Multiple sequence alignment - TraesCS2A01G491800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G491800 chr2A 100.000 2197 0 0 731 2927 724425820 724423624 0.000000e+00 4058.0
1 TraesCS2A01G491800 chr2A 85.847 968 104 22 971 1921 724417752 724416801 0.000000e+00 998.0
2 TraesCS2A01G491800 chr2A 81.960 959 157 11 973 1930 724380604 724381547 0.000000e+00 798.0
3 TraesCS2A01G491800 chr2A 100.000 432 0 0 1 432 724426550 724426119 0.000000e+00 798.0
4 TraesCS2A01G491800 chr2A 78.873 639 108 16 1312 1931 755679914 755679284 9.770000e-110 407.0
5 TraesCS2A01G491800 chr2D 92.282 1218 75 16 733 1942 590092201 590090995 0.000000e+00 1711.0
6 TraesCS2A01G491800 chr2D 85.569 984 106 22 971 1942 590086990 590086031 0.000000e+00 998.0
7 TraesCS2A01G491800 chr2D 80.267 1125 181 29 825 1929 590080895 590081998 0.000000e+00 809.0
8 TraesCS2A01G491800 chr2D 81.115 969 152 21 973 1930 590074963 590075911 0.000000e+00 747.0
9 TraesCS2A01G491800 chr2B 91.961 1219 60 12 731 1944 714523594 714522409 0.000000e+00 1674.0
10 TraesCS2A01G491800 chr2B 84.933 969 122 14 971 1936 714519330 714518383 0.000000e+00 959.0
11 TraesCS2A01G491800 chr2B 82.803 942 134 15 999 1929 714502193 714503117 0.000000e+00 817.0
12 TraesCS2A01G491800 chr7D 73.889 923 185 40 997 1903 580479404 580478522 4.710000e-83 318.0
13 TraesCS2A01G491800 chr5D 96.491 114 2 2 320 432 503326870 503326758 1.380000e-43 187.0
14 TraesCS2A01G491800 chr5D 94.737 114 4 2 320 432 6239925 6240037 3.000000e-40 176.0
15 TraesCS2A01G491800 chr6D 96.460 113 3 1 320 432 87402946 87402835 4.980000e-43 185.0
16 TraesCS2A01G491800 chrUn 95.652 115 2 3 320 432 30305059 30305172 6.440000e-42 182.0
17 TraesCS2A01G491800 chr5A 96.364 110 3 1 320 429 31294029 31294137 2.320000e-41 180.0
18 TraesCS2A01G491800 chr4A 95.575 113 4 1 320 432 94989353 94989464 2.320000e-41 180.0
19 TraesCS2A01G491800 chr1D 95.575 113 3 2 320 432 206330847 206330737 2.320000e-41 180.0
20 TraesCS2A01G491800 chr1D 95.575 113 3 2 320 432 254472776 254472666 2.320000e-41 180.0
21 TraesCS2A01G491800 chr1D 100.000 28 0 0 2280 2307 180954556 180954583 5.000000e-03 52.8
22 TraesCS2A01G491800 chr1A 95.575 113 4 1 320 432 554451853 554451964 2.320000e-41 180.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G491800 chr2A 724423624 724426550 2926 True 2428.0 4058 100.000 1 2927 2 chr2A.!!$R3 2926
1 TraesCS2A01G491800 chr2A 724416801 724417752 951 True 998.0 998 85.847 971 1921 1 chr2A.!!$R1 950
2 TraesCS2A01G491800 chr2A 724380604 724381547 943 False 798.0 798 81.960 973 1930 1 chr2A.!!$F1 957
3 TraesCS2A01G491800 chr2A 755679284 755679914 630 True 407.0 407 78.873 1312 1931 1 chr2A.!!$R2 619
4 TraesCS2A01G491800 chr2D 590090995 590092201 1206 True 1711.0 1711 92.282 733 1942 1 chr2D.!!$R2 1209
5 TraesCS2A01G491800 chr2D 590086031 590086990 959 True 998.0 998 85.569 971 1942 1 chr2D.!!$R1 971
6 TraesCS2A01G491800 chr2D 590080895 590081998 1103 False 809.0 809 80.267 825 1929 1 chr2D.!!$F2 1104
7 TraesCS2A01G491800 chr2D 590074963 590075911 948 False 747.0 747 81.115 973 1930 1 chr2D.!!$F1 957
8 TraesCS2A01G491800 chr2B 714518383 714523594 5211 True 1316.5 1674 88.447 731 1944 2 chr2B.!!$R1 1213
9 TraesCS2A01G491800 chr2B 714502193 714503117 924 False 817.0 817 82.803 999 1929 1 chr2B.!!$F1 930
10 TraesCS2A01G491800 chr7D 580478522 580479404 882 True 318.0 318 73.889 997 1903 1 chr7D.!!$R1 906

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 289 0.034756 GAAAATTTGTTGGGCCGGCT 59.965 50.0 28.56 0.0 0.0 5.52 F
875 889 0.036732 ACGTGCCATGACTTGTCCAT 59.963 50.0 0.00 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1807 1888 0.108138 AGAAGAGCATACACGGCCAC 60.108 55.0 2.24 0.0 0.00 5.01 R
2834 5440 0.036306 CACCTGGAGTACCCCAACAC 59.964 60.0 0.00 0.0 35.47 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 9.755804 TGTTGCATAGTTCAAAAATAATGTTGA 57.244 25.926 0.00 0.00 31.99 3.18
55 56 8.446489 TGCATAGTTCAAAAATAATGTTGACG 57.554 30.769 0.00 0.00 33.58 4.35
56 57 7.540400 TGCATAGTTCAAAAATAATGTTGACGG 59.460 33.333 0.00 0.00 33.58 4.79
57 58 7.462724 GCATAGTTCAAAAATAATGTTGACGGC 60.463 37.037 0.00 0.00 33.58 5.68
58 59 5.837437 AGTTCAAAAATAATGTTGACGGCA 58.163 33.333 0.00 0.00 33.58 5.69
59 60 6.454795 AGTTCAAAAATAATGTTGACGGCAT 58.545 32.000 0.00 0.00 33.58 4.40
60 61 7.598278 AGTTCAAAAATAATGTTGACGGCATA 58.402 30.769 0.00 0.00 33.58 3.14
61 62 8.250332 AGTTCAAAAATAATGTTGACGGCATAT 58.750 29.630 0.00 0.00 33.58 1.78
62 63 9.509855 GTTCAAAAATAATGTTGACGGCATATA 57.490 29.630 0.00 0.00 33.58 0.86
191 192 9.665719 AAATTAAAACTGAAAGGAAAAGCAGAA 57.334 25.926 0.00 0.00 39.30 3.02
192 193 9.665719 AATTAAAACTGAAAGGAAAAGCAGAAA 57.334 25.926 0.00 0.00 39.30 2.52
193 194 9.665719 ATTAAAACTGAAAGGAAAAGCAGAAAA 57.334 25.926 0.00 0.00 39.30 2.29
194 195 7.977789 AAAACTGAAAGGAAAAGCAGAAAAA 57.022 28.000 0.00 0.00 39.30 1.94
217 218 9.987272 AAAAAGAAAAGATAAACTGGATGGAAG 57.013 29.630 0.00 0.00 0.00 3.46
218 219 8.940397 AAAGAAAAGATAAACTGGATGGAAGA 57.060 30.769 0.00 0.00 0.00 2.87
219 220 8.572855 AAGAAAAGATAAACTGGATGGAAGAG 57.427 34.615 0.00 0.00 0.00 2.85
220 221 7.694093 AGAAAAGATAAACTGGATGGAAGAGT 58.306 34.615 0.00 0.00 0.00 3.24
221 222 7.826744 AGAAAAGATAAACTGGATGGAAGAGTC 59.173 37.037 0.00 0.00 0.00 3.36
222 223 5.622346 AGATAAACTGGATGGAAGAGTCC 57.378 43.478 0.00 0.00 45.21 3.85
223 224 5.284582 AGATAAACTGGATGGAAGAGTCCT 58.715 41.667 0.00 0.00 45.22 3.85
224 225 3.710209 AAACTGGATGGAAGAGTCCTG 57.290 47.619 0.00 0.00 45.22 3.86
225 226 2.630889 ACTGGATGGAAGAGTCCTGA 57.369 50.000 5.47 0.00 45.22 3.86
226 227 2.907892 ACTGGATGGAAGAGTCCTGAA 58.092 47.619 5.47 0.00 45.22 3.02
227 228 3.251484 ACTGGATGGAAGAGTCCTGAAA 58.749 45.455 5.47 0.00 45.22 2.69
228 229 3.008485 ACTGGATGGAAGAGTCCTGAAAC 59.992 47.826 5.47 0.00 45.22 2.78
229 230 2.305927 TGGATGGAAGAGTCCTGAAACC 59.694 50.000 0.00 0.00 45.22 3.27
230 231 2.622436 GATGGAAGAGTCCTGAAACCG 58.378 52.381 0.00 0.00 45.22 4.44
231 232 0.034896 TGGAAGAGTCCTGAAACCGC 59.965 55.000 0.00 0.00 45.22 5.68
232 233 0.321996 GGAAGAGTCCTGAAACCGCT 59.678 55.000 0.00 0.00 41.24 5.52
233 234 1.433534 GAAGAGTCCTGAAACCGCTG 58.566 55.000 0.00 0.00 0.00 5.18
234 235 0.603975 AAGAGTCCTGAAACCGCTGC 60.604 55.000 0.00 0.00 0.00 5.25
235 236 1.301716 GAGTCCTGAAACCGCTGCA 60.302 57.895 0.00 0.00 0.00 4.41
236 237 1.294659 GAGTCCTGAAACCGCTGCAG 61.295 60.000 10.11 10.11 0.00 4.41
237 238 1.301716 GTCCTGAAACCGCTGCAGA 60.302 57.895 20.43 0.00 0.00 4.26
238 239 0.884704 GTCCTGAAACCGCTGCAGAA 60.885 55.000 20.43 0.00 0.00 3.02
239 240 0.179032 TCCTGAAACCGCTGCAGAAA 60.179 50.000 20.43 0.00 0.00 2.52
240 241 0.239347 CCTGAAACCGCTGCAGAAAG 59.761 55.000 20.43 7.24 0.00 2.62
241 242 0.239347 CTGAAACCGCTGCAGAAAGG 59.761 55.000 20.43 18.93 0.00 3.11
242 243 0.465460 TGAAACCGCTGCAGAAAGGT 60.465 50.000 20.43 19.61 38.88 3.50
243 244 4.579127 AACCGCTGCAGAAAGGTT 57.421 50.000 25.91 25.91 41.66 3.50
244 245 2.807247 AACCGCTGCAGAAAGGTTT 58.193 47.368 25.91 15.51 43.72 3.27
245 246 0.668535 AACCGCTGCAGAAAGGTTTC 59.331 50.000 25.91 5.06 43.72 2.78
246 247 1.172812 ACCGCTGCAGAAAGGTTTCC 61.173 55.000 20.43 0.00 37.92 3.13
247 248 1.172180 CCGCTGCAGAAAGGTTTCCA 61.172 55.000 20.43 0.00 37.92 3.53
248 249 0.667993 CGCTGCAGAAAGGTTTCCAA 59.332 50.000 20.43 0.00 37.92 3.53
249 250 1.066908 CGCTGCAGAAAGGTTTCCAAA 59.933 47.619 20.43 0.00 37.92 3.28
250 251 2.473816 GCTGCAGAAAGGTTTCCAAAC 58.526 47.619 20.43 0.00 37.92 2.93
265 266 7.311364 GTTTCCAAACCTTTTCCTAAAAACC 57.689 36.000 0.00 0.00 32.82 3.27
266 267 5.265350 TCCAAACCTTTTCCTAAAAACCG 57.735 39.130 0.00 0.00 31.23 4.44
267 268 4.710865 TCCAAACCTTTTCCTAAAAACCGT 59.289 37.500 0.00 0.00 31.23 4.83
268 269 4.806775 CCAAACCTTTTCCTAAAAACCGTG 59.193 41.667 0.00 0.00 31.23 4.94
269 270 4.659111 AACCTTTTCCTAAAAACCGTGG 57.341 40.909 0.00 0.00 31.23 4.94
270 271 3.900971 ACCTTTTCCTAAAAACCGTGGA 58.099 40.909 0.00 0.00 31.23 4.02
271 272 4.279982 ACCTTTTCCTAAAAACCGTGGAA 58.720 39.130 0.00 0.00 36.87 3.53
272 273 4.710865 ACCTTTTCCTAAAAACCGTGGAAA 59.289 37.500 0.00 0.00 44.00 3.13
277 278 7.541122 TTTCCTAAAAACCGTGGAAAATTTG 57.459 32.000 0.00 0.00 43.12 2.32
278 279 6.223351 TCCTAAAAACCGTGGAAAATTTGT 57.777 33.333 0.00 0.00 0.00 2.83
279 280 6.641474 TCCTAAAAACCGTGGAAAATTTGTT 58.359 32.000 0.00 0.00 0.00 2.83
280 281 6.535508 TCCTAAAAACCGTGGAAAATTTGTTG 59.464 34.615 0.00 0.00 0.00 3.33
281 282 5.553290 AAAAACCGTGGAAAATTTGTTGG 57.447 34.783 0.00 0.00 0.00 3.77
282 283 2.900716 ACCGTGGAAAATTTGTTGGG 57.099 45.000 0.00 0.00 0.00 4.12
283 284 1.202592 ACCGTGGAAAATTTGTTGGGC 60.203 47.619 0.00 0.00 0.00 5.36
284 285 1.507562 CGTGGAAAATTTGTTGGGCC 58.492 50.000 0.00 0.00 0.00 5.80
