Multiple sequence alignment - TraesCS2A01G492200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G492200 chr2A 100.000 5888 0 0 1616 7503 724525145 724531032 0.000000e+00 10874.0
1 TraesCS2A01G492200 chr2A 100.000 1356 0 0 1 1356 724523530 724524885 0.000000e+00 2505.0
2 TraesCS2A01G492200 chr2A 85.616 146 20 1 7261 7405 49064439 49064584 1.300000e-32 152.0
3 TraesCS2A01G492200 chr2A 92.632 95 7 0 2222 2316 639990064 639990158 3.650000e-28 137.0
4 TraesCS2A01G492200 chr2A 82.468 154 23 4 6756 6908 745215111 745215261 1.700000e-26 132.0
5 TraesCS2A01G492200 chr2A 82.171 129 20 3 6781 6908 745219782 745219908 2.860000e-19 108.0
6 TraesCS2A01G492200 chr2A 95.652 46 2 0 4038 4083 724527527 724527572 2.900000e-09 75.0
7 TraesCS2A01G492200 chr2A 95.652 46 2 0 3998 4043 724527567 724527612 2.900000e-09 75.0
8 TraesCS2A01G492200 chr2D 96.166 2295 60 8 4341 6625 590160299 590162575 0.000000e+00 3725.0
9 TraesCS2A01G492200 chr2D 87.240 1395 71 54 4 1353 590156154 590157486 0.000000e+00 1491.0
10 TraesCS2A01G492200 chr2D 86.681 1419 64 38 2974 4318 590158844 590160211 0.000000e+00 1458.0
11 TraesCS2A01G492200 chr2D 91.181 635 36 8 6624 7242 590162619 590163249 0.000000e+00 845.0
12 TraesCS2A01G492200 chr2D 88.842 708 23 11 2302 2985 590158133 590158808 0.000000e+00 819.0
13 TraesCS2A01G492200 chr2D 87.066 317 9 5 1912 2223 590157848 590158137 5.610000e-86 329.0
14 TraesCS2A01G492200 chr2D 87.726 277 31 2 5553 5826 590161566 590161842 3.380000e-83 320.0
15 TraesCS2A01G492200 chr2D 86.935 199 17 6 1715 1904 590157596 590157794 1.640000e-51 215.0
16 TraesCS2A01G492200 chr2D 81.818 143 22 4 6767 6908 615027450 615027589 4.760000e-22 117.0
17 TraesCS2A01G492200 chr2B 96.046 1492 44 8 4341 5826 714790005 714791487 0.000000e+00 2414.0
18 TraesCS2A01G492200 chr2B 89.612 1906 127 31 5613 7494 714791211 714793069 0.000000e+00 2357.0
19 TraesCS2A01G492200 chr2B 87.473 1413 89 42 1 1356 714785756 714787137 0.000000e+00 1548.0
20 TraesCS2A01G492200 chr2B 87.377 1418 68 47 2974 4318 714788526 714789905 0.000000e+00 1524.0
21 TraesCS2A01G492200 chr2B 88.011 709 34 17 2302 2985 714787808 714788490 0.000000e+00 791.0
22 TraesCS2A01G492200 chr2B 79.060 234 30 14 1682 1898 714787219 714787450 7.850000e-30 143.0
23 TraesCS2A01G492200 chr2B 93.478 46 2 1 3998 4043 714789636 714789680 4.860000e-07 67.6
24 TraesCS2A01G492200 chr5A 88.966 145 15 1 7261 7404 492893025 492893169 2.150000e-40 178.0
25 TraesCS2A01G492200 chr5A 86.897 145 18 1 7261 7404 505768790 505768646 2.170000e-35 161.0
26 TraesCS2A01G492200 chr5A 85.806 155 12 9 7261 7410 323754501 323754650 1.010000e-33 156.0
27 TraesCS2A01G492200 chr5A 93.548 93 6 0 2218 2310 547721190 547721098 1.020000e-28 139.0
28 TraesCS2A01G492200 chr5A 91.000 100 8 1 2214 2313 673184603 673184701 4.720000e-27 134.0
29 TraesCS2A01G492200 chr7B 88.276 145 16 1 7261 7404 492490645 492490501 1.000000e-38 172.0
30 TraesCS2A01G492200 chr1D 87.671 146 18 0 7261 7406 183930141 183930286 3.600000e-38 171.0
31 TraesCS2A01G492200 chr4D 86.986 146 16 3 7261 7404 254662724 254662868 2.170000e-35 161.0
32 TraesCS2A01G492200 chrUn 85.915 142 20 0 7265 7406 119198715 119198856 1.300000e-32 152.0
33 TraesCS2A01G492200 chr4A 96.591 88 3 0 2220 2307 680395038 680395125 6.070000e-31 147.0
34 TraesCS2A01G492200 chr4A 96.552 87 3 0 2221 2307 590257773 590257859 2.180000e-30 145.0
35 TraesCS2A01G492200 chr3D 85.135 148 17 4 7261 7406 479605613 479605757 6.070000e-31 147.0
36 TraesCS2A01G492200 chr3D 84.722 72 10 1 6836 6906 586109349 586109420 3.760000e-08 71.3
37 TraesCS2A01G492200 chr6D 94.565 92 4 1 2215 2306 443958514 443958604 2.820000e-29 141.0
38 TraesCS2A01G492200 chr6A 95.402 87 4 0 2220 2306 115288131 115288045 1.020000e-28 139.0
39 TraesCS2A01G492200 chr3A 92.708 96 6 1 2222 2316 711064829 711064924 3.650000e-28 137.0
40 TraesCS2A01G492200 chr1A 93.478 92 6 0 2221 2312 540345820 540345729 3.650000e-28 137.0
41 TraesCS2A01G492200 chr4B 80.519 154 28 2 6756 6908 652289790 652289942 4.760000e-22 117.0
42 TraesCS2A01G492200 chr7D 78.261 161 29 6 6751 6909 238976282 238976438 1.720000e-16 99.0
43 TraesCS2A01G492200 chr7A 77.500 160 32 4 6751 6909 254391660 254391816 8.020000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G492200 chr2A 724523530 724531032 7502 False 3382.250000 10874 97.826000 1 7503 4 chr2A.!!$F5 7502
1 TraesCS2A01G492200 chr2D 590156154 590163249 7095 False 1150.250000 3725 88.979625 4 7242 8 chr2D.!!$F2 7238
2 TraesCS2A01G492200 chr2B 714785756 714793069 7313 False 1263.514286 2414 88.722429 1 7494 7 chr2B.!!$F1 7493

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
149 153 0.026803 GTGCGCTTTTCATAGAGCCG 59.973 55.000 9.73 0.00 39.80 5.52 F
766 812 0.035458 CTTGGGACGGGATGATAGGC 59.965 60.000 0.00 0.00 0.00 3.93 F
1650 1728 0.039074 CGGATTCGCGCTAGAGGATT 60.039 55.000 5.56 0.00 0.00 3.01 F
1865 1970 0.109342 AATGAGGGCAGCGGAATAGG 59.891 55.000 0.00 0.00 0.00 2.57 F
1904 2010 1.135915 TGTGCAAACGTGGCAGAATTT 59.864 42.857 14.66 0.00 42.85 1.82 F
1906 2012 1.139163 GCAAACGTGGCAGAATTTGG 58.861 50.000 15.75 3.28 33.55 3.28 F
1907 2013 1.269517 GCAAACGTGGCAGAATTTGGA 60.270 47.619 15.75 0.00 33.55 3.53 F
2599 2761 1.389609 GCTGCTGCCCTTGTATGCAT 61.390 55.000 3.79 3.79 36.79 3.96 F
4299 4623 1.053424 AGTTGTACGCCTTCTTCCCA 58.947 50.000 0.00 0.00 0.00 4.37 F
5746 6215 0.100682 CACCTATGAGTCGTCCACCG 59.899 60.000 0.00 0.00 38.13 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1070 1127 0.624795 GATTTGGAGGGGAGAGGGGT 60.625 60.00 0.00 0.0 0.00 4.95 R
2581 2743 0.384309 CATGCATACAAGGGCAGCAG 59.616 55.00 0.00 0.0 44.24 4.24 R
2584 2746 0.818938 TTGCATGCATACAAGGGCAG 59.181 50.00 23.37 0.0 44.24 4.85 R
2888 3090 1.542492 ATATGCAGCTGGGCTATTGC 58.458 50.00 17.12 0.0 36.40 3.56 R
3716 4036 1.569479 GCAGGACAACCGCTTGAGAC 61.569 60.00 0.00 0.0 41.83 3.36 R
3776 4096 5.449553 AGGAGATTTTGACAACAGGTTCTT 58.550 37.50 0.00 0.0 0.00 2.52 R
3786 4106 9.762933 CCAAGAAATTTAAAGGAGATTTTGACA 57.237 29.63 0.00 0.0 32.01 3.58 R
4556 4957 1.587547 GAATCATCTGAACTCGGGCC 58.412 55.00 0.00 0.0 0.00 5.80 R
5759 6228 0.034059 CCCGGTGGATGACTCATAGC 59.966 60.00 0.00 0.0 0.00 2.97 R
7411 7973 0.179000 GACCCATGCAAGACCGAGAT 59.821 55.00 0.00 0.0 0.00 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 2.690778 GCTTCCCGTGCCATGTCAC 61.691 63.158 0.00 0.00 0.00 3.67
83 84 2.585869 AAGTTGCAGCGACGTGACG 61.586 57.895 2.24 2.24 0.00 4.35
149 153 0.026803 GTGCGCTTTTCATAGAGCCG 59.973 55.000 9.73 0.00 39.80 5.52
162 172 4.400961 AGCCGGCTGGAAGTGCTC 62.401 66.667 32.33 0.00 37.49 4.26
174 184 2.028658 GGAAGTGCTCTGATCAGTGTCA 60.029 50.000 21.92 17.24 0.00 3.58
195 205 3.730761 CTGCGTGGTTGAGCCTGC 61.731 66.667 0.00 0.00 38.97 4.85
218 228 4.110493 GGGCACTAGTAGCGCTTG 57.890 61.111 18.68 8.78 41.20 4.01
250 260 1.858091 ATCCTGTATCGCAGCTTTCG 58.142 50.000 0.00 0.00 43.71 3.46
303 321 4.104102 ACAGGATTGTGGTTTCTTCAGGTA 59.896 41.667 0.00 0.00 35.83 3.08
314 332 5.875359 GGTTTCTTCAGGTAGAGGTTACATG 59.125 44.000 0.00 0.00 0.00 3.21
315 333 6.465084 GTTTCTTCAGGTAGAGGTTACATGT 58.535 40.000 2.69 2.69 31.91 3.21
317 335 7.406031 TTCTTCAGGTAGAGGTTACATGTAG 57.594 40.000 5.56 0.48 31.91 2.74
318 336 5.360144 TCTTCAGGTAGAGGTTACATGTAGC 59.640 44.000 10.99 10.99 30.44 3.58
319 337 3.958798 TCAGGTAGAGGTTACATGTAGCC 59.041 47.826 26.52 26.52 36.78 3.93
