCAGACATAAGAGAAATCAGGT 58.145 34.615 0.00 0.00 0.00 4.00
2372 2583 8.728337 TTGAATCAGACATAAGAGAAATCAGG 57.272 34.615 0.00 0.00 0.00 3.86
2375 2586 9.448294 GCATTTGAATCAGACATAAGAGAAATC 57.552 33.333 0.00 0.00 0.00 2.17
2376 2587 8.963725 TGCATTTGAATCAGACATAAGAGAAAT 58.036 29.630 0.00 0.00 0.00 2.17
2377 2588 8.339344 TGCATTTGAATCAGACATAAGAGAAA 57.661 30.769 0.00 0.00 0.00 2.52
2378 2589 7.926674 TGCATTTGAATCAGACATAAGAGAA 57.073 32.000 0.00 0.00 0.00 2.87
2379 2590 9.788889 ATATGCATTTGAATCAGACATAAGAGA 57.211 29.630 3.54 0.00 0.00 3.10
2380 2591 9.827411 CATATGCATTTGAATCAGACATAAGAG 57.173 33.333 11.29 0.00 0.00 2.85
2381 2592 9.563748 TCATATGCATTTGAATCAGACATAAGA 57.436 29.630 16.28 0.00 0.00 2.10
2383 2594 9.955208 GTTCATATGCATTTGAATCAGACATAA 57.045 29.630 27.85 6.36 34.60 1.90
2384 2595 9.346005 AGTTCATATGCATTTGAATCAGACATA 57.654 29.630 27.85 6.98 34.60 2.29
2385 2596 8.234136 AGTTCATATGCATTTGAATCAGACAT 57.766 30.769 27.85 11.18 34.60 3.06
2386 2597 7.555195 AGAGTTCATATGCATTTGAATCAGACA 59.445 33.333 27.85 8.22 34.60 3.41
2387 2598 7.928103 AGAGTTCATATGCATTTGAATCAGAC 58.072 34.615 27.85 18.56 34.60 3.51
2388 2599 8.515695 AAGAGTTCATATGCATTTGAATCAGA 57.484 30.769 27.85 9.46 34.60 3.27
2394 2605 8.830580 GCTAGTTAAGAGTTCATATGCATTTGA 58.169 33.333 14.89 14.89 0.00 2.69
2395 2606 8.834465 AGCTAGTTAAGAGTTCATATGCATTTG 58.166 33.333 3.54 7.81 0.00 2.32
2396 2607 8.970859 AGCTAGTTAAGAGTTCATATGCATTT 57.029 30.769 3.54 0.00 0.00 2.32
2397 2608 9.482627 GTAGCTAGTTAAGAGTTCATATGCATT 57.517 33.333 3.54 0.00 0.00 3.56
2398 2609 8.642432 TGTAGCTAGTTAAGAGTTCATATGCAT 58.358 33.333 3.79 3.79 0.00 3.96
2399 2610 8.007405 TGTAGCTAGTTAAGAGTTCATATGCA 57.993 34.615 0.00 0.00 0.00 3.96
2400 2611 8.756864 GTTGTAGCTAGTTAAGAGTTCATATGC 58.243 37.037 0.00 0.00 0.00 3.14
2408 2619 9.968870 GCATTATAGTTGTAGCTAGTTAAGAGT 57.031 33.333 0.00 0.00 0.00 3.24
2409 2620 9.413048 GGCATTATAGTTGTAGCTAGTTAAGAG 57.587 37.037 0.00 0.00 0.00 2.85
2410 2621 8.920174 TGGCATTATAGTTGTAGCTAGTTAAGA 58.080 33.333 0.00 0.00 0.00 2.10
2411 2622 9.197694 CTGGCATTATAGTTGTAGCTAGTTAAG 57.802 37.037 0.00 0.00 0.00 1.85
2412 2623 8.920174 TCTGGCATTATAGTTGTAGCTAGTTAA 58.080 33.333 0.00 0.00 33.18 2.01
2413 2624 8.473358 TCTGGCATTATAGTTGTAGCTAGTTA 57.527 34.615 0.00 0.00 33.18 2.24
2414 2625 7.361457 TCTGGCATTATAGTTGTAGCTAGTT 57.639 36.000 0.00 0.00 33.18 2.24
2415 2626 6.978674 TCTGGCATTATAGTTGTAGCTAGT 57.021 37.500 0.00 0.00 33.18 2.57