285 286 1.507562 GTGGAAAATTTGTTGGGCCG 58.492 50.000 0.00 0.00 0.00 6.13
286 287 0.394565 TGGAAAATTTGTTGGGCCGG 59.605 50.000 0.00 0.00 0.00 6.13
287 288 0.953471 GGAAAATTTGTTGGGCCGGC 60.953 55.000 21.18 21.18 0.00 6.13
288 289 0.034756 GAAAATTTGTTGGGCCGGCT 59.965 50.000 28.56 0.00 0.00 5.52
289 290 0.034756 AAAATTTGTTGGGCCGGCTC 59.965 50.000 28.56 25.91 0.00 4.70
290 291 2.153547 AAATTTGTTGGGCCGGCTCG 62.154 55.000 28.56 0.00 0.00 5.03
291 292 3.860930 ATTTGTTGGGCCGGCTCGT 62.861 57.895 28.56 1.98 0.00 4.18
292 293 4.572571 TTGTTGGGCCGGCTCGTT 62.573 61.111 28.56 0.00 0.00 3.85
293 294 4.572571 TGTTGGGCCGGCTCGTTT 62.573 61.111 28.56 0.00 0.00 3.60
294 295 3.733960 GTTGGGCCGGCTCGTTTC 61.734 66.667 28.56 10.30 0.00 2.78
295 296 4.257654 TTGGGCCGGCTCGTTTCA 62.258 61.111 28.56 12.19 0.00 2.69
298 299 3.423154 GGCCGGCTCGTTTCACAG 61.423 66.667 28.56 0.00 0.00 3.66
299 300 2.357034 GCCGGCTCGTTTCACAGA 60.357 61.111 22.15 0.00 0.00 3.41
300 301 2.668280 GCCGGCTCGTTTCACAGAC 61.668 63.158 22.15 0.00 0.00 3.51
301 302 1.300620 CCGGCTCGTTTCACAGACA 60.301 57.895 0.00 0.00 0.00 3.41
302 303 0.670546 CCGGCTCGTTTCACAGACAT 60.671 55.000 0.00 0.00 0.00 3.06
303 304 1.403647 CCGGCTCGTTTCACAGACATA 60.404 52.381 0.00 0.00 0.00 2.29
304 305 1.654105 CGGCTCGTTTCACAGACATAC 59.346 52.381 0.00 0.00 0.00 2.39
305 306 2.000447 GGCTCGTTTCACAGACATACC 59.000 52.381 0.00 0.00 0.00 2.73
306 307 1.654105 GCTCGTTTCACAGACATACCG 59.346 52.381 0.00 0.00 0.00 4.02
307 308 1.654105 CTCGTTTCACAGACATACCGC 59.346 52.381 0.00 0.00 0.00 5.68
308 309 1.271379 TCGTTTCACAGACATACCGCT 59.729 47.619 0.00 0.00 0.00 5.52
309 310 2.066262 CGTTTCACAGACATACCGCTT 58.934 47.619 0.00 0.00 0.00 4.68
310 311 2.478894 CGTTTCACAGACATACCGCTTT 59.521 45.455 0.00 0.00 0.00 3.51
311 312 3.059188 CGTTTCACAGACATACCGCTTTT 60.059 43.478 0.00 0.00 0.00 2.27
312 313 4.219033 GTTTCACAGACATACCGCTTTTG 58.781 43.478 0.00 0.00 0.00 2.44
313 314 1.804151 TCACAGACATACCGCTTTTGC 59.196 47.619 0.00 0.00 43.23 3.68
324 325 3.275777 GCTTTTGCGCTACGAACTC 57.724 52.632 9.73 0.00 34.86 3.01
325 326 0.179222 GCTTTTGCGCTACGAACTCC 60.179 55.000 9.73 0.00 34.86 3.85
326 327 1.144969 CTTTTGCGCTACGAACTCCA 58.855 50.000 9.73 0.00 0.00 3.86
327 328 1.126846 CTTTTGCGCTACGAACTCCAG 59.873 52.381 9.73 0.00 0.00 3.86
328 329 0.669318 TTTGCGCTACGAACTCCAGG 60.669 55.000 9.73 0.00 0.00 4.45
329 330 1.529152 TTGCGCTACGAACTCCAGGA 61.529 55.000 9.73 0.00 0.00 3.86
330 331 1.320344 TGCGCTACGAACTCCAGGAT 61.320 55.000 9.73 0.00 0.00 3.24
331 332 0.595310 GCGCTACGAACTCCAGGATC 60.595 60.000 0.00 0.00 0.00 3.36
332 333 1.025812 CGCTACGAACTCCAGGATCT 58.974 55.000 0.00 0.00 0.00 2.75
333 334 1.405821 CGCTACGAACTCCAGGATCTT 59.594 52.381 0.00 0.00 0.00 2.40
334 335 2.159226 CGCTACGAACTCCAGGATCTTT 60.159 50.000 0.00 0.00 0.00 2.52
335 336 3.676324 CGCTACGAACTCCAGGATCTTTT 60.676 47.826 0.00 0.00 0.00 2.27
336 337 4.439700 CGCTACGAACTCCAGGATCTTTTA 60.440 45.833 0.00 0.00 0.00 1.52
337 338 5.602628 GCTACGAACTCCAGGATCTTTTAT 58.397 41.667 0.00 0.00 0.00 1.40
338 339 5.463724 GCTACGAACTCCAGGATCTTTTATG 59.536 44.000 0.00 0.00 0.00 1.90
339 340 5.422214 ACGAACTCCAGGATCTTTTATGT 57.578 39.130 0.00 0.00 0.00 2.29
340 341 5.805728 ACGAACTCCAGGATCTTTTATGTT 58.194 37.500 0.00 0.00 0.00 2.71
341 342 6.238648 ACGAACTCCAGGATCTTTTATGTTT 58.761 36.000 0.00 0.00 0.00 2.83
342 343 6.715264 ACGAACTCCAGGATCTTTTATGTTTT 59.285 34.615 0.00 0.00 0.00 2.43
343 344 7.230712 ACGAACTCCAGGATCTTTTATGTTTTT 59.769 33.333 0.00 0.00 0.00 1.94
797 798 3.243704 CCGTTGATTCTTTTGGCTGGAAA 60.244 43.478 0.00 0.00 0.00 3.13
798 799 4.559153 CGTTGATTCTTTTGGCTGGAAAT 58.441 39.130 0.00 0.00 0.00 2.17
799 800 4.990426 CGTTGATTCTTTTGGCTGGAAATT 59.010 37.500 0.00 0.00 0.00 1.82
808 809 5.643379 TTTGGCTGGAAATTAGTGATGTC 57.357 39.130 0.00 0.00 0.00 3.06
815 816 5.245531 TGGAAATTAGTGATGTCGAGCTTT 58.754 37.500 0.00 0.00 0.00 3.51
863 874 2.586635 GGACACAACGACGTGCCA 60.587 61.111 0.00 0.00 40.73 4.92
865 876 1.204062 GACACAACGACGTGCCATG 59.796 57.895 0.00 0.00 40.73 3.66
870 884 0.110688 CAACGACGTGCCATGACTTG 60.111 55.000 0.00 0.00 0.00 3.16
875 889 0.036732 ACGTGCCATGACTTGTCCAT 59.963 50.000 0.00 0.00 0.00 3.41
892 906 4.082463 TGTCCATTTTCTTAATTGACCGGC 60.082 41.667 0.00 0.00 0.00 6.13
942 967 0.397941 CTGCAAACCTCCTCCACAGA 59.602 55.000 0.00 0.00 0.00 3.41
943 968 0.843309 TGCAAACCTCCTCCACAGAA 59.157 50.000 0.00 0.00 0.00 3.02
944 969 1.239347 GCAAACCTCCTCCACAGAAC 58.761 55.000 0.00 0.00 0.00 3.01
945 970 1.897560 CAAACCTCCTCCACAGAACC 58.102 55.000 0.00 0.00 0.00 3.62
946 971 1.142870 CAAACCTCCTCCACAGAACCA 59.857 52.381 0.00 0.00 0.00 3.67
947 972 0.765510 AACCTCCTCCACAGAACCAC 59.234 55.000 0.00 0.00 0.00 4.16
948 973 0.399949 ACCTCCTCCACAGAACCACA 60.400 55.000 0.00 0.00 0.00 4.17
949 974 0.322975 CCTCCTCCACAGAACCACAG 59.677 60.000 0.00 0.00 0.00 3.66
1056 1110 0.641601 AGGAAGCTCTGATCCTCCCT 59.358 55.000 0.00 0.00 42.44 4.20
1057 1111 0.758123 GGAAGCTCTGATCCTCCCTG 59.242 60.000 0.00 0.00 32.75 4.45
1098 1152 1.985116 ACCCGTGCTCCTCCTCTTC 60.985 63.158 0.00 0.00 0.00 2.87
1127 1181 0.394488 GCCTTCCTTGACCCCTTAGC 60.394 60.000 0.00 0.00 0.00 3.09
1145 1199 3.095278 CCACGTCGTGTTCGTCCG 61.095 66.667 23.01 3.04 39.55 4.79
1299 1356 1.718757 GCATCACCATCGCCCAGTTC 61.719 60.000 0.00 0.00 0.00 3.01
1513 1594 1.926510 CGCTGCGTTATCAAGTGATGA 59.073 47.619 14.93 0.00 43.67 2.92
1523 1604 1.302511 AAGTGATGAGCGGCCGTTT 60.303 52.632 28.70 16.06 0.00 3.60
1736 1817 3.060866 GGCATACCTCGGGCCTAG 58.939 66.667 0.84 0.00 44.32 3.02
1807 1888 4.688419 CGGCGTGCTTGTGCTTGG 62.688 66.667 0.00 0.00 40.48 3.61
1933 2020 5.239525 GCCTTGTGGTTATGCTAAGATTAGG 59.760 44.000 2.00 0.00 35.27 2.69
1944 2031 4.783227 TGCTAAGATTAGGTTCCTTCCAGT 59.217 41.667 0.00 0.00 0.00 4.00
1945 2032 5.104900 TGCTAAGATTAGGTTCCTTCCAGTC 60.105 44.000 0.00 0.00 0.00 3.51
1976 2302 6.801539 ATATACGTGGGATTACATTTGCAG 57.198 37.500 0.00 0.00 0.00 4.41
1980 2306 3.181507 CGTGGGATTACATTTGCAGTCTG 60.182 47.826 0.00 0.00 0.00 3.51
1985 2311 4.640201 GGATTACATTTGCAGTCTGGCTAA 59.360 41.667 1.14 0.00 33.34 3.09
1991 2317 1.632589 TGCAGTCTGGCTAAGTCTCA 58.367 50.000 1.14 0.00 34.04 3.27
1992 2318 1.970640 TGCAGTCTGGCTAAGTCTCAA 59.029 47.619 1.14 0.00 34.04 3.02
1995 2321 3.791245 CAGTCTGGCTAAGTCTCAATCC 58.209 50.000 0.00 0.00 0.00 3.01
1997 2323 3.196685 AGTCTGGCTAAGTCTCAATCCAC 59.803 47.826 0.00 0.00 0.00 4.02
1998 2324 2.501723 TCTGGCTAAGTCTCAATCCACC 59.498 50.000 0.00 0.00 0.00 4.61
1999 2325 1.207089 TGGCTAAGTCTCAATCCACCG 59.793 52.381 0.00 0.00 0.00 4.94
2000 2326 1.480954 GGCTAAGTCTCAATCCACCGA 59.519 52.381 0.00 0.00 0.00 4.69
2001 2327 2.482142 GGCTAAGTCTCAATCCACCGAG 60.482 54.545 0.00 0.00 0.00 4.63
2008 2334 2.231478 TCTCAATCCACCGAGACTTCAC 59.769 50.000 0.00 0.00 33.37 3.18
2009 2335 2.232452 CTCAATCCACCGAGACTTCACT 59.768 50.000 0.00 0.00 0.00 3.41
2010 2336 3.427573 TCAATCCACCGAGACTTCACTA 58.572 45.455 0.00 0.00 0.00 2.74
2011 2337 3.830178 TCAATCCACCGAGACTTCACTAA 59.170 43.478 0.00 0.00 0.00 2.24
2012 2338 4.082190 TCAATCCACCGAGACTTCACTAAG 60.082 45.833 0.00 0.00 38.77 2.18
2032 2358 4.576216 AGTCTCAGTTGCTATATCCGTG 57.424 45.455 0.00 0.00 0.00 4.94
2034 2360 5.131067 AGTCTCAGTTGCTATATCCGTGTA 58.869 41.667 0.00 0.00 0.00 2.90
2036 2362 6.096423 AGTCTCAGTTGCTATATCCGTGTAAA 59.904 38.462 0.00 0.00 0.00 2.01
2037 2363 6.755141 GTCTCAGTTGCTATATCCGTGTAAAA 59.245 38.462 0.00 0.00 0.00 1.52
2043 2369 9.174166 AGTTGCTATATCCGTGTAAAATTTTCT 57.826 29.630 6.72 0.00 0.00 2.52
2044 2370 9.783256 GTTGCTATATCCGTGTAAAATTTTCTT 57.217 29.630 6.72 0.00 0.00 2.52
2134 4361 8.655651 TGTTAACAAATTTTGGAATCAGGAAC 57.344 30.769 5.64 6.12 34.12 3.62
2328 4625 9.816354 TTGAAATTTCTGAACTCTTTTTAAGGG 57.184 29.630 18.64 0.00 34.26 3.95
2365 4662 8.638873 TGAAATAGAAAGGAGGAAAAAGAAACC 58.361 33.333 0.00 0.00 0.00 3.27
2366 4663 6.819397 ATAGAAAGGAGGAAAAAGAAACCG 57.181 37.500 0.00 0.00 0.00 4.44
2368 4665 3.588210 AAGGAGGAAAAAGAAACCGGA 57.412 42.857 9.46 0.00 0.00 5.14
2369 4666 3.588210 AGGAGGAAAAAGAAACCGGAA 57.412 42.857 9.46 0.00 0.00 4.30
2370 4667 3.905968 AGGAGGAAAAAGAAACCGGAAA 58.094 40.909 9.46 0.00 0.00 3.13
2371 4668 4.283337 AGGAGGAAAAAGAAACCGGAAAA 58.717 39.130 9.46 0.00 0.00 2.29
2372 4669 4.712829 AGGAGGAAAAAGAAACCGGAAAAA 59.287 37.500 9.46 0.00 0.00 1.94
2400 4701 3.855255 TGGGACATGAACTTGTCAAGA 57.145 42.857 19.53 0.00 46.32 3.02
2407 4708 6.293462 GGACATGAACTTGTCAAGACCTTTAC 60.293 42.308 19.53 5.72 46.32 2.01
2430 4731 4.891992 CTTCTAGAAGGTTCCCAGAACA 57.108 45.455 22.67 0.00 34.87 3.18
2438 4739 0.110486 GTTCCCAGAACAGGAGCCAA 59.890 55.000 2.65 0.00 34.08 4.52
2440 4741 1.059584 TCCCAGAACAGGAGCCAACA 61.060 55.000 0.00 0.00 0.00 3.33