320 338 3.704566 CAGGTAGAGGTTACATGTAGCCA 59.295 47.826 32.53 15.40 38.69 4.75
343 361 2.726821 CCACGTAGGGTTACCTCTGTA 58.273 52.381 0.00 0.00 46.95 2.74
370 388 3.983344 GCAAAGCATTCGAAAGTTGATGT 59.017 39.130 0.00 0.00 0.00 3.06
417 436 8.385898 TGGGATATAAAGTAAAATAAGGCACG 57.614 34.615 0.00 0.00 0.00 5.34
547 586 1.228245 GCAGCAGGTCCCTGTCAAA 60.228 57.895 14.56 0.00 45.24 2.69
549 588 0.607489 CAGCAGGTCCCTGTCAAAGG 60.607 60.000 14.56 0.00 46.94 3.11
623 669 2.730672 CTGTCAAGCAGCCGTACGC 61.731 63.158 10.49 5.63 38.52 4.42
660 706 7.109501 TGCTCAATCTGCTAACCAACTTTATA 58.890 34.615 0.00 0.00 0.00 0.98
713 759 3.637911 ATTGCATGACCTACCGGTTAA 57.362 42.857 15.04 0.00 45.73 2.01
722 768 3.631250 ACCTACCGGTTAAGGATCGTAA 58.369 45.455 26.98 0.00 42.13 3.18
723 769 3.633986 ACCTACCGGTTAAGGATCGTAAG 59.366 47.826 26.98 7.93 42.13 2.34
726 772 1.539712 CCGGTTAAGGATCGTAAGGGC 60.540 57.143 0.00 0.00 38.47 5.19
727 773 1.137479 CGGTTAAGGATCGTAAGGGCA 59.863 52.381 0.00 0.00 38.47 5.36
728 774 2.419021 CGGTTAAGGATCGTAAGGGCAA 60.419 50.000 0.00 0.00 38.47 4.52
753 799 3.547746 GATTACGTATTTGCCCTTGGGA 58.452 45.455 10.36 0.00 0.00 4.37
758 804 1.208844 TATTTGCCCTTGGGACGGGA 61.209 55.000 10.36 0.00 44.90 5.14
766 812 0.035458 CTTGGGACGGGATGATAGGC 59.965 60.000 0.00 0.00 0.00 3.93
775 821 1.294780 GATGATAGGCGGAGGGCAG 59.705 63.158 0.00 0.00 46.16 4.85
797 843 0.609681 TGGTAAATTCACACCGGGCC 60.610 55.000 6.32 0.00 37.66 5.80
828 874 0.543277 GGGGTCGGGTTAGGTTTAGG 59.457 60.000 0.00 0.00 0.00 2.69
831 877 2.837591 GGGTCGGGTTAGGTTTAGGTTA 59.162 50.000 0.00 0.00 0.00 2.85
832 878 3.118629 GGGTCGGGTTAGGTTTAGGTTAG 60.119 52.174 0.00 0.00 0.00 2.34
833 879 3.118629 GGTCGGGTTAGGTTTAGGTTAGG 60.119 52.174 0.00 0.00 0.00 2.69
834 880 3.106827 TCGGGTTAGGTTTAGGTTAGGG 58.893 50.000 0.00 0.00 0.00 3.53
835 881 2.420547 CGGGTTAGGTTTAGGTTAGGGC 60.421 54.545 0.00 0.00 0.00 5.19
836 882 2.848694 GGGTTAGGTTTAGGTTAGGGCT 59.151 50.000 0.00 0.00 0.00 5.19
837 883 3.371273 GGGTTAGGTTTAGGTTAGGGCTG 60.371 52.174 0.00 0.00 0.00 4.85
838 884 3.276857 GTTAGGTTTAGGTTAGGGCTGC 58.723 50.000 0.00 0.00 0.00 5.25
845 891 2.566529 GTTAGGGCTGCGGTTTGC 59.433 61.111 0.00 0.00 46.70 3.68
866 912 3.417645 GCGTTCGGATTAAATCAAATCGC 59.582 43.478 0.00 0.00 36.84 4.58
870 916 2.286713 CGGATTAAATCAAATCGCGGCA 60.287 45.455 6.13 0.00 36.84 5.69
921 972 1.592350 GCTGCACGCGAACTTATAAGC 60.592 52.381 15.93 6.32 0.00 3.09
937 990 2.470057 AAGCAGAAAAACAAGGGGGA 57.530 45.000 0.00 0.00 0.00 4.81
1025 1078 2.361610 CAGCCACCACCACATCCC 60.362 66.667 0.00 0.00 0.00 3.85
1026 1079 2.532715 AGCCACCACCACATCCCT 60.533 61.111 0.00 0.00 0.00 4.20
1029 1082 1.925455 CCACCACCACATCCCTCCT 60.925 63.158 0.00 0.00 0.00 3.69
1031 1084 1.616628 ACCACCACATCCCTCCTCC 60.617 63.158 0.00 0.00 0.00 4.30
1032 1085 1.307343 CCACCACATCCCTCCTCCT 60.307 63.158 0.00 0.00 0.00 3.69
1033 1086 1.341156 CCACCACATCCCTCCTCCTC 61.341 65.000 0.00 0.00 0.00 3.71
1070 1127 1.000771 CCCGTCTCCTGACTCCTCA 60.001 63.158 0.00 0.00 40.86 3.86
1076 1133 0.686112 CTCCTGACTCCTCACCCCTC 60.686 65.000 0.00 0.00 0.00 4.30
1643 1721 2.326897 CGAGACGGATTCGCGCTA 59.673 61.111 5.56 0.00 40.80 4.26
1649 1727 1.173444 ACGGATTCGCGCTAGAGGAT 61.173 55.000 5.56 0.00 40.63 3.24
1650 1728 0.039074 CGGATTCGCGCTAGAGGATT 60.039 55.000 5.56 0.00 0.00 3.01
1651 1729 1.704070 GGATTCGCGCTAGAGGATTC 58.296 55.000 5.56 0.73 0.00 2.52
1652 1730 1.332178 GATTCGCGCTAGAGGATTCG 58.668 55.000 5.56 0.00 0.00 3.34
1653 1731 0.664767 ATTCGCGCTAGAGGATTCGC 60.665 55.000 5.56 0.00 43.62 4.70
1655 1733 2.731348 GCGCTAGAGGATTCGCGG 60.731 66.667 6.13 0.00 45.17 6.46
1656 1734 2.731348 CGCTAGAGGATTCGCGGC 60.731 66.667 6.13 0.00 41.72 6.53
1657 1735 2.731348 GCTAGAGGATTCGCGGCG 60.731 66.667 17.70 17.70 0.00 6.46
1658 1736 2.049985 CTAGAGGATTCGCGGCGG 60.050 66.667 23.46 3.89 0.00 6.13
1659 1737 4.280494 TAGAGGATTCGCGGCGGC 62.280 66.667 23.46 12.01 0.00 6.53
1680 1758 3.512452 CGTGCTCGTTCGTCGTCG 61.512 66.667 0.00 0.00 40.80 5.12
1687 1766 4.405173 GTTCGTCGTCGTTGCGGC 62.405 66.667 1.33 0.00 38.33 6.53
1702 1781 1.340889 TGCGGCTTTCTGATTTGCTTT 59.659 42.857 0.00 0.00 0.00 3.51
1713 1803 7.846644 TTCTGATTTGCTTTGTTTGTTGAAT 57.153 28.000 0.00 0.00 0.00 2.57
1723 1813 8.123575 TGCTTTGTTTGTTGAATGAATGATTTG 58.876 29.630 0.00 0.00 0.00 2.32
1727 1817 8.537049 TGTTTGTTGAATGAATGATTTGATCC 57.463 30.769 0.00 0.00 0.00 3.36
1801 1898 4.806571 GCGAGATGCGTGGAACTA 57.193 55.556 0.00 0.00 43.41 2.24
1802 1899 3.274393 GCGAGATGCGTGGAACTAT 57.726 52.632 0.00 0.00 43.41 2.12
1803 1900 2.417339 GCGAGATGCGTGGAACTATA 57.583 50.000 0.00 0.00 43.41 1.31
1833 1936 1.015109 ACGATGACGACGCATCTAGT 58.985 50.000 21.49 14.18 41.90 2.57
1839 1942 3.386486 TGACGACGCATCTAGTTTTTGT 58.614 40.909 0.00 0.00 0.00 2.83
1840 1943 3.183574 TGACGACGCATCTAGTTTTTGTG 59.816 43.478 0.00 0.00 0.00 3.33
1852 1957 7.921786 TCTAGTTTTTGTGTATCCAATGAGG 57.078 36.000 0.00 0.00 39.47 3.86
1865 1970 0.109342 AATGAGGGCAGCGGAATAGG 59.891 55.000 0.00 0.00 0.00 2.57
1885 1991 4.194640 AGGATGAGATGTGGATTTCGTTG 58.805 43.478 0.00 0.00 0.00 4.10
1898 2004 1.923227 TTCGTTGTGCAAACGTGGCA 61.923 50.000 23.62 10.75 43.47 4.92
1904 2010 1.135915 TGTGCAAACGTGGCAGAATTT 59.864 42.857 14.66 0.00 42.85 1.82
1905 2011 1.522258 GTGCAAACGTGGCAGAATTTG 59.478 47.619 14.66 11.69 42.85 2.32
1906 2012 1.139163 GCAAACGTGGCAGAATTTGG 58.861 50.000 15.75 3.28 33.55 3.28
1907 2013 1.269517 GCAAACGTGGCAGAATTTGGA 60.270 47.619 15.75 0.00 33.55 3.53
1908 2014 2.610232 GCAAACGTGGCAGAATTTGGAT 60.610 45.455 15.75 0.00 33.55 3.41
1909 2015 2.988493 CAAACGTGGCAGAATTTGGATG 59.012 45.455 9.20 0.00 0.00 3.51
1910 2016 2.198827 ACGTGGCAGAATTTGGATGA 57.801 45.000 0.00 0.00 0.00 2.92
1911 2017 2.726821 ACGTGGCAGAATTTGGATGAT 58.273 42.857 0.00 0.00 0.00 2.45
1912 2018 2.424601 ACGTGGCAGAATTTGGATGATG 59.575 45.455 0.00 0.00 0.00 3.07
1913 2019 2.684374 CGTGGCAGAATTTGGATGATGA 59.316 45.455 0.00 0.00 0.00 2.92
1950 2102 6.010675 CGACAGAACAAAACGCGATTAATTA 58.989 36.000 15.93 0.00 0.00 1.40
1963 2115 4.728608 GCGATTAATTAAACAACCTCTGCG 59.271 41.667 1.21 0.00 0.00 5.18
1972 2124 4.530710 AACAACCTCTGCGTATGTCTAA 57.469 40.909 0.00 0.00 0.00 2.10
2059 2212 8.856490 AATGATGAGTGAAACACTAAACAAAC 57.144 30.769 4.36 0.63 45.44 2.93
2062 2215 8.609176 TGATGAGTGAAACACTAAACAAACTAC 58.391 33.333 4.36 0.00 45.44 2.73
2064 2217 6.812656 TGAGTGAAACACTAAACAAACTACGA 59.187 34.615 4.36 0.00 45.44 3.43
2067 2220 8.173130 AGTGAAACACTAAACAAACTACGAAAG 58.827 33.333 2.43 0.00 43.46 2.62
2093 2246 6.726258 TTGCATCTAGTAACAACATGACAG 57.274 37.500 0.00 0.00 0.00 3.51
2220 2378 9.994432 GTTTCAATATTCTCTGTGGTTAATGAG 57.006 33.333 0.00 0.00 0.00 2.90
2221 2379 9.739276 TTTCAATATTCTCTGTGGTTAATGAGT 57.261 29.630 0.00 0.00 0.00 3.41
2223 2381 9.817809 TCAATATTCTCTGTGGTTAATGAGTAC 57.182 33.333 0.00 0.00 0.00 2.73
2224 2382 9.823647 CAATATTCTCTGTGGTTAATGAGTACT 57.176 33.333 0.00 0.00 0.00 2.73
2226 2384 5.916661 TCTCTGTGGTTAATGAGTACTCC 57.083 43.478 20.11 4.76 0.00 3.85
2227 2385 4.710375 TCTCTGTGGTTAATGAGTACTCCC 59.290 45.833 20.11 13.43 0.00 4.30
2228 2386 3.446161 TCTGTGGTTAATGAGTACTCCCG 59.554 47.826 20.11 2.02 0.00 5.14
2229 2387 3.433343 TGTGGTTAATGAGTACTCCCGA 58.567 45.455 20.11 1.91 0.00 5.14
2230 2388 4.028131 TGTGGTTAATGAGTACTCCCGAT 58.972 43.478 20.11 4.41 0.00 4.18
2231 2389 4.142026 TGTGGTTAATGAGTACTCCCGATG 60.142 45.833 20.11 0.00 0.00 3.84