2416 2627 7.437748 AGTTCTGGCATTATAGTTGTAGCTAG 58.562 38.462 0.00 0.00 32.74 3.42
2417 2628 7.361457 AGTTCTGGCATTATAGTTGTAGCTA 57.639 36.000 0.00 0.00 0.00 3.32
2418 2629 6.240549 AGTTCTGGCATTATAGTTGTAGCT 57.759 37.500 0.00 0.00 0.00 3.32
2419 2630 5.467063 GGAGTTCTGGCATTATAGTTGTAGC 59.533 44.000 0.00 0.00 0.00 3.58
2420 2631 6.480320 GTGGAGTTCTGGCATTATAGTTGTAG 59.520 42.308 0.00 0.00 0.00 2.74
2421 2632 6.156256 AGTGGAGTTCTGGCATTATAGTTGTA 59.844 38.462 0.00 0.00 0.00 2.41
2422 2633 5.045578 AGTGGAGTTCTGGCATTATAGTTGT 60.046 40.000 0.00 0.00 0.00 3.32
2423 2634 5.431765 AGTGGAGTTCTGGCATTATAGTTG 58.568 41.667 0.00 0.00 0.00 3.16
2424 2635 5.700402 AGTGGAGTTCTGGCATTATAGTT 57.300 39.130 0.00 0.00 0.00 2.24
2425 2636 5.396884 GGAAGTGGAGTTCTGGCATTATAGT 60.397 44.000 0.00 0.00 0.00 2.12
2426 2637 5.059833 GGAAGTGGAGTTCTGGCATTATAG 58.940 45.833 0.00 0.00 0.00 1.31
2427 2638 4.141482 GGGAAGTGGAGTTCTGGCATTATA 60.141 45.833 0.00 0.00 0.00 0.98
2428 2639 3.372025 GGGAAGTGGAGTTCTGGCATTAT 60.372 47.826 0.00 0.00 0.00 1.28
2429 2640 2.026262 GGGAAGTGGAGTTCTGGCATTA 60.026 50.000 0.00 0.00 0.00 1.90
2430 2641 1.272147 GGGAAGTGGAGTTCTGGCATT 60.272 52.381 0.00 0.00 0.00 3.56
2431 2642 0.329596 GGGAAGTGGAGTTCTGGCAT 59.670 55.000 0.00 0.00 0.00 4.40
2432 2643 1.059584 TGGGAAGTGGAGTTCTGGCA 61.060 55.000 0.00 0.00 0.00 4.92
2433 2644 0.329596 ATGGGAAGTGGAGTTCTGGC 59.670 55.000 0.00 0.00 0.00 4.85
2434 2645 1.630369 TCATGGGAAGTGGAGTTCTGG 59.370 52.381 0.00 0.00 0.00 3.86
2435 2646 3.077359 GTTCATGGGAAGTGGAGTTCTG 58.923 50.000 0.00 0.00 32.62 3.02
2436 2647 2.711009 TGTTCATGGGAAGTGGAGTTCT 59.289 45.455 0.00 0.00 32.62 3.01
2437 2648 3.140325 TGTTCATGGGAAGTGGAGTTC 57.860 47.619 0.00 0.00 32.62 3.01
2438 2649 3.814504 ATGTTCATGGGAAGTGGAGTT 57.185 42.857 0.00 0.00 32.62 3.01
2439 2650 3.587061 TGTATGTTCATGGGAAGTGGAGT 59.413 43.478 0.00 0.00 32.62 3.85
2440 2651 4.194640 CTGTATGTTCATGGGAAGTGGAG 58.805 47.826 0.00 0.00 32.62 3.86
2441 2652 3.587061 ACTGTATGTTCATGGGAAGTGGA 59.413 43.478 0.00 0.00 32.62 4.02
2442 2653 3.955471 ACTGTATGTTCATGGGAAGTGG 58.045 45.455 0.00 0.00 32.62 4.00
2443 2654 5.734720 AGTACTGTATGTTCATGGGAAGTG 58.265 41.667 0.00 0.00 32.62 3.16
2444 2655 6.374417 AAGTACTGTATGTTCATGGGAAGT 57.626 37.500 0.00 0.00 32.62 3.01
2445 2656 7.492669 CAGTAAGTACTGTATGTTCATGGGAAG 59.507 40.741 9.86 0.00 46.51 3.46
2446 2657 7.327975 CAGTAAGTACTGTATGTTCATGGGAA 58.672 38.462 9.86 0.00 46.51 3.97