2443 4744 1.004044 CCAGAACAGGAGCCAACATCT 59.996 52.381 0.00 0.00 0.00 2.90
2450 4751 6.494835 AGAACAGGAGCCAACATCTAATTTTT 59.505 34.615 0.00 0.00 0.00 1.94
2453 4754 6.494835 ACAGGAGCCAACATCTAATTTTTCTT 59.505 34.615 0.00 0.00 0.00 2.52
2468 4769 1.829523 TTCTTGCAAATGGGCTGGCC 61.830 55.000 14.23 14.23 34.04 5.36
2484 4785 3.322466 CCCAGCTCGGTTGGTCCT 61.322 66.667 6.15 0.00 31.87 3.85
2486 4787 2.743928 CAGCTCGGTTGGTCCTGC 60.744 66.667 0.00 0.00 34.97 4.85
2487 4788 4.379243 AGCTCGGTTGGTCCTGCG 62.379 66.667 0.00 0.00 37.99 5.18
2488 4789 4.373116 GCTCGGTTGGTCCTGCGA 62.373 66.667 0.00 0.00 0.00 5.10
2490 4791 4.351938 TCGGTTGGTCCTGCGACG 62.352 66.667 0.00 0.00 40.17 5.12
2491 4792 4.351938 CGGTTGGTCCTGCGACGA 62.352 66.667 0.00 0.00 40.17 4.20
2493 4794 3.103911 GTTGGTCCTGCGACGACG 61.104 66.667 2.12 2.12 40.17 5.12
2503 4804 4.792125 CGACGACGCAAAAACTCC 57.208 55.556 0.00 0.00 0.00 3.85
2504 4805 1.203313 CGACGACGCAAAAACTCCC 59.797 57.895 0.00 0.00 0.00 4.30
2505 4806 1.203313 GACGACGCAAAAACTCCCG 59.797 57.895 0.00 0.00 0.00 5.14
2506 4807 1.216941 GACGACGCAAAAACTCCCGA 61.217 55.000 0.00 0.00 0.00 5.14
2507 4808 1.203313 CGACGCAAAAACTCCCGAC 59.797 57.895 0.00 0.00 0.00 4.79
2508 4809 1.492319 CGACGCAAAAACTCCCGACA 61.492 55.000 0.00 0.00 0.00 4.35
2534 4835 4.740822 CTGGCCTTCCAACCCGGG 62.741 72.222 22.25 22.25 42.91 5.73
2538 4839 4.778143 CCTTCCAACCCGGGCTCG 62.778 72.222 24.08 9.20 34.36 5.03
2539 4840 4.016706 CTTCCAACCCGGGCTCGT 62.017 66.667 24.08 0.00 34.36 4.18
2540 4841 3.952628 CTTCCAACCCGGGCTCGTC 62.953 68.421 24.08 0.00 34.36 4.20
2542 4843 4.760047 CCAACCCGGGCTCGTCTG 62.760 72.222 24.08 8.35 33.95 3.51
2543 4844 4.003788 CAACCCGGGCTCGTCTGT 62.004 66.667 24.08 0.00 33.95 3.41
2544 4845 3.239253 AACCCGGGCTCGTCTGTT 61.239 61.111 24.08 0.49 33.95 3.16
2545 4846 3.530910 AACCCGGGCTCGTCTGTTG 62.531 63.158 24.08 0.00 33.95 3.33
2546 4847 4.760047 CCCGGGCTCGTCTGTTGG 62.760 72.222 8.08 0.00 33.95 3.77
2549 4850 2.032681 GGGCTCGTCTGTTGGCTT 59.967 61.111 0.00 0.00 0.00 4.35
2550 4851 2.328099 GGGCTCGTCTGTTGGCTTG 61.328 63.158 0.00 0.00 0.00 4.01
2551 4852 2.558313 GCTCGTCTGTTGGCTTGC 59.442 61.111 0.00 0.00 0.00 4.01
2552 4853 2.970974 GCTCGTCTGTTGGCTTGCC 61.971 63.158 4.43 4.43 0.00 4.52
2553 4854 1.597854 CTCGTCTGTTGGCTTGCCA 60.598 57.895 10.65 10.65 0.00 4.92
2554 4855 0.957395 CTCGTCTGTTGGCTTGCCAT 60.957 55.000 15.58 0.00 0.00 4.40
2555 4856 0.537143 TCGTCTGTTGGCTTGCCATT 60.537 50.000 15.58 0.00 0.00 3.16
2556 4857 0.109597 CGTCTGTTGGCTTGCCATTC 60.110 55.000 15.58 11.83 0.00 2.67
2557 4858 1.251251 GTCTGTTGGCTTGCCATTCT 58.749 50.000 15.58 0.00 0.00 2.40
2558 4859 1.068055 GTCTGTTGGCTTGCCATTCTG 60.068 52.381 15.58 14.20 0.00 3.02
2559 4860 1.202915 TCTGTTGGCTTGCCATTCTGA 60.203 47.619 15.58 15.94 0.00 3.27
2560 4861 0.961019 TGTTGGCTTGCCATTCTGAC 59.039 50.000 15.58 10.43 0.00 3.51
2561 4862 0.244721 GTTGGCTTGCCATTCTGACC 59.755 55.000 15.58 0.00 0.00 4.02
2565 4866 1.466856 GCTTGCCATTCTGACCATCA 58.533 50.000 0.00 0.00 0.00 3.07
2566 4867 1.133790 GCTTGCCATTCTGACCATCAC 59.866 52.381 0.00 0.00 0.00 3.06
2567 4868 1.747355 CTTGCCATTCTGACCATCACC 59.253 52.381 0.00 0.00 0.00 4.02
2568 4869 0.034186 TGCCATTCTGACCATCACCC 60.034 55.000 0.00 0.00 0.00 4.61
2569 4870 0.753111 GCCATTCTGACCATCACCCC 60.753 60.000 0.00 0.00 0.00 4.95
2570 4871 0.921896 CCATTCTGACCATCACCCCT 59.078 55.000 0.00 0.00 0.00 4.79
2571 4872 1.133976 CCATTCTGACCATCACCCCTC 60.134 57.143 0.00 0.00 0.00 4.30
2572 4873 1.133976 CATTCTGACCATCACCCCTCC 60.134 57.143 0.00 0.00 0.00 4.30
2573 4874 0.914417 TTCTGACCATCACCCCTCCC 60.914 60.000 0.00 0.00 0.00 4.30
2577 4878 1.003573 ACCATCACCCCTCCCTCTC 59.996 63.158 0.00 0.00 0.00 3.20
2579 4880 2.136878 CATCACCCCTCCCTCTCCG 61.137 68.421 0.00 0.00 0.00 4.63
2580 4881 3.396822 ATCACCCCTCCCTCTCCGG 62.397 68.421 0.00 0.00 0.00 5.14
2584 4885 4.888325 CCCTCCCTCTCCGGCCAT 62.888 72.222 2.24 0.00 0.00 4.40
2585 4886 3.554342 CCTCCCTCTCCGGCCATG 61.554 72.222 2.24 0.00 0.00 3.66
2586 4887 4.247380 CTCCCTCTCCGGCCATGC 62.247 72.222 2.24 0.00 0.00 4.06
2600 4901 3.706373 ATGCCGTGGTCGCCTTCT 61.706 61.111 0.00 0.00 35.54 2.85
2603 4904 2.677979 GCCGTGGTCGCCTTCTTTC 61.678 63.158 0.00 0.00 35.54 2.62
2604 4905 2.033194 CCGTGGTCGCCTTCTTTCC 61.033 63.158 0.00 0.00 35.54 3.13
2605 4906 1.004918 CGTGGTCGCCTTCTTTCCT 60.005 57.895 0.00 0.00 0.00 3.36
2606 4907 1.014564 CGTGGTCGCCTTCTTTCCTC 61.015 60.000 0.00 0.00 0.00 3.71
2608 4909 0.836400 TGGTCGCCTTCTTTCCTCCT 60.836 55.000 0.00 0.00 0.00 3.69
2609 4910 0.325272 GGTCGCCTTCTTTCCTCCTT 59.675 55.000 0.00 0.00 0.00 3.36
2613 4914 0.038890 GCCTTCTTTCCTCCTTGCCT 59.961 55.000 0.00 0.00 0.00 4.75
2615 4916 1.352352 CCTTCTTTCCTCCTTGCCTCA 59.648 52.381 0.00 0.00 0.00 3.86
2616 4917 2.025510 CCTTCTTTCCTCCTTGCCTCAT 60.026 50.000 0.00 0.00 0.00 2.90
2618 4919 4.450053 CTTCTTTCCTCCTTGCCTCATAG 58.550 47.826 0.00 0.00 0.00 2.23
2619 4920 3.454858 TCTTTCCTCCTTGCCTCATAGT 58.545 45.455 0.00 0.00 0.00 2.12
2620 4921 3.846588 TCTTTCCTCCTTGCCTCATAGTT 59.153 43.478 0.00 0.00 0.00 2.24
2621 4922 3.914426 TTCCTCCTTGCCTCATAGTTC 57.086 47.619 0.00 0.00 0.00 3.01
2623 4924 2.501723 TCCTCCTTGCCTCATAGTTCAC 59.498 50.000 0.00 0.00 0.00 3.18
2624 4925 2.503356 CCTCCTTGCCTCATAGTTCACT 59.497 50.000 0.00 0.00 0.00 3.41
2626 4927 3.937706 CTCCTTGCCTCATAGTTCACTTG 59.062 47.826 0.00 0.00 0.00 3.16
2627 4928 3.582647 TCCTTGCCTCATAGTTCACTTGA 59.417 43.478 0.00 0.00 0.00 3.02
2630 4931 4.193826 TGCCTCATAGTTCACTTGACTC 57.806 45.455 0.00 0.00 0.00 3.36
2631 4932 3.834813 TGCCTCATAGTTCACTTGACTCT 59.165 43.478 0.00 0.00 0.00 3.24
2633 4934 5.105716 TGCCTCATAGTTCACTTGACTCTAC 60.106 44.000 0.00 0.00 0.00 2.59
2634 4935 5.680151 GCCTCATAGTTCACTTGACTCTACC 60.680 48.000 0.00 0.00 0.00 3.18
2636 4937 6.268825 TCATAGTTCACTTGACTCTACCAC 57.731 41.667 0.00 0.00 0.00 4.16
2637 4938 3.644884 AGTTCACTTGACTCTACCACG 57.355 47.619 0.00 0.00 0.00 4.94
2638 4939 2.957006 AGTTCACTTGACTCTACCACGT 59.043 45.455 0.00 0.00 0.00 4.49
2639 4940 3.004524 AGTTCACTTGACTCTACCACGTC 59.995 47.826 0.00 0.00 0.00 4.34
2640 4941 1.884579 TCACTTGACTCTACCACGTCC 59.115 52.381 0.00 0.00 0.00 4.79
2644 4945 3.323979 ACTTGACTCTACCACGTCCAAAT 59.676 43.478 0.00 0.00 0.00 2.32
2645 4946 3.587797 TGACTCTACCACGTCCAAATC 57.412 47.619 0.00 0.00 0.00 2.17
2646 4947 2.232941 TGACTCTACCACGTCCAAATCC 59.767 50.000 0.00 0.00 0.00 3.01
2647 4948 1.553704 ACTCTACCACGTCCAAATCCC 59.446 52.381 0.00 0.00 0.00 3.85
2649 4950 0.616371 CTACCACGTCCAAATCCCCA 59.384 55.000 0.00 0.00 0.00 4.96
2651 4952 1.131303 ACCACGTCCAAATCCCCAGA 61.131 55.000 0.00 0.00 0.00 3.86
2654 4955 1.131303 ACGTCCAAATCCCCAGACCA 61.131 55.000 0.00 0.00 0.00 4.02
2655 4956 0.392998 CGTCCAAATCCCCAGACCAG 60.393 60.000 0.00 0.00 0.00 4.00
2656 4957 0.698818 GTCCAAATCCCCAGACCAGT 59.301 55.000 0.00 0.00 0.00 4.00
2657 4958 0.991920 TCCAAATCCCCAGACCAGTC 59.008 55.000 0.00 0.00 0.00 3.51
2658 4959 0.698238 CCAAATCCCCAGACCAGTCA 59.302 55.000 0.00 0.00 0.00 3.41
2659 4960 1.075374 CCAAATCCCCAGACCAGTCAA 59.925 52.381 0.00 0.00 0.00 3.18
2660 4961 2.291800 CCAAATCCCCAGACCAGTCAAT 60.292 50.000 0.00 0.00 0.00 2.57
2661 4962 2.756760 CAAATCCCCAGACCAGTCAATG 59.243 50.000 0.00 0.00 0.00 2.82
2665 5193 3.189606 TCCCCAGACCAGTCAATGTATT 58.810 45.455 0.00 0.00 0.00 1.89
2675 5203 5.125356 CCAGTCAATGTATTACCTCATGCA 58.875 41.667 0.00 0.00 0.00 3.96
2676 5204 5.237996 CCAGTCAATGTATTACCTCATGCAG 59.762 44.000 0.00 0.00 0.00 4.41
2678 5206 6.018425 CAGTCAATGTATTACCTCATGCAGTC 60.018 42.308 0.00 0.00 0.00 3.51
2682 5210 6.932356 ATGTATTACCTCATGCAGTCTTTG 57.068 37.500 0.00 0.00 0.00 2.77
2683 5211 5.185454 TGTATTACCTCATGCAGTCTTTGG 58.815 41.667 0.00 0.00 0.00 3.28
2686 5214 1.202976 ACCTCATGCAGTCTTTGGCTT 60.203 47.619 0.00 0.00 0.00 4.35
2687 5215 1.471684 CCTCATGCAGTCTTTGGCTTC 59.528 52.381 0.00 0.00 0.00 3.86
2688 5216 1.129998 CTCATGCAGTCTTTGGCTTCG 59.870 52.381 0.00 0.00 0.00 3.79
2690 5218 1.589716 ATGCAGTCTTTGGCTTCGGC 61.590 55.000 0.00 0.00 40.88 5.54
2691 5219 1.968540 GCAGTCTTTGGCTTCGGCT 60.969 57.895 0.00 0.00 41.44 5.52
2692 5220 1.916697 GCAGTCTTTGGCTTCGGCTC 61.917 60.000 0.00 0.00 41.44 4.70
2693 5221 1.003233 AGTCTTTGGCTTCGGCTCC 60.003 57.895 0.00 0.00 41.44 4.70
2694 5222 1.003233 GTCTTTGGCTTCGGCTCCT 60.003 57.895 0.00 0.00 41.44 3.69
2695 5223 1.021920 GTCTTTGGCTTCGGCTCCTC 61.022 60.000 0.00 0.00 41.44 3.71
2706 5312 3.491652 GCTCCTCCGCTTCAACGC 61.492 66.667 0.00 0.00 0.00 4.84
2708 5314 3.302347 CTCCTCCGCTTCAACGCCT 62.302 63.158 0.00 0.00 0.00 5.52
2709 5315 2.815647 CCTCCGCTTCAACGCCTC 60.816 66.667 0.00 0.00 0.00 4.70