2232 2390 4.028131 TGGTTAATGAGTACTCCCGATGT 58.972 43.478 20.11 1.94 0.00 3.06
2233 2391 5.068198 GTGGTTAATGAGTACTCCCGATGTA 59.932 44.000 20.11 0.00 0.00 2.29
2234 2392 5.657745 TGGTTAATGAGTACTCCCGATGTAA 59.342 40.000 20.11 6.66 0.00 2.41
2235 2393 6.154877 TGGTTAATGAGTACTCCCGATGTAAA 59.845 38.462 20.11 0.00 0.00 2.01
2236 2394 6.478016 GGTTAATGAGTACTCCCGATGTAAAC 59.522 42.308 20.11 11.73 0.00 2.01
2237 2395 5.934402 AATGAGTACTCCCGATGTAAACT 57.066 39.130 20.11 0.00 0.00 2.66
2238 2396 8.408601 GTTAATGAGTACTCCCGATGTAAACTA 58.591 37.037 20.11 0.00 0.00 2.24
2239 2397 7.414222 AATGAGTACTCCCGATGTAAACTAA 57.586 36.000 20.11 0.00 0.00 2.24
2240 2398 7.598759 ATGAGTACTCCCGATGTAAACTAAT 57.401 36.000 20.11 0.00 0.00 1.73
2241 2399 8.701908 ATGAGTACTCCCGATGTAAACTAATA 57.298 34.615 20.11 0.00 0.00 0.98
2242 2400 8.701908 TGAGTACTCCCGATGTAAACTAATAT 57.298 34.615 20.11 0.00 0.00 1.28
2243 2401 9.797642 TGAGTACTCCCGATGTAAACTAATATA 57.202 33.333 20.11 0.00 0.00 0.86
2248 2406 8.305317 ACTCCCGATGTAAACTAATATAAGAGC 58.695 37.037 0.00 0.00 0.00 4.09
2249 2407 8.185506 TCCCGATGTAAACTAATATAAGAGCA 57.814 34.615 0.00 0.00 0.00 4.26
2250 2408 8.812972 TCCCGATGTAAACTAATATAAGAGCAT 58.187 33.333 0.00 0.00 0.00 3.79
2251 2409 9.436957 CCCGATGTAAACTAATATAAGAGCATT 57.563 33.333 0.00 0.00 0.00 3.56
2279 2437 9.351570 AGAACACTACTTTAGTAATCTAAACGC 57.648 33.333 0.00 0.00 40.05 4.84
2280 2438 9.351570 GAACACTACTTTAGTAATCTAAACGCT 57.648 33.333 0.00 0.00 40.05 5.07
2281 2439 8.908172 ACACTACTTTAGTAATCTAAACGCTC 57.092 34.615 0.00 0.00 40.05 5.03
2282 2440 8.738106 ACACTACTTTAGTAATCTAAACGCTCT 58.262 33.333 0.00 0.00 40.05 4.09
2283 2441 9.570488 CACTACTTTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 40.05 2.85
2300 2458 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
2520 2678 6.106003 TGTTCAAGCTACAGTGTATACCATG 58.894 40.000 2.82 1.74 0.00 3.66
2577 2739 3.318017 GGTCGGTGTACTATCATGCATC 58.682 50.000 0.00 0.00 0.00 3.91
2578 2740 3.243737 GGTCGGTGTACTATCATGCATCA 60.244 47.826 0.00 0.00 0.00 3.07
2579 2741 3.983988 GTCGGTGTACTATCATGCATCAG 59.016 47.826 0.00 0.00 0.00 2.90
2580 2742 3.005791 TCGGTGTACTATCATGCATCAGG 59.994 47.826 0.00 0.00 0.00 3.86
2581 2743 3.070018 GGTGTACTATCATGCATCAGGC 58.930 50.000 0.00 0.00 45.13 4.85
2582 2744 3.244353 GGTGTACTATCATGCATCAGGCT 60.244 47.826 0.00 0.00 45.15 4.58
2583 2745 3.744942 GTGTACTATCATGCATCAGGCTG 59.255 47.826 8.58 8.58 45.15 4.85
2584 2746 1.893544 ACTATCATGCATCAGGCTGC 58.106 50.000 10.34 0.00 45.15 5.25
2585 2747 1.420514 ACTATCATGCATCAGGCTGCT 59.579 47.619 10.34 0.00 45.15 4.24
2586 2748 1.807142 CTATCATGCATCAGGCTGCTG 59.193 52.381 13.80 13.80 45.15 4.41
2587 2749 1.456196 ATCATGCATCAGGCTGCTGC 61.456 55.000 30.71 30.71 45.15 5.25
2597 2759 2.803479 GCTGCTGCCCTTGTATGC 59.197 61.111 3.85 0.00 0.00 3.14
2598 2760 2.048023 GCTGCTGCCCTTGTATGCA 61.048 57.895 3.85 0.00 35.86 3.96
2599 2761 1.389609 GCTGCTGCCCTTGTATGCAT 61.390 55.000 3.79 3.79 36.79 3.96
2625 2787 1.627329 ACACTGTCACTGATGGCTGAT 59.373 47.619 0.00 0.00 33.81 2.90
2641 2803 9.006839 TGATGGCTGATAATCATTTCATAGTTC 57.993 33.333 0.00 0.00 0.00 3.01
2680 2842 2.310538 CAGGGACAAAAGCCTTGAGTT 58.689 47.619 3.27 0.00 34.69 3.01
2743 2907 8.755696 AAATTTTTAGATGCGCAATACAGAAA 57.244 26.923 17.11 12.09 0.00 2.52
2763 2927 7.124471 CAGAAAATATCTCATGCTTCACTTCG 58.876 38.462 0.00 0.00 35.73 3.79
2788 2990 8.129211 CGACATAATATCACTGTCTGTCTACAA 58.871 37.037 9.34 0.00 37.68 2.41
2850 3052 5.221880 TGCTAATGCACATGTTTGAAGTTC 58.778 37.500 0.00 0.00 45.31 3.01
2901 3103 2.348411 ATAAACGCAATAGCCCAGCT 57.652 45.000 0.00 0.00 43.41 4.24
2942 3144 6.784969 AGGACTGGTAATATGTCTGAGCTTAT 59.215 38.462 0.00 0.00 0.00 1.73
2943 3145 7.950684 AGGACTGGTAATATGTCTGAGCTTATA 59.049 37.037 0.00 0.00 0.00 0.98
3046 3294 6.989155 TTCACTAGGTTCTCCTGTTTTCTA 57.011 37.500 0.00 0.00 44.81 2.10
3207 3455 3.302870 CCAACGGTGAAGTTCACTTTACG 60.303 47.826 29.89 25.91 46.19 3.18
3343 3592 8.537728 TCCCTAAGTGATTGCATTTTGATATT 57.462 30.769 0.00 0.00 0.00 1.28
3346 3595 9.590451 CCTAAGTGATTGCATTTTGATATTTGT 57.410 29.630 0.00 0.00 0.00 2.83
3402 3651 7.977789 TTGCTTGATTATTGTCTTGTCAGTA 57.022 32.000 0.00 0.00 0.00 2.74
3489 3779 8.718102 TGATGCTAAGTTTAGGTTGATAAGTC 57.282 34.615 1.44 0.00 0.00 3.01
3490 3780 8.540388 TGATGCTAAGTTTAGGTTGATAAGTCT 58.460 33.333 1.44 0.00 0.00 3.24
3514 3804 2.432510 GTCTAGTCATTGACTCCCTGGG 59.567 54.545 22.16 6.33 42.40 4.45
3533 3823 5.114764 TGGGTCATGCATATCTTTCTTGA 57.885 39.130 0.00 0.00 0.00 3.02
3541 3831 6.915544 TGCATATCTTTCTTGACTCACATC 57.084 37.500 0.00 0.00 0.00 3.06
3581 3871 5.743398 GCATATGCTTGCGATAACAGAAAAA 59.257 36.000 20.64 0.00 38.21 1.94
3582 3872 6.418819 GCATATGCTTGCGATAACAGAAAAAT 59.581 34.615 20.64 0.00 38.21 1.82
3583 3873 7.566328 GCATATGCTTGCGATAACAGAAAAATG 60.566 37.037 20.64 0.00 38.21 2.32
3584 3874 5.119931 TGCTTGCGATAACAGAAAAATGT 57.880 34.783 0.00 0.00 33.96 2.71
3585 3875 4.916831 TGCTTGCGATAACAGAAAAATGTG 59.083 37.500 0.00 0.00 32.52 3.21
3586 3876 4.201523 GCTTGCGATAACAGAAAAATGTGC 60.202 41.667 0.00 0.00 32.52 4.57
3587 3877 4.495911 TGCGATAACAGAAAAATGTGCA 57.504 36.364 0.00 0.00 32.52 4.57
3588 3878 5.058149 TGCGATAACAGAAAAATGTGCAT 57.942 34.783 0.00 0.00 32.52 3.96
3658 3948 4.142924 TGCTGCAGTATGTGTAAATCGTTG 60.143 41.667 16.64 0.00 39.31 4.10
3716 4036 9.277783 AGCTTGCACTACTTATCCATATAAAAG 57.722 33.333 0.00 0.00 0.00 2.27
3744 4064 2.822764 CGGTTGTCCTGCCTATAGAAC 58.177 52.381 0.00 0.00 0.00 3.01
3751 4071 6.222038 TGTCCTGCCTATAGAACTTTACTG 57.778 41.667 0.00 0.00 0.00 2.74
3752 4072 5.128827 TGTCCTGCCTATAGAACTTTACTGG 59.871 44.000 0.00 0.00 0.00 4.00
3753 4073 5.128991 GTCCTGCCTATAGAACTTTACTGGT 59.871 44.000 0.00 0.00 0.00 4.00
3754 4074 6.323225 GTCCTGCCTATAGAACTTTACTGGTA 59.677 42.308 0.00 0.00 0.00 3.25
3755 4075 6.899075 TCCTGCCTATAGAACTTTACTGGTAA 59.101 38.462 0.00 0.00 0.00 2.85
3756 4076 7.567622 TCCTGCCTATAGAACTTTACTGGTAAT 59.432 37.037 0.00 0.00 0.00 1.89
3757 4077 7.873505 CCTGCCTATAGAACTTTACTGGTAATC 59.126 40.741 0.00 0.00 0.00 1.75
3758 4078 8.548880 TGCCTATAGAACTTTACTGGTAATCT 57.451 34.615 0.00 0.00 0.00 2.40
3797 4117 6.795399 TGAAAGAACCTGTTGTCAAAATCTC 58.205 36.000 0.00 0.00 0.00 2.75
3834 4154 9.347240 CTTGGACATTAGAATACCTTGATTGAT 57.653 33.333 0.00 0.00 0.00 2.57
3835 4155 9.699410 TTGGACATTAGAATACCTTGATTGATT 57.301 29.630 0.00 0.00 0.00 2.57
3836 4156 9.123902 TGGACATTAGAATACCTTGATTGATTG 57.876 33.333 0.00 0.00 0.00 2.67
3837 4157 9.342308 GGACATTAGAATACCTTGATTGATTGA 57.658 33.333 0.00 0.00 0.00 2.57
3940 4261 8.810652 TTACCTGATTTACATTGACAAAAAGC 57.189 30.769 0.00 0.00 0.00 3.51
3989 4310 3.691609 ACCGCTCCTCAAAATCTCATTTC 59.308 43.478 0.00 0.00 0.00 2.17
4073 4394 6.263168 GTGCCCTGATTGTGCTACTATTAATT 59.737 38.462 0.00 0.00 0.00 1.40
4105 4426 4.561500 TTATGTGAAATCCTGAACCGGA 57.438 40.909 9.46 0.00 37.50 5.14
4140 4461 9.874205 AAGAGTTAGAAGAAAATCATCTCTCTG 57.126 33.333 5.25 0.00 30.72 3.35
4200 4521 8.002984 TCATCACATCTATGCAATGAACAAAT 57.997 30.769 3.89 0.00 32.49 2.32
4202 4523 9.738832 CATCACATCTATGCAATGAACAAATAA 57.261 29.630 3.89 0.00 0.00 1.40
4232 4553 5.707242 TTATTTGTCCGTAAACATTGGCA 57.293 34.783 0.00 0.00 0.00 4.92
4242 4563 7.061789 GTCCGTAAACATTGGCAATTTTCTTAG 59.938 37.037 10.65 0.00 0.00 2.18
4283 4604 8.758829 TGTGATTAGTTGGATATACAGTCAGTT 58.241 33.333 0.00 0.00 0.00 3.16
4288 4609 6.561614 AGTTGGATATACAGTCAGTTGTACG 58.438 40.000 0.00 0.00 36.45 3.67