2447 2658 6.873997 CAGTAAGTACTGTATGTTCATGGGA 58.126 40.000 9.86 0.00 46.51 4.37
2463 2674 7.292713 TCCATGTGAAAGTGTACAGTAAGTA 57.707 36.000 3.00 0.00 0.00 2.24
2464 2675 6.169557 TCCATGTGAAAGTGTACAGTAAGT 57.830 37.500 3.00 0.00 0.00 2.24
2465 2676 7.490962 TTTCCATGTGAAAGTGTACAGTAAG 57.509 36.000 3.00 0.00 38.04 2.34
2466 2677 8.458573 AATTTCCATGTGAAAGTGTACAGTAA 57.541 30.769 3.00 0.00 45.74 2.24
2467 2678 7.717436 TGAATTTCCATGTGAAAGTGTACAGTA 59.283 33.333 3.00 0.00 45.74 2.74
2468 2679 6.545666 TGAATTTCCATGTGAAAGTGTACAGT 59.454 34.615 12.30 0.00 45.74 3.55
2469 2680 6.969366 TGAATTTCCATGTGAAAGTGTACAG 58.031 36.000 12.30 0.00 45.74 2.74
2470 2681 6.951062 TGAATTTCCATGTGAAAGTGTACA 57.049 33.333 12.30 0.00 45.74 2.90
2471 2682 7.920682 AGTTTGAATTTCCATGTGAAAGTGTAC 59.079 33.333 12.30 8.42 45.74 2.90
2472 2683 8.006298 AGTTTGAATTTCCATGTGAAAGTGTA 57.994 30.769 12.30 2.35 45.74 2.90
2473 2684 6.877236 AGTTTGAATTTCCATGTGAAAGTGT 58.123 32.000 12.30 3.50 45.74 3.55
2474 2685 8.870160 TTAGTTTGAATTTCCATGTGAAAGTG 57.130 30.769 12.30 0.00 45.74 3.16
2504 2715 5.130643 AGAAATCAGGCTGATCTCAGAATGA 59.869 40.000 27.66 12.74 46.59 2.57
2505 2716 5.369833 AGAAATCAGGCTGATCTCAGAATG 58.630 41.667 27.66 8.23 46.59 2.67
2506 2717 5.367352 AGAGAAATCAGGCTGATCTCAGAAT 59.633 40.000 33.40 19.51 46.59 2.40
2507 2718 4.715792 AGAGAAATCAGGCTGATCTCAGAA 59.284 41.667 33.40 10.10 46.59 3.02
2508 2719 4.288398 AGAGAAATCAGGCTGATCTCAGA 58.712 43.478 33.40 10.75 46.59 3.27
2509 2720 4.675976 AGAGAAATCAGGCTGATCTCAG 57.324 45.455 33.40 2.75 46.40 3.35
2510 2721 6.099413 ACATAAGAGAAATCAGGCTGATCTCA 59.901 38.462 33.40 22.12 35.84 3.27
2511 2722 6.523840 ACATAAGAGAAATCAGGCTGATCTC 58.476 40.000 28.69 28.69 35.76 2.75
2512 2723 6.327104 AGACATAAGAGAAATCAGGCTGATCT 59.673 38.462 28.93 23.25 35.76 2.75
2513 2724 6.424509 CAGACATAAGAGAAATCAGGCTGATC 59.575 42.308 28.93 18.97 35.76 2.92
2514 2725 6.099413 TCAGACATAAGAGAAATCAGGCTGAT 59.901 38.462 24.01 24.01 39.09 2.90
2515 2726 5.423290 TCAGACATAAGAGAAATCAGGCTGA 59.577 40.000 21.19 21.19 0.00 4.26
2516 2727 5.668471 TCAGACATAAGAGAAATCAGGCTG 58.332 41.667 8.58 8.58 0.00 4.85
2517 2728 5.946942 TCAGACATAAGAGAAATCAGGCT 57.053 39.130 0.00 0.00 0.00 4.58
2518 2729 7.565323 AAATCAGACATAAGAGAAATCAGGC 57.435 36.000 0.00 0.00 0.00 4.85
2591 2802 7.485277 GCATTTGAATCAGACAAGAGAAATCAG 59.515 37.037 0.00 0.00 0.00 2.90
