Multiple sequence alignment - TraesCS2A01G491700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G491700 chr2A 100.000 2942 0 0 1 2942 724418721 724415780 0.000000e+00 5433.0
1 TraesCS2A01G491700 chr2A 85.847 968 104 22 970 1921 724425580 724424630 0.000000e+00 998.0
2 TraesCS2A01G491700 chr2A 83.122 948 142 11 972 1915 724397879 724398812 0.000000e+00 848.0
3 TraesCS2A01G491700 chr2A 82.723 955 141 14 972 1921 724380604 724381539 0.000000e+00 828.0
4 TraesCS2A01G491700 chr2A 87.124 699 52 16 1922 2587 124206353 124207046 0.000000e+00 758.0
5 TraesCS2A01G491700 chr2A 93.421 304 18 1 2641 2942 201000457 201000154 1.610000e-122 449.0
6 TraesCS2A01G491700 chr2D 86.966 1849 143 59 110 1921 590087842 590086055 0.000000e+00 1989.0
7 TraesCS2A01G491700 chr2D 85.642 982 102 21 956 1921 590091974 590091016 0.000000e+00 996.0
8 TraesCS2A01G491700 chr2D 83.966 948 134 11 972 1915 590081051 590081984 0.000000e+00 893.0
9 TraesCS2A01G491700 chr2D 93.092 304 17 2 2641 2942 188010830 188010529 2.690000e-120 442.0
10 TraesCS2A01G491700 chr2D 81.818 242 33 8 931 1172 590092987 590092757 2.990000e-45 193.0
11 TraesCS2A01G491700 chr2B 89.500 1181 89 15 745 1921 714519547 714518398 0.000000e+00 1461.0
12 TraesCS2A01G491700 chr2B 85.403 918 97 13 1019 1921 714523327 714522432 0.000000e+00 918.0
13 TraesCS2A01G491700 chr2B 84.017 951 131 13 972 1915 714502167 714503103 0.000000e+00 894.0
14 TraesCS2A01G491700 chr3B 88.731 1056 79 16 1921 2942 820189019 820190068 0.000000e+00 1254.0
15 TraesCS2A01G491700 chr3B 100.000 28 0 0 1920 1947 808790678 808790705 5.000000e-03 52.8
16 TraesCS2A01G491700 chr7D 88.196 1059 80 30 1920 2942 617651113 617652162 0.000000e+00 1221.0
17 TraesCS2A01G491700 chr3A 87.890 1057 84 26 1921 2942 9193123 9194170 0.000000e+00 1203.0
18 TraesCS2A01G491700 chr3A 87.678 1055 86 29 1922 2942 630833867 630834911 0.000000e+00 1188.0
19 TraesCS2A01G491700 chr3A 87.051 1058 91 27 1921 2942 630856125 630857172 0.000000e+00 1153.0
20 TraesCS2A01G491700 chr3A 86.840 1041 92 26 1915 2919 715675844 715674813 0.000000e+00 1122.0
21 TraesCS2A01G491700 chr5A 87.403 1032 79 20 1923 2919 688115668 688114653 0.000000e+00 1138.0
22 TraesCS2A01G491700 chr1A 87.286 700 52 15 1920 2587 488648826 488649520 0.000000e+00 765.0
23 TraesCS2A01G491700 chr4A 77.473 182 21 9 2577 2740 321922456 321922635 1.120000e-14 91.6
24 TraesCS2A01G491700 chr4B 83.000 100 13 4 2641 2740 496287929 496288024 1.450000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G491700 chr2A 724415780 724418721 2941 True 5433.000000 5433 100.000000 1 2942 1 chr2A.!!$R2 2941
1 TraesCS2A01G491700 chr2A 724424630 724425580 950 True 998.000000 998 85.847000 970 1921 1 chr2A.!!$R3 951
2 TraesCS2A01G491700 chr2A 724397879 724398812 933 False 848.000000 848 83.122000 972 1915 1 chr2A.!!$F3 943
3 TraesCS2A01G491700 chr2A 724380604 724381539 935 False 828.000000 828 82.723000 972 1921 1 chr2A.!!$F2 949
4 TraesCS2A01G491700 chr2A 124206353 124207046 693 False 758.000000 758 87.124000 1922 2587 1 chr2A.!!$F1 665
5 TraesCS2A01G491700 chr2D 590086055 590092987 6932 True 1059.333333 1989 84.808667 110 1921 3 chr2D.!!$R2 1811
6 TraesCS2A01G491700 chr2D 590081051 590081984 933 False 893.000000 893 83.966000 972 1915 1 chr2D.!!$F1 943
7 TraesCS2A01G491700 chr2B 714518398 714523327 4929 True 1189.500000 1461 87.451500 745 1921 2 chr2B.!!$R1 1176
8 TraesCS2A01G491700 chr2B 714502167 714503103 936 False 894.000000 894 84.017000 972 1915 1 chr2B.!!$F1 943
9 TraesCS2A01G491700 chr3B 820189019 820190068 1049 False 1254.000000 1254 88.731000 1921 2942 1 chr3B.!!$F2 1021
10 TraesCS2A01G491700 chr7D 617651113 617652162 1049 False 1221.000000 1221 88.196000 1920 2942 1 chr7D.!!$F1 1022
11 TraesCS2A01G491700 chr3A 9193123 9194170 1047 False 1203.000000 1203 87.890000 1921 2942 1 chr3A.!!$F1 1021
12 TraesCS2A01G491700 chr3A 630833867 630834911 1044 False 1188.000000 1188 87.678000 1922 2942 1 chr3A.!!$F2 1020
13 TraesCS2A01G491700 chr3A 630856125 630857172 1047 False 1153.000000 1153 87.051000 1921 2942 1 chr3A.!!$F3 1021
14 TraesCS2A01G491700 chr3A 715674813 715675844 1031 True 1122.000000 1122 86.840000 1915 2919 1 chr3A.!!$R1 1004
15 TraesCS2A01G491700 chr5A 688114653 688115668 1015 True 1138.000000 1138 87.403000 1923 2919 1 chr5A.!!$R1 996
16 TraesCS2A01G491700 chr1A 488648826 488649520 694 False 765.000000 765 87.286000 1920 2587 1 chr1A.!!$F1 667

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
864 1195 0.033504 AACGACGTGCCATCAGTTCT 59.966 50.0 0.0 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2513 8591 1.228154 GAGTTGTTTCGTGGCCCCT 60.228 57.895 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.697250 CGCAAAAGAATTACAAATAGTATTCGA 57.303 29.630 0.00 0.00 31.53 3.71
91 92 9.825972 TTGAAAACACGAAAATTTTAAAATGCA 57.174 22.222 14.04 0.00 0.00 3.96
92 93 9.825972 TGAAAACACGAAAATTTTAAAATGCAA 57.174 22.222 14.04 0.00 0.00 4.08
95 96 9.994432 AAACACGAAAATTTTAAAATGCAATCA 57.006 22.222 14.04 0.00 0.00 2.57
130 131 8.766000 AAAGTTTAACATTGTTTCGAAAAGGT 57.234 26.923 13.10 2.89 0.00 3.50
131 132 7.749539 AGTTTAACATTGTTTCGAAAAGGTG 57.250 32.000 13.10 13.10 0.00 4.00
132 133 7.540299 AGTTTAACATTGTTTCGAAAAGGTGA 58.460 30.769 13.10 0.00 0.00 4.02
133 134 7.700656 AGTTTAACATTGTTTCGAAAAGGTGAG 59.299 33.333 13.10 3.70 0.00 3.51