4294 4618 1.687123 ACAGTCAGTTGTACGCCTTCT 59.313 47.619 0.00 0.00 0.00 2.85
4295 4619 2.102588 ACAGTCAGTTGTACGCCTTCTT 59.897 45.455 0.00 0.00 0.00 2.52
4296 4620 2.731976 CAGTCAGTTGTACGCCTTCTTC 59.268 50.000 0.00 0.00 0.00 2.87
4299 4623 1.053424 AGTTGTACGCCTTCTTCCCA 58.947 50.000 0.00 0.00 0.00 4.37
4302 4626 3.262405 AGTTGTACGCCTTCTTCCCAATA 59.738 43.478 0.00 0.00 0.00 1.90
4314 4638 7.118245 GCCTTCTTCCCAATACAAGAAATTTTG 59.882 37.037 0.00 0.00 38.00 2.44
4342 4666 5.696724 AGTAATTATCTTATGGCTCGTGTGC 59.303 40.000 0.00 0.00 0.00 4.57
4343 4667 3.535280 TTATCTTATGGCTCGTGTGCA 57.465 42.857 0.00 0.00 34.04 4.57
4347 4671 4.864704 TCTTATGGCTCGTGTGCATATA 57.135 40.909 0.00 0.00 34.04 0.86
4348 4672 5.208463 TCTTATGGCTCGTGTGCATATAA 57.792 39.130 0.00 1.05 34.04 0.98
4371 4772 2.961526 ATCCGAACGCAGTGAGTTAT 57.038 45.000 12.50 0.03 45.00 1.89
4403 4804 5.570234 TTTGTTCCCTGTCACTAAAACAC 57.430 39.130 0.00 0.00 0.00 3.32
4434 4835 7.875327 ATGTAAATATTAAGAAACACCGCCT 57.125 32.000 0.00 0.00 0.00 5.52
4435 4836 7.079182 TGTAAATATTAAGAAACACCGCCTG 57.921 36.000 0.00 0.00 0.00 4.85
4436 4837 6.879993 TGTAAATATTAAGAAACACCGCCTGA 59.120 34.615 0.00 0.00 0.00 3.86
4437 4838 7.554835 TGTAAATATTAAGAAACACCGCCTGAT 59.445 33.333 0.00 0.00 0.00 2.90
4438 4839 6.377327 AATATTAAGAAACACCGCCTGATG 57.623 37.500 0.00 0.00 0.00 3.07
4531 4932 3.837355 AGACAATCTCCAAGCAAAAGGT 58.163 40.909 0.00 0.00 0.00 3.50
4535 4936 4.405358 ACAATCTCCAAGCAAAAGGTTCAA 59.595 37.500 0.00 0.00 0.00 2.69
4545 4946 5.842907 AGCAAAAGGTTCAACATCCTTAAC 58.157 37.500 0.00 0.00 42.38 2.01
4556 4957 1.019673 ATCCTTAACGCATGCAGCTG 58.980 50.000 19.57 10.11 42.61 4.24
4774 5177 4.299586 TCAGATATTGCTGAACCCACAA 57.700 40.909 0.00 0.00 41.65 3.33
4828 5231 5.065731 GGAGATTGCTGTACAAAATGAGAGG 59.934 44.000 7.91 0.00 42.86 3.69
4891 5294 4.729868 ACATTCCTCCAAAGTAAGCAAGT 58.270 39.130 0.00 0.00 0.00 3.16
4905 5308 7.602517 AGTAAGCAAGTTTCTCATATGTGTC 57.397 36.000 1.90 0.00 0.00 3.67
4969 5372 1.202976 AGCTCTTTGTGCCAATCCAGT 60.203 47.619 0.00 0.00 0.00 4.00
5230 5633 1.228337 TGATGTGTTGGCTGCAGCT 60.228 52.632 35.82 16.47 41.70 4.24
5588 5997 4.523173 CCGGTTCTAGTCCAGCTATGAATA 59.477 45.833 0.00 0.00 0.00 1.75
5604 6013 3.616219 TGAATATTCCACCGGGTTCAAG 58.384 45.455 12.90 0.00 34.93 3.02
5606 6015 3.732048 ATATTCCACCGGGTTCAAGTT 57.268 42.857 6.32 0.00 34.93 2.66
5727 6196 1.303091 CGTCCACCGGGTTCAAATCC 61.303 60.000 6.32 0.00 34.93 3.01
5728 6197 0.250989 GTCCACCGGGTTCAAATCCA 60.251 55.000 6.32 0.00 34.93 3.41
5729 6198 0.250989 TCCACCGGGTTCAAATCCAC 60.251 55.000 6.32 0.00 34.93 4.02
5730 6199 1.248101 CCACCGGGTTCAAATCCACC 61.248 60.000 6.32 0.00 0.00 4.61
5731 6200 0.251165 CACCGGGTTCAAATCCACCT 60.251 55.000 6.32 0.00 33.09 4.00
5732 6201 1.003812 CACCGGGTTCAAATCCACCTA 59.996 52.381 6.32 0.00 33.09 3.08
5733 6202 1.920351 ACCGGGTTCAAATCCACCTAT 59.080 47.619 6.32 0.00 33.09 2.57
5734 6203 2.297701 CCGGGTTCAAATCCACCTATG 58.702 52.381 0.00 0.00 33.09 2.23
5735 6204 2.092646 CCGGGTTCAAATCCACCTATGA 60.093 50.000 0.00 0.00 33.09 2.15
5736 6205 3.206150 CGGGTTCAAATCCACCTATGAG 58.794 50.000 0.00 0.00 33.09 2.90
5737 6206 3.370527 CGGGTTCAAATCCACCTATGAGT 60.371 47.826 0.00 0.00 33.09 3.41
5738 6207 4.200092 GGGTTCAAATCCACCTATGAGTC 58.800 47.826 0.00 0.00 33.09 3.36
5739 6208 3.871594 GGTTCAAATCCACCTATGAGTCG 59.128 47.826 0.00 0.00 0.00 4.18
5740 6209 4.504858 GTTCAAATCCACCTATGAGTCGT 58.495 43.478 0.00 0.00 0.00 4.34
5741 6210 4.386867 TCAAATCCACCTATGAGTCGTC 57.613 45.455 0.00 0.00 0.00 4.20
5742 6211 3.132289 TCAAATCCACCTATGAGTCGTCC 59.868 47.826 0.00 0.00 0.00 4.79
5743 6212 2.454336 ATCCACCTATGAGTCGTCCA 57.546 50.000 0.00 0.00 0.00 4.02
5744 6213 1.471119 TCCACCTATGAGTCGTCCAC 58.529 55.000 0.00 0.00 0.00 4.02
5745 6214 0.460311 CCACCTATGAGTCGTCCACC 59.540 60.000 0.00 0.00 0.00 4.61
5746 6215 0.100682 CACCTATGAGTCGTCCACCG 59.899 60.000 0.00 0.00 38.13 4.94
5747 6216 1.035932 ACCTATGAGTCGTCCACCGG 61.036 60.000 0.00 0.00 37.11 5.28
5748 6217 1.734137 CTATGAGTCGTCCACCGGG 59.266 63.158 6.32 0.00 37.11 5.73
5749 6218 1.735376 CTATGAGTCGTCCACCGGGG 61.735 65.000 6.32 0.00 37.11 5.73
5750 6219 2.503846 TATGAGTCGTCCACCGGGGT 62.504 60.000 6.32 0.00 38.11 4.95
5751 6220 3.756727 GAGTCGTCCACCGGGGTC 61.757 72.222 6.32 0.95 38.11 4.46
5752 6221 4.608774 AGTCGTCCACCGGGGTCA 62.609 66.667 6.32 0.00 38.11 4.02
5753 6222 3.618750 GTCGTCCACCGGGGTCAA 61.619 66.667 6.32 0.00 38.11 3.18
5754 6223 2.843411 TCGTCCACCGGGGTCAAA 60.843 61.111 6.32 0.00 38.11 2.69
5755 6224 2.218454 TCGTCCACCGGGGTCAAAT 61.218 57.895 6.32 0.00 38.11 2.32
5756 6225 1.743995 CGTCCACCGGGGTCAAATC 60.744 63.158 6.32 0.00 38.11 2.17
5757 6226 1.378119 GTCCACCGGGGTCAAATCC 60.378 63.158 6.32 0.00 38.11 3.01
5758 6227 1.848431 TCCACCGGGGTCAAATCCA 60.848 57.895 6.32 0.00 38.11 3.41
5759 6228 1.378514 CCACCGGGGTCAAATCCAG 60.379 63.158 6.32 0.00 0.00 3.86
5760 6229 2.046285 CACCGGGGTCAAATCCAGC 61.046 63.158 6.32 0.00 0.00 4.85
5761 6230 2.231380 ACCGGGGTCAAATCCAGCT 61.231 57.895 6.32 0.00 0.00 4.24
5762 6231 0.912487 ACCGGGGTCAAATCCAGCTA 60.912 55.000 6.32 0.00 0.00 3.32
5763 6232 0.474184 CCGGGGTCAAATCCAGCTAT 59.526 55.000 0.00 0.00 0.00 2.97
5764 6233 1.597742 CGGGGTCAAATCCAGCTATG 58.402 55.000 0.00 0.00 0.00 2.23
5765 6234 1.140852 CGGGGTCAAATCCAGCTATGA 59.859 52.381 0.00 0.00 0.00 2.15
5766 6235 2.808202 CGGGGTCAAATCCAGCTATGAG 60.808 54.545 0.00 0.00 0.00 2.90
5767 6236 2.173569 GGGGTCAAATCCAGCTATGAGT 59.826 50.000 0.00 0.00 0.00 3.41
5768 6237 3.471680 GGGTCAAATCCAGCTATGAGTC 58.528 50.000 0.00 0.00 0.00 3.36
5769 6238 3.118261 GGGTCAAATCCAGCTATGAGTCA 60.118 47.826 0.00 0.00 0.00 3.41
5770 6239 4.445448 GGGTCAAATCCAGCTATGAGTCAT 60.445 45.833 11.12 11.12 0.00 3.06
5771 6240 4.754114 GGTCAAATCCAGCTATGAGTCATC 59.246 45.833 9.42 0.00 0.00 2.92
5772 6241 4.754114 GTCAAATCCAGCTATGAGTCATCC 59.246 45.833 9.42 2.19 0.00 3.51
5773 6242 4.409901 TCAAATCCAGCTATGAGTCATCCA 59.590 41.667 9.42 0.00 0.00 3.41
5774 6243 4.348863 AATCCAGCTATGAGTCATCCAC 57.651 45.455 9.42 0.27 0.00 4.02
5775 6244 2.042464 TCCAGCTATGAGTCATCCACC 58.958 52.381 9.42 0.00 0.00 4.61
5776 6245 1.269988 CCAGCTATGAGTCATCCACCG 60.270 57.143 9.42 0.00 0.00 4.94
5777 6246 1.043816 AGCTATGAGTCATCCACCGG 58.956 55.000 9.42 0.00 0.00 5.28
5778 6247 0.034059 GCTATGAGTCATCCACCGGG 59.966 60.000 9.42 0.00 0.00 5.73
5779 6248 1.414158 CTATGAGTCATCCACCGGGT 58.586 55.000 9.42 0.00 34.93 5.28
5780 6249 1.762957 CTATGAGTCATCCACCGGGTT 59.237 52.381 9.42 0.00 34.93 4.11
5781 6250 0.541863 ATGAGTCATCCACCGGGTTC 59.458 55.000 6.32 0.00 34.93 3.62
5782 6251 0.834261 TGAGTCATCCACCGGGTTCA 60.834 55.000 6.32 0.00 34.93 3.18
5783 6252 0.323629 GAGTCATCCACCGGGTTCAA 59.676 55.000 6.32 0.00 34.93 2.69
5784 6253 0.768622 AGTCATCCACCGGGTTCAAA 59.231 50.000 6.32 0.00 34.93 2.69
5785 6254 1.354368 AGTCATCCACCGGGTTCAAAT 59.646 47.619 6.32 0.00 34.93 2.32
5786 6255 1.743394 GTCATCCACCGGGTTCAAATC 59.257 52.381 6.32 0.00 34.93 2.17
5905 6374 3.855689 ATGAATTTTTCAGGTGCTCCG 57.144 42.857 0.00 0.00 43.98 4.63
5977 6446 5.182570 TGAGAAGCAGGAATCATTTGAACAG 59.817 40.000 0.00 0.00 0.00 3.16
6012 6481 5.653769 AGTTTGGAATGTACCATCAATCTGG 59.346 40.000 0.00 0.00 39.82 3.86
6013 6482 5.449297 TTGGAATGTACCATCAATCTGGA 57.551 39.130 0.00 0.00 39.82 3.86
6014 6483 5.449297 TGGAATGTACCATCAATCTGGAA 57.551 39.130 0.00 0.00 39.73 3.53