2594 2805 7.223260 TGCATTTGAATCAGACAAGAGAAAT 57.777 32.000 0.00 0.00 0.00 2.17
2595 2806 6.638096 TGCATTTGAATCAGACAAGAGAAA 57.362 33.333 0.00 0.00 0.00 2.52
2596 2807 6.829229 ATGCATTTGAATCAGACAAGAGAA 57.171 33.333 0.00 0.00 0.00 2.87
2597 2808 7.771826 TCATATGCATTTGAATCAGACAAGAGA 59.228 33.333 16.28 0.00 0.00 3.10
2598 2809 7.927048 TCATATGCATTTGAATCAGACAAGAG 58.073 34.615 16.28 0.00 0.00 2.85
2599 2810 7.868906 TCATATGCATTTGAATCAGACAAGA 57.131 32.000 16.28 0.00 0.00 3.02
2600 2811 8.188799 AGTTCATATGCATTTGAATCAGACAAG 58.811 33.333 27.85 0.00 34.60 3.16
2601 2812 8.058667 AGTTCATATGCATTTGAATCAGACAA 57.941 30.769 27.85 7.59 34.60 3.18
2602 2813 7.555195 AGAGTTCATATGCATTTGAATCAGACA 59.445 33.333 27.85 8.22 34.60 3.41
2603 2814 7.928103 AGAGTTCATATGCATTTGAATCAGAC 58.072 34.615 27.85 18.56 34.60 3.51
2604 2815 8.515695 AAGAGTTCATATGCATTTGAATCAGA 57.484 30.769 27.85 9.46 34.60 3.27
2610 2821 8.830580 GCTAGTTAAGAGTTCATATGCATTTGA 58.169 33.333 14.89 14.89 0.00 2.69
2611 2822 8.834465 AGCTAGTTAAGAGTTCATATGCATTTG 58.166 33.333 3.54 7.81 0.00 2.32
2612 2823 8.970859 AGCTAGTTAAGAGTTCATATGCATTT 57.029 30.769 3.54 0.00 0.00 2.32
2613 2824 9.482627 GTAGCTAGTTAAGAGTTCATATGCATT 57.517 33.333 3.54 0.00 0.00 3.56
2614 2825 8.642432 TGTAGCTAGTTAAGAGTTCATATGCAT 58.358 33.333 3.79 3.79 0.00 3.96
2615 2826 8.007405 TGTAGCTAGTTAAGAGTTCATATGCA 57.993 34.615 0.00 0.00 0.00 3.96
2616 2827 8.756864 GTTGTAGCTAGTTAAGAGTTCATATGC 58.243 37.037 0.00 0.00 0.00 3.14
2624 2835 9.968870 GCATTATAGTTGTAGCTAGTTAAGAGT 57.031 33.333 0.00 0.00 0.00 3.24
2625 2836 9.413048 GGCATTATAGTTGTAGCTAGTTAAGAG 57.587 37.037 0.00 0.00 0.00 2.85
2626 2837 8.920174 TGGCATTATAGTTGTAGCTAGTTAAGA 58.080 33.333 0.00 0.00 0.00 2.10
2627 2838 9.197694 CTGGCATTATAGTTGTAGCTAGTTAAG 57.802 37.037 0.00 0.00 0.00 1.85
2628 2839 8.148351 CCTGGCATTATAGTTGTAGCTAGTTAA 58.852 37.037 0.00 0.00 0.00 2.01
2629 2840 7.507956 TCCTGGCATTATAGTTGTAGCTAGTTA 59.492 37.037 0.00 0.00 0.00 2.24
2630 2841 6.326583 TCCTGGCATTATAGTTGTAGCTAGTT 59.673 38.462 0.00 0.00 0.00 2.24
2631 2842 5.839063 TCCTGGCATTATAGTTGTAGCTAGT 59.161 40.000 0.00 0.00 0.00 2.57
2632 2843 6.015010 AGTCCTGGCATTATAGTTGTAGCTAG 60.015 42.308 0.00 0.00 0.00 3.42
2633 2844 5.839063 AGTCCTGGCATTATAGTTGTAGCTA 59.161 40.000 0.00 0.00 0.00 3.32
2634 2845 4.656112 AGTCCTGGCATTATAGTTGTAGCT 59.344 41.667 0.00 0.00 0.00 3.32
2635 2846 4.962155 AGTCCTGGCATTATAGTTGTAGC 58.038 43.478 0.00 0.00 0.00 3.58