136 137 4.037923 ACATTGTTTCGAAAAGGTGAGCAT 59.962 37.500 13.10 0.00 0.00 3.79
137 138 4.647424 TTGTTTCGAAAAGGTGAGCATT 57.353 36.364 13.10 0.00 0.00 3.56
138 139 4.647424 TGTTTCGAAAAGGTGAGCATTT 57.353 36.364 13.10 0.00 0.00 2.32
140 141 5.415221 TGTTTCGAAAAGGTGAGCATTTTT 58.585 33.333 13.10 0.00 38.49 1.94
167 168 9.434420 TCAGATTGCATACATTTTTAAAAAGGG 57.566 29.630 24.41 17.74 34.27 3.95
169 170 9.657419 AGATTGCATACATTTTTAAAAAGGGAG 57.343 29.630 24.41 15.96 34.27 4.30
172 173 7.393216 TGCATACATTTTTAAAAAGGGAGCAT 58.607 30.769 24.41 12.00 33.48 3.79
173 174 7.882271 TGCATACATTTTTAAAAAGGGAGCATT 59.118 29.630 24.41 9.01 33.48 3.56
174 175 8.729756 GCATACATTTTTAAAAAGGGAGCATTT 58.270 29.630 24.41 8.42 34.27 2.32
222 223 9.709600 TCAAAAGTTGAAAGTTTTTGAAAACAC 57.290 25.926 18.41 9.38 43.73 3.32
238 239 9.823098 TTTGAAAACACAAAATTGTTTCAGATG 57.177 25.926 10.20 0.00 46.68 2.90
239 240 8.545229 TGAAAACACAAAATTGTTTCAGATGT 57.455 26.923 7.46 0.00 46.68 3.06
240 241 8.441608 TGAAAACACAAAATTGTTTCAGATGTG 58.558 29.630 7.46 0.00 46.68 3.21
241 242 5.971895 ACACAAAATTGTTTCAGATGTGC 57.028 34.783 0.00 0.00 39.91 4.57
243 244 4.739228 CACAAAATTGTTTCAGATGTGCGA 59.261 37.500 0.00 0.00 39.91 5.10
245 246 5.459762 ACAAAATTGTTTCAGATGTGCGAAG 59.540 36.000 0.00 0.00 38.47 3.79
246 247 3.837213 ATTGTTTCAGATGTGCGAAGG 57.163 42.857 0.00 0.00 0.00 3.46
249 250 2.151202 GTTTCAGATGTGCGAAGGGAA 58.849 47.619 0.00 0.00 0.00 3.97
250 251 2.749621 GTTTCAGATGTGCGAAGGGAAT 59.250 45.455 0.00 0.00 0.00 3.01
252 253 4.422073 TTCAGATGTGCGAAGGGAATAT 57.578 40.909 0.00 0.00 0.00 1.28
253 254 4.422073 TCAGATGTGCGAAGGGAATATT 57.578 40.909 0.00 0.00 0.00 1.28
254 255 4.780815 TCAGATGTGCGAAGGGAATATTT 58.219 39.130 0.00 0.00 0.00 1.40
255 256 5.192927 TCAGATGTGCGAAGGGAATATTTT 58.807 37.500 0.00 0.00 0.00 1.82
256 257 5.652014 TCAGATGTGCGAAGGGAATATTTTT 59.348 36.000 0.00 0.00 0.00 1.94
257 258 5.973565 CAGATGTGCGAAGGGAATATTTTTC 59.026 40.000 0.00 0.00 0.00 2.29
258 259 5.652014 AGATGTGCGAAGGGAATATTTTTCA 59.348 36.000 0.00 0.00 0.00 2.69
259 260 5.713792 TGTGCGAAGGGAATATTTTTCAA 57.286 34.783 0.00 0.00 0.00 2.69
260 261 6.090483 TGTGCGAAGGGAATATTTTTCAAA 57.910 33.333 0.00 0.00 0.00 2.69
261 262 6.696411 TGTGCGAAGGGAATATTTTTCAAAT 58.304 32.000 0.00 0.00 0.00 2.32
262 263 7.158021 TGTGCGAAGGGAATATTTTTCAAATT 58.842 30.769 0.00 0.00 0.00 1.82
263 264 7.659390 TGTGCGAAGGGAATATTTTTCAAATTT 59.341 29.630 0.00 0.00 0.00 1.82
264 265 7.956943 GTGCGAAGGGAATATTTTTCAAATTTG 59.043 33.333 12.15 12.15 0.00 2.32
265 266 7.659390 TGCGAAGGGAATATTTTTCAAATTTGT 59.341 29.630 17.47 0.93 0.00 2.83
266 267 7.956943 GCGAAGGGAATATTTTTCAAATTTGTG 59.043 33.333 17.47 0.00 0.00 3.33
267 268 9.202273 CGAAGGGAATATTTTTCAAATTTGTGA 57.798 29.630 17.47 5.60 0.00 3.58
334 335 9.726438 TTTTTGAGTTTCCTAACAAATTTTGGA 57.274 25.926 13.42 0.00 36.70 3.53
335 336 9.726438 TTTTGAGTTTCCTAACAAATTTTGGAA 57.274 25.926 13.42 4.62 36.70 3.53
336 337 8.710835 TTGAGTTTCCTAACAAATTTTGGAAC 57.289 30.769 13.42 7.87 36.65 3.62
337 338 7.841956 TGAGTTTCCTAACAAATTTTGGAACA 58.158 30.769 13.42 0.48 36.65 3.18
338 339 8.314751 TGAGTTTCCTAACAAATTTTGGAACAA 58.685 29.630 13.42 0.00 39.34 2.83
339 340 8.716646 AGTTTCCTAACAAATTTTGGAACAAG 57.283 30.769 13.42 3.61 39.34 3.16
340 341 7.768582 AGTTTCCTAACAAATTTTGGAACAAGG 59.231 33.333 13.42 11.05 39.34 3.61
341 342 7.766738 GTTTCCTAACAAATTTTGGAACAAGGA 59.233 33.333 13.42 12.77 37.64 3.36
376 377 9.713740 TGAAATTCCGAAACATTTTTGAATTTG 57.286 25.926 20.66 0.00 38.84 2.32
377 378 9.715123 GAAATTCCGAAACATTTTTGAATTTGT 57.285 25.926 20.66 8.27 38.84 2.83
378 379 9.715123 AAATTCCGAAACATTTTTGAATTTGTC 57.285 25.926 17.74 0.00 38.18 3.18
379 380 7.834068 TTCCGAAACATTTTTGAATTTGTCA 57.166 28.000 0.00 0.00 0.00 3.58
380 381 7.834068 TCCGAAACATTTTTGAATTTGTCAA 57.166 28.000 0.00 0.00 44.74 3.18
381 382 8.430801 TCCGAAACATTTTTGAATTTGTCAAT 57.569 26.923 0.00 0.00 45.71 2.57
382 383 9.534565 TCCGAAACATTTTTGAATTTGTCAATA 57.465 25.926 0.00 0.00 45.71 1.90
568 899 4.561735 TTTTAAAGCGGACCTGAACTTG 57.438 40.909 0.00 0.00 0.00 3.16
569 900 2.922740 TAAAGCGGACCTGAACTTGT 57.077 45.000 0.00 0.00 0.00 3.16
570 901 1.594331 AAAGCGGACCTGAACTTGTC 58.406 50.000 0.00 0.00 0.00 3.18
583 914 4.457466 TGAACTTGTCAGGACCTTTAACC 58.543 43.478 0.00 0.00 0.00 2.85
584 915 4.165372 TGAACTTGTCAGGACCTTTAACCT 59.835 41.667 0.00 0.00 36.92 3.50
585 916 4.790718 ACTTGTCAGGACCTTTAACCTT 57.209 40.909 0.00 0.00 33.91 3.50
587 918 4.412528 ACTTGTCAGGACCTTTAACCTTCT 59.587 41.667 0.00 0.00 33.91 2.85
588 919 5.605488 ACTTGTCAGGACCTTTAACCTTCTA 59.395 40.000 0.00 0.00 33.91 2.10
589 920 5.740290 TGTCAGGACCTTTAACCTTCTAG 57.260 43.478 0.00 0.00 33.91 2.43
590 921 5.399991 TGTCAGGACCTTTAACCTTCTAGA 58.600 41.667 0.00 0.00 33.91 2.43
591 922 5.842328 TGTCAGGACCTTTAACCTTCTAGAA 59.158 40.000 4.81 4.81 33.91 2.10
592 923 6.014499 TGTCAGGACCTTTAACCTTCTAGAAG 60.014 42.308 23.31 23.31 38.14 2.85
605 936 3.294038 TCTAGAAGGTCCTAGAACCGG 57.706 52.381 0.00 0.00 44.49 5.28
606 937 2.848694 TCTAGAAGGTCCTAGAACCGGA 59.151 50.000 9.46 0.00 44.49 5.14
609 940 3.218227 GGTCCTAGAACCGGAGCC 58.782 66.667 9.46 0.00 41.90 4.70
611 942 1.677637 GGTCCTAGAACCGGAGCCAG 61.678 65.000 9.46 0.00 41.90 4.85
612 943 2.058595 TCCTAGAACCGGAGCCAGC 61.059 63.158 9.46 0.00 0.00 4.85