6079 6548 4.951254 TGGTGAACAGAGATACGAAAACA 58.049 39.130 0.00 0.00 0.00 2.83
6301 6770 6.389091 TGGTTCAATATCTTTTCACATGCAC 58.611 36.000 0.00 0.00 0.00 4.57
6323 6792 5.121611 CACGGTTCAGTAAATATTGCAGACA 59.878 40.000 0.00 0.00 0.00 3.41
6461 6930 9.185680 AGATTTTTACTGAACCATTATACACCC 57.814 33.333 0.00 0.00 0.00 4.61
6462 6931 9.185680 GATTTTTACTGAACCATTATACACCCT 57.814 33.333 0.00 0.00 0.00 4.34
6463 6932 8.943594 TTTTTACTGAACCATTATACACCCTT 57.056 30.769 0.00 0.00 0.00 3.95
6464 6933 8.570068 TTTTACTGAACCATTATACACCCTTC 57.430 34.615 0.00 0.00 0.00 3.46
6465 6934 7.504926 TTACTGAACCATTATACACCCTTCT 57.495 36.000 0.00 0.00 0.00 2.85
6482 6951 7.451566 ACACCCTTCTTTATTGAAGCACTTAAT 59.548 33.333 0.00 0.00 41.36 1.40
6504 6974 1.063166 GGCTAGTTTCATGCTGCGC 59.937 57.895 0.00 0.00 0.00 6.09
6544 7014 8.394121 TCTGGTTTTAATTTGTGTGAAAATTGC 58.606 29.630 5.40 0.00 39.48 3.56
6611 7081 6.369615 TCTTACGGGACAGTTTTAACTTATGC 59.630 38.462 0.00 0.00 37.08 3.14
6785 7305 8.794553 TCCTTTGTTTTAATTTAGTCGGCATAA 58.205 29.630 0.00 0.00 0.00 1.90
6799 7319 5.468072 AGTCGGCATAATAGCTTTCATTGAG 59.532 40.000 0.00 0.00 34.17 3.02
7027 7558 9.561069 AGTAGATATTTTGTGAAGTCAAACACT 57.439 29.630 0.00 0.00 37.10 3.55
7029 7560 8.450578 AGATATTTTGTGAAGTCAAACACTCA 57.549 30.769 0.00 0.00 37.10 3.41
7242 7773 6.071952 GGAAGAAAGTAAATCATGTTCTGGCA 60.072 38.462 0.00 0.00 0.00 4.92
7243 7774 6.506500 AGAAAGTAAATCATGTTCTGGCAG 57.493 37.500 8.58 8.58 0.00 4.85
7244 7775 5.416952 AGAAAGTAAATCATGTTCTGGCAGG 59.583 40.000 15.73 0.00 0.00 4.85
7245 7776 4.574674 AGTAAATCATGTTCTGGCAGGA 57.425 40.909 15.73 1.78 33.60 3.86
7247 7778 5.513233 AGTAAATCATGTTCTGGCAGGAAT 58.487 37.500 15.73 3.17 32.80 3.01
7248 7779 6.662755 AGTAAATCATGTTCTGGCAGGAATA 58.337 36.000 15.73 6.62 32.80 1.75
7249 7780 7.293073 AGTAAATCATGTTCTGGCAGGAATAT 58.707 34.615 15.73 8.60 32.80 1.28
7250 7781 6.401047 AAATCATGTTCTGGCAGGAATATG 57.599 37.500 15.73 18.58 42.30 1.78
7251 7782 4.508551 TCATGTTCTGGCAGGAATATGT 57.491 40.909 22.56 3.80 41.92 2.29
7252 7783 5.628797 TCATGTTCTGGCAGGAATATGTA 57.371 39.130 22.56 13.93 41.92 2.29
7253 7784 6.191657 TCATGTTCTGGCAGGAATATGTAT 57.808 37.500 22.56 6.34 41.92 2.29
7254 7785 7.315066 TCATGTTCTGGCAGGAATATGTATA 57.685 36.000 22.56 10.98 41.92 1.47
7255 7786 7.161404 TCATGTTCTGGCAGGAATATGTATAC 58.839 38.462 22.56 0.00 41.92 1.47
7287 7846 8.980481 AAGTCTTTTTAGAGATTCCAACAAGA 57.020 30.769 0.00 0.00 0.00 3.02
7288 7847 8.980481 AGTCTTTTTAGAGATTCCAACAAGAA 57.020 30.769 0.00 0.00 0.00 2.52
7310 7869 5.796350 AACTACATACGGAGCAAAATGAC 57.204 39.130 0.00 0.00 0.00 3.06
7316 7875 5.065218 ACATACGGAGCAAAATGACTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
7320 7879 4.631377 CGGAGCAAAATGACTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
7323 7882 6.150140 GGAGCAAAATGACTGAATCTACACTT 59.850 38.462 0.00 0.00 0.00 3.16
7379 7938 7.555306 AGTCTGTTTGAAACCTCTAAAAGAC 57.445 36.000 5.50 9.47 45.06 3.01
7380 7939 7.555306 GTCTGTTTGAAACCTCTAAAAGACT 57.445 36.000 5.50 0.00 43.13 3.24
7416 7978 5.591067 ACAGAGGGAGTAGACTTTTATCTCG 59.409 44.000 0.00 0.00 0.00 4.04
7428 7990 2.620251 TTATCTCGGTCTTGCATGGG 57.380 50.000 0.00 0.00 0.00 4.00
7439 8001 2.436646 GCATGGGTCACCCTCACG 60.437 66.667 16.04 0.32 45.70 4.35
7468 8030 2.298300 GAACAAACACGTGCATTCTCG 58.702 47.619 17.22 2.46 35.54 4.04
7494 8056 4.862350 TGAGACGTCTACATGTTTTTCGA 58.138 39.130 20.09 0.00 0.00 3.71
7495 8057 5.283294 TGAGACGTCTACATGTTTTTCGAA 58.717 37.500 20.09 0.00 0.00 3.71
7496 8058 5.749588 TGAGACGTCTACATGTTTTTCGAAA 59.250 36.000 20.09 6.47 0.00 3.46
7497 8059 6.074516 TGAGACGTCTACATGTTTTTCGAAAG 60.075 38.462 20.09 1.59 0.00 2.62
7498 8060 4.769215 ACGTCTACATGTTTTTCGAAAGC 58.231 39.130 10.98 8.87 0.00 3.51
7499 8061 4.271533 ACGTCTACATGTTTTTCGAAAGCA 59.728 37.500 10.98 13.99 0.00 3.91
7500 8062 5.049680 ACGTCTACATGTTTTTCGAAAGCAT 60.050 36.000 18.29 18.29 0.00 3.79
7501 8063 5.281376 CGTCTACATGTTTTTCGAAAGCATG 59.719 40.000 32.49 32.49 38.20 4.06
7502 8064 5.059710 GTCTACATGTTTTTCGAAAGCATGC 59.940 40.000 33.24 22.90 36.98 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 0.108585 AACGGCCAAGACAGTGACAT 59.891 50.000 2.24 0.00 0.00 3.06
49 50 1.283793 CTTGCAACGGCCAAGACAG 59.716 57.895 2.24 0.00 40.13 3.51
83 84 5.048083 TGCTTCATTTCCAGATAACAACCAC 60.048 40.000 0.00 0.00 0.00 4.16
129 130 0.378610 GGCTCTATGAAAAGCGCACC 59.621 55.000 11.47 0.00 39.47 5.01
133 137 0.811616 AGCCGGCTCTATGAAAAGCG 60.812 55.000 27.08 0.00 39.47 4.68
149 153 0.251354 TGATCAGAGCACTTCCAGCC 59.749 55.000 0.00 0.00 0.00 4.85
162 172 1.344458 GCAGACGTGACACTGATCAG 58.656 55.000 21.37 21.37 36.38 2.90
195 205 2.815308 CTACTAGTGCCCTGCCCG 59.185 66.667 5.39 0.00 0.00 6.13
208 218 1.032114 GGAAATGCCCAAGCGCTACT 61.032 55.000 12.05 0.00 44.31 2.57
218 228 2.149973 ACAGGATTCTGGAAATGCCC 57.850 50.000 5.84 0.00 44.99 5.36
250 260 2.670414 CGTGAAGCATCTTCAGAGTTCC 59.330 50.000 9.29 0.00 0.00 3.62
303 321 2.092914 GGCTTGGCTACATGTAACCTCT 60.093 50.000 22.64 0.00 0.00 3.69
314 332 1.153429 CCCTACGTGGCTTGGCTAC 60.153 63.158 0.00 0.00 36.68 3.58
315 333 1.196104 AACCCTACGTGGCTTGGCTA 61.196 55.000 0.00 0.00 0.00 3.93
317 335 1.022982 GTAACCCTACGTGGCTTGGC 61.023 60.000 0.00 0.00 0.00 4.52
318 336 0.392060 GGTAACCCTACGTGGCTTGG 60.392 60.000 0.00 0.00 0.00 3.61
319 337 0.611714 AGGTAACCCTACGTGGCTTG 59.388 55.000 0.00 0.00 40.19 4.01
320 338 0.900421 GAGGTAACCCTACGTGGCTT 59.100 55.000 0.00 0.00 42.86 4.35
343 361 2.362077 ACTTTCGAATGCTTTGCTGGTT 59.638 40.909 10.71 0.00 0.00 3.67
417 436 5.091431 CCTGAATTTGATTCGCTGACTTTC 58.909 41.667 0.00 0.00 42.15 2.62
547 586 1.229658 CTGGACAGGAACTCCCCCT 60.230 63.158 0.00 0.00 34.60 4.79
549 588 0.903236 GTACTGGACAGGAACTCCCC 59.097 60.000 4.14 0.00 34.60 4.81
550 589 0.531200 CGTACTGGACAGGAACTCCC 59.469 60.000 4.14 0.00 34.60 4.30
616 655 0.108329 AAAGTCCATGAGGCGTACGG 60.108 55.000 18.39 0.00 33.74 4.02
617 656 0.999406 CAAAGTCCATGAGGCGTACG 59.001 55.000 11.84 11.84 33.74 3.67
623 669 3.377485 CAGATTGAGCAAAGTCCATGAGG 59.623 47.826 0.00 0.00 0.00 3.86
713 759 0.108329 CGTGTTGCCCTTACGATCCT 60.108 55.000 0.00 0.00 40.01 3.24
753 799 1.908793 CCTCCGCCTATCATCCCGT 60.909 63.158 0.00 0.00 0.00 5.28
758 804 2.888447 GCTGCCCTCCGCCTATCAT 61.888 63.158 0.00 0.00 36.24 2.45
766 812 2.270874 ATTTACCAGGCTGCCCTCCG 62.271 60.000 16.57 2.57 40.33 4.63
775 821 0.808755 CCGGTGTGAATTTACCAGGC 59.191 55.000 0.00 0.00 36.76 4.85
797 843 2.440247 GACCCCAAATCCAGGCCG 60.440 66.667 0.00 0.00 0.00 6.13
828 874 2.566529 GCAAACCGCAGCCCTAAC 59.433 61.111 0.00 0.00 41.79 2.34
832 878 4.700365 GAACGCAAACCGCAGCCC 62.700 66.667 0.00 0.00 42.60 5.19
835 881 2.182614 AATCCGAACGCAAACCGCAG 62.183 55.000 0.00 0.00 42.60 5.18
836 882 0.949588 TAATCCGAACGCAAACCGCA 60.950 50.000 0.00 0.00 42.60 5.69
837 883 0.166379 TTAATCCGAACGCAAACCGC 59.834 50.000 0.00 0.00 41.76 5.68
838 884 2.598000 TTTAATCCGAACGCAAACCG 57.402 45.000 0.00 0.00 44.21 4.44
845 891 3.653113 CGCGATTTGATTTAATCCGAACG 59.347 43.478 0.00 5.22 33.73 3.95
870 916 3.587933 GAGCCGAGATCGACGCCT 61.588 66.667 3.31 4.54 43.02 5.52
899 950 0.808453 TATAAGTTCGCGTGCAGCCC 60.808 55.000 5.77 0.00 44.76 5.19
921 972 5.351948 TCTTTTTCCCCCTTGTTTTTCTG 57.648 39.130 0.00 0.00 0.00 3.02
937 990 5.052633 CGTCGATTTGCGTTTCTTTCTTTTT 60.053 36.000 0.00 0.00 41.80 1.94
1025 1078 2.520741 GGAGGCGAGGAGGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