2636 2847 5.070446 TGGAGTCCTGGCATTATAGTTGTAG 59.930 44.000 11.33 0.00 0.00 2.74
2637 2848 4.966168 TGGAGTCCTGGCATTATAGTTGTA 59.034 41.667 11.33 0.00 0.00 2.41
2638 2849 3.780294 TGGAGTCCTGGCATTATAGTTGT 59.220 43.478 11.33 0.00 0.00 3.32
2639 2850 4.130118 GTGGAGTCCTGGCATTATAGTTG 58.870 47.826 11.33 0.00 0.00 3.16
2640 2851 4.040755 AGTGGAGTCCTGGCATTATAGTT 58.959 43.478 11.33 0.00 0.00 2.24
2641 2852 3.658725 AGTGGAGTCCTGGCATTATAGT 58.341 45.455 11.33 0.00 0.00 2.12
2642 2853 4.503991 GGAAGTGGAGTCCTGGCATTATAG 60.504 50.000 11.33 0.00 31.94 1.31
2643 2854 3.391296 GGAAGTGGAGTCCTGGCATTATA 59.609 47.826 11.33 0.00 31.94 0.98
2644 2855 2.173569 GGAAGTGGAGTCCTGGCATTAT 59.826 50.000 11.33 0.00 31.94 1.28
2645 2856 1.559682 GGAAGTGGAGTCCTGGCATTA 59.440 52.381 11.33 0.00 31.94 1.90
2646 2857 0.329596 GGAAGTGGAGTCCTGGCATT 59.670 55.000 11.33 0.00 31.94 3.56
2647 2858 1.566298 GGGAAGTGGAGTCCTGGCAT 61.566 60.000 11.33 0.00 35.33 4.40
2648 2859 2.224159 GGGAAGTGGAGTCCTGGCA 61.224 63.158 11.33 0.00 35.33 4.92
2649 2860 1.566298 ATGGGAAGTGGAGTCCTGGC 61.566 60.000 11.33 0.75 35.33 4.85
2650 2861 0.254178 CATGGGAAGTGGAGTCCTGG 59.746 60.000 11.33 0.00 35.33 4.45
2651 2862 1.279496 TCATGGGAAGTGGAGTCCTG 58.721 55.000 11.33 0.00 35.33 3.86
2652 2863 1.630878 GTTCATGGGAAGTGGAGTCCT 59.369 52.381 11.33 0.00 35.33 3.85
2653 2864 1.351017 TGTTCATGGGAAGTGGAGTCC 59.649 52.381 0.73 0.73 32.62 3.85
2654 2865 2.859165 TGTTCATGGGAAGTGGAGTC 57.141 50.000 0.00 0.00 32.62 3.36
2655 2866 3.587061 TGTATGTTCATGGGAAGTGGAGT 59.413 43.478 0.00 0.00 32.62 3.85
2656 2867 4.220693 TGTATGTTCATGGGAAGTGGAG 57.779 45.455 0.00 0.00 32.62 3.86
2657 2868 4.649267 TTGTATGTTCATGGGAAGTGGA 57.351 40.909 0.00 0.00 32.62 4.02
2658 2869 6.122277 AGTATTGTATGTTCATGGGAAGTGG 58.878 40.000 0.00 0.00 32.62 4.00
2659 2870 7.630242 AAGTATTGTATGTTCATGGGAAGTG 57.370 36.000 0.00 0.00 32.62 3.16
2660 2871 8.548877 AGTAAGTATTGTATGTTCATGGGAAGT 58.451 33.333 0.00 0.00 32.62 3.01
2661 2872 8.830580 CAGTAAGTATTGTATGTTCATGGGAAG 58.169 37.037 0.00 0.00 32.62 3.46
2662 2873 8.325787 ACAGTAAGTATTGTATGTTCATGGGAA 58.674 33.333 0.00 0.00 0.00 3.97
2663 2874 7.857456 ACAGTAAGTATTGTATGTTCATGGGA 58.143 34.615 0.00 0.00 0.00 4.37
2664 2875 9.042008 GTACAGTAAGTATTGTATGTTCATGGG 57.958 37.037 0.00 0.00 34.67 4.00
2665 2876 9.594478 TGTACAGTAAGTATTGTATGTTCATGG 57.406 33.333 0.00 0.00 34.67 3.66
2675 2886 8.988934 CATGTGAAAGTGTACAGTAAGTATTGT 58.011 33.333 3.00 0.00 34.67 2.71