613 944 2.060980 CCTAGAACCGGAGCCAGCT 61.061 63.158 9.46 0.00 0.00 4.24
614 945 1.439644 CTAGAACCGGAGCCAGCTC 59.560 63.158 9.46 11.28 42.04 4.09
625 956 3.004752 GAGCCAGCTCCAATTTTCCTA 57.995 47.619 8.51 0.00 37.11 2.94
626 957 2.948315 GAGCCAGCTCCAATTTTCCTAG 59.052 50.000 8.51 0.00 37.11 3.02
627 958 1.406898 GCCAGCTCCAATTTTCCTAGC 59.593 52.381 0.00 0.00 0.00 3.42
628 959 2.726821 CCAGCTCCAATTTTCCTAGCA 58.273 47.619 0.00 0.00 35.63 3.49
629 960 3.091545 CCAGCTCCAATTTTCCTAGCAA 58.908 45.455 0.00 0.00 35.63 3.91
630 961 3.511146 CCAGCTCCAATTTTCCTAGCAAA 59.489 43.478 0.00 0.00 35.63 3.68
631 962 4.161001 CCAGCTCCAATTTTCCTAGCAAAT 59.839 41.667 0.00 0.00 35.63 2.32
632 963 5.107133 CAGCTCCAATTTTCCTAGCAAATG 58.893 41.667 0.00 0.00 35.63 2.32
633 964 4.161001 AGCTCCAATTTTCCTAGCAAATGG 59.839 41.667 0.00 0.00 35.63 3.16
635 966 3.197549 TCCAATTTTCCTAGCAAATGGGC 59.802 43.478 11.74 0.00 35.39 5.36
637 968 4.186159 CAATTTTCCTAGCAAATGGGCTG 58.814 43.478 1.82 0.00 45.44 4.85
638 969 1.851304 TTTCCTAGCAAATGGGCTGG 58.149 50.000 1.82 0.00 45.44 4.85
639 970 0.684153 TTCCTAGCAAATGGGCTGGC 60.684 55.000 1.82 0.00 45.44 4.85
640 971 2.129785 CCTAGCAAATGGGCTGGCC 61.130 63.158 14.23 14.23 45.44 5.36
650 981 4.864334 GGCTGGCCCTGGTCGATG 62.864 72.222 0.00 0.00 0.00 3.84
651 982 3.785859 GCTGGCCCTGGTCGATGA 61.786 66.667 0.00 0.00 0.00 2.92
653 984 2.606213 TGGCCCTGGTCGATGACA 60.606 61.111 0.00 0.00 33.68 3.58
654 985 2.125106 GGCCCTGGTCGATGACAC 60.125 66.667 0.00 0.00 33.68 3.67
656 987 1.448540 GCCCTGGTCGATGACACAG 60.449 63.158 0.00 4.34 33.68 3.66
657 988 1.888436 GCCCTGGTCGATGACACAGA 61.888 60.000 13.49 0.00 34.88 3.41
658 989 0.608130 CCCTGGTCGATGACACAGAA 59.392 55.000 13.49 0.00 34.88 3.02
659 990 1.001974 CCCTGGTCGATGACACAGAAA 59.998 52.381 13.49 0.00 34.88 2.52
660 991 2.069273 CCTGGTCGATGACACAGAAAC 58.931 52.381 13.49 0.00 34.88 2.78
662 993 0.438830 GGTCGATGACACAGAAACGC 59.561 55.000 0.00 0.00 33.68 4.84
664 995 0.669318 TCGATGACACAGAAACGCCC 60.669 55.000 0.00 0.00 0.00 6.13
665 996 0.948623 CGATGACACAGAAACGCCCA 60.949 55.000 0.00 0.00 0.00 5.36
669 1000 1.606668 TGACACAGAAACGCCCAATTC 59.393 47.619 0.00 0.00 0.00 2.17
670 1001 0.958822 ACACAGAAACGCCCAATTCC 59.041 50.000 0.00 0.00 0.00 3.01
671 1002 0.243636 CACAGAAACGCCCAATTCCC 59.756 55.000 0.00 0.00 0.00 3.97
672 1003 1.241315 ACAGAAACGCCCAATTCCCG 61.241 55.000 0.00 0.00 0.00 5.14
673 1004 1.677633 AGAAACGCCCAATTCCCGG 60.678 57.895 0.00 0.00 0.00 5.73
675 1006 1.000145 AAACGCCCAATTCCCGGAT 60.000 52.632 0.73 0.00 0.00 4.18
676 1007 0.613572 AAACGCCCAATTCCCGGATT 60.614 50.000 0.73 0.00 0.00 3.01
677 1008 1.035385 AACGCCCAATTCCCGGATTC 61.035 55.000 0.73 0.00 0.00 2.52
678 1009 2.542907 CGCCCAATTCCCGGATTCG 61.543 63.158 0.73 0.00 0.00 3.34
680 1011 1.444917 GCCCAATTCCCGGATTCGTC 61.445 60.000 0.73 0.00 33.95 4.20
681 1012 0.180406 CCCAATTCCCGGATTCGTCT 59.820 55.000 0.73 0.00 33.95 4.18
682 1013 1.299541 CCAATTCCCGGATTCGTCTG 58.700 55.000 0.73 0.00 33.95 3.51
683 1014 1.406887 CCAATTCCCGGATTCGTCTGT 60.407 52.381 0.73 0.00 33.95 3.41
684 1015 1.933853 CAATTCCCGGATTCGTCTGTC 59.066 52.381 0.73 0.00 33.95 3.51
685 1016 1.486211 ATTCCCGGATTCGTCTGTCT 58.514 50.000 0.73 0.00 33.95 3.41
686 1017 1.263356 TTCCCGGATTCGTCTGTCTT 58.737 50.000 0.73 0.00 33.95 3.01
687 1018 0.530744 TCCCGGATTCGTCTGTCTTG 59.469 55.000 0.73 0.00 33.95 3.02
688 1019 0.460284 CCCGGATTCGTCTGTCTTGG 60.460 60.000 0.73 0.00 33.95 3.61
689 1020 0.460284 CCGGATTCGTCTGTCTTGGG 60.460 60.000 0.00 0.00 33.95 4.12
691 1022 0.250513 GGATTCGTCTGTCTTGGGCT 59.749 55.000 0.00 0.00 0.00 5.19
692 1023 1.363744 GATTCGTCTGTCTTGGGCTG 58.636 55.000 0.00 0.00 0.00 4.85
693 1024 0.036010 ATTCGTCTGTCTTGGGCTGG 60.036 55.000 0.00 0.00 0.00 4.85
694 1025 2.731691 TTCGTCTGTCTTGGGCTGGC 62.732 60.000 0.00 0.00 0.00 4.85
695 1026 2.360475 GTCTGTCTTGGGCTGGCC 60.360 66.667 14.23 14.23 0.00 5.36
696 1027 2.530151 TCTGTCTTGGGCTGGCCT 60.530 61.111 21.72 0.00 36.10 5.19
697 1028 2.156098 TCTGTCTTGGGCTGGCCTT 61.156 57.895 21.72 0.00 36.10 4.35
699 1030 1.228552 TGTCTTGGGCTGGCCTTTC 60.229 57.895 21.72 9.57 36.10 2.62
700 1031 1.228552 GTCTTGGGCTGGCCTTTCA 60.229 57.895 21.72 0.00 36.10 2.69
701 1032 0.827507 GTCTTGGGCTGGCCTTTCAA 60.828 55.000 21.72 6.20 36.10 2.69
702 1033 0.114954 TCTTGGGCTGGCCTTTCAAT 59.885 50.000 21.72 0.00 36.10 2.57
703 1034 0.533951 CTTGGGCTGGCCTTTCAATC 59.466 55.000 21.72 0.00 36.10 2.67
704 1035 0.114954 TTGGGCTGGCCTTTCAATCT 59.885 50.000 21.72 0.00 36.10 2.40
705 1036 0.612732 TGGGCTGGCCTTTCAATCTG 60.613 55.000 21.72 0.00 36.10 2.90
706 1037 0.323725 GGGCTGGCCTTTCAATCTGA 60.324 55.000 13.80 0.00 36.10 3.27
708 1039 0.455005 GCTGGCCTTTCAATCTGAGC 59.545 55.000 3.32 0.00 0.00 4.26
709 1040 0.731417 CTGGCCTTTCAATCTGAGCG 59.269 55.000 3.32 0.00 0.00 5.03
711 1042 1.271325 TGGCCTTTCAATCTGAGCGAA 60.271 47.619 3.32 0.00 0.00 4.70
712 1043 1.812571 GGCCTTTCAATCTGAGCGAAA 59.187 47.619 0.00 4.75 0.00 3.46
715 1046 3.127548 GCCTTTCAATCTGAGCGAAATCA 59.872 43.478 5.15 0.00 0.00 2.57
716 1047 4.730035 GCCTTTCAATCTGAGCGAAATCAG 60.730 45.833 6.43 6.43 46.70 2.90
717 1048 4.394300 CCTTTCAATCTGAGCGAAATCAGT 59.606 41.667 11.10 0.00 45.70 3.41
718 1049 5.106396 CCTTTCAATCTGAGCGAAATCAGTT 60.106 40.000 11.10 2.69 45.70 3.16