1026 1079 3.024356 AGGAGGCGAGGAGGAGGA 61.024 66.667 0.00 0.00 0.00 3.71
1029 1082 2.043852 GTGAGGAGGCGAGGAGGA 60.044 66.667 0.00 0.00 0.00 3.71
1031 1084 2.363018 TGGTGAGGAGGCGAGGAG 60.363 66.667 0.00 0.00 0.00 3.69
1032 1085 2.680352 GTGGTGAGGAGGCGAGGA 60.680 66.667 0.00 0.00 0.00 3.71
1033 1086 3.775654 GGTGGTGAGGAGGCGAGG 61.776 72.222 0.00 0.00 0.00 4.63
1070 1127 0.624795 GATTTGGAGGGGAGAGGGGT 60.625 60.000 0.00 0.00 0.00 4.95
1076 1133 2.193248 GGCGGATTTGGAGGGGAG 59.807 66.667 0.00 0.00 0.00 4.30
1115 1172 3.618855 TTAGCCCCTGCCTCCTCGT 62.619 63.158 0.00 0.00 38.69 4.18
1116 1173 2.764128 TTAGCCCCTGCCTCCTCG 60.764 66.667 0.00 0.00 38.69 4.63
1629 1707 1.370657 CCTCTAGCGCGAATCCGTC 60.371 63.158 12.10 0.00 38.24 4.79
1662 1740 3.813688 GACGACGAACGAGCACGC 61.814 66.667 0.00 0.00 45.77 5.34
1663 1741 3.512452 CGACGACGAACGAGCACG 61.512 66.667 0.00 0.76 45.77 5.34
1664 1742 2.007641 AACGACGACGAACGAGCAC 61.008 57.895 15.32 0.00 45.77 4.40
1665 1743 2.007114 CAACGACGACGAACGAGCA 61.007 57.895 15.32 0.00 45.77 4.26
1666 1744 2.755095 CAACGACGACGAACGAGC 59.245 61.111 15.32 4.71 45.77 5.03
1678 1756 1.069296 CAAATCAGAAAGCCGCAACGA 60.069 47.619 0.00 0.00 0.00 3.85
1680 1758 1.063031 GCAAATCAGAAAGCCGCAAC 58.937 50.000 0.00 0.00 0.00 4.17
1687 1766 7.293402 TCAACAAACAAAGCAAATCAGAAAG 57.707 32.000 0.00 0.00 0.00 2.62
1702 1781 7.328982 CGGATCAAATCATTCATTCAACAAACA 59.671 33.333 0.00 0.00 0.00 2.83
1713 1803 4.484236 GCAACAACGGATCAAATCATTCA 58.516 39.130 0.00 0.00 0.00 2.57
1723 1813 1.024579 ATCCCACGCAACAACGGATC 61.025 55.000 0.00 0.00 37.37 3.36
1727 1817 1.418367 CGTATCCCACGCAACAACG 59.582 57.895 0.00 0.00 45.03 4.10
1746 1836 3.636282 AACAAAAGCATACAACGGGAC 57.364 42.857 0.00 0.00 0.00 4.46
1798 1895 8.589629 GTCGTCATCGTTTGTTTTACATATAGT 58.410 33.333 0.00 0.00 38.33 2.12
1799 1896 7.781605 CGTCGTCATCGTTTGTTTTACATATAG 59.218 37.037 0.00 0.00 38.33 1.31
1800 1897 7.602645 CGTCGTCATCGTTTGTTTTACATATA 58.397 34.615 0.00 0.00 38.33 0.86
1801 1898 6.463478 CGTCGTCATCGTTTGTTTTACATAT 58.537 36.000 0.00 0.00 38.33 1.78
1802 1899 5.665943 GCGTCGTCATCGTTTGTTTTACATA 60.666 40.000 0.00 0.00 38.33 2.29
1803 1900 4.694177 CGTCGTCATCGTTTGTTTTACAT 58.306 39.130 0.00 0.00 38.33 2.29
1840 1943 0.886490 CCGCTGCCCTCATTGGATAC 60.886 60.000 0.00 0.00 38.35 2.24
1852 1957 0.681733 TCTCATCCTATTCCGCTGCC 59.318 55.000 0.00 0.00 0.00 4.85
1865 1970 4.728882 GCACAACGAAATCCACATCTCATC 60.729 45.833 0.00 0.00 0.00 2.92
1885 1991 1.522258 CAAATTCTGCCACGTTTGCAC 59.478 47.619 5.45 0.00 34.46 4.57
1898 2004 8.812513 TGTTAATCACTCATCATCCAAATTCT 57.187 30.769 0.00 0.00 0.00 2.40
1904 2010 5.127031 TCGTCTGTTAATCACTCATCATCCA 59.873 40.000 0.00 0.00 0.00 3.41
1905 2011 5.460419 GTCGTCTGTTAATCACTCATCATCC 59.540 44.000 0.00 0.00 0.00 3.51
1906 2012 6.036470 TGTCGTCTGTTAATCACTCATCATC 58.964 40.000 0.00 0.00 0.00 2.92
1907 2013 5.965922 TGTCGTCTGTTAATCACTCATCAT 58.034 37.500 0.00 0.00 0.00 2.45
1908 2014 5.183140 TCTGTCGTCTGTTAATCACTCATCA 59.817 40.000 0.00 0.00 0.00 3.07
1909 2015 5.641709 TCTGTCGTCTGTTAATCACTCATC 58.358 41.667 0.00 0.00 0.00 2.92
1910 2016 5.644977 TCTGTCGTCTGTTAATCACTCAT 57.355 39.130 0.00 0.00 0.00 2.90
1911 2017 5.220381 GTTCTGTCGTCTGTTAATCACTCA 58.780 41.667 0.00 0.00 0.00 3.41
1912 2018 5.220381 TGTTCTGTCGTCTGTTAATCACTC 58.780 41.667 0.00 0.00 0.00 3.51
1913 2019 5.196341 TGTTCTGTCGTCTGTTAATCACT 57.804 39.130 0.00 0.00 0.00 3.41
1950 2102 3.402628 AGACATACGCAGAGGTTGTTT 57.597 42.857 0.00 0.00 0.00 2.83
1963 2115 5.403766 CCTGATGCTGTTCGATTAGACATAC 59.596 44.000 1.03 0.00 0.00 2.39
2201 2359 7.069578 GGGAGTACTCATTAACCACAGAGAATA 59.930 40.741 23.91 0.00 32.59 1.75
2217 2375 8.701908 ATATTAGTTTACATCGGGAGTACTCA 57.298 34.615 23.91 4.49 0.00 3.41
2222 2380 8.305317 GCTCTTATATTAGTTTACATCGGGAGT 58.695 37.037 0.00 0.00 0.00 3.85
2223 2381 8.304596 TGCTCTTATATTAGTTTACATCGGGAG 58.695 37.037 0.00 0.00 0.00 4.30
2224 2382 8.185506 TGCTCTTATATTAGTTTACATCGGGA 57.814 34.615 0.00 0.00 0.00 5.14
2225 2383 9.436957 AATGCTCTTATATTAGTTTACATCGGG 57.563 33.333 0.00 0.00 0.00 5.14
2253 2411 9.351570 GCGTTTAGATTACTAAAGTAGTGTTCT 57.648 33.333 0.00 3.55 45.42 3.01
2254 2412 9.351570 AGCGTTTAGATTACTAAAGTAGTGTTC 57.648 33.333 0.00 0.00 45.42 3.18
2255 2413 9.351570 GAGCGTTTAGATTACTAAAGTAGTGTT 57.648 33.333 0.00 0.00 45.42 3.32
2256 2414 8.738106 AGAGCGTTTAGATTACTAAAGTAGTGT 58.262 33.333 0.00 0.00 45.42 3.55
2257 2415 9.570488 AAGAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
2274 2432 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
2275 2433 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
2276 2434 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
2277 2435 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
2278 2436 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
2284 2442 9.710818 TCAACTACTCCCTCTGTAAACTAATAT 57.289 33.333 0.00 0.00 0.00 1.28
2285 2443 9.710818 ATCAACTACTCCCTCTGTAAACTAATA 57.289 33.333 0.00 0.00 0.00 0.98
2286 2444 8.611051 ATCAACTACTCCCTCTGTAAACTAAT 57.389 34.615 0.00 0.00 0.00 1.73
2287 2445 8.311836 CAATCAACTACTCCCTCTGTAAACTAA 58.688 37.037 0.00 0.00 0.00 2.24
2288 2446 7.672660 TCAATCAACTACTCCCTCTGTAAACTA 59.327 37.037 0.00 0.00 0.00 2.24
2289 2447 6.497259 TCAATCAACTACTCCCTCTGTAAACT 59.503 38.462 0.00 0.00 0.00 2.66
2290 2448 6.698380 TCAATCAACTACTCCCTCTGTAAAC 58.302 40.000 0.00 0.00 0.00 2.01
2291 2449 6.928348 TCAATCAACTACTCCCTCTGTAAA 57.072 37.500 0.00 0.00 0.00 2.01
2292 2450 7.496346 AATCAATCAACTACTCCCTCTGTAA 57.504 36.000 0.00 0.00 0.00 2.41
2293 2451 7.496346 AAATCAATCAACTACTCCCTCTGTA 57.504 36.000 0.00 0.00 0.00 2.74
2294 2452 6.380079 AAATCAATCAACTACTCCCTCTGT 57.620 37.500 0.00 0.00 0.00 3.41
2295 2453 8.043710 ACTTAAATCAATCAACTACTCCCTCTG 58.956 37.037 0.00 0.00 0.00 3.35
2296 2454 8.043710 CACTTAAATCAATCAACTACTCCCTCT 58.956 37.037 0.00 0.00 0.00 3.69
2297 2455 7.824779 ACACTTAAATCAATCAACTACTCCCTC 59.175 37.037 0.00 0.00 0.00 4.30
2298 2456 7.690256 ACACTTAAATCAATCAACTACTCCCT 58.310 34.615 0.00 0.00 0.00 4.20
2299 2457 7.606456 TGACACTTAAATCAATCAACTACTCCC 59.394 37.037 0.00 0.00 0.00 4.30
2300 2458 8.547967 TGACACTTAAATCAATCAACTACTCC 57.452 34.615 0.00 0.00 0.00 3.85
2336 2494 2.416431 GCATTGGCTCATGAAACAGGAC 60.416 50.000 0.00 0.00 36.96 3.85
2503 2661 6.340962 TGGATACATGGTATACACTGTAGC 57.659 41.667 17.39 17.39 46.17 3.58
2542 2700 1.891150 ACCGACCGATCACTAGTGTTT 59.109 47.619 21.99 11.33 0.00 2.83
2545 2703 0.809385 ACACCGACCGATCACTAGTG 59.191 55.000 17.17 17.17 0.00 2.74
2580 2742 1.389609 ATGCATACAAGGGCAGCAGC 61.390 55.000 0.00 0.00 44.24 5.25
2581 2743 0.384309 CATGCATACAAGGGCAGCAG 59.616 55.000 0.00 0.00 44.24 4.24
2582 2744 1.669049 GCATGCATACAAGGGCAGCA 61.669 55.000 14.21 0.00 44.24 4.41
2583 2745 1.066918 GCATGCATACAAGGGCAGC 59.933 57.895 14.21 0.00 44.24 5.25
2584 2746 0.818938 TTGCATGCATACAAGGGCAG 59.181 50.000 23.37 0.00 44.24 4.85
2585 2747 1.487300 ATTGCATGCATACAAGGGCA 58.513 45.000 23.37 10.40 45.23 5.36
2586 2748 2.361757 TGTATTGCATGCATACAAGGGC 59.638 45.455 26.63 7.88 0.00 5.19
2587 2749 3.633525 AGTGTATTGCATGCATACAAGGG 59.366 43.478 28.65 0.00 33.24 3.95
2588 2750 4.096833 ACAGTGTATTGCATGCATACAAGG 59.903 41.667 28.65 25.46 33.24 3.61
2589 2751 5.163733 TGACAGTGTATTGCATGCATACAAG 60.164 40.000 28.65 25.83 33.24 3.16
2590 2752 4.699257 TGACAGTGTATTGCATGCATACAA 59.301 37.500 28.65 14.58 33.24 2.41
2591 2753 4.094739 GTGACAGTGTATTGCATGCATACA 59.905 41.667 23.37 24.95 0.00 2.29