2676 2887 8.443160 CCATGTGAAAGTGTACAGTAAGTATTG 58.557 37.037 3.00 0.00 34.67 1.90
2677 2888 8.372459 TCCATGTGAAAGTGTACAGTAAGTATT 58.628 33.333 3.00 0.00 34.67 1.89
2678 2889 7.903145 TCCATGTGAAAGTGTACAGTAAGTAT 58.097 34.615 3.00 0.00 34.67 2.12
2679 2890 7.292713 TCCATGTGAAAGTGTACAGTAAGTA 57.707 36.000 3.00 0.00 0.00 2.24
2680 2891 6.169557 TCCATGTGAAAGTGTACAGTAAGT 57.830 37.500 3.00 0.00 0.00 2.24
2681 2892 7.490962 TTTCCATGTGAAAGTGTACAGTAAG 57.509 36.000 3.00 0.00 38.04 2.34
2682 2893 8.458573 AATTTCCATGTGAAAGTGTACAGTAA 57.541 30.769 3.00 0.00 45.74 2.24
2683 2894 7.717436 TGAATTTCCATGTGAAAGTGTACAGTA 59.283 33.333 3.00 0.00 45.74 2.74
2684 2895 6.545666 TGAATTTCCATGTGAAAGTGTACAGT 59.454 34.615 12.30 0.00 45.74 3.55
2685 2896 6.969366 TGAATTTCCATGTGAAAGTGTACAG 58.031 36.000 12.30 0.00 45.74 2.74
2686 2897 6.951062 TGAATTTCCATGTGAAAGTGTACA 57.049 33.333 12.30 0.00 45.74 2.90
2687 2898 7.920682 AGTTTGAATTTCCATGTGAAAGTGTAC 59.079 33.333 12.30 8.42 45.74 2.90
2688 2899 8.006298 AGTTTGAATTTCCATGTGAAAGTGTA 57.994 30.769 12.30 2.35 45.74 2.90
2689 2900 6.877236 AGTTTGAATTTCCATGTGAAAGTGT 58.123 32.000 12.30 3.50 45.74 3.55
2690 2901 8.870160 TTAGTTTGAATTTCCATGTGAAAGTG 57.130 30.769 12.30 0.00 45.74 3.16
2720 2931 5.130643 AGAAATCAGGCTGATCTCAGAATGA 59.869 40.000 27.66 12.74 46.59 2.57
2721 2932 5.369833 AGAAATCAGGCTGATCTCAGAATG 58.630 41.667 27.66 8.23 46.59 2.67
2722 2933 5.367352 AGAGAAATCAGGCTGATCTCAGAAT 59.633 40.000 33.40 19.51 46.59 2.40
2723 2934 4.715792 AGAGAAATCAGGCTGATCTCAGAA 59.284 41.667 33.40 10.10 46.59 3.02
2724 2935 4.288398 AGAGAAATCAGGCTGATCTCAGA 58.712 43.478 33.40 10.75 46.59 3.27
2725 2936 4.675976 AGAGAAATCAGGCTGATCTCAG 57.324 45.455 33.40 2.75 46.40 3.35
2726 2937 6.099413 ACATAAGAGAAATCAGGCTGATCTCA 59.901 38.462 33.40 22.12 35.84 3.27
2727 2938 6.523840 ACATAAGAGAAATCAGGCTGATCTC 58.476 40.000 28.69 28.69 35.76 2.75
2728 2939 6.327104 AGACATAAGAGAAATCAGGCTGATCT 59.673 38.462 28.93 23.25 35.76 2.75
2729 2940 6.424509 CAGACATAAGAGAAATCAGGCTGATC 59.575 42.308 28.93 18.97 35.76 2.92
2730 2941 6.099413 TCAGACATAAGAGAAATCAGGCTGAT 59.901 38.462 24.01 24.01 39.09 2.90
2731 2942 5.423290 TCAGACATAAGAGAAATCAGGCTGA 59.577 40.000 21.19 21.19 0.00 4.26
2732 2943 5.668471 TCAGACATAAGAGAAATCAGGCTG 58.332 41.667 8.58 8.58 0.00 4.85
2733 2944 5.946942 TCAGACATAAGAGAAATCAGGCT 57.053 39.130 0.00 0.00 0.00 4.58