719 1050 5.536554 TTCAATCTGAGCGAAATCAGTTC 57.463 39.130 11.10 0.00 45.70 3.01
721 1052 4.867047 TCAATCTGAGCGAAATCAGTTCTC 59.133 41.667 11.10 0.00 45.70 2.87
722 1053 3.238108 TCTGAGCGAAATCAGTTCTCC 57.762 47.619 11.10 0.00 45.70 3.71
723 1054 2.562738 TCTGAGCGAAATCAGTTCTCCA 59.437 45.455 11.10 0.00 45.70 3.86
725 1056 4.402474 TCTGAGCGAAATCAGTTCTCCATA 59.598 41.667 11.10 0.00 45.70 2.74
728 1059 5.937540 TGAGCGAAATCAGTTCTCCATAAAA 59.062 36.000 0.00 0.00 33.70 1.52
729 1060 6.429692 TGAGCGAAATCAGTTCTCCATAAAAA 59.570 34.615 0.00 0.00 33.70 1.94
730 1061 6.612306 AGCGAAATCAGTTCTCCATAAAAAC 58.388 36.000 0.00 0.00 33.70 2.43
731 1062 6.431234 AGCGAAATCAGTTCTCCATAAAAACT 59.569 34.615 0.00 0.00 33.70 2.66
743 1074 6.721208 TCTCCATAAAAACTGATTTTCTGGCT 59.279 34.615 17.26 0.00 46.83 4.75
744 1075 7.888021 TCTCCATAAAAACTGATTTTCTGGCTA 59.112 33.333 17.26 8.86 46.83 3.93
746 1077 8.865090 TCCATAAAAACTGATTTTCTGGCTAAA 58.135 29.630 17.26 3.84 46.83 1.85
747 1078 9.487790 CCATAAAAACTGATTTTCTGGCTAAAA 57.512 29.630 12.35 1.75 43.83 1.52
770 1101 6.710597 AAAACTCCCTAAAAACTGTCCTTC 57.289 37.500 0.00 0.00 0.00 3.46
771 1102 5.648330 AACTCCCTAAAAACTGTCCTTCT 57.352 39.130 0.00 0.00 0.00 2.85
772 1103 5.230323 ACTCCCTAAAAACTGTCCTTCTC 57.770 43.478 0.00 0.00 0.00 2.87
774 1105 2.742589 CCCTAAAAACTGTCCTTCTCGC 59.257 50.000 0.00 0.00 0.00 5.03
775 1106 2.742589 CCTAAAAACTGTCCTTCTCGCC 59.257 50.000 0.00 0.00 0.00 5.54
776 1107 2.640316 AAAAACTGTCCTTCTCGCCT 57.360 45.000 0.00 0.00 0.00 5.52
777 1108 1.884235 AAAACTGTCCTTCTCGCCTG 58.116 50.000 0.00 0.00 0.00 4.85
779 1110 1.270907 AACTGTCCTTCTCGCCTGAT 58.729 50.000 0.00 0.00 0.00 2.90
780 1111 1.270907 ACTGTCCTTCTCGCCTGATT 58.729 50.000 0.00 0.00 0.00 2.57
781 1112 1.625818 ACTGTCCTTCTCGCCTGATTT 59.374 47.619 0.00 0.00 0.00 2.17
784 1115 2.303022 TGTCCTTCTCGCCTGATTTTCT 59.697 45.455 0.00 0.00 0.00 2.52
785 1116 2.675348 GTCCTTCTCGCCTGATTTTCTG 59.325 50.000 0.00 0.00 0.00 3.02
786 1117 2.012673 CCTTCTCGCCTGATTTTCTGG 58.987 52.381 0.00 0.00 38.38 3.86
793 1124 2.503895 CCTGATTTTCTGGCTGGAGT 57.496 50.000 0.00 0.00 0.00 3.85
794 1125 2.089980 CCTGATTTTCTGGCTGGAGTG 58.910 52.381 0.00 0.00 0.00 3.51
795 1126 2.089980 CTGATTTTCTGGCTGGAGTGG 58.910 52.381 0.00 0.00 0.00 4.00
797 1128 2.087646 GATTTTCTGGCTGGAGTGGAC 58.912 52.381 0.00 0.00 0.00 4.02
799 1130 1.118965 TTTCTGGCTGGAGTGGACGA 61.119 55.000 0.00 0.00 0.00 4.20
800 1131 1.536073 TTCTGGCTGGAGTGGACGAG 61.536 60.000 0.00 0.00 0.00 4.18
801 1132 3.655810 CTGGCTGGAGTGGACGAGC 62.656 68.421 0.00 0.00 40.06 5.03
802 1133 3.386237 GGCTGGAGTGGACGAGCT 61.386 66.667 0.00 0.00 40.49 4.09
803 1134 2.125753 GCTGGAGTGGACGAGCTG 60.126 66.667 0.00 0.00 38.30 4.24
804 1135 2.640302 GCTGGAGTGGACGAGCTGA 61.640 63.158 0.00 0.00 38.30 4.26
805 1136 1.510383 CTGGAGTGGACGAGCTGAG 59.490 63.158 0.00 0.00 0.00 3.35
807 1138 2.347322 GGAGTGGACGAGCTGAGCT 61.347 63.158 6.69 6.69 43.88 4.09
808 1139 1.589113 GAGTGGACGAGCTGAGCTT 59.411 57.895 9.00 0.00 39.88 3.74
809 1140 0.811915 GAGTGGACGAGCTGAGCTTA 59.188 55.000 9.00 0.00 39.88 3.09
811 1142 0.458716 GTGGACGAGCTGAGCTTACC 60.459 60.000 9.00 12.94 39.88 2.85
812 1143 1.226717 GGACGAGCTGAGCTTACCG 60.227 63.158 9.00 10.66 39.88 4.02
813 1144 1.507174 GACGAGCTGAGCTTACCGT 59.493 57.895 17.74 17.74 39.88 4.83
814 1145 0.798771 GACGAGCTGAGCTTACCGTG 60.799 60.000 21.71 5.52 39.88 4.94
815 1146 1.517257 CGAGCTGAGCTTACCGTGG 60.517 63.158 9.00 0.00 39.88 4.94
816 1147 1.890894 GAGCTGAGCTTACCGTGGA 59.109 57.895 9.00 0.00 39.88 4.02
818 1149 1.448013 GCTGAGCTTACCGTGGACC 60.448 63.158 0.00 0.00 0.00 4.46
819 1150 1.153823 CTGAGCTTACCGTGGACCG 60.154 63.158 0.00 0.00 0.00 4.79
823 1154 0.611714 AGCTTACCGTGGACCGATTT 59.388 50.000 0.00 0.00 39.56 2.17
824 1155 1.002773 AGCTTACCGTGGACCGATTTT 59.997 47.619 0.00 0.00 39.56 1.82
825 1156 1.808343 GCTTACCGTGGACCGATTTTT 59.192 47.619 0.00 0.00 39.56 1.94
826 1157 2.159612 GCTTACCGTGGACCGATTTTTC 60.160 50.000 0.00 0.00 39.56 2.29
827 1158 2.097680 TACCGTGGACCGATTTTTCC 57.902 50.000 0.00 0.00 39.56 3.13
829 1160 0.322187 CCGTGGACCGATTTTTCCCT 60.322 55.000 0.00 0.00 39.56 4.20
830 1161 1.530323 CGTGGACCGATTTTTCCCTT 58.470 50.000 0.00 0.00 39.56 3.95
831 1162 1.199097 CGTGGACCGATTTTTCCCTTG 59.801 52.381 0.00 0.00 39.56 3.61
832 1163 1.544246 GTGGACCGATTTTTCCCTTGG 59.456 52.381 0.00 0.00 0.00 3.61
833 1164 0.530744 GGACCGATTTTTCCCTTGGC 59.469 55.000 0.00 0.00 0.00 4.52
834 1165 1.545841 GACCGATTTTTCCCTTGGCT 58.454 50.000 0.00 0.00 0.00 4.75
835 1166 2.619590 GGACCGATTTTTCCCTTGGCTA 60.620 50.000 0.00 0.00 0.00 3.93
836 1167 2.422479 GACCGATTTTTCCCTTGGCTAC 59.578 50.000 0.00 0.00 0.00 3.58
839 1170 3.366985 CCGATTTTTCCCTTGGCTACAAC 60.367 47.826 0.00 0.00 32.14 3.32
840 1171 3.669557 CGATTTTTCCCTTGGCTACAACG 60.670 47.826 0.00 0.00 32.14 4.10
841 1172 2.642154 TTTTCCCTTGGCTACAACGA 57.358 45.000 0.00 0.00 32.14 3.85
842 1173 2.178912 TTTCCCTTGGCTACAACGAG 57.821 50.000 0.00 0.00 32.14 4.18
844 1175 0.606604 TCCCTTGGCTACAACGAGTC 59.393 55.000 0.00 0.00 32.14 3.36
845 1176 0.320374 CCCTTGGCTACAACGAGTCA 59.680 55.000 0.00 0.00 32.14 3.41
846 1177 1.270625 CCCTTGGCTACAACGAGTCAA 60.271 52.381 0.00 0.00 38.70 3.18
847 1178 1.798813 CCTTGGCTACAACGAGTCAAC 59.201 52.381 0.00 0.00 36.14 3.18