2592 2754 4.333649 AGTGACAGTGTATTGCATGCATAC 59.666 41.667 23.37 22.93 0.00 2.39
2593 2755 4.333372 CAGTGACAGTGTATTGCATGCATA 59.667 41.667 23.37 12.94 0.00 3.14
2594 2756 3.128068 CAGTGACAGTGTATTGCATGCAT 59.872 43.478 23.37 14.00 0.00 3.96
2595 2757 2.485038 CAGTGACAGTGTATTGCATGCA 59.515 45.455 18.46 18.46 0.00 3.96
2596 2758 2.743664 TCAGTGACAGTGTATTGCATGC 59.256 45.455 11.82 11.82 0.00 4.06
2597 2759 4.201881 CCATCAGTGACAGTGTATTGCATG 60.202 45.833 10.07 5.50 0.00 4.06
2598 2760 3.943381 CCATCAGTGACAGTGTATTGCAT 59.057 43.478 10.07 0.00 0.00 3.96
2599 2761 3.337358 CCATCAGTGACAGTGTATTGCA 58.663 45.455 10.07 0.00 0.00 4.08
2641 2803 3.315470 CCTGCTGGAGATCATGAATTGTG 59.685 47.826 2.92 0.00 34.57 3.33
2702 2866 9.871175 TCTAAAAATTTAAGGGTAACAACTCCT 57.129 29.630 0.00 0.00 39.74 3.69
2743 2907 5.664457 TGTCGAAGTGAAGCATGAGATATT 58.336 37.500 0.00 0.00 0.00 1.28
2763 2927 9.803315 TTTGTAGACAGACAGTGATATTATGTC 57.197 33.333 0.00 0.00 42.91 3.06
2850 3052 8.886719 TGTAAATCTAGATTCTGTTGCATTCTG 58.113 33.333 18.19 0.00 0.00 3.02
2888 3090 1.542492 ATATGCAGCTGGGCTATTGC 58.458 50.000 17.12 0.00 36.40 3.56
2901 3103 4.264253 CAGTCCTCCAGAACAAATATGCA 58.736 43.478 0.00 0.00 0.00 3.96
2951 3153 9.656040 TGTTTTCTGCATGCTATATTCAATTTT 57.344 25.926 20.33 0.00 0.00 1.82
3046 3294 6.877611 ACAGGACAAACATCGTTCTTTTAT 57.122 33.333 0.00 0.00 0.00 1.40
3113 3361 2.039613 GGCCATCTAATGCCTCTAGCTT 59.960 50.000 0.00 0.00 44.46 3.74
3207 3455 2.095532 GTGTCTCATGCTGAACAGATGC 59.904 50.000 5.97 0.00 0.00 3.91
3239 3487 8.302438 GGCTTCAGCTAATAAATGCATTATCTT 58.698 33.333 13.39 9.04 41.70 2.40
3343 3592 9.804758 ACGAACAAGAAATATTTGGTTTTACAA 57.195 25.926 5.17 0.00 0.00 2.41
3356 3605 7.172532 AGCAATGACAAGTACGAACAAGAAATA 59.827 33.333 0.00 0.00 0.00 1.40
3487 3777 4.581409 GGGAGTCAATGACTAGACCTAGAC 59.419 50.000 16.71 0.16 43.53 2.59
3488 3778 4.479056 AGGGAGTCAATGACTAGACCTAGA 59.521 45.833 23.53 0.00 43.53 2.43
3489 3779 4.582656 CAGGGAGTCAATGACTAGACCTAG 59.417 50.000 24.01 17.35 43.53 3.02
3490 3780 4.537751 CAGGGAGTCAATGACTAGACCTA 58.462 47.826 24.01 0.00 43.53 3.08
3491 3781 3.370104 CAGGGAGTCAATGACTAGACCT 58.630 50.000 16.71 19.31 43.53 3.85
3492 3782 2.432510 CCAGGGAGTCAATGACTAGACC 59.567 54.545 16.71 17.50 43.53 3.85
3514 3804 6.314648 TGTGAGTCAAGAAAGATATGCATGAC 59.685 38.462 10.16 6.32 36.77 3.06
3533 3823 3.402628 AAAGCTGTAACGGATGTGAGT 57.597 42.857 0.00 0.00 0.00 3.41
3541 3831 4.552767 GCATATGCTGTAAAGCTGTAACGG 60.553 45.833 20.64 0.00 38.21 4.44
3686 4006 5.677319 TGGATAAGTAGTGCAAGCTAAGT 57.323 39.130 0.00 0.00 0.00 2.24
3716 4036 1.569479 GCAGGACAACCGCTTGAGAC 61.569 60.000 0.00 0.00 41.83 3.36
3756 4076 9.778741 GGTTCTTTCATATGTGATAATACCAGA 57.221 33.333 1.90 0.00 33.56 3.86
3757 4077 9.784531 AGGTTCTTTCATATGTGATAATACCAG 57.215 33.333 1.90 0.00 33.56 4.00
3758 4078 9.559732 CAGGTTCTTTCATATGTGATAATACCA 57.440 33.333 1.90 0.00 33.56 3.25
3769 4089 9.132521 GATTTTGACAACAGGTTCTTTCATATG 57.867 33.333 0.00 0.00 0.00 1.78
3776 4096 5.449553 AGGAGATTTTGACAACAGGTTCTT 58.550 37.500 0.00 0.00 0.00 2.52
3786 4106 9.762933 CCAAGAAATTTAAAGGAGATTTTGACA 57.237 29.630 0.00 0.00 32.01 3.58
3787 4107 9.981114 TCCAAGAAATTTAAAGGAGATTTTGAC 57.019 29.630 0.00 0.00 32.01 3.18
3881 4201 9.780413 GATGATTTTCTTCACTCATTTAGAACC 57.220 33.333 0.00 0.00 0.00 3.62
3914 4235 8.915654 GCTTTTTGTCAATGTAAATCAGGTAAG 58.084 33.333 0.00 0.00 0.00 2.34
3933 4254 9.846248 AATATTAGTGCAGTTTAGAGCTTTTTG 57.154 29.630 0.00 0.00 0.00 2.44
3940 4261 7.491372 TCCGTGAAATATTAGTGCAGTTTAGAG 59.509 37.037 0.00 0.00 0.00 2.43
3989 4310 4.214437 GCACTCTGATCTCAAACAAAACG 58.786 43.478 0.00 0.00 0.00 3.60
4088 4409 4.010349 AGAATTCCGGTTCAGGATTTCAC 58.990 43.478 19.90 4.49 45.75 3.18
4101 4422 5.073311 TCTAACTCTTCACAGAATTCCGG 57.927 43.478 0.65 0.00 0.00 5.14
4220 4541 8.915654 CAGACTAAGAAAATTGCCAATGTTTAC 58.084 33.333 0.00 0.00 0.00 2.01
4256 4577 8.928448 ACTGACTGTATATCCAACTAATCACAT 58.072 33.333 0.00 0.00 0.00 3.21
4257 4578 8.306313 ACTGACTGTATATCCAACTAATCACA 57.694 34.615 0.00 0.00 0.00 3.58
4258 4579 9.035607 CAACTGACTGTATATCCAACTAATCAC 57.964 37.037 0.00 0.00 0.00 3.06
4259 4580 8.758829 ACAACTGACTGTATATCCAACTAATCA 58.241 33.333 0.00 0.00 0.00 2.57
4283 4604 2.568062 TGTATTGGGAAGAAGGCGTACA 59.432 45.455 0.00 0.00 0.00 2.90
4288 4609 5.921962 ATTTCTTGTATTGGGAAGAAGGC 57.078 39.130 0.00 0.00 38.94 4.35
4318 4642 5.696724 GCACACGAGCCATAAGATAATTACT 59.303 40.000 0.00 0.00 0.00 2.24
4320 4644 5.606505 TGCACACGAGCCATAAGATAATTA 58.393 37.500 0.00 0.00 0.00 1.40
4321 4645 4.450976 TGCACACGAGCCATAAGATAATT 58.549 39.130 0.00 0.00 0.00 1.40
4323 4647 3.535280 TGCACACGAGCCATAAGATAA 57.465 42.857 0.00 0.00 0.00 1.75
4325 4649 2.627515 ATGCACACGAGCCATAAGAT 57.372 45.000 0.00 0.00 0.00 2.40
4326 4650 3.751479 ATATGCACACGAGCCATAAGA 57.249 42.857 0.00 0.00 0.00 2.10
4327 4651 7.776933 ATATTATATGCACACGAGCCATAAG 57.223 36.000 0.00 0.00 0.00 1.73
4331 4655 6.280643 GGATATATTATATGCACACGAGCCA 58.719 40.000 9.58 0.00 0.00 4.75
4333 4657 6.206498 TCGGATATATTATATGCACACGAGC 58.794 40.000 13.56 0.00 0.00 5.03
4334 4658 7.097006 CGTTCGGATATATTATATGCACACGAG 60.097 40.741 20.24 5.38 0.00 4.18
4335 4659 6.689669 CGTTCGGATATATTATATGCACACGA 59.310 38.462 20.24 11.63 0.00 4.35
4337 4661 6.254804 TGCGTTCGGATATATTATATGCACAC 59.745 38.462 13.56 8.82 0.00 3.82
4338 4662 6.334202 TGCGTTCGGATATATTATATGCACA 58.666 36.000 13.56 0.00 0.00 4.57
4342 4666 7.915923 ACTCACTGCGTTCGGATATATTATATG 59.084 37.037 0.84 0.00 0.00 1.78
4343 4667 7.997482 ACTCACTGCGTTCGGATATATTATAT 58.003 34.615 0.00 0.00 0.00 0.86
4347 4671 4.585955 ACTCACTGCGTTCGGATATATT 57.414 40.909 0.00 0.00 0.00 1.28
4348 4672 4.585955 AACTCACTGCGTTCGGATATAT 57.414 40.909 0.00 0.00 0.00 0.86
4387 4788 6.687081 TTTTACAGTGTTTTAGTGACAGGG 57.313 37.500 0.00 0.00 33.76 4.45
4423 4824 3.190535 ACAAATACATCAGGCGGTGTTTC 59.809 43.478 0.92 0.00 0.00 2.78
4425 4826 2.790433 ACAAATACATCAGGCGGTGTT 58.210 42.857 0.92 0.00 0.00 3.32
4426 4827 2.489938 ACAAATACATCAGGCGGTGT 57.510 45.000 1.28 1.28 0.00 4.16
4427 4828 4.955925 TTAACAAATACATCAGGCGGTG 57.044 40.909 0.00 0.00 0.00 4.94
4428 4829 5.296780 CAGATTAACAAATACATCAGGCGGT 59.703 40.000 0.00 0.00 0.00 5.68
4429 4830 5.296780 ACAGATTAACAAATACATCAGGCGG 59.703 40.000 0.00 0.00 0.00 6.13
4430 4831 6.037062 TGACAGATTAACAAATACATCAGGCG 59.963 38.462 0.00 0.00 0.00 5.52
4432 4833 7.923888 CCTGACAGATTAACAAATACATCAGG 58.076 38.462 3.32 0.00 42.46 3.86
4434 4835 9.952030 TTACCTGACAGATTAACAAATACATCA 57.048 29.630 3.32 0.00 0.00 3.07
4436 4837 9.396022 CCTTACCTGACAGATTAACAAATACAT 57.604 33.333 3.32 0.00 0.00 2.29
4437 4838 7.335924 GCCTTACCTGACAGATTAACAAATACA 59.664 37.037 3.32 0.00 0.00 2.29
4438 4839 7.553044 AGCCTTACCTGACAGATTAACAAATAC 59.447 37.037 3.32 0.00 0.00 1.89
4556 4957 1.587547 GAATCATCTGAACTCGGGCC 58.412 55.000 0.00 0.00 0.00 5.80
4828 5231 1.200948 GCCTCAAGCACTCCAAACATC 59.799 52.381 0.00 0.00 42.97 3.06
4891 5294 8.417106 GGAGAATCTGTAGACACATATGAGAAA 58.583 37.037 10.38 0.00 33.14 2.52
4905 5308 4.932200 AGCGTCAAAAAGGAGAATCTGTAG 59.068 41.667 0.00 0.00 33.73 2.74
4969 5372 4.984295 TCACATCAGGAGAAACAAATGGA 58.016 39.130 0.00 0.00 0.00 3.41
5383 5786 2.521708 GGCACTGGGGCAACAACT 60.522 61.111 0.00 0.00 42.77 3.16
5588 5997 1.144093 TGAACTTGAACCCGGTGGAAT 59.856 47.619 0.00 0.00 34.81 3.01