2711 5317 4.388499 TCCGCTTCAACGCCTCCC 62.388 66.667 0.00 0.00 0.00 4.30
2715 5321 1.898154 GCTTCAACGCCTCCCTCTA 59.102 57.895 0.00 0.00 0.00 2.43
2716 5322 0.466124 GCTTCAACGCCTCCCTCTAT 59.534 55.000 0.00 0.00 0.00 1.98
2718 5324 2.035632 CTTCAACGCCTCCCTCTATCT 58.964 52.381 0.00 0.00 0.00 1.98
2719 5325 1.693627 TCAACGCCTCCCTCTATCTC 58.306 55.000 0.00 0.00 0.00 2.75
2720 5326 1.215673 TCAACGCCTCCCTCTATCTCT 59.784 52.381 0.00 0.00 0.00 3.10
2726 5332 2.375174 GCCTCCCTCTATCTCTCTCTCA 59.625 54.545 0.00 0.00 0.00 3.27
2728 5334 4.592942 CCTCCCTCTATCTCTCTCTCATG 58.407 52.174 0.00 0.00 0.00 3.07
2734 5340 5.491070 CTCTATCTCTCTCTCATGGACGAT 58.509 45.833 0.00 0.00 0.00 3.73
2735 5341 5.487433 TCTATCTCTCTCTCATGGACGATC 58.513 45.833 0.00 0.00 0.00 3.69
2740 5346 0.678395 CTCTCATGGACGATCTGGGG 59.322 60.000 0.00 0.00 0.00 4.96
2741 5347 1.070445 CTCATGGACGATCTGGGGC 59.930 63.158 0.00 0.00 0.00 5.80
2743 5349 3.550431 ATGGACGATCTGGGGCGG 61.550 66.667 0.00 0.00 0.00 6.13
2744 5350 4.770362 TGGACGATCTGGGGCGGA 62.770 66.667 0.00 0.00 0.00 5.54
2745 5351 4.222847 GGACGATCTGGGGCGGAC 62.223 72.222 0.00 0.00 0.00 4.79
2746 5352 4.222847 GACGATCTGGGGCGGACC 62.223 72.222 0.00 0.00 39.11 4.46
2760 5366 3.443045 GACCGGTGGCATGGCAAG 61.443 66.667 25.11 19.78 0.00 4.01
2764 5370 2.044053 GGTGGCATGGCAAGGCTA 60.044 61.111 25.11 7.14 32.40 3.93
2765 5371 2.123428 GGTGGCATGGCAAGGCTAG 61.123 63.158 25.11 0.00 32.40 3.42
2766 5372 2.123428 GTGGCATGGCAAGGCTAGG 61.123 63.158 25.11 0.00 32.40 3.02
2767 5373 2.520260 GGCATGGCAAGGCTAGGG 60.520 66.667 15.47 0.00 32.40 3.53
2768 5374 2.597340 GCATGGCAAGGCTAGGGA 59.403 61.111 7.20 0.00 0.00 4.20
2769 5375 1.527844 GCATGGCAAGGCTAGGGAG 60.528 63.158 7.20 0.00 0.00 4.30
2770 5376 1.987807 GCATGGCAAGGCTAGGGAGA 61.988 60.000 7.20 0.00 0.00 3.71
2771 5377 0.179034 CATGGCAAGGCTAGGGAGAC 60.179 60.000 0.00 0.00 0.00 3.36
2772 5378 1.690219 ATGGCAAGGCTAGGGAGACG 61.690 60.000 0.00 0.00 34.92 4.18
2773 5379 2.501610 GCAAGGCTAGGGAGACGG 59.498 66.667 0.00 0.00 34.92 4.79
2775 5381 1.517832 CAAGGCTAGGGAGACGGTG 59.482 63.158 0.00 0.00 34.92 4.94
2777 5383 3.155167 GGCTAGGGAGACGGTGGG 61.155 72.222 0.00 0.00 0.00 4.61
2778 5384 2.363925 GCTAGGGAGACGGTGGGT 60.364 66.667 0.00 0.00 0.00 4.51
2779 5385 2.722201 GCTAGGGAGACGGTGGGTG 61.722 68.421 0.00 0.00 0.00 4.61
2780 5386 2.682494 TAGGGAGACGGTGGGTGC 60.682 66.667 0.00 0.00 0.00 5.01
2784 5390 4.436998 GAGACGGTGGGTGCGAGG 62.437 72.222 0.00 0.00 0.00 4.63
2808 5414 1.258445 CCCTAAGCAGTCGTGGAGGT 61.258 60.000 0.00 0.00 0.00 3.85
2809 5415 0.608640 CCTAAGCAGTCGTGGAGGTT 59.391 55.000 0.00 0.00 0.00 3.50
2810 5416 1.002087 CCTAAGCAGTCGTGGAGGTTT 59.998 52.381 0.00 0.00 0.00 3.27
2811 5417 2.232941 CCTAAGCAGTCGTGGAGGTTTA 59.767 50.000 0.00 0.00 0.00 2.01
2812 5418 2.165319 AAGCAGTCGTGGAGGTTTAC 57.835 50.000 0.00 0.00 0.00 2.01
2813 5419 0.320697 AGCAGTCGTGGAGGTTTACC 59.679 55.000 0.00 0.00 0.00 2.85
2814 5420 0.672711 GCAGTCGTGGAGGTTTACCC 60.673 60.000 0.00 0.00 36.42 3.69
2815 5421 0.682852 CAGTCGTGGAGGTTTACCCA 59.317 55.000 0.00 0.00 36.42 4.51
2816 5422 1.071071 CAGTCGTGGAGGTTTACCCAA 59.929 52.381 0.00 0.00 36.42 4.12
2817 5423 1.982958 AGTCGTGGAGGTTTACCCAAT 59.017 47.619 0.00 0.00 36.42 3.16
2818 5424 2.081462 GTCGTGGAGGTTTACCCAATG 58.919 52.381 0.00 0.00 36.42 2.82
2819 5425 1.700739 TCGTGGAGGTTTACCCAATGT 59.299 47.619 0.00 0.00 36.42 2.71
2820 5426 2.106857 TCGTGGAGGTTTACCCAATGTT 59.893 45.455 0.00 0.00 36.42 2.71
2821 5427 2.888414 CGTGGAGGTTTACCCAATGTTT 59.112 45.455 0.00 0.00 36.42 2.83
2822 5428 4.073549 CGTGGAGGTTTACCCAATGTTTA 58.926 43.478 0.00 0.00 36.42 2.01
2823 5429 4.083164 CGTGGAGGTTTACCCAATGTTTAC 60.083 45.833 0.00 0.00 36.42 2.01
2824 5430 4.219070 GTGGAGGTTTACCCAATGTTTACC 59.781 45.833 0.00 0.00 36.42 2.85
2825 5431 4.106663 TGGAGGTTTACCCAATGTTTACCT 59.893 41.667 0.00 0.00 40.34 3.08
2826 5432 4.461431 GGAGGTTTACCCAATGTTTACCTG 59.539 45.833 0.00 0.00 38.76 4.00
2827 5433 5.318630 GAGGTTTACCCAATGTTTACCTGA 58.681 41.667 0.00 0.00 38.76 3.86
2828 5434 5.899278 AGGTTTACCCAATGTTTACCTGAT 58.101 37.500 0.00 0.00 37.84 2.90
2829 5435 5.949952 AGGTTTACCCAATGTTTACCTGATC 59.050 40.000 0.00 0.00 37.84 2.92
2830 5436 5.712917 GGTTTACCCAATGTTTACCTGATCA 59.287 40.000 0.00 0.00 0.00 2.92
2831 5437 6.209788 GGTTTACCCAATGTTTACCTGATCAA 59.790 38.462 0.00 0.00 0.00 2.57
2832 5438 7.093509 GGTTTACCCAATGTTTACCTGATCAAT 60.094 37.037 0.00 0.00 0.00 2.57
2833 5439 8.962679 GTTTACCCAATGTTTACCTGATCAATA 58.037 33.333 0.00 0.00 0.00 1.90
2834 5440 8.746052 TTACCCAATGTTTACCTGATCAATAG 57.254 34.615 0.00 0.00 0.00 1.73
2835 5441 6.731467 ACCCAATGTTTACCTGATCAATAGT 58.269 36.000 0.00 0.00 0.00 2.12
2836 5442 6.603201 ACCCAATGTTTACCTGATCAATAGTG 59.397 38.462 0.00 0.00 0.00 2.74
2837 5443 6.603201 CCCAATGTTTACCTGATCAATAGTGT 59.397 38.462 0.00 0.00 0.00 3.55
2838 5444 7.122650 CCCAATGTTTACCTGATCAATAGTGTT 59.877 37.037 0.00 0.00 0.00 3.32
2839 5445 7.970061 CCAATGTTTACCTGATCAATAGTGTTG 59.030 37.037 0.00 0.00 0.00 3.33
2840 5446 7.630242 ATGTTTACCTGATCAATAGTGTTGG 57.370 36.000 0.00 0.00 0.00 3.77
2841 5447 5.943416 TGTTTACCTGATCAATAGTGTTGGG 59.057 40.000 0.00 0.00 0.00 4.12
2842 5448 3.652057 ACCTGATCAATAGTGTTGGGG 57.348 47.619 0.00 0.00 0.00 4.96
2843 5449 2.919602 ACCTGATCAATAGTGTTGGGGT 59.080 45.455 0.00 0.00 0.00 4.95
2844 5450 4.108570 ACCTGATCAATAGTGTTGGGGTA 58.891 43.478 0.00 0.00 0.00 3.69
2845 5451 4.080526 ACCTGATCAATAGTGTTGGGGTAC 60.081 45.833 0.00 0.00 0.00 3.34
2846 5452 4.164221 CCTGATCAATAGTGTTGGGGTACT 59.836 45.833 0.00 0.00 0.00 2.73
2847 5453 5.353394 TGATCAATAGTGTTGGGGTACTC 57.647 43.478 0.00 0.00 0.00 2.59
2848 5454 4.163458 TGATCAATAGTGTTGGGGTACTCC 59.837 45.833 4.21 4.21 0.00 3.85
2849 5455 3.522759 TCAATAGTGTTGGGGTACTCCA 58.477 45.455 11.53 11.53 37.22 3.86
2850 5456 3.517901 TCAATAGTGTTGGGGTACTCCAG 59.482 47.826 15.65 0.34 38.17 3.86
2851 5457 1.946984 TAGTGTTGGGGTACTCCAGG 58.053 55.000 15.65 0.00 38.17 4.45
2852 5458 0.104620 AGTGTTGGGGTACTCCAGGT 60.105 55.000 15.65 0.00 38.17 4.00
2853 5459 0.036306 GTGTTGGGGTACTCCAGGTG 59.964 60.000 15.65 0.00 38.17 4.00
2854 5460 1.131303 TGTTGGGGTACTCCAGGTGG 61.131 60.000 15.65 0.00 38.17 4.61
2855 5461 2.228480 TTGGGGTACTCCAGGTGGC 61.228 63.158 15.65 0.00 38.17 5.01
2856 5462 3.408853 GGGGTACTCCAGGTGGCC 61.409 72.222 6.99 0.00 37.22 5.36
2857 5463 3.408853 GGGTACTCCAGGTGGCCC 61.409 72.222 0.00 7.43 37.32 5.80
2858 5464 3.782443 GGTACTCCAGGTGGCCCG 61.782 72.222 0.00 0.00 35.12 6.13
2859 5465 2.682494 GTACTCCAGGTGGCCCGA 60.682 66.667 0.00 0.00 35.12 5.14
2860 5466 2.363795 TACTCCAGGTGGCCCGAG 60.364 66.667 0.00 0.00 35.12 4.63
2861 5467 3.976490 TACTCCAGGTGGCCCGAGG 62.976 68.421 0.00 0.00 35.12 4.63
2863 5469 4.649705 TCCAGGTGGCCCGAGGAA 62.650 66.667 0.00 0.00 37.02 3.36
2864 5470 4.101448 CCAGGTGGCCCGAGGAAG 62.101 72.222 0.00 0.00 33.93 3.46
2865 5471 4.101448 CAGGTGGCCCGAGGAAGG 62.101 72.222 0.00 0.00 35.12 3.46
2866 5472 4.332543 AGGTGGCCCGAGGAAGGA 62.333 66.667 0.00 0.00 35.12 3.36
2867 5473 3.327404 GGTGGCCCGAGGAAGGAA 61.327 66.667 0.00 0.00 0.00 3.36
2868 5474 2.680370 GGTGGCCCGAGGAAGGAAT 61.680 63.158 0.00 0.00 0.00 3.01
2869 5475 1.153147 GTGGCCCGAGGAAGGAATC 60.153 63.158 0.00 0.00 0.00 2.52
2870 5476 2.109181 GGCCCGAGGAAGGAATCG 59.891 66.667 0.00 0.00 38.65 3.34
2871 5477 2.432300 GGCCCGAGGAAGGAATCGA 61.432 63.158 0.00 0.00 41.40 3.59
2872 5478 1.520666 GCCCGAGGAAGGAATCGAA 59.479 57.895 0.00 0.00 41.40 3.71
2873 5479 0.107848 GCCCGAGGAAGGAATCGAAA 60.108 55.000 0.00 0.00 41.40 3.46
2874 5480 1.653151 CCCGAGGAAGGAATCGAAAC 58.347 55.000 0.00 0.00 41.40 2.78
2875 5481 1.653151 CCGAGGAAGGAATCGAAACC 58.347 55.000 0.00 0.00 41.40 3.27
2876 5482 1.653151 CGAGGAAGGAATCGAAACCC 58.347 55.000 7.48 0.95 41.40 4.11
2877 5483 1.207329 CGAGGAAGGAATCGAAACCCT 59.793 52.381 7.48 3.17 41.40 4.34
2878 5484 2.429610 CGAGGAAGGAATCGAAACCCTA 59.570 50.000 7.48 0.00 41.40 3.53
2879 5485 3.491104 CGAGGAAGGAATCGAAACCCTAG 60.491 52.174 7.48 0.00 41.40 3.02
2880 5486 3.705072 GAGGAAGGAATCGAAACCCTAGA 59.295 47.826 7.48 0.00 0.00 2.43
2881 5487 4.299485 AGGAAGGAATCGAAACCCTAGAT 58.701 43.478 7.48 0.00 0.00 1.98
2882 5488 4.345547 AGGAAGGAATCGAAACCCTAGATC 59.654 45.833 7.48 0.00 0.00 2.75
2883 5489 4.101119 GGAAGGAATCGAAACCCTAGATCA 59.899 45.833 7.48 0.00 0.00 2.92
2884 5490 4.674281 AGGAATCGAAACCCTAGATCAC 57.326 45.455 7.48 0.00 0.00 3.06
2885 5491 4.290942 AGGAATCGAAACCCTAGATCACT 58.709 43.478 7.48 0.00 0.00 3.41
2886 5492 4.100189 AGGAATCGAAACCCTAGATCACTG 59.900 45.833 7.48 0.00 0.00 3.66
2887 5493 4.141914 GGAATCGAAACCCTAGATCACTGT 60.142 45.833 0.00 0.00 0.00 3.55
2890 5496 3.380637 TCGAAACCCTAGATCACTGTAGC 59.619 47.826 0.00 0.00 0.00 3.58