849 1180 0.669619 TGGCTACAACGAGTCAACGA 59.330 50.000 0.00 0.00 37.03 3.85
851 1182 0.701303 GCTACAACGAGTCAACGACG 59.299 55.000 0.00 0.00 37.67 5.12
852 1183 1.923316 GCTACAACGAGTCAACGACGT 60.923 52.381 0.00 0.00 41.97 4.34
854 1185 1.198397 CAACGAGTCAACGACGTGC 59.802 57.895 0.00 0.00 40.10 5.34
855 1186 1.947642 AACGAGTCAACGACGTGCC 60.948 57.895 0.00 0.00 40.10 5.01
856 1187 2.354188 CGAGTCAACGACGTGCCA 60.354 61.111 0.00 0.00 37.67 4.92
857 1188 1.733041 CGAGTCAACGACGTGCCAT 60.733 57.895 0.00 0.00 37.67 4.40
859 1190 0.666274 GAGTCAACGACGTGCCATCA 60.666 55.000 0.00 0.00 37.67 3.07
861 1192 0.944311 GTCAACGACGTGCCATCAGT 60.944 55.000 0.00 0.00 0.00 3.41
862 1193 0.249699 TCAACGACGTGCCATCAGTT 60.250 50.000 0.00 0.00 0.00 3.16
863 1194 0.163788 CAACGACGTGCCATCAGTTC 59.836 55.000 0.00 0.00 0.00 3.01
864 1195 0.033504 AACGACGTGCCATCAGTTCT 59.966 50.000 0.00 0.00 0.00 3.01
865 1196 0.885879 ACGACGTGCCATCAGTTCTA 59.114 50.000 0.00 0.00 0.00 2.10
866 1197 1.271379 ACGACGTGCCATCAGTTCTAA 59.729 47.619 0.00 0.00 0.00 2.10
867 1198 2.288579 ACGACGTGCCATCAGTTCTAAA 60.289 45.455 0.00 0.00 0.00 1.85
868 1199 2.734606 CGACGTGCCATCAGTTCTAAAA 59.265 45.455 0.00 0.00 0.00 1.52
869 1200 3.370978 CGACGTGCCATCAGTTCTAAAAT 59.629 43.478 0.00 0.00 0.00 1.82
870 1201 4.142902 CGACGTGCCATCAGTTCTAAAATT 60.143 41.667 0.00 0.00 0.00 1.82
871 1202 5.296813 ACGTGCCATCAGTTCTAAAATTC 57.703 39.130 0.00 0.00 0.00 2.17
872 1203 4.156008 ACGTGCCATCAGTTCTAAAATTCC 59.844 41.667 0.00 0.00 0.00 3.01
873 1204 4.396166 CGTGCCATCAGTTCTAAAATTCCT 59.604 41.667 0.00 0.00 0.00 3.36
874 1205 5.644644 GTGCCATCAGTTCTAAAATTCCTG 58.355 41.667 0.00 0.00 0.00 3.86
875 1206 4.706476 TGCCATCAGTTCTAAAATTCCTGG 59.294 41.667 0.00 0.00 0.00 4.45
876 1207 4.098501 GCCATCAGTTCTAAAATTCCTGGG 59.901 45.833 0.00 0.00 0.00 4.45
877 1208 4.098501 CCATCAGTTCTAAAATTCCTGGGC 59.901 45.833 0.00 0.00 0.00 5.36
878 1209 4.657814 TCAGTTCTAAAATTCCTGGGCT 57.342 40.909 0.00 0.00 0.00 5.19
879 1210 4.335416 TCAGTTCTAAAATTCCTGGGCTG 58.665 43.478 0.00 0.00 0.00 4.85
880 1211 4.042809 TCAGTTCTAAAATTCCTGGGCTGA 59.957 41.667 0.00 0.00 0.00 4.26
881 1212 4.156739 CAGTTCTAAAATTCCTGGGCTGAC 59.843 45.833 0.00 0.00 0.00 3.51
882 1213 3.366052 TCTAAAATTCCTGGGCTGACC 57.634 47.619 0.00 0.00 40.81 4.02
883 1214 2.017049 CTAAAATTCCTGGGCTGACCG 58.983 52.381 0.00 0.00 44.64 4.79
884 1215 0.611896 AAAATTCCTGGGCTGACCGG 60.612 55.000 0.00 0.00 44.64 5.28
885 1216 1.789576 AAATTCCTGGGCTGACCGGT 61.790 55.000 6.92 6.92 44.78 5.28
886 1217 2.484287 AATTCCTGGGCTGACCGGTG 62.484 60.000 14.63 0.00 44.78 4.94
887 1218 4.631740 TCCTGGGCTGACCGGTGA 62.632 66.667 14.63 0.65 44.78 4.02
888 1219 4.394712 CCTGGGCTGACCGGTGAC 62.395 72.222 14.63 0.00 44.78 3.67
889 1220 3.314331 CTGGGCTGACCGGTGACT 61.314 66.667 14.63 0.00 44.64 3.41
890 1221 3.596066 CTGGGCTGACCGGTGACTG 62.596 68.421 14.63 3.39 44.64 3.51
891 1222 3.626924 GGGCTGACCGGTGACTGT 61.627 66.667 14.63 0.00 36.48 3.55
892 1223 2.357517 GGCTGACCGGTGACTGTG 60.358 66.667 14.63 0.00 0.00 3.66
893 1224 2.734591 GCTGACCGGTGACTGTGA 59.265 61.111 14.63 0.00 0.00 3.58
894 1225 1.373497 GCTGACCGGTGACTGTGAG 60.373 63.158 14.63 0.00 32.20 3.51
895 1226 1.373497 CTGACCGGTGACTGTGAGC 60.373 63.158 14.63 0.00 0.00 4.26
896 1227 2.087462 CTGACCGGTGACTGTGAGCA 62.087 60.000 14.63 0.00 0.00 4.26
897 1228 1.664965 GACCGGTGACTGTGAGCAC 60.665 63.158 14.63 0.00 0.00 4.40
898 1229 2.363711 GACCGGTGACTGTGAGCACA 62.364 60.000 14.63 3.02 39.32 4.57
899 1230 1.956170 CCGGTGACTGTGAGCACAC 60.956 63.158 7.39 7.39 46.09 3.82
907 1238 2.203195 GTGAGCACACACCAGCCA 60.203 61.111 9.58 0.00 45.32 4.75
908 1239 1.601759 GTGAGCACACACCAGCCAT 60.602 57.895 9.58 0.00 45.32 4.40
909 1240 1.151221 TGAGCACACACCAGCCATT 59.849 52.632 0.00 0.00 0.00 3.16
910 1241 1.174078 TGAGCACACACCAGCCATTG 61.174 55.000 0.00 0.00 0.00 2.82
911 1242 2.048877 GCACACACCAGCCATTGC 60.049 61.111 0.00 0.00 37.95 3.56
912 1243 2.652530 CACACACCAGCCATTGCC 59.347 61.111 0.00 0.00 38.69 4.52
913 1244 1.904865 CACACACCAGCCATTGCCT 60.905 57.895 0.00 0.00 38.69 4.75
914 1245 1.604593 ACACACCAGCCATTGCCTC 60.605 57.895 0.00 0.00 38.69 4.70
915 1246 2.036256 ACACCAGCCATTGCCTCC 59.964 61.111 0.00 0.00 38.69 4.30
916 1247 2.757099 CACCAGCCATTGCCTCCC 60.757 66.667 0.00 0.00 38.69 4.30
917 1248 4.066139 ACCAGCCATTGCCTCCCC 62.066 66.667 0.00 0.00 38.69 4.81
918 1249 4.064768 CCAGCCATTGCCTCCCCA 62.065 66.667 0.00 0.00 38.69 4.96
919 1250 2.757099 CAGCCATTGCCTCCCCAC 60.757 66.667 0.00 0.00 38.69 4.61
920 1251 4.066139 AGCCATTGCCTCCCCACC 62.066 66.667 0.00 0.00 38.69 4.61
921 1252 4.066139 GCCATTGCCTCCCCACCT 62.066 66.667 0.00 0.00 0.00 4.00
922 1253 2.276740 CCATTGCCTCCCCACCTC 59.723 66.667 0.00 0.00 0.00 3.85
923 1254 2.276740 CATTGCCTCCCCACCTCC 59.723 66.667 0.00 0.00 0.00 4.30
924 1255 2.204291 ATTGCCTCCCCACCTCCA 60.204 61.111 0.00 0.00 0.00 3.86
925 1256 2.616458 ATTGCCTCCCCACCTCCAC 61.616 63.158 0.00 0.00 0.00 4.02
926 1257 4.590553 TGCCTCCCCACCTCCACA 62.591 66.667 0.00 0.00 0.00 4.17
927 1258 3.017581 GCCTCCCCACCTCCACAT 61.018 66.667 0.00 0.00 0.00 3.21
928 1259 1.692749 GCCTCCCCACCTCCACATA 60.693 63.158 0.00 0.00 0.00 2.29
929 1260 1.984288 GCCTCCCCACCTCCACATAC 61.984 65.000 0.00 0.00 0.00 2.39
930 1261 1.345715 CCTCCCCACCTCCACATACC 61.346 65.000 0.00 0.00 0.00 2.73