5604 6013 3.181486 TGGTCGATGACTCATAGCTGAAC 60.181 47.826 0.00 0.00 32.47 3.18
5606 6015 2.620585 CTGGTCGATGACTCATAGCTGA 59.379 50.000 0.00 0.00 32.47 4.26
5738 6207 1.743995 GATTTGACCCCGGTGGACG 60.744 63.158 15.08 0.00 43.80 4.79
5739 6208 1.378119 GGATTTGACCCCGGTGGAC 60.378 63.158 15.08 9.73 38.00 4.02
5740 6209 1.847798 CTGGATTTGACCCCGGTGGA 61.848 60.000 15.08 0.00 38.00 4.02
5741 6210 1.378514 CTGGATTTGACCCCGGTGG 60.379 63.158 0.00 3.72 41.37 4.61
5742 6211 2.046285 GCTGGATTTGACCCCGGTG 61.046 63.158 0.00 0.00 0.00 4.94
5743 6212 0.912487 TAGCTGGATTTGACCCCGGT 60.912 55.000 0.00 0.00 0.00 5.28
5744 6213 0.474184 ATAGCTGGATTTGACCCCGG 59.526 55.000 0.00 0.00 0.00 5.73
5745 6214 1.140852 TCATAGCTGGATTTGACCCCG 59.859 52.381 0.00 0.00 0.00 5.73
5746 6215 2.173569 ACTCATAGCTGGATTTGACCCC 59.826 50.000 0.00 0.00 0.00 4.95
5747 6216 3.118261 TGACTCATAGCTGGATTTGACCC 60.118 47.826 0.00 0.00 0.00 4.46
5748 6217 4.142609 TGACTCATAGCTGGATTTGACC 57.857 45.455 0.00 0.00 0.00 4.02
5749 6218 4.754114 GGATGACTCATAGCTGGATTTGAC 59.246 45.833 0.00 0.00 0.00 3.18
5750 6219 4.409901 TGGATGACTCATAGCTGGATTTGA 59.590 41.667 0.00 0.00 0.00 2.69
5751 6220 4.514441 GTGGATGACTCATAGCTGGATTTG 59.486 45.833 0.00 0.00 0.00 2.32
5752 6221 4.445448 GGTGGATGACTCATAGCTGGATTT 60.445 45.833 0.00 0.00 0.00 2.17
5753 6222 3.072184 GGTGGATGACTCATAGCTGGATT 59.928 47.826 0.00 0.00 0.00 3.01
5754 6223 2.636893 GGTGGATGACTCATAGCTGGAT 59.363 50.000 0.00 0.00 0.00 3.41
5755 6224 2.042464 GGTGGATGACTCATAGCTGGA 58.958 52.381 0.00 0.00 0.00 3.86
5756 6225 1.269988 CGGTGGATGACTCATAGCTGG 60.270 57.143 0.00 0.00 0.00 4.85
5757 6226 1.269988 CCGGTGGATGACTCATAGCTG 60.270 57.143 0.00 0.00 0.00 4.24
5758 6227 1.043816 CCGGTGGATGACTCATAGCT 58.956 55.000 0.00 0.00 0.00 3.32
5759 6228 0.034059 CCCGGTGGATGACTCATAGC 59.966 60.000 0.00 0.00 0.00 2.97
5760 6229 1.414158 ACCCGGTGGATGACTCATAG 58.586 55.000 0.00 0.00 34.81 2.23
5761 6230 1.760613 GAACCCGGTGGATGACTCATA 59.239 52.381 0.00 0.00 34.81 2.15
5762 6231 0.541863 GAACCCGGTGGATGACTCAT 59.458 55.000 0.00 0.00 34.81 2.90
5763 6232 0.834261 TGAACCCGGTGGATGACTCA 60.834 55.000 0.00 0.00 34.81 3.41
5764 6233 0.323629 TTGAACCCGGTGGATGACTC 59.676 55.000 0.00 0.00 34.81 3.36
5765 6234 0.768622 TTTGAACCCGGTGGATGACT 59.231 50.000 0.00 0.00 34.81 3.41
5766 6235 1.743394 GATTTGAACCCGGTGGATGAC 59.257 52.381 0.00 0.00 34.81 3.06
5767 6236 1.340600 GGATTTGAACCCGGTGGATGA 60.341 52.381 0.00 0.00 34.81 2.92
5768 6237 1.102978 GGATTTGAACCCGGTGGATG 58.897 55.000 0.00 0.00 34.81 3.51
5769 6238 0.701731 TGGATTTGAACCCGGTGGAT 59.298 50.000 0.00 0.00 34.81 3.41
5770 6239 0.037590 CTGGATTTGAACCCGGTGGA 59.962 55.000 0.00 0.00 34.81 4.02
5771 6240 1.595093 GCTGGATTTGAACCCGGTGG 61.595 60.000 0.00 0.00 37.80 4.61
5772 6241 0.609131 AGCTGGATTTGAACCCGGTG 60.609 55.000 0.00 0.00 0.00 4.94
5773 6242 0.988832 TAGCTGGATTTGAACCCGGT 59.011 50.000 0.00 0.00 0.00 5.28
5774 6243 1.949525 CATAGCTGGATTTGAACCCGG 59.050 52.381 0.00 0.00 0.00 5.73
5775 6244 2.874701 CTCATAGCTGGATTTGAACCCG 59.125 50.000 0.00 0.00 0.00 5.28
5776 6245 3.879892 GACTCATAGCTGGATTTGAACCC 59.120 47.826 0.00 0.00 0.00 4.11
5777 6246 4.517285 TGACTCATAGCTGGATTTGAACC 58.483 43.478 0.00 0.00 0.00 3.62
5778 6247 5.238214 GGATGACTCATAGCTGGATTTGAAC 59.762 44.000 0.00 0.00 0.00 3.18
5779 6248 5.104402 TGGATGACTCATAGCTGGATTTGAA 60.104 40.000 0.00 0.00 0.00 2.69
5780 6249 4.409901 TGGATGACTCATAGCTGGATTTGA 59.590 41.667 0.00 0.00 0.00 2.69
5781 6250 4.711399 TGGATGACTCATAGCTGGATTTG 58.289 43.478 0.00 0.00 0.00 2.32
5782 6251 5.579753 ATGGATGACTCATAGCTGGATTT 57.420 39.130 0.00 0.00 0.00 2.17
5783 6252 5.314529 CAATGGATGACTCATAGCTGGATT 58.685 41.667 0.00 0.00 0.00 3.01
5784 6253 4.263374 CCAATGGATGACTCATAGCTGGAT 60.263 45.833 0.00 0.00 0.00 3.41
5785 6254 3.072038 CCAATGGATGACTCATAGCTGGA 59.928 47.826 0.00 0.00 0.00 3.86
5786 6255 3.409570 CCAATGGATGACTCATAGCTGG 58.590 50.000 0.00 0.00 0.00 4.85
5958 6427 3.159472 TGCTGTTCAAATGATTCCTGCT 58.841 40.909 0.00 0.00 0.00 4.24
5977 6446 0.968405 TTCCAAACTGCCTTCCATGC 59.032 50.000 0.00 0.00 0.00 4.06
6012 6481 6.184789 TCAATACCATTAGTTTGGGGAGTTC 58.815 40.000 0.00 0.00 41.35 3.01
6013 6482 6.147437 TCAATACCATTAGTTTGGGGAGTT 57.853 37.500 0.00 0.00 41.35 3.01
6014 6483 5.789574 TCAATACCATTAGTTTGGGGAGT 57.210 39.130 0.00 0.00 41.35 3.85
6079 6548 1.331214 CACATGGTCTTGTTGGCCTT 58.669 50.000 3.32 0.00 42.07 4.35
6199 6668 8.691661 TTCTGCTGTCTAACTTTATCCTTTTT 57.308 30.769 0.00 0.00 0.00 1.94
6301 6770 5.447279 GGTGTCTGCAATATTTACTGAACCG 60.447 44.000 0.00 0.00 0.00 4.44
6323 6792 1.462238 AACAGGACAGGGAGCTGGT 60.462 57.895 0.00 0.00 0.00 4.00
6461 6930 9.132521 CCACAATTAAGTGCTTCAATAAAGAAG 57.867 33.333 2.17 0.00 46.06 2.85
6462 6931 7.598493 GCCACAATTAAGTGCTTCAATAAAGAA 59.402 33.333 2.17 0.00 38.18 2.52
6463 6932 7.039784 AGCCACAATTAAGTGCTTCAATAAAGA 60.040 33.333 2.17 0.00 38.18 2.52
6464 6933 7.092716 AGCCACAATTAAGTGCTTCAATAAAG 58.907 34.615 2.17 0.00 38.18 1.85
6465 6934 6.991938 AGCCACAATTAAGTGCTTCAATAAA 58.008 32.000 2.17 0.00 38.18 1.40
6482 6951 1.541147 GCAGCATGAAACTAGCCACAA 59.459 47.619 0.00 0.00 39.69 3.33
6504 6974 4.608948 AAACCAGAACAGTCTCCACTAG 57.391 45.455 0.00 0.00 28.78 2.57
6611 7081 9.724839 TTCCTTTGTTGTCTAATTAAGTTTTCG 57.275 29.630 0.00 0.00 0.00 3.46
6736 7256 9.548631 AGGAAGTACTATGCACTATATTATGGT 57.451 33.333 0.00 0.00 0.00 3.55
6754 7274 9.603298 CCGACTAAATTAAAACAAAGGAAGTAC 57.397 33.333 0.00 0.00 0.00 2.73
6779 7299 5.532406 TGACCTCAATGAAAGCTATTATGCC 59.468 40.000 0.00 0.00 0.00 4.40
6785 7305 7.530426 AAAGTTTGACCTCAATGAAAGCTAT 57.470 32.000 0.00 0.00 35.55 2.97
6994 7525 7.042335 ACTTCACAAAATATCTACTTCCTCCG 58.958 38.462 0.00 0.00 0.00 4.63
7121 7652 9.747898 ATAGAAAACCATGAACCTTTACATACA 57.252 29.630 0.00 0.00 0.00 2.29
7216 7747 6.546395 CCAGAACATGATTTACTTTCTTCCG 58.454 40.000 0.00 0.00 0.00 4.30
7275 7834 6.592607 TCCGTATGTAGTTTCTTGTTGGAATC 59.407 38.462 0.00 0.00 0.00 2.52
7287 7846 5.938125 AGTCATTTTGCTCCGTATGTAGTTT 59.062 36.000 0.00 0.00 0.00 2.66
7288 7847 5.351465 CAGTCATTTTGCTCCGTATGTAGTT 59.649 40.000 0.00 0.00 0.00 2.24
7353 7912 9.274206 GTCTTTTAGAGGTTTCAAACAGACTAT 57.726 33.333 1.93 0.00 0.00 2.12
7354 7913 8.483758 AGTCTTTTAGAGGTTTCAAACAGACTA 58.516 33.333 12.99 6.02 0.00 2.59
7355 7914 7.339482 AGTCTTTTAGAGGTTTCAAACAGACT 58.661 34.615 10.07 10.07 0.00 3.24
7356 7915 7.555306 AGTCTTTTAGAGGTTTCAAACAGAC 57.445 36.000 1.93 4.75 0.00 3.51
7357 7916 9.847224 ATAAGTCTTTTAGAGGTTTCAAACAGA 57.153 29.630 1.93 0.00 0.00 3.41
7388 7950 8.661345 AGATAAAAGTCTACTCCCTCTGTTTTT 58.339 33.333 0.00 0.00 0.00 1.94
7389 7951 8.208575 AGATAAAAGTCTACTCCCTCTGTTTT 57.791 34.615 0.00 0.00 0.00 2.43
7394 7956 5.134661 CCGAGATAAAAGTCTACTCCCTCT 58.865 45.833 0.00 0.00 0.00 3.69
7406 7968 3.313526 CCCATGCAAGACCGAGATAAAAG 59.686 47.826 0.00 0.00 0.00 2.27
7411 7973 0.179000 GACCCATGCAAGACCGAGAT 59.821 55.000 0.00 0.00 0.00 2.75
7416 7978 4.002797 GGTGACCCATGCAAGACC 57.997 61.111 0.00 0.00 0.00 3.85
7439 8001 1.368850 GTGTTTGTTCCTCGTGCGC 60.369 57.895 0.00 0.00 0.00 6.09
7442 8004 3.798506 CACGTGTTTGTTCCTCGTG 57.201 52.632 7.58 0.00 43.77 4.35
7448 8010 2.286184 ACGAGAATGCACGTGTTTGTTC 60.286 45.455 18.38 15.00 39.80 3.18
7468 8030 6.467723 AAAAACATGTAGACGTCTCATGAC 57.532 37.500 36.96 26.42 40.64 3.06
7477 8039 4.768145 TGCTTTCGAAAAACATGTAGACG 58.232 39.130 12.41 3.58 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.