2895 5501 3.116939 ACCCTAGATCACTGTAGCCAGAT 60.117 47.826 0.00 0.00 41.50 2.90
2901 5507 1.007118 TCACTGTAGCCAGATCCAGGA 59.993 52.381 6.00 0.00 41.50 3.86
2902 5508 1.833630 CACTGTAGCCAGATCCAGGAA 59.166 52.381 6.00 0.00 41.50 3.36
2903 5509 1.834263 ACTGTAGCCAGATCCAGGAAC 59.166 52.381 6.00 0.00 41.50 3.62
2904 5510 1.833630 CTGTAGCCAGATCCAGGAACA 59.166 52.381 6.00 7.77 41.50 3.18
2909 5515 1.541588 GCCAGATCCAGGAACAACAAC 59.458 52.381 6.00 0.00 0.00 3.32
2910 5516 2.862541 CCAGATCCAGGAACAACAACA 58.137 47.619 0.00 0.00 0.00 3.33
2911 5517 3.221771 CCAGATCCAGGAACAACAACAA 58.778 45.455 0.00 0.00 0.00 2.83
2912 5518 3.004734 CCAGATCCAGGAACAACAACAAC 59.995 47.826 0.00 0.00 0.00 3.32
2914 5520 2.818751 TCCAGGAACAACAACAACCT 57.181 45.000 0.00 0.00 0.00 3.50
2915 5521 2.650322 TCCAGGAACAACAACAACCTC 58.350 47.619 0.00 0.00 0.00 3.85
2916 5522 2.025793 TCCAGGAACAACAACAACCTCA 60.026 45.455 0.00 0.00 0.00 3.86
2918 5524 2.752354 CAGGAACAACAACAACCTCACA 59.248 45.455 0.00 0.00 0.00 3.58
2921 5527 3.057174 GGAACAACAACAACCTCACACAA 60.057 43.478 0.00 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.755804 TCAACATTATTTTTGAACTATGCAACA 57.244 25.926 0.00 0.00 0.00 3.33
29 30 8.910666 CGTCAACATTATTTTTGAACTATGCAA 58.089 29.630 0.00 0.00 33.58 4.08
30 31 7.540400 CCGTCAACATTATTTTTGAACTATGCA 59.460 33.333 0.00 0.00 33.58 3.96
31 32 7.462724 GCCGTCAACATTATTTTTGAACTATGC 60.463 37.037 0.00 0.00 33.58 3.14
32 33 7.540400 TGCCGTCAACATTATTTTTGAACTATG 59.460 33.333 0.00 0.00 33.58 2.23
33 34 7.598278 TGCCGTCAACATTATTTTTGAACTAT 58.402 30.769 0.00 0.00 33.58 2.12
34 35 6.971602 TGCCGTCAACATTATTTTTGAACTA 58.028 32.000 0.00 0.00 33.58 2.24
35 36 5.837437 TGCCGTCAACATTATTTTTGAACT 58.163 33.333 0.00 0.00 33.58 3.01
36 37 6.704512 ATGCCGTCAACATTATTTTTGAAC 57.295 33.333 0.00 0.00 33.58 3.18
165 166 9.665719 TTCTGCTTTTCCTTTCAGTTTTAATTT 57.334 25.926 0.00 0.00 0.00 1.82
166 167 9.665719 TTTCTGCTTTTCCTTTCAGTTTTAATT 57.334 25.926 0.00 0.00 0.00 1.40
167 168 9.665719 TTTTCTGCTTTTCCTTTCAGTTTTAAT 57.334 25.926 0.00 0.00 0.00 1.40
168 169 9.495572 TTTTTCTGCTTTTCCTTTCAGTTTTAA 57.504 25.926 0.00 0.00 0.00 1.52
170 171 7.977789 TTTTTCTGCTTTTCCTTTCAGTTTT 57.022 28.000 0.00 0.00 0.00 2.43
191 192 9.987272 CTTCCATCCAGTTTATCTTTTCTTTTT 57.013 29.630 0.00 0.00 0.00 1.94
192 193 9.367160 TCTTCCATCCAGTTTATCTTTTCTTTT 57.633 29.630 0.00 0.00 0.00 2.27
193 194 8.940397 TCTTCCATCCAGTTTATCTTTTCTTT 57.060 30.769 0.00 0.00 0.00 2.52
194 195 8.166726 ACTCTTCCATCCAGTTTATCTTTTCTT 58.833 33.333 0.00 0.00 0.00 2.52
195 196 7.694093 ACTCTTCCATCCAGTTTATCTTTTCT 58.306 34.615 0.00 0.00 0.00 2.52
196 197 7.066404 GGACTCTTCCATCCAGTTTATCTTTTC 59.934 40.741 0.00 0.00 42.30 2.29
197 198 6.887002 GGACTCTTCCATCCAGTTTATCTTTT 59.113 38.462 0.00 0.00 42.30 2.27
198 199 6.216456 AGGACTCTTCCATCCAGTTTATCTTT 59.784 38.462 0.00 0.00 45.72 2.52
199 200 5.728741 AGGACTCTTCCATCCAGTTTATCTT 59.271 40.000 0.00 0.00 45.72 2.40
200 201 5.130145 CAGGACTCTTCCATCCAGTTTATCT 59.870 44.000 0.00 0.00 45.72 1.98
201 202 5.129485 TCAGGACTCTTCCATCCAGTTTATC 59.871 44.000 0.00 0.00 45.72 1.75
202 203 5.032846 TCAGGACTCTTCCATCCAGTTTAT 58.967 41.667 0.00 0.00 45.72 1.40
203 204 4.425772 TCAGGACTCTTCCATCCAGTTTA 58.574 43.478 0.00 0.00 45.72 2.01
204 205 3.251484 TCAGGACTCTTCCATCCAGTTT 58.749 45.455 0.00 0.00 45.72 2.66
205 206 2.907892 TCAGGACTCTTCCATCCAGTT 58.092 47.619 0.00 0.00 45.72 3.16
206 207 2.630889 TCAGGACTCTTCCATCCAGT 57.369 50.000 0.00 0.00 45.72 4.00
207 208 3.604582 GTTTCAGGACTCTTCCATCCAG 58.395 50.000 0.00 0.00 45.72 3.86
208 209 2.305927 GGTTTCAGGACTCTTCCATCCA 59.694 50.000 0.00 0.00 45.72 3.41
209 210 2.678190 CGGTTTCAGGACTCTTCCATCC 60.678 54.545 0.00 0.00 45.72 3.51
210 211 2.622436 CGGTTTCAGGACTCTTCCATC 58.378 52.381 0.00 0.00 45.72 3.51
211 212 1.339151 GCGGTTTCAGGACTCTTCCAT 60.339 52.381 0.00 0.00 45.72 3.41
212 213 0.034896 GCGGTTTCAGGACTCTTCCA 59.965 55.000 0.00 0.00 45.72 3.53
213 214 0.321996 AGCGGTTTCAGGACTCTTCC 59.678 55.000 0.00 0.00 43.22 3.46
214 215 1.433534 CAGCGGTTTCAGGACTCTTC 58.566 55.000 0.00 0.00 0.00 2.87
215 216 0.603975 GCAGCGGTTTCAGGACTCTT 60.604 55.000 0.00 0.00 0.00 2.85
216 217 1.004440 GCAGCGGTTTCAGGACTCT 60.004 57.895 0.00 0.00 0.00 3.24
217 218 1.294659 CTGCAGCGGTTTCAGGACTC 61.295 60.000 0.00 0.00 0.00 3.36
218 219 1.302033 CTGCAGCGGTTTCAGGACT 60.302 57.895 0.00 0.00 0.00 3.85
219 220 0.884704 TTCTGCAGCGGTTTCAGGAC 60.885 55.000 9.47 0.00 0.00 3.85
220 221 0.179032 TTTCTGCAGCGGTTTCAGGA 60.179 50.000 9.47 2.80 0.00 3.86
221 222 0.239347 CTTTCTGCAGCGGTTTCAGG 59.761 55.000 9.47 0.00 0.00 3.86
222 223 0.239347 CCTTTCTGCAGCGGTTTCAG 59.761 55.000 9.47 7.18 0.00 3.02
223 224 0.465460 ACCTTTCTGCAGCGGTTTCA 60.465 50.000 9.47 0.00 0.00 2.69
224 225 0.668535 AACCTTTCTGCAGCGGTTTC 59.331 50.000 21.65 0.00 36.39 2.78
225 226 1.111277 AAACCTTTCTGCAGCGGTTT 58.889 45.000 27.47 27.47 43.00 3.27
226 227 0.668535 GAAACCTTTCTGCAGCGGTT 59.331 50.000 21.65 21.65 41.25 4.44
227 228 1.172812 GGAAACCTTTCTGCAGCGGT 61.173 55.000 9.47 12.36 37.35 5.68
228 229 1.172180 TGGAAACCTTTCTGCAGCGG 61.172 55.000 9.47 11.69 37.35 5.52
229 230 0.667993 TTGGAAACCTTTCTGCAGCG 59.332 50.000 9.47 0.00 37.35 5.18
230 231 2.473816 GTTTGGAAACCTTTCTGCAGC 58.526 47.619 9.47 0.00 37.35 5.25
241 242 6.036300 CGGTTTTTAGGAAAAGGTTTGGAAAC 59.964 38.462 0.00 0.00 35.53 2.78
242 243 6.107343 CGGTTTTTAGGAAAAGGTTTGGAAA 58.893 36.000 0.00 0.00 35.53 3.13
243 244 5.187381 ACGGTTTTTAGGAAAAGGTTTGGAA 59.813 36.000 0.00 0.00 35.53 3.53
244 245 4.710865 ACGGTTTTTAGGAAAAGGTTTGGA 59.289 37.500 0.00 0.00 35.53 3.53
245 246 4.806775 CACGGTTTTTAGGAAAAGGTTTGG 59.193 41.667 0.00 0.00 35.53 3.28
246 247 4.806775 CCACGGTTTTTAGGAAAAGGTTTG 59.193 41.667 0.00 0.00 35.53 2.93
247 248 4.710865 TCCACGGTTTTTAGGAAAAGGTTT 59.289 37.500 0.00 0.00 35.53 3.27
248 249 4.279982 TCCACGGTTTTTAGGAAAAGGTT 58.720 39.130 0.00 0.00 35.53 3.50
249 250 3.900971 TCCACGGTTTTTAGGAAAAGGT 58.099 40.909 0.00 0.00 35.53 3.50
250 251 4.922471 TTCCACGGTTTTTAGGAAAAGG 57.078 40.909 0.00 0.00 37.22 3.11
253 254 7.104290 ACAAATTTTCCACGGTTTTTAGGAAA 58.896 30.769 5.73 5.73 45.54 3.13
254 255 6.641474 ACAAATTTTCCACGGTTTTTAGGAA 58.359 32.000 0.00 0.00 38.31 3.36
255 256 6.223351 ACAAATTTTCCACGGTTTTTAGGA 57.777 33.333 0.00 0.00 0.00 2.94
256 257 6.238239 CCAACAAATTTTCCACGGTTTTTAGG 60.238 38.462 0.00 0.00 0.00 2.69
257 258 6.238239 CCCAACAAATTTTCCACGGTTTTTAG 60.238 38.462 0.00 0.00 0.00 1.85
258 259 5.585047 CCCAACAAATTTTCCACGGTTTTTA 59.415 36.000 0.00 0.00 0.00 1.52
259 260 4.396478 CCCAACAAATTTTCCACGGTTTTT 59.604 37.500 0.00 0.00 0.00 1.94
260 261 3.942115 CCCAACAAATTTTCCACGGTTTT 59.058 39.130 0.00 0.00 0.00 2.43
261 262 3.536570 CCCAACAAATTTTCCACGGTTT 58.463 40.909 0.00 0.00 0.00 3.27
262 263 2.743510 GCCCAACAAATTTTCCACGGTT 60.744 45.455 0.00 0.00 0.00 4.44
263 264 1.202592 GCCCAACAAATTTTCCACGGT 60.203 47.619 0.00 0.00 0.00 4.83
264 265 1.507562 GCCCAACAAATTTTCCACGG 58.492 50.000 0.00 0.00 0.00 4.94
265 266 1.507562 GGCCCAACAAATTTTCCACG 58.492 50.000 0.00 0.00 0.00 4.94
266 267 1.507562 CGGCCCAACAAATTTTCCAC 58.492 50.000 0.00 0.00 0.00 4.02
267 268 0.394565 CCGGCCCAACAAATTTTCCA 59.605 50.000 0.00 0.00 0.00 3.53
268 269 0.953471 GCCGGCCCAACAAATTTTCC 60.953 55.000 18.11 0.00 0.00 3.13
269 270 0.034756 AGCCGGCCCAACAAATTTTC 59.965 50.000 26.15 0.00 0.00 2.29
270 271 0.034756 GAGCCGGCCCAACAAATTTT 59.965 50.000 26.15 0.00 0.00 1.82
271 272 1.671166 GAGCCGGCCCAACAAATTT 59.329 52.632 26.15 0.00 0.00 1.82
272 273 2.635443 CGAGCCGGCCCAACAAATT 61.635 57.895 26.15 0.00 0.00 1.82
273 274 3.061848 CGAGCCGGCCCAACAAAT 61.062 61.111 26.15 0.00 0.00 2.32
274 275 4.572571 ACGAGCCGGCCCAACAAA 62.573 61.111 26.15 0.00 0.00 2.83
275 276 4.572571 AACGAGCCGGCCCAACAA 62.573 61.111 26.15 0.00 0.00 2.83
276 277 4.572571 AAACGAGCCGGCCCAACA 62.573 61.111 26.15 0.00 0.00 3.33
277 278 3.733960 GAAACGAGCCGGCCCAAC 61.734 66.667 26.15 11.66 0.00 3.77
278 279 4.257654 TGAAACGAGCCGGCCCAA 62.258 61.111 26.15 0.00 0.00 4.12
281 282 3.423154 CTGTGAAACGAGCCGGCC 61.423 66.667 26.15 14.23 42.39 6.13
282 283 2.357034 TCTGTGAAACGAGCCGGC 60.357 61.111 21.89 21.89 42.39 6.13
283 284 0.670546 ATGTCTGTGAAACGAGCCGG 60.671 55.000 0.00 0.00 42.39 6.13
284 285 1.654105 GTATGTCTGTGAAACGAGCCG 59.346 52.381 0.00 0.00 42.39 5.52
285 286 2.000447 GGTATGTCTGTGAAACGAGCC 59.000 52.381 0.00 0.00 42.39 4.70
286 287 1.654105 CGGTATGTCTGTGAAACGAGC 59.346 52.381 0.00 0.00 42.39 5.03
287 288 1.654105 GCGGTATGTCTGTGAAACGAG 59.346 52.381 0.00 0.00 42.39 4.18
288 289 1.271379 AGCGGTATGTCTGTGAAACGA 59.729 47.619 0.00 0.00 42.39 3.85
289 290 1.710013 AGCGGTATGTCTGTGAAACG 58.290 50.000 0.00 0.00 42.39 3.60