931 1262 0.620410 CTCCCCACCTCCACATACCA 60.620 60.000 0.00 0.00 0.00 3.25
932 1263 0.912487 TCCCCACCTCCACATACCAC 60.912 60.000 0.00 0.00 0.00 4.16
933 1264 0.914417 CCCCACCTCCACATACCACT 60.914 60.000 0.00 0.00 0.00 4.00
934 1265 0.253044 CCCACCTCCACATACCACTG 59.747 60.000 0.00 0.00 0.00 3.66
935 1266 0.392998 CCACCTCCACATACCACTGC 60.393 60.000 0.00 0.00 0.00 4.40
936 1267 0.740868 CACCTCCACATACCACTGCG 60.741 60.000 0.00 0.00 0.00 5.18
937 1268 1.192146 ACCTCCACATACCACTGCGT 61.192 55.000 0.00 0.00 0.00 5.24
938 1269 0.036388 CCTCCACATACCACTGCGTT 60.036 55.000 0.00 0.00 0.00 4.84
939 1270 1.206132 CCTCCACATACCACTGCGTTA 59.794 52.381 0.00 0.00 0.00 3.18
940 1271 2.354303 CCTCCACATACCACTGCGTTAA 60.354 50.000 0.00 0.00 0.00 2.01
941 1272 3.531538 CTCCACATACCACTGCGTTAAT 58.468 45.455 0.00 0.00 0.00 1.40
942 1273 3.527533 TCCACATACCACTGCGTTAATC 58.472 45.455 0.00 0.00 0.00 1.75
943 1274 2.612212 CCACATACCACTGCGTTAATCC 59.388 50.000 0.00 0.00 0.00 3.01
944 1275 3.531538 CACATACCACTGCGTTAATCCT 58.468 45.455 0.00 0.00 0.00 3.24
945 1276 3.555956 CACATACCACTGCGTTAATCCTC 59.444 47.826 0.00 0.00 0.00 3.71
946 1277 3.196901 ACATACCACTGCGTTAATCCTCA 59.803 43.478 0.00 0.00 0.00 3.86
947 1278 2.851263 ACCACTGCGTTAATCCTCAA 57.149 45.000 0.00 0.00 0.00 3.02
948 1279 3.350219 ACCACTGCGTTAATCCTCAAT 57.650 42.857 0.00 0.00 0.00 2.57
949 1280 3.270877 ACCACTGCGTTAATCCTCAATC 58.729 45.455 0.00 0.00 0.00 2.67
950 1281 2.614057 CCACTGCGTTAATCCTCAATCC 59.386 50.000 0.00 0.00 0.00 3.01
951 1282 3.535561 CACTGCGTTAATCCTCAATCCT 58.464 45.455 0.00 0.00 0.00 3.24
952 1283 3.941483 CACTGCGTTAATCCTCAATCCTT 59.059 43.478 0.00 0.00 0.00 3.36
953 1284 4.396166 CACTGCGTTAATCCTCAATCCTTT 59.604 41.667 0.00 0.00 0.00 3.11
954 1285 4.636206 ACTGCGTTAATCCTCAATCCTTTC 59.364 41.667 0.00 0.00 0.00 2.62
955 1286 3.945285 TGCGTTAATCCTCAATCCTTTCC 59.055 43.478 0.00 0.00 0.00 3.13
956 1287 3.945285 GCGTTAATCCTCAATCCTTTCCA 59.055 43.478 0.00 0.00 0.00 3.53
957 1288 4.201920 GCGTTAATCCTCAATCCTTTCCAC 60.202 45.833 0.00 0.00 0.00 4.02
958 1289 4.335594 CGTTAATCCTCAATCCTTTCCACC 59.664 45.833 0.00 0.00 0.00 4.61
959 1290 3.388552 AATCCTCAATCCTTTCCACCC 57.611 47.619 0.00 0.00 0.00 4.61
960 1291 0.618458 TCCTCAATCCTTTCCACCCG 59.382 55.000 0.00 0.00 0.00 5.28
961 1292 1.032114 CCTCAATCCTTTCCACCCGC 61.032 60.000 0.00 0.00 0.00 6.13
962 1293 1.369091 CTCAATCCTTTCCACCCGCG 61.369 60.000 0.00 0.00 0.00 6.46
963 1294 2.750237 AATCCTTTCCACCCGCGC 60.750 61.111 0.00 0.00 0.00 6.86
964 1295 4.796495 ATCCTTTCCACCCGCGCC 62.796 66.667 0.00 0.00 0.00 6.53
967 1298 3.431725 CTTTCCACCCGCGCCTTC 61.432 66.667 0.00 0.00 0.00 3.46
968 1299 4.257654 TTTCCACCCGCGCCTTCA 62.258 61.111 0.00 0.00 0.00 3.02
988 1319 1.115326 ACCTTCAAAGCACCTTGCCC 61.115 55.000 0.00 0.00 46.52 5.36
989 1320 1.667722 CTTCAAAGCACCTTGCCCC 59.332 57.895 0.00 0.00 46.52 5.80
994 1325 0.915364 AAAGCACCTTGCCCCAAAAA 59.085 45.000 0.00 0.00 46.52 1.94
1012 1343 0.906775 AAAATCCATGGCTGCCAAGG 59.093 50.000 31.77 31.77 43.08 3.61
1016 1347 2.345760 CCATGGCTGCCAAGGTCAC 61.346 63.158 29.88 0.00 37.58 3.67
1017 1348 2.036256 ATGGCTGCCAAGGTCACC 59.964 61.111 27.24 0.00 36.95 4.02
1018 1349 2.541907 ATGGCTGCCAAGGTCACCT 61.542 57.895 27.24 2.94 36.95 4.00
1019 1350 2.360475 GGCTGCCAAGGTCACCTC 60.360 66.667 15.17 0.00 30.89 3.85
1020 1351 2.431683 GCTGCCAAGGTCACCTCA 59.568 61.111 0.00 0.00 30.89 3.86
1021 1352 1.001641 GCTGCCAAGGTCACCTCAT 60.002 57.895 0.00 0.00 30.89 2.90
1033 1364 2.681848 GTCACCTCATCCTCATGCTTTG 59.318 50.000 0.00 0.00 0.00 2.77
1059 1390 2.208431 CTAAAGGAAGCGCTGATCCTG 58.792 52.381 27.26 13.88 45.33 3.86
1108 1439 1.376466 GTGCTCCTCCTCTTTGCCA 59.624 57.895 0.00 0.00 0.00 4.92
1126 1457 0.036010 CATCACCGCCTTCCTTGACT 60.036 55.000 0.00 0.00 0.00 3.41
1133 1464 0.693049 GCCTTCCTTGACTCCTTGGA 59.307 55.000 0.00 0.00 0.00 3.53
1160 1491 1.901948 TGTTCGTCCAGCCTCTCGT 60.902 57.895 0.00 0.00 0.00 4.18
1172 1503 1.062685 CTCTCGTCGACGACATGGG 59.937 63.158 34.97 24.50 44.22 4.00
1184 1515 2.191375 CATGGGCAGCCGTCTCAT 59.809 61.111 5.00 0.00 0.00 2.90
1208 1539 2.113139 CAACAGCACCGACCCCTT 59.887 61.111 0.00 0.00 0.00 3.95
1210 1541 3.491598 AACAGCACCGACCCCTTGG 62.492 63.158 0.00 0.00 37.80 3.61
1222 1553 4.077184 CCTTGGGCGCCGAGTACA 62.077 66.667 22.54 9.62 33.27 2.90
1243 1592 0.108898 CAAGCTCACGGAGGAGACAG 60.109 60.000 5.35 0.00 37.05 3.51
1247 1599 1.662438 CTCACGGAGGAGACAGAGCC 61.662 65.000 0.00 0.00 37.05 4.70
1250 1602 2.422231 CGGAGGAGACAGAGCCAGG 61.422 68.421 0.00 0.00 0.00 4.45
1256 1608 2.010582 GAGACAGAGCCAGGCGGTAG 62.011 65.000 5.55 0.00 33.28 3.18
1257 1609 3.724914 GACAGAGCCAGGCGGTAGC 62.725 68.421 5.55 0.00 44.18 3.58
1258 1610 4.880537 CAGAGCCAGGCGGTAGCG 62.881 72.222 10.57 10.57 46.35 4.26
1282 7313 1.280133 CAAAGCTCCTCCTCATCACCA 59.720 52.381 0.00 0.00 0.00 4.17
1285 7316 0.033228 GCTCCTCCTCATCACCATCG 59.967 60.000 0.00 0.00 0.00 3.84
1288 7319 1.070445 CTCCTCATCACCATCGCCC 59.930 63.158 0.00 0.00 0.00 6.13
1291 7322 1.890979 CTCATCACCATCGCCCAGC 60.891 63.158 0.00 0.00 0.00 4.85
1294 7325 3.411114 ATCACCATCGCCCAGCTGG 62.411 63.158 26.87 26.87 36.09 4.85
1303 7334 4.742201 CCCAGCTGGTCGTCGGTG 62.742 72.222 30.63 9.48 0.00 4.94
1304 7335 4.742201 CCAGCTGGTCGTCGGTGG 62.742 72.222 25.53 0.00 41.71 4.61