2734 2945 7.565323 AAATCAGACATAAGAGAAATCAGGC 57.435 36.000 0.00 0.00 0.00 4.85
2784 2995 9.743057 CCAAGTGTCACTTTATTCATTTTTACA 57.257 29.630 15.73 0.00 36.03 2.41
2785 2996 9.744468 ACCAAGTGTCACTTTATTCATTTTTAC 57.256 29.630 15.73 0.00 36.03 2.01
2786 2997 9.959749 GACCAAGTGTCACTTTATTCATTTTTA 57.040 29.630 15.73 0.00 43.85 1.52
2787 2998 7.926018 GGACCAAGTGTCACTTTATTCATTTTT 59.074 33.333 15.73 0.00 46.38 1.94
2788 2999 7.069331 TGGACCAAGTGTCACTTTATTCATTTT 59.931 33.333 15.73 0.00 46.38 1.82
2789 3000 6.549364 TGGACCAAGTGTCACTTTATTCATTT 59.451 34.615 15.73 0.00 46.38 2.32
2790 3001 6.068010 TGGACCAAGTGTCACTTTATTCATT 58.932 36.000 15.73 0.00 46.38 2.57
2791 3002 5.630121 TGGACCAAGTGTCACTTTATTCAT 58.370 37.500 15.73 0.00 46.38 2.57
2792 3003 5.042463 TGGACCAAGTGTCACTTTATTCA 57.958 39.130 15.73 8.90 46.38 2.57
2793 3004 5.063880 ACTGGACCAAGTGTCACTTTATTC 58.936 41.667 15.73 11.43 46.38 1.75
2794 3005 5.048846 ACTGGACCAAGTGTCACTTTATT 57.951 39.130 15.73 3.02 46.38 1.40
2795 3006 4.102524 TGACTGGACCAAGTGTCACTTTAT 59.897 41.667 15.73 6.83 46.38 1.40
2796 3007 3.452990 TGACTGGACCAAGTGTCACTTTA 59.547 43.478 15.73 0.31 46.38 1.85
2797 3008 2.238646 TGACTGGACCAAGTGTCACTTT 59.761 45.455 15.73 2.38 46.38 2.66
2798 3009 1.837439 TGACTGGACCAAGTGTCACTT 59.163 47.619 12.62 12.62 46.38 3.16
2799 3010 1.496060 TGACTGGACCAAGTGTCACT 58.504 50.000 10.24 0.00 46.38 3.41
2801 3012 1.199615 TGTGACTGGACCAAGTGTCA 58.800 50.000 10.24 10.24 46.38 3.58
2802 3013 2.325583 TTGTGACTGGACCAAGTGTC 57.674 50.000 5.59 5.59 43.67 3.67
2803 3014 2.806745 CGATTGTGACTGGACCAAGTGT 60.807 50.000 0.00 0.00 0.00 3.55
2804 3015 1.800586 CGATTGTGACTGGACCAAGTG 59.199 52.381 0.00 0.00 0.00 3.16
2805 3016 1.270839 CCGATTGTGACTGGACCAAGT 60.271 52.381 0.00 0.00 0.00 3.16
2806 3017 1.001974 TCCGATTGTGACTGGACCAAG 59.998 52.381 0.00 0.00 0.00 3.61
2807 3018 1.052617 TCCGATTGTGACTGGACCAA 58.947 50.000 0.00 0.00 0.00 3.67
2808 3019 1.052617 TTCCGATTGTGACTGGACCA 58.947 50.000 0.00 0.00 0.00 4.02
2809 3020 2.178912 TTTCCGATTGTGACTGGACC 57.821 50.000 0.00 0.00 0.00 4.46
2819 3030 6.898041 TGTGTCTATTGAGTTTTTCCGATTG 58.102 36.000 0.00 0.00 0.00 2.67
3021 3243 0.890996 GTTGTGGCCCTTGACTCTGG 60.891 60.000 0.00 0.00 0.00 3.86
3152 3374 2.232452 ACTTCATGGAGGTGACGAGAAG 59.768 50.000 5.84 0.00 37.57 2.85
3158 3380 4.081420 ACAGATGTACTTCATGGAGGTGAC 60.081 45.833 5.84 1.07 36.83 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.