290 291 4.219033 CAAAAGCGGTATGTCTGTGAAAC 58.781 43.478 0.00 0.00 37.35 2.78
291 292 3.304391 GCAAAAGCGGTATGTCTGTGAAA 60.304 43.478 0.00 0.00 0.00 2.69
292 293 2.225491 GCAAAAGCGGTATGTCTGTGAA 59.775 45.455 0.00 0.00 0.00 3.18
293 294 1.804151 GCAAAAGCGGTATGTCTGTGA 59.196 47.619 0.00 0.00 0.00 3.58
294 295 1.464023 CGCAAAAGCGGTATGTCTGTG 60.464 52.381 1.34 0.00 0.00 3.66
295 296 0.796312 CGCAAAAGCGGTATGTCTGT 59.204 50.000 1.34 0.00 0.00 3.41
296 297 0.521242 GCGCAAAAGCGGTATGTCTG 60.521 55.000 12.01 0.00 0.00 3.51
297 298 0.673644 AGCGCAAAAGCGGTATGTCT 60.674 50.000 11.47 0.00 42.16 3.41
298 299 1.003851 TAGCGCAAAAGCGGTATGTC 58.996 50.000 16.39 0.00 43.63 3.06
299 300 0.725117 GTAGCGCAAAAGCGGTATGT 59.275 50.000 21.83 0.00 45.44 2.29
300 301 0.315059 CGTAGCGCAAAAGCGGTATG 60.315 55.000 21.83 21.64 45.44 2.39
301 302 0.458889 TCGTAGCGCAAAAGCGGTAT 60.459 50.000 21.83 0.00 45.44 2.73
302 303 0.666880 TTCGTAGCGCAAAAGCGGTA 60.667 50.000 16.39 16.39 43.63 4.02
303 304 1.957186 TTCGTAGCGCAAAAGCGGT 60.957 52.632 18.43 18.43 45.78 5.68
304 305 1.509162 GTTCGTAGCGCAAAAGCGG 60.509 57.895 11.47 0.00 43.00 5.52
305 306 0.516524 GAGTTCGTAGCGCAAAAGCG 60.517 55.000 11.47 5.38 43.00 4.68
306 307 0.179222 GGAGTTCGTAGCGCAAAAGC 60.179 55.000 11.47 0.00 37.41 3.51
307 308 1.126846 CTGGAGTTCGTAGCGCAAAAG 59.873 52.381 11.47 0.00 0.00 2.27
308 309 1.144969 CTGGAGTTCGTAGCGCAAAA 58.855 50.000 11.47 0.00 0.00 2.44
309 310 0.669318 CCTGGAGTTCGTAGCGCAAA 60.669 55.000 11.47 0.00 0.00 3.68
310 311 1.080093 CCTGGAGTTCGTAGCGCAA 60.080 57.895 11.47 0.00 0.00 4.85
311 312 1.320344 ATCCTGGAGTTCGTAGCGCA 61.320 55.000 11.47 0.00 0.00 6.09
312 313 0.595310 GATCCTGGAGTTCGTAGCGC 60.595 60.000 0.00 0.00 0.00 5.92
313 314 1.025812 AGATCCTGGAGTTCGTAGCG 58.974 55.000 1.52 0.00 0.00 4.26
314 315 3.528597 AAAGATCCTGGAGTTCGTAGC 57.471 47.619 1.52 0.00 0.00 3.58
315 316 6.574350 ACATAAAAGATCCTGGAGTTCGTAG 58.426 40.000 1.52 0.00 0.00 3.51
316 317 6.540438 ACATAAAAGATCCTGGAGTTCGTA 57.460 37.500 1.52 0.00 0.00 3.43
317 318 5.422214 ACATAAAAGATCCTGGAGTTCGT 57.578 39.130 1.52 0.00 0.00 3.85
318 319 6.743575 AAACATAAAAGATCCTGGAGTTCG 57.256 37.500 1.52 0.00 0.00 3.95
797 798 3.119101 ACGGAAAGCTCGACATCACTAAT 60.119 43.478 0.00 0.00 0.00 1.73
798 799 2.230508 ACGGAAAGCTCGACATCACTAA 59.769 45.455 0.00 0.00 0.00 2.24
799 800 1.816835 ACGGAAAGCTCGACATCACTA 59.183 47.619 0.00 0.00 0.00 2.74
808 809 0.108615 ATCAGTCCACGGAAAGCTCG 60.109 55.000 0.00 0.00 0.00 5.03
815 816 2.940994 TGGAAAAATCAGTCCACGGA 57.059 45.000 0.00 0.00 39.04 4.69
863 874 8.306761 GGTCAATTAAGAAAATGGACAAGTCAT 58.693 33.333 7.39 0.00 0.00 3.06
865 876 6.801862 CGGTCAATTAAGAAAATGGACAAGTC 59.198 38.462 7.39 0.00 0.00 3.01
870 884 4.421058 GCCGGTCAATTAAGAAAATGGAC 58.579 43.478 1.90 0.00 0.00 4.02
875 889 2.160813 GCTCGCCGGTCAATTAAGAAAA 59.839 45.455 1.90 0.00 0.00 2.29
892 906 1.915614 GATGGCTGGTTGTGTGCTCG 61.916 60.000 0.00 0.00 0.00 5.03
942 967 1.966451 GCTGCCTAACGCTGTGGTT 60.966 57.895 0.00 0.00 38.61 3.67
943 968 2.358737 GCTGCCTAACGCTGTGGT 60.359 61.111 0.00 0.00 38.61 4.16
944 969 2.046892 AGCTGCCTAACGCTGTGG 60.047 61.111 0.00 0.00 38.61 4.17
945 970 0.742281 ATGAGCTGCCTAACGCTGTG 60.742 55.000 0.00 0.00 38.61 3.66
946 971 0.460987 GATGAGCTGCCTAACGCTGT 60.461 55.000 0.00 0.00 38.61 4.40
947 972 1.156645 GGATGAGCTGCCTAACGCTG 61.157 60.000 0.00 0.00 36.45 5.18
948 973 1.144936 GGATGAGCTGCCTAACGCT 59.855 57.895 0.00 0.00 39.61 5.07
949 974 0.878086 GAGGATGAGCTGCCTAACGC 60.878 60.000 0.00 0.00 33.84 4.84
1056 1110 1.674322 GAGCTTGGGGTTTAGCGCA 60.674 57.895 11.47 0.00 42.18 6.09
1057 1111 0.960861 AAGAGCTTGGGGTTTAGCGC 60.961 55.000 0.00 0.00 42.18 5.92
1127 1181 2.732094 GGACGAACACGACGTGGG 60.732 66.667 29.86 20.44 43.97 4.61
1506 1581 2.034879 CAAACGGCCGCTCATCACT 61.035 57.895 28.58 0.00 0.00 3.41
1528 1609 4.316823 ACCCTGGACGGAGAGCCA 62.317 66.667 0.00 0.00 34.79 4.75
1529 1610 3.462678 GACCCTGGACGGAGAGCC 61.463 72.222 0.00 0.00 33.16 4.70
1807 1888 0.108138 AGAAGAGCATACACGGCCAC 60.108 55.000 2.24 0.00 0.00 5.01
1933 2020 9.843334 CGTATATTCTATTAGACTGGAAGGAAC 57.157 37.037 0.00 0.00 39.30 3.62
1958 2284 3.009723 AGACTGCAAATGTAATCCCACG 58.990 45.455 0.00 0.00 0.00 4.94
1968 2294 3.341823 AGACTTAGCCAGACTGCAAATG 58.658 45.455 0.00 0.00 0.00 2.32
1976 2302 3.526534 GTGGATTGAGACTTAGCCAGAC 58.473 50.000 0.00 0.00 0.00 3.51
1980 2306 1.480954 TCGGTGGATTGAGACTTAGCC 59.519 52.381 0.00 0.00 0.00 3.93
1991 2317 3.833070 ACTTAGTGAAGTCTCGGTGGATT 59.167 43.478 0.00 0.00 42.50 3.01
1992 2318 3.432378 ACTTAGTGAAGTCTCGGTGGAT 58.568 45.455 0.00 0.00 42.50 3.41
2003 2329 7.865385 GGATATAGCAACTGAGACTTAGTGAAG 59.135 40.741 0.00 0.00 38.76 3.02
2005 2331 6.017026 CGGATATAGCAACTGAGACTTAGTGA 60.017 42.308 0.00 0.00 0.00 3.41
2006 2332 6.146216 CGGATATAGCAACTGAGACTTAGTG 58.854 44.000 0.00 0.00 0.00 2.74
2008 2334 6.146216 CACGGATATAGCAACTGAGACTTAG 58.854 44.000 0.00 0.00 0.00 2.18
2009 2335 5.593095 ACACGGATATAGCAACTGAGACTTA 59.407 40.000 0.00 0.00 0.00 2.24
2010 2336 4.402793 ACACGGATATAGCAACTGAGACTT 59.597 41.667 0.00 0.00 0.00 3.01
2011 2337 3.954904 ACACGGATATAGCAACTGAGACT 59.045 43.478 0.00 0.00 0.00 3.24
2012 2338 4.308899 ACACGGATATAGCAACTGAGAC 57.691 45.455 0.00 0.00 0.00 3.36
2013 2339 6.459670 TTTACACGGATATAGCAACTGAGA 57.540 37.500 0.00 0.00 0.00 3.27
2014 2340 7.715265 ATTTTACACGGATATAGCAACTGAG 57.285 36.000 0.00 0.00 0.00 3.35
2015 2341 8.500753 AAATTTTACACGGATATAGCAACTGA 57.499 30.769 0.00 0.00 0.00 3.41
2016 2342 9.221775 GAAAATTTTACACGGATATAGCAACTG 57.778 33.333 2.75 0.00 0.00 3.16
2017 2343 9.174166 AGAAAATTTTACACGGATATAGCAACT 57.826 29.630 2.75 0.00 0.00 3.16
2018 2344 9.783256 AAGAAAATTTTACACGGATATAGCAAC 57.217 29.630 2.75 0.00 0.00 4.17
2110 4223 8.655651 TGTTCCTGATTCCAAAATTTGTTAAC 57.344 30.769 4.92 0.00 0.00 2.01
2112 4225 9.844257 AAATGTTCCTGATTCCAAAATTTGTTA 57.156 25.926 4.92 0.00 0.00 2.41
2269 4566 9.610705 TTGGAATTTCAGAAAATCACATTTTGA 57.389 25.926 12.18 0.00 42.15 2.69
2272 4569 9.393512 TGTTTGGAATTTCAGAAAATCACATTT 57.606 25.926 12.18 0.00 33.93 2.32
2273 4570 8.961294 TGTTTGGAATTTCAGAAAATCACATT 57.039 26.923 12.18 0.00 33.93 2.71
2274 4571 8.961294 TTGTTTGGAATTTCAGAAAATCACAT 57.039 26.923 12.18 0.00 33.93 3.21
2275 4572 8.961294 ATTGTTTGGAATTTCAGAAAATCACA 57.039 26.923 12.18 6.05 33.93 3.58
2302 4599 9.816354 CCCTTAAAAAGAGTTCAGAAATTTCAA 57.184 29.630 19.99 4.01 0.00 2.69
2304 4601 7.872993 CCCCCTTAAAAAGAGTTCAGAAATTTC 59.127 37.037 10.33 10.33 0.00 2.17
2309 4606 5.656549 TCCCCCTTAAAAAGAGTTCAGAA 57.343 39.130 0.00 0.00 0.00 3.02
2340 4637 7.808381 CGGTTTCTTTTTCCTCCTTTCTATTTC 59.192 37.037 0.00 0.00 0.00 2.17
2342 4639 6.208797 CCGGTTTCTTTTTCCTCCTTTCTATT 59.791 38.462 0.00 0.00 0.00 1.73
2344 4641 5.067954 CCGGTTTCTTTTTCCTCCTTTCTA 58.932 41.667 0.00 0.00 0.00 2.10
2346 4643 3.887110 TCCGGTTTCTTTTTCCTCCTTTC 59.113 43.478 0.00 0.00 0.00 2.62
2348 4645 3.588210 TCCGGTTTCTTTTTCCTCCTT 57.412 42.857 0.00 0.00 0.00 3.36
2350 4647 4.659111 TTTTCCGGTTTCTTTTTCCTCC 57.341 40.909 0.00 0.00 0.00 4.30
2369 4666 7.392953 ACAAGTTCATGTCCCATTTTTGTTTTT 59.607 29.630 0.00 0.00 0.00 1.94
2370 4667 6.883756 ACAAGTTCATGTCCCATTTTTGTTTT 59.116 30.769 0.00 0.00 0.00 2.43
2371 4668 6.413892 ACAAGTTCATGTCCCATTTTTGTTT 58.586 32.000 0.00 0.00 0.00 2.83
2372 4669 5.988287 ACAAGTTCATGTCCCATTTTTGTT 58.012 33.333 0.00 0.00 0.00 2.83
2386 4687 5.070685 GGGTAAAGGTCTTGACAAGTTCAT 58.929 41.667 14.75 5.04 32.84 2.57
2421 4722 1.059584 TGTTGGCTCCTGTTCTGGGA 61.060 55.000 0.00 0.00 0.00 4.37
2430 4731 6.573094 GCAAGAAAAATTAGATGTTGGCTCCT 60.573 38.462 0.00 0.00 0.00 3.69
2438 4739 6.372381 GCCCATTTGCAAGAAAAATTAGATGT 59.628 34.615 0.00 0.00 0.00 3.06
2440 4741 6.596497 CAGCCCATTTGCAAGAAAAATTAGAT 59.404 34.615 0.00 0.00 0.00 1.98
2443 4744 5.002516 CCAGCCCATTTGCAAGAAAAATTA 58.997 37.500 0.00 0.00 0.00 1.40
2450 4751 2.285024 GGCCAGCCCATTTGCAAGA 61.285 57.895 0.00 0.00 0.00 3.02
2468 4769 2.046892 CAGGACCAACCGAGCTGG 60.047 66.667 0.00 0.00 44.74 4.85
2472 4773 2.432628 GTCGCAGGACCAACCGAG 60.433 66.667 0.00 0.00 44.74 4.63
2475 4776 2.737376 GTCGTCGCAGGACCAACC 60.737 66.667 0.00 0.00 40.17 3.77
2486 4787 1.203313 GGGAGTTTTTGCGTCGTCG 59.797 57.895 0.00 0.00 40.37 5.12
2487 4788 1.203313 CGGGAGTTTTTGCGTCGTC 59.797 57.895 0.00 0.00 0.00 4.20
2488 4789 1.227321 TCGGGAGTTTTTGCGTCGT 60.227 52.632 0.00 0.00 0.00 4.34
2490 4791 0.234884 CTGTCGGGAGTTTTTGCGTC 59.765 55.000 0.00 0.00 0.00 5.19
2491 4792 0.463116 ACTGTCGGGAGTTTTTGCGT 60.463 50.000 0.00 0.00 0.00 5.24
2493 4794 1.594331 AGACTGTCGGGAGTTTTTGC 58.406 50.000 1.52 0.00 0.00 3.68
2494 4795 2.290641 CCAAGACTGTCGGGAGTTTTTG 59.709 50.000 14.04 5.67 0.00 2.44