1305 7336 3.991051 CAGCTGGTCGTCGGTGGT 61.991 66.667 5.57 0.00 0.00 4.16
1347 7378 2.759973 ATCCTCGCCCTCTTCGCA 60.760 61.111 0.00 0.00 0.00 5.10
1423 7454 1.144936 GTCAAGGGGAGGATCAGCG 59.855 63.158 0.00 0.00 36.25 5.18
1639 7676 3.680786 CGGTCGACAGGAGGTGCA 61.681 66.667 18.91 0.00 0.00 4.57
1717 7754 2.340078 GACTCGTGCTGGTGCTCA 59.660 61.111 0.00 0.00 40.48 4.26
1820 7857 2.764314 GCTTGCTGGCGGTGTATGG 61.764 63.158 0.00 0.00 0.00 2.74
1821 7858 2.749839 TTGCTGGCGGTGTATGGC 60.750 61.111 0.00 0.00 0.00 4.40
1861 7898 2.994995 TCTTCTCCTTGGCGGCGA 60.995 61.111 12.98 0.14 0.00 5.54
1917 7954 0.745845 AGGTGATCGATGCCTTGTGC 60.746 55.000 0.54 0.00 41.77 4.57
1960 7997 7.925703 GTGTAACACACGTATAATCATAGCT 57.074 36.000 0.00 0.00 39.53 3.32
1976 8013 8.916628 AATCATAGCTAAGAATTTCCTCCTTC 57.083 34.615 2.28 0.00 0.00 3.46
1986 8023 6.472887 AGAATTTCCTCCTTCGTCACAATTA 58.527 36.000 0.00 0.00 0.00 1.40
1988 8025 3.887621 TCCTCCTTCGTCACAATTAGG 57.112 47.619 0.00 0.00 0.00 2.69
1995 8032 5.046591 TCCTTCGTCACAATTAGGAGACAAT 60.047 40.000 0.00 0.00 31.60 2.71
2110 8154 7.700846 AGAGGCATAGGCTATTTAGTCTAGTA 58.299 38.462 3.76 0.00 43.06 1.82
2111 8155 8.340757 AGAGGCATAGGCTATTTAGTCTAGTAT 58.659 37.037 3.76 0.00 43.06 2.12
2218 8294 9.150348 ACTTGGAACAAAATTGTAAAGTTTCTG 57.850 29.630 12.48 0.00 40.44 3.02
2250 8326 5.283457 ACTCAGAAAGGCCATATACTGTC 57.717 43.478 5.01 0.00 0.00 3.51
2258 8334 1.945819 GCCATATACTGTCGCATGGGG 60.946 57.143 10.21 0.00 38.70 4.96
2402 8480 7.033530 TCCGATTTAAGAACAAACACATGTT 57.966 32.000 0.00 0.00 45.82 2.71
2430 8508 3.313249 TGCATGAGAATAACGCCAGATTG 59.687 43.478 0.00 0.00 0.00 2.67
2446 8524 6.808212 CGCCAGATTGACAAATAAACTTCAAT 59.192 34.615 0.00 0.00 40.57 2.57
2533 8611 1.515521 GGGGCCACGAAACAACTCAG 61.516 60.000 4.39 0.00 0.00 3.35
2559 8637 7.431376 GCAATCTAACTGATCACAATGTCATTG 59.569 37.037 21.55 21.55 39.18 2.82
2572 8650 9.194271 TCACAATGTCATTGAATTTTACACATG 57.806 29.630 28.28 13.36 42.83 3.21
2624 8702 3.895232 TGCCTTCATCTTGGTAGAGTC 57.105 47.619 0.00 0.00 32.92 3.36
2681 8759 4.277423 ACCTTAATACAGGTGTTGTTGTGC 59.723 41.667 0.00 0.00 46.22 4.57
2768 8848 4.037446 GCACACTTATGAAAAGTTGGACCA 59.963 41.667 0.00 0.00 0.00 4.02
2836 8916 5.401531 AAGAATCAGACACGCCTACTTAA 57.598 39.130 0.00 0.00 0.00 1.85
2901 8983 5.953548 TGAATCCAGTGAATCCACAATGAAT 59.046 36.000 0.00 0.00 45.54 2.57
2906 8988 6.071784 TCCAGTGAATCCACAATGAATCTTTG 60.072 38.462 7.25 7.25 45.54 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.697250 CGAATACTATTTGTAATTCTTTTGCGA 57.303 29.630 0.00 0.00 34.45 5.10
3 4 9.697250 TCGAATACTATTTGTAATTCTTTTGCG 57.303 29.630 0.00 0.00 34.45 4.85
65 66 9.825972 TGCATTTTAAAATTTTCGTGTTTTCAA 57.174 22.222 10.77 0.00 0.00 2.69
66 67 9.825972 TTGCATTTTAAAATTTTCGTGTTTTCA 57.174 22.222 10.77 0.00 0.00 2.69
69 70 9.994432 TGATTGCATTTTAAAATTTTCGTGTTT 57.006 22.222 10.77 0.00 0.00 2.83
104 105 9.210329 ACCTTTTCGAAACAATGTTAAACTTTT 57.790 25.926 10.79 0.00 0.00 2.27
105 106 8.652463 CACCTTTTCGAAACAATGTTAAACTTT 58.348 29.630 10.79 0.00 0.00 2.66
106 107 8.030106 TCACCTTTTCGAAACAATGTTAAACTT 58.970 29.630 10.79 0.00 0.00 2.66
108 109 7.514591 GCTCACCTTTTCGAAACAATGTTAAAC 60.515 37.037 10.79 0.00 0.00 2.01
109 110 6.474102 GCTCACCTTTTCGAAACAATGTTAAA 59.526 34.615 10.79 0.00 0.00 1.52
110 111 5.974751 GCTCACCTTTTCGAAACAATGTTAA 59.025 36.000 10.79 0.00 0.00 2.01
111 112 5.066634 TGCTCACCTTTTCGAAACAATGTTA 59.933 36.000 10.79 0.00 0.00 2.41
112 113 4.142271 TGCTCACCTTTTCGAAACAATGTT 60.142 37.500 10.79 0.00 0.00 2.71
113 114 3.380004 TGCTCACCTTTTCGAAACAATGT 59.620 39.130 10.79 2.66 0.00 2.71
114 115 3.963665 TGCTCACCTTTTCGAAACAATG 58.036 40.909 10.79 8.90 0.00 2.82
116 117 4.647424 AATGCTCACCTTTTCGAAACAA 57.353 36.364 10.79 0.00 0.00 2.83
117 118 4.647424 AAATGCTCACCTTTTCGAAACA 57.353 36.364 10.79 3.77 0.00 2.83
142 143 9.434420 TCCCTTTTTAAAAATGTATGCAATCTG 57.566 29.630 13.55 0.00 0.00 2.90
143 144 9.657419 CTCCCTTTTTAAAAATGTATGCAATCT 57.343 29.630 13.55 0.00 0.00 2.40
145 146 7.882271 TGCTCCCTTTTTAAAAATGTATGCAAT 59.118 29.630 13.55 0.00 0.00 3.56
146 147 7.220030 TGCTCCCTTTTTAAAAATGTATGCAA 58.780 30.769 13.55 4.70 0.00 4.08
147 148 6.763355 TGCTCCCTTTTTAAAAATGTATGCA 58.237 32.000 13.55 15.60 0.00 3.96
148 149 7.848223 ATGCTCCCTTTTTAAAAATGTATGC 57.152 32.000 13.55 13.67 0.00 3.14
197 198 9.495754 TGTGTTTTCAAAAACTTTCAACTTTTG 57.504 25.926 16.77 0.00 46.37 2.44
218 219 5.005586 CGCACATCTGAAACAATTTTGTGTT 59.994 36.000 0.00 0.00 43.58 3.32
219 220 4.503734 CGCACATCTGAAACAATTTTGTGT 59.496 37.500 0.00 0.00 41.31 3.72
220 221 4.739228 TCGCACATCTGAAACAATTTTGTG 59.261 37.500 0.00 0.00 41.31 3.33
221 222 4.930963 TCGCACATCTGAAACAATTTTGT 58.069 34.783 0.00 0.00 44.72 2.83
222 223 5.107760 CCTTCGCACATCTGAAACAATTTTG 60.108 40.000 0.00 0.00 0.00 2.44
223 224 4.984161 CCTTCGCACATCTGAAACAATTTT 59.016 37.500 0.00 0.00 0.00 1.82
226 227 2.489329 CCCTTCGCACATCTGAAACAAT 59.511 45.455 0.00 0.00 0.00 2.71
227 228 1.879380 CCCTTCGCACATCTGAAACAA 59.121 47.619 0.00 0.00 0.00 2.83
230 231 2.559698 TTCCCTTCGCACATCTGAAA 57.440 45.000 0.00 0.00 0.00 2.69
231 232 2.787473 ATTCCCTTCGCACATCTGAA 57.213 45.000 0.00 0.00 0.00 3.02
232 233 4.422073 AATATTCCCTTCGCACATCTGA 57.578 40.909 0.00 0.00 0.00 3.27
233 234 5.505173 AAAATATTCCCTTCGCACATCTG 57.495 39.130 0.00 0.00 0.00 2.90