2495 4796 2.572290 CCAAGACTGTCGGGAGTTTTT 58.428 47.619 14.04 0.00 0.00 1.94
2497 4798 0.396811 CCCAAGACTGTCGGGAGTTT 59.603 55.000 19.01 0.00 43.21 2.66
2498 4799 2.058675 CCCAAGACTGTCGGGAGTT 58.941 57.895 19.01 0.00 43.21 3.01
2499 4800 2.584391 GCCCAAGACTGTCGGGAGT 61.584 63.158 20.85 0.00 43.21 3.85
2500 4801 2.266055 GCCCAAGACTGTCGGGAG 59.734 66.667 20.85 12.65 43.21 4.30
2502 4803 2.046892 CAGCCCAAGACTGTCGGG 60.047 66.667 14.41 14.41 43.42 5.14
2503 4804 2.046892 CCAGCCCAAGACTGTCGG 60.047 66.667 1.52 0.00 33.09 4.79
2504 4805 2.743928 GCCAGCCCAAGACTGTCG 60.744 66.667 1.52 0.00 33.09 4.35
2505 4806 2.360475 GGCCAGCCCAAGACTGTC 60.360 66.667 0.00 0.00 33.09 3.51
2506 4807 2.417558 GAAGGCCAGCCCAAGACTGT 62.418 60.000 5.01 0.00 36.58 3.55
2507 4808 1.676967 GAAGGCCAGCCCAAGACTG 60.677 63.158 5.01 0.00 36.58 3.51
2508 4809 2.759795 GAAGGCCAGCCCAAGACT 59.240 61.111 5.01 0.00 36.58 3.24
2533 4834 2.970974 GCAAGCCAACAGACGAGCC 61.971 63.158 0.00 0.00 0.00 4.70
2534 4835 2.558313 GCAAGCCAACAGACGAGC 59.442 61.111 0.00 0.00 0.00 5.03
2535 4836 1.597854 TGGCAAGCCAACAGACGAG 60.598 57.895 12.11 0.00 44.12 4.18
2536 4837 2.508436 TGGCAAGCCAACAGACGA 59.492 55.556 12.11 0.00 44.12 4.20
2550 4851 0.753111 GGGGTGATGGTCAGAATGGC 60.753 60.000 0.00 0.00 42.54 4.40
2551 4852 0.921896 AGGGGTGATGGTCAGAATGG 59.078 55.000 0.00 0.00 36.16 3.16
2552 4853 1.133976 GGAGGGGTGATGGTCAGAATG 60.134 57.143 0.00 0.00 37.54 2.67
2553 4854 1.216990 GGAGGGGTGATGGTCAGAAT 58.783 55.000 0.00 0.00 0.00 2.40
2554 4855 0.914417 GGGAGGGGTGATGGTCAGAA 60.914 60.000 0.00 0.00 0.00 3.02
2555 4856 1.306997 GGGAGGGGTGATGGTCAGA 60.307 63.158 0.00 0.00 0.00 3.27
2556 4857 1.307343 AGGGAGGGGTGATGGTCAG 60.307 63.158 0.00 0.00 0.00 3.51
2557 4858 1.306997 GAGGGAGGGGTGATGGTCA 60.307 63.158 0.00 0.00 0.00 4.02
2558 4859 1.003573 AGAGGGAGGGGTGATGGTC 59.996 63.158 0.00 0.00 0.00 4.02
2559 4860 1.003573 GAGAGGGAGGGGTGATGGT 59.996 63.158 0.00 0.00 0.00 3.55
2560 4861 1.768077 GGAGAGGGAGGGGTGATGG 60.768 68.421 0.00 0.00 0.00 3.51
2561 4862 2.136878 CGGAGAGGGAGGGGTGATG 61.137 68.421 0.00 0.00 0.00 3.07
2567 4868 4.888325 ATGGCCGGAGAGGGAGGG 62.888 72.222 5.05 0.00 41.48 4.30
2568 4869 3.554342 CATGGCCGGAGAGGGAGG 61.554 72.222 5.05 0.00 41.48 4.30
2569 4870 4.247380 GCATGGCCGGAGAGGGAG 62.247 72.222 5.05 0.00 41.48 4.30
2586 4887 2.033194 GGAAAGAAGGCGACCACGG 61.033 63.158 0.00 0.00 40.15 4.94
2587 4888 1.004918 AGGAAAGAAGGCGACCACG 60.005 57.895 0.00 0.00 42.93 4.94
2588 4889 0.673956 GGAGGAAAGAAGGCGACCAC 60.674 60.000 0.00 0.00 0.00 4.16
2589 4890 0.836400 AGGAGGAAAGAAGGCGACCA 60.836 55.000 0.00 0.00 0.00 4.02
2590 4891 0.325272 AAGGAGGAAAGAAGGCGACC 59.675 55.000 0.00 0.00 0.00 4.79
2591 4892 1.443802 CAAGGAGGAAAGAAGGCGAC 58.556 55.000 0.00 0.00 0.00 5.19
2592 4893 0.321653 GCAAGGAGGAAAGAAGGCGA 60.322 55.000 0.00 0.00 0.00 5.54
2593 4894 1.308783 GGCAAGGAGGAAAGAAGGCG 61.309 60.000 0.00 0.00 0.00 5.52
2594 4895 0.038890 AGGCAAGGAGGAAAGAAGGC 59.961 55.000 0.00 0.00 0.00 4.35
2595 4896 1.352352 TGAGGCAAGGAGGAAAGAAGG 59.648 52.381 0.00 0.00 0.00 3.46
2596 4897 2.867109 TGAGGCAAGGAGGAAAGAAG 57.133 50.000 0.00 0.00 0.00 2.85
2598 4899 3.454858 ACTATGAGGCAAGGAGGAAAGA 58.545 45.455 0.00 0.00 0.00 2.52
2600 4901 3.587061 TGAACTATGAGGCAAGGAGGAAA 59.413 43.478 0.00 0.00 0.00 3.13
2603 4904 2.503356 AGTGAACTATGAGGCAAGGAGG 59.497 50.000 0.00 0.00 0.00 4.30
2604 4905 3.902881 AGTGAACTATGAGGCAAGGAG 57.097 47.619 0.00 0.00 0.00 3.69
2605 4906 3.582647 TCAAGTGAACTATGAGGCAAGGA 59.417 43.478 0.00 0.00 0.00 3.36
2606 4907 3.686726 GTCAAGTGAACTATGAGGCAAGG 59.313 47.826 0.00 0.00 0.00 3.61
2608 4909 4.284490 AGAGTCAAGTGAACTATGAGGCAA 59.716 41.667 0.00 0.00 0.00 4.52
2609 4910 3.834813 AGAGTCAAGTGAACTATGAGGCA 59.165 43.478 0.00 0.00 0.00 4.75
2613 4914 5.106277 CGTGGTAGAGTCAAGTGAACTATGA 60.106 44.000 0.00 0.00 0.00 2.15
2615 4916 4.765856 ACGTGGTAGAGTCAAGTGAACTAT 59.234 41.667 0.00 0.00 0.00 2.12
2616 4917 4.139786 ACGTGGTAGAGTCAAGTGAACTA 58.860 43.478 0.00 0.00 0.00 2.24
2618 4919 3.306818 GACGTGGTAGAGTCAAGTGAAC 58.693 50.000 0.00 0.00 37.34 3.18
2619 4920 2.295349 GGACGTGGTAGAGTCAAGTGAA 59.705 50.000 0.00 0.00 39.01 3.18
2620 4921 1.884579 GGACGTGGTAGAGTCAAGTGA 59.115 52.381 0.00 0.00 39.01 3.41
2621 4922 1.611977 TGGACGTGGTAGAGTCAAGTG 59.388 52.381 0.00 0.00 39.01 3.16
2623 4924 3.380479 TTTGGACGTGGTAGAGTCAAG 57.620 47.619 0.00 0.00 39.01 3.02
2624 4925 3.306502 GGATTTGGACGTGGTAGAGTCAA 60.307 47.826 0.00 0.00 39.01 3.18
2626 4927 2.418334 GGGATTTGGACGTGGTAGAGTC 60.418 54.545 0.00 0.00 36.70 3.36
2627 4928 1.553704 GGGATTTGGACGTGGTAGAGT 59.446 52.381 0.00 0.00 0.00 3.24
2630 4931 0.616371 TGGGGATTTGGACGTGGTAG 59.384 55.000 0.00 0.00 0.00 3.18
2631 4932 0.616371 CTGGGGATTTGGACGTGGTA 59.384 55.000 0.00 0.00 0.00 3.25
2633 4934 0.676782 GTCTGGGGATTTGGACGTGG 60.677 60.000 0.00 0.00 0.00 4.94
2634 4935 0.676782 GGTCTGGGGATTTGGACGTG 60.677 60.000 0.00 0.00 0.00 4.49
2636 4937 0.392998 CTGGTCTGGGGATTTGGACG 60.393 60.000 0.00 0.00 0.00 4.79
2637 4938 0.698818 ACTGGTCTGGGGATTTGGAC 59.301 55.000 0.00 0.00 0.00 4.02
2638 4939 0.991920 GACTGGTCTGGGGATTTGGA 59.008 55.000 0.00 0.00 0.00 3.53
2639 4940 0.698238 TGACTGGTCTGGGGATTTGG 59.302 55.000 2.38 0.00 0.00 3.28
2640 4941 2.584835 TTGACTGGTCTGGGGATTTG 57.415 50.000 2.38 0.00 0.00 2.32
2644 4945 2.335681 TACATTGACTGGTCTGGGGA 57.664 50.000 2.38 0.00 0.00 4.81
2645 4946 3.652057 AATACATTGACTGGTCTGGGG 57.348 47.619 2.38 0.00 0.00 4.96
2646 4947 4.164221 AGGTAATACATTGACTGGTCTGGG 59.836 45.833 2.38 0.00 0.00 4.45
2647 4948 5.104941 TGAGGTAATACATTGACTGGTCTGG 60.105 44.000 2.38 0.00 0.00 3.86
2649 4950 6.586344 CATGAGGTAATACATTGACTGGTCT 58.414 40.000 2.38 0.00 0.00 3.85
2651 4952 5.126067 GCATGAGGTAATACATTGACTGGT 58.874 41.667 0.00 0.00 0.00 4.00
2654 4955 5.994250 ACTGCATGAGGTAATACATTGACT 58.006 37.500 0.00 0.00 0.00 3.41
2655 4956 6.051717 AGACTGCATGAGGTAATACATTGAC 58.948 40.000 0.00 0.00 0.00 3.18
2656 4957 6.239217 AGACTGCATGAGGTAATACATTGA 57.761 37.500 0.00 0.00 0.00 2.57
2657 4958 6.932356 AAGACTGCATGAGGTAATACATTG 57.068 37.500 0.00 0.00 0.00 2.82
2658 4959 6.319658 CCAAAGACTGCATGAGGTAATACATT 59.680 38.462 0.00 0.00 0.00 2.71
2659 4960 5.824624 CCAAAGACTGCATGAGGTAATACAT 59.175 40.000 0.00 0.00 0.00 2.29
2660 4961 5.185454 CCAAAGACTGCATGAGGTAATACA 58.815 41.667 0.00 0.00 0.00 2.29
2661 4962 4.035675 GCCAAAGACTGCATGAGGTAATAC 59.964 45.833 0.00 0.00 0.00 1.89
2665 5193 1.630369 AGCCAAAGACTGCATGAGGTA 59.370 47.619 0.00 0.00 0.00 3.08
2675 5203 1.003233 GGAGCCGAAGCCAAAGACT 60.003 57.895 0.00 0.00 41.25 3.24
2676 5204 1.003233 AGGAGCCGAAGCCAAAGAC 60.003 57.895 0.00 0.00 41.25 3.01
2678 5206 1.746991 GGAGGAGCCGAAGCCAAAG 60.747 63.158 0.00 0.00 41.25 2.77
2688 5216 2.815647 CGTTGAAGCGGAGGAGCC 60.816 66.667 0.00 0.00 38.01 4.70
2690 5218 2.815647 GGCGTTGAAGCGGAGGAG 60.816 66.667 0.00 0.00 38.18 3.69
2691 5219 3.296709 GAGGCGTTGAAGCGGAGGA 62.297 63.158 0.00 0.00 38.18 3.71
2692 5220 2.815647 GAGGCGTTGAAGCGGAGG 60.816 66.667 0.00 0.00 38.18 4.30
2693 5221 2.815647 GGAGGCGTTGAAGCGGAG 60.816 66.667 0.00 0.00 38.18 4.63
2694 5222 4.388499 GGGAGGCGTTGAAGCGGA 62.388 66.667 0.00 0.00 38.18 5.54
2695 5223 4.394712 AGGGAGGCGTTGAAGCGG 62.395 66.667 0.00 0.00 38.18 5.52
2697 5225 0.466124 ATAGAGGGAGGCGTTGAAGC 59.534 55.000 0.00 0.00 0.00 3.86
2698 5226 2.035321 GAGATAGAGGGAGGCGTTGAAG 59.965 54.545 0.00 0.00 0.00 3.02
2699 5227 2.032620 GAGATAGAGGGAGGCGTTGAA 58.967 52.381 0.00 0.00 0.00 2.69
2702 5308 1.497286 AGAGAGATAGAGGGAGGCGTT 59.503 52.381 0.00 0.00 0.00 4.84
2704 5310 1.351017 AGAGAGAGATAGAGGGAGGCG 59.649 57.143 0.00 0.00 0.00 5.52
2706 5312 4.568380 CCATGAGAGAGAGATAGAGGGAGG 60.568 54.167 0.00 0.00 0.00 4.30
2708 5314 4.042809 GTCCATGAGAGAGAGATAGAGGGA 59.957 50.000 0.00 0.00 0.00 4.20
2709 5315 4.335416 GTCCATGAGAGAGAGATAGAGGG 58.665 52.174 0.00 0.00 0.00 4.30
2711 5317 4.893608 TCGTCCATGAGAGAGAGATAGAG 58.106 47.826 0.00 0.00 0.00 2.43
2715 5321 4.074259 CAGATCGTCCATGAGAGAGAGAT 58.926 47.826 0.00 0.00 0.00 2.75
2716 5322 3.475575 CAGATCGTCCATGAGAGAGAGA 58.524 50.000 0.00 0.00 0.00 3.10
2718 5324 2.580962 CCAGATCGTCCATGAGAGAGA 58.419 52.381 0.00 0.00 0.00 3.10
2719 5325 1.612950 CCCAGATCGTCCATGAGAGAG 59.387 57.143 0.00 0.00 0.00 3.20
2720 5326 1.697284 CCCAGATCGTCCATGAGAGA 58.303 55.000 0.00 0.00 0.00 3.10
2726 5332 3.550431 CCGCCCCAGATCGTCCAT 61.550 66.667 0.00 0.00 0.00 3.41
2728 5334 4.222847 GTCCGCCCCAGATCGTCC 62.223 72.222 0.00 0.00 0.00 4.79
2743 5349 3.443045 CTTGCCATGCCACCGGTC 61.443 66.667 2.59 0.00 0.00 4.79
2746 5352 3.993614 TAGCCTTGCCATGCCACCG 62.994 63.158 0.00 0.00 0.00 4.94
2747 5353 2.044053 TAGCCTTGCCATGCCACC 60.044 61.111 0.00 0.00 0.00 4.61
2748 5354 2.123428 CCTAGCCTTGCCATGCCAC 61.123 63.158 0.00 0.00 0.00 5.01
2749 5355 2.276409 CCTAGCCTTGCCATGCCA 59.724 61.111 0.00 0.00 0.00 4.92
2750 5356 2.520260 CCCTAGCCTTGCCATGCC 60.520 66.667 0.00 0.00 0.00 4.40
2751 5357 1.527844 CTCCCTAGCCTTGCCATGC 60.528 63.158 0.00 0.00 0.00 4.06
2753 5359 1.690219 CGTCTCCCTAGCCTTGCCAT 61.690 60.000 0.00 0.00 0.00 4.40
2754 5360 2.359169 CGTCTCCCTAGCCTTGCCA 61.359 63.158 0.00 0.00 0.00 4.92
2757 5363 1.517832 CACCGTCTCCCTAGCCTTG 59.482 63.158 0.00 0.00 0.00 3.61
2758 5364 1.686110 CCACCGTCTCCCTAGCCTT 60.686 63.158 0.00 0.00 0.00 4.35
2760 5366 3.155167 CCCACCGTCTCCCTAGCC 61.155 72.222 0.00 0.00 0.00 3.93
2761 5367 2.363925 ACCCACCGTCTCCCTAGC 60.364 66.667 0.00 0.00 0.00 3.42
2762 5368 2.722201 GCACCCACCGTCTCCCTAG 61.722 68.421 0.00 0.00 0.00 3.02
2763 5369 2.682494 GCACCCACCGTCTCCCTA 60.682 66.667 0.00 0.00 0.00 3.53
2766 5372 4.436998 CTCGCACCCACCGTCTCC 62.437 72.222 0.00 0.00 0.00 3.71
2767 5373 4.436998 CCTCGCACCCACCGTCTC 62.437 72.222 0.00 0.00 0.00 3.36
2784 5390 2.359967 ACGACTGCTTAGGGCTCCC 61.360 63.158 0.00 0.00 42.39 4.30
2785 5391 1.153549 CACGACTGCTTAGGGCTCC 60.154 63.158 0.00 0.00 42.39 4.70
2789 5395 1.258445 ACCTCCACGACTGCTTAGGG 61.258 60.000 0.00 0.00 0.00 3.53
2790 5396 0.608640 AACCTCCACGACTGCTTAGG 59.391 55.000 0.00 0.00 0.00 2.69
2792 5398 2.028748 GGTAAACCTCCACGACTGCTTA 60.029 50.000 0.00 0.00 0.00 3.09
2793 5399 1.270678 GGTAAACCTCCACGACTGCTT 60.271 52.381 0.00 0.00 0.00 3.91
2794 5400 0.320697 GGTAAACCTCCACGACTGCT 59.679 55.000 0.00 0.00 0.00 4.24
2795 5401 0.672711 GGGTAAACCTCCACGACTGC 60.673 60.000 0.00 0.00 35.85 4.40
2796 5402 0.682852 TGGGTAAACCTCCACGACTG 59.317 55.000 0.00 0.00 41.11 3.51
2797 5403 1.426751 TTGGGTAAACCTCCACGACT 58.573 50.000 0.00 0.00 41.11 4.18
2798 5404 2.081462 CATTGGGTAAACCTCCACGAC 58.919 52.381 0.00 0.00 41.11 4.34
2801 5407 4.219070 GGTAAACATTGGGTAAACCTCCAC 59.781 45.833 0.00 0.00 41.11 4.02
2802 5408 4.106663 AGGTAAACATTGGGTAAACCTCCA 59.893 41.667 0.00 0.00 39.38 3.86
2808 5414 9.184523 CTATTGATCAGGTAAACATTGGGTAAA 57.815 33.333 0.00 0.00 0.00 2.01
2809 5415 8.333235 ACTATTGATCAGGTAAACATTGGGTAA 58.667 33.333 0.00 0.00 0.00 2.85
2810 5416 7.773224 CACTATTGATCAGGTAAACATTGGGTA 59.227 37.037 0.00 0.00 0.00 3.69
2811 5417 6.603201 CACTATTGATCAGGTAAACATTGGGT 59.397 38.462 0.00 0.00 0.00 4.51
2812 5418 6.603201 ACACTATTGATCAGGTAAACATTGGG 59.397 38.462 0.00 0.00 0.00 4.12
2813 5419 7.630242 ACACTATTGATCAGGTAAACATTGG 57.370 36.000 0.00 0.00 0.00 3.16
2814 5420 7.970061 CCAACACTATTGATCAGGTAAACATTG 59.030 37.037 0.00 0.00 0.00 2.82
2815 5421 7.122650 CCCAACACTATTGATCAGGTAAACATT 59.877 37.037 0.00 0.00 0.00 2.71
2816 5422 6.603201 CCCAACACTATTGATCAGGTAAACAT 59.397 38.462 0.00 0.00 0.00 2.71
2817 5423 5.943416 CCCAACACTATTGATCAGGTAAACA 59.057 40.000 0.00 0.00 0.00 2.83
2818 5424 5.357032 CCCCAACACTATTGATCAGGTAAAC 59.643 44.000 0.00 0.00 0.00 2.01
2819 5425 5.014755 ACCCCAACACTATTGATCAGGTAAA 59.985 40.000 0.00 0.00 0.00 2.01
2820 5426 4.538490 ACCCCAACACTATTGATCAGGTAA 59.462 41.667 0.00 0.00 0.00 2.85
2821 5427 4.108570 ACCCCAACACTATTGATCAGGTA 58.891 43.478 0.00 0.00 0.00 3.08
2822 5428 2.919602 ACCCCAACACTATTGATCAGGT 59.080 45.455 0.00 0.00 0.00 4.00
2823 5429 3.652057 ACCCCAACACTATTGATCAGG 57.348 47.619 0.00 0.00 0.00 3.86
2824 5430 5.359194 AGTACCCCAACACTATTGATCAG 57.641 43.478 0.00 0.00 0.00 2.90
2825 5431 4.163458 GGAGTACCCCAACACTATTGATCA 59.837 45.833 0.00 0.00 0.00 2.92
2826 5432 4.163458 TGGAGTACCCCAACACTATTGATC 59.837 45.833 0.00 0.00 32.31 2.92
2827 5433 4.108570 TGGAGTACCCCAACACTATTGAT 58.891 43.478 0.00 0.00 32.31 2.57
2828 5434 3.517901 CTGGAGTACCCCAACACTATTGA 59.482 47.826 0.00 0.00 35.47 2.57
2829 5435 3.370527 CCTGGAGTACCCCAACACTATTG 60.371 52.174 0.00 0.00 35.47 1.90
2830 5436 2.844348 CCTGGAGTACCCCAACACTATT 59.156 50.000 0.00 0.00 35.47 1.73
2831 5437 2.225805 ACCTGGAGTACCCCAACACTAT 60.226 50.000 0.00 0.00 35.47 2.12
2832 5438 1.150560 ACCTGGAGTACCCCAACACTA 59.849 52.381 0.00 0.00 35.47 2.74
2833 5439 0.104620 ACCTGGAGTACCCCAACACT 60.105 55.000 0.00 0.00 35.47 3.55
2834 5440 0.036306 CACCTGGAGTACCCCAACAC 59.964 60.000 0.00 0.00 35.47 3.32
2835 5441 1.131303 CCACCTGGAGTACCCCAACA 61.131 60.000 0.00 0.00 35.47 3.33
2836 5442 1.683441 CCACCTGGAGTACCCCAAC 59.317 63.158 0.00 0.00 35.47 3.77
2837 5443 2.228480 GCCACCTGGAGTACCCCAA 61.228 63.158 0.00 0.00 35.47 4.12
2838 5444 2.609610 GCCACCTGGAGTACCCCA 60.610 66.667 0.00 0.00 37.39 4.96
2839 5445 3.408853 GGCCACCTGGAGTACCCC 61.409 72.222 0.00 0.00 37.39 4.95
2840 5446 3.408853 GGGCCACCTGGAGTACCC 61.409 72.222 4.39 1.86 36.99 3.69
2841 5447 3.782443 CGGGCCACCTGGAGTACC 61.782 72.222 4.39 0.00 37.39 3.34
2842 5448 2.682494 TCGGGCCACCTGGAGTAC 60.682 66.667 4.39 0.00 37.39 2.73
2843 5449 2.363795 CTCGGGCCACCTGGAGTA 60.364 66.667 4.39 0.00 37.39 2.59
2846 5452 4.649705 TTCCTCGGGCCACCTGGA 62.650 66.667 4.39 3.19 37.39 3.86
2847 5453 4.101448 CTTCCTCGGGCCACCTGG 62.101 72.222 4.39 0.33 38.53 4.45
2848 5454 4.101448 CCTTCCTCGGGCCACCTG 62.101 72.222 4.39 0.00 33.28 4.00
2849 5455 3.864983 TTCCTTCCTCGGGCCACCT 62.865 63.158 4.39 0.00 33.28 4.00
2850 5456 2.610532 GATTCCTTCCTCGGGCCACC 62.611 65.000 4.39 0.00 0.00 4.61
2851 5457 1.153147 GATTCCTTCCTCGGGCCAC 60.153 63.158 4.39 0.00 0.00 5.01
2852 5458 2.731571 CGATTCCTTCCTCGGGCCA 61.732 63.158 4.39 0.00 0.00 5.36
2853 5459 1.968050 TTCGATTCCTTCCTCGGGCC 61.968 60.000 0.00 0.00 35.64 5.80
2854 5460 0.107848 TTTCGATTCCTTCCTCGGGC 60.108 55.000 0.00 0.00 35.64 6.13
2855 5461 1.653151 GTTTCGATTCCTTCCTCGGG 58.347 55.000 0.00 0.00 35.64 5.14
2856 5462 1.653151 GGTTTCGATTCCTTCCTCGG 58.347 55.000 0.00 0.00 35.64 4.63
2857 5463 1.207329 AGGGTTTCGATTCCTTCCTCG 59.793 52.381 6.40 0.00 36.25 4.63
2858 5464 3.705072 TCTAGGGTTTCGATTCCTTCCTC 59.295 47.826 6.97 0.00 32.46 3.71
2859 5465 3.721021 TCTAGGGTTTCGATTCCTTCCT 58.279 45.455 6.97 2.32 32.46 3.36
2860 5466 4.101119 TGATCTAGGGTTTCGATTCCTTCC 59.899 45.833 6.97 0.00 32.46 3.46
2861 5467 5.051153 GTGATCTAGGGTTTCGATTCCTTC 58.949 45.833 6.97 1.38 32.46 3.46
2862 5468 4.717280 AGTGATCTAGGGTTTCGATTCCTT 59.283 41.667 6.97 2.40 32.46 3.36
2863 5469 4.100189 CAGTGATCTAGGGTTTCGATTCCT 59.900 45.833 6.88 6.88 34.85 3.36
2864 5470 4.141914 ACAGTGATCTAGGGTTTCGATTCC 60.142 45.833 0.00 0.00 0.00 3.01
2865 5471 5.012328 ACAGTGATCTAGGGTTTCGATTC 57.988 43.478 0.00 0.00 0.00 2.52
2866 5472 5.452077 GCTACAGTGATCTAGGGTTTCGATT 60.452 44.000 0.00 0.00 0.00 3.34
2867 5473 4.038162 GCTACAGTGATCTAGGGTTTCGAT 59.962 45.833 0.00 0.00 0.00 3.59
2868 5474 3.380637 GCTACAGTGATCTAGGGTTTCGA 59.619 47.826 0.00 0.00 0.00 3.71
2869 5475 3.491104 GGCTACAGTGATCTAGGGTTTCG 60.491 52.174 0.00 0.00 0.00 3.46
2870 5476 3.451178 TGGCTACAGTGATCTAGGGTTTC 59.549 47.826 0.00 0.00 0.00 2.78
2871 5477 3.450904 TGGCTACAGTGATCTAGGGTTT 58.549 45.455 0.00 0.00 0.00 3.27
2872 5478 3.034635 CTGGCTACAGTGATCTAGGGTT 58.965 50.000 0.00 0.00 39.92 4.11
2873 5479 2.245028 TCTGGCTACAGTGATCTAGGGT 59.755 50.000 0.00 0.00 45.14 4.34
2874 5480 2.950781 TCTGGCTACAGTGATCTAGGG 58.049 52.381 0.00 0.00 45.14 3.53
2875 5481 3.509575 GGATCTGGCTACAGTGATCTAGG 59.490 52.174 0.00 0.00 45.14 3.02
2876 5482 4.148079 TGGATCTGGCTACAGTGATCTAG 58.852 47.826 0.00 0.00 45.14 2.43
2877 5483 4.148079 CTGGATCTGGCTACAGTGATCTA 58.852 47.826 0.00 0.00 45.14 1.98
2878 5484 2.964464 CTGGATCTGGCTACAGTGATCT 59.036 50.000 0.00 0.00 45.14 2.75
2879 5485 2.036992 CCTGGATCTGGCTACAGTGATC 59.963 54.545 0.00 0.00 45.14 2.92
2880 5486 2.045524 CCTGGATCTGGCTACAGTGAT 58.954 52.381 0.00 0.00 45.14 3.06
2881 5487 1.007118 TCCTGGATCTGGCTACAGTGA 59.993 52.381 0.00 0.00 45.14 3.41
2882 5488 1.489481 TCCTGGATCTGGCTACAGTG 58.511 55.000 0.00 0.00 45.14 3.66
2883 5489 1.834263 GTTCCTGGATCTGGCTACAGT 59.166 52.381 0.00 0.00 45.14 3.55
2884 5490 1.833630 TGTTCCTGGATCTGGCTACAG 59.166 52.381 0.00 0.00 46.30 2.74
2885 5491 1.951209 TGTTCCTGGATCTGGCTACA 58.049 50.000 0.00 0.00 0.00 2.74
2886 5492 2.027192 TGTTGTTCCTGGATCTGGCTAC 60.027 50.000 0.00 0.00 0.00 3.58
2887 5493 2.265367 TGTTGTTCCTGGATCTGGCTA 58.735 47.619 0.00 0.00 0.00 3.93
2890 5496 2.862541 TGTTGTTGTTCCTGGATCTGG 58.137 47.619 0.00 0.00 0.00 3.86
2895 5501 2.025793 TGAGGTTGTTGTTGTTCCTGGA 60.026 45.455 0.00 0.00 0.00 3.86
2901 5507 3.319405 TGTTGTGTGAGGTTGTTGTTGTT 59.681 39.130 0.00 0.00 0.00 2.83
2902 5508 2.887783 TGTTGTGTGAGGTTGTTGTTGT 59.112 40.909 0.00 0.00 0.00 3.32
2903 5509 3.241701 GTGTTGTGTGAGGTTGTTGTTG 58.758 45.455 0.00 0.00 0.00 3.33
2904 5510 2.230266 GGTGTTGTGTGAGGTTGTTGTT 59.770 45.455 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.