235 236 5.890334 TGAAAAATATTCCCTTCGCACATC 58.110 37.500 0.00 0.00 0.00 3.06
236 237 5.913137 TGAAAAATATTCCCTTCGCACAT 57.087 34.783 0.00 0.00 0.00 3.21
237 238 5.713792 TTGAAAAATATTCCCTTCGCACA 57.286 34.783 0.00 0.00 0.00 4.57
238 239 7.595311 AATTTGAAAAATATTCCCTTCGCAC 57.405 32.000 0.00 0.00 0.00 5.34
239 240 7.659390 ACAAATTTGAAAAATATTCCCTTCGCA 59.341 29.630 24.64 0.00 0.00 5.10
240 241 7.956943 CACAAATTTGAAAAATATTCCCTTCGC 59.043 33.333 24.64 0.00 0.00 4.70
241 242 9.202273 TCACAAATTTGAAAAATATTCCCTTCG 57.798 29.630 24.64 0.00 0.00 3.79
276 277 9.691362 GCATTCTAATTCCTTTACAAGTTTTCA 57.309 29.630 0.00 0.00 0.00 2.69
277 278 9.691362 TGCATTCTAATTCCTTTACAAGTTTTC 57.309 29.630 0.00 0.00 0.00 2.29
280 281 9.476202 GTTTGCATTCTAATTCCTTTACAAGTT 57.524 29.630 0.00 0.00 0.00 2.66
281 282 8.860088 AGTTTGCATTCTAATTCCTTTACAAGT 58.140 29.630 0.00 0.00 0.00 3.16
309 310 9.726438 TTCCAAAATTTGTTAGGAAACTCAAAA 57.274 25.926 4.92 0.00 43.67 2.44
310 311 9.157104 GTTCCAAAATTTGTTAGGAAACTCAAA 57.843 29.630 13.14 0.00 43.67 2.69
312 313 7.841956 TGTTCCAAAATTTGTTAGGAAACTCA 58.158 30.769 13.14 7.46 43.67 3.41
313 314 8.710835 TTGTTCCAAAATTTGTTAGGAAACTC 57.289 30.769 13.14 5.69 43.67 3.01
315 316 7.766738 TCCTTGTTCCAAAATTTGTTAGGAAAC 59.233 33.333 13.14 9.74 39.81 2.78
316 317 7.852263 TCCTTGTTCCAAAATTTGTTAGGAAA 58.148 30.769 13.14 2.99 39.81 3.13
317 318 7.425224 TCCTTGTTCCAAAATTTGTTAGGAA 57.575 32.000 4.92 9.36 36.10 3.36
318 319 7.125053 AGTTCCTTGTTCCAAAATTTGTTAGGA 59.875 33.333 4.92 6.28 0.00 2.94
319 320 7.272244 AGTTCCTTGTTCCAAAATTTGTTAGG 58.728 34.615 4.92 4.27 0.00 2.69
320 321 8.716646 AAGTTCCTTGTTCCAAAATTTGTTAG 57.283 30.769 4.92 0.00 0.00 2.34
321 322 9.508642 AAAAGTTCCTTGTTCCAAAATTTGTTA 57.491 25.926 4.92 0.00 0.00 2.41
322 323 7.994425 AAAGTTCCTTGTTCCAAAATTTGTT 57.006 28.000 4.92 0.00 0.00 2.83
323 324 7.994425 AAAAGTTCCTTGTTCCAAAATTTGT 57.006 28.000 4.92 0.00 0.00 2.83
350 351 9.713740 CAAATTCAAAAATGTTTCGGAATTTCA 57.286 25.926 12.95 0.00 38.86 2.69
351 352 9.715123 ACAAATTCAAAAATGTTTCGGAATTTC 57.285 25.926 12.95 0.00 38.86 2.17
352 353 9.715123 GACAAATTCAAAAATGTTTCGGAATTT 57.285 25.926 11.14 11.14 40.03 1.82
353 354 8.887717 TGACAAATTCAAAAATGTTTCGGAATT 58.112 25.926 2.32 2.32 35.85 2.17
354 355 8.430801 TGACAAATTCAAAAATGTTTCGGAAT 57.569 26.923 0.00 0.00 0.00 3.01
355 356 7.834068 TGACAAATTCAAAAATGTTTCGGAA 57.166 28.000 0.00 0.00 0.00 4.30
356 357 7.834068 TTGACAAATTCAAAAATGTTTCGGA 57.166 28.000 0.00 0.00 41.51 4.55
408 409 9.859152 TGGGATTTTCCAAAAAGTTCATATTTT 57.141 25.926 0.00 0.00 38.64 1.82
412 413 9.859152 AAAATGGGATTTTCCAAAAAGTTCATA 57.141 25.926 0.00 0.00 37.96 2.15
413 414 8.765488 AAAATGGGATTTTCCAAAAAGTTCAT 57.235 26.923 0.00 0.00 37.96 2.57
414 415 8.586879 AAAAATGGGATTTTCCAAAAAGTTCA 57.413 26.923 0.00 0.00 41.30 3.18
546 877 4.399934 ACAAGTTCAGGTCCGCTTTAAAAA 59.600 37.500 0.00 0.00 0.00 1.94
547 878 3.949113 ACAAGTTCAGGTCCGCTTTAAAA 59.051 39.130 0.00 0.00 0.00 1.52
548 879 3.547746 ACAAGTTCAGGTCCGCTTTAAA 58.452 40.909 0.00 0.00 0.00 1.52
549 880 3.135994 GACAAGTTCAGGTCCGCTTTAA 58.864 45.455 0.00 0.00 0.00 1.52
550 881 2.103432 TGACAAGTTCAGGTCCGCTTTA 59.897 45.455 0.00 0.00 33.09 1.85
552 883 0.468226 TGACAAGTTCAGGTCCGCTT 59.532 50.000 0.00 0.00 33.09 4.68
553 884 2.133195 TGACAAGTTCAGGTCCGCT 58.867 52.632 0.00 0.00 33.09 5.52
554 885 4.771127 TGACAAGTTCAGGTCCGC 57.229 55.556 0.00 0.00 33.09 5.54
561 892 4.165372 AGGTTAAAGGTCCTGACAAGTTCA 59.835 41.667 0.00 0.00 32.29 3.18
562 893 4.715713 AGGTTAAAGGTCCTGACAAGTTC 58.284 43.478 0.00 0.00 32.29 3.01
565 896 4.974399 AGAAGGTTAAAGGTCCTGACAAG 58.026 43.478 0.00 0.00 33.97 3.16
566 897 5.842328 TCTAGAAGGTTAAAGGTCCTGACAA 59.158 40.000 0.00 0.00 33.97 3.18
567 898 5.399991 TCTAGAAGGTTAAAGGTCCTGACA 58.600 41.667 0.00 0.00 33.97 3.58
568 899 5.997384 TCTAGAAGGTTAAAGGTCCTGAC 57.003 43.478 0.00 0.00 33.97 3.51
569 900 6.607004 CTTCTAGAAGGTTAAAGGTCCTGA 57.393 41.667 22.67 0.00 34.87 3.86
585 916 2.848694 TCCGGTTCTAGGACCTTCTAGA 59.151 50.000 18.47 4.40 42.63 2.43
587 918 2.686118 GCTCCGGTTCTAGGACCTTCTA 60.686 54.545 18.47 0.01 37.56 2.10
588 919 1.960953 GCTCCGGTTCTAGGACCTTCT 60.961 57.143 18.47 0.00 37.56 2.85
589 920 0.460722 GCTCCGGTTCTAGGACCTTC 59.539 60.000 18.47 0.80 37.56 3.46
590 921 0.976590 GGCTCCGGTTCTAGGACCTT 60.977 60.000 18.47 0.00 37.56 3.50
591 922 1.381463 GGCTCCGGTTCTAGGACCT 60.381 63.158 18.47 0.00 37.56 3.85
592 923 1.677637 CTGGCTCCGGTTCTAGGACC 61.678 65.000 10.58 10.58 36.31 4.46
593 924 1.817209 CTGGCTCCGGTTCTAGGAC 59.183 63.158 0.00 0.00 33.58 3.85
594 925 2.058595 GCTGGCTCCGGTTCTAGGA 61.059 63.158 0.00 0.00 36.20 2.94
596 927 1.439644 GAGCTGGCTCCGGTTCTAG 59.560 63.158 11.14 2.90 37.11 2.43
597 928 3.617368 GAGCTGGCTCCGGTTCTA 58.383 61.111 11.14 0.00 37.11 2.10
605 936 1.844687 AGGAAAATTGGAGCTGGCTC 58.155 50.000 13.56 13.56 42.04 4.70
606 937 2.947695 GCTAGGAAAATTGGAGCTGGCT 60.948 50.000 0.00 0.00 0.00 4.75
609 940 4.789012 TTTGCTAGGAAAATTGGAGCTG 57.211 40.909 6.99 0.00 34.19 4.24
611 942 4.436332 CCATTTGCTAGGAAAATTGGAGC 58.564 43.478 19.38 0.00 0.00 4.70
612 943 4.681512 GCCCATTTGCTAGGAAAATTGGAG 60.682 45.833 23.61 16.59 33.62 3.86
613 944 3.197549 GCCCATTTGCTAGGAAAATTGGA 59.802 43.478 23.61 0.00 33.62 3.53
614 945 3.198417 AGCCCATTTGCTAGGAAAATTGG 59.802 43.478 17.89 17.89 40.56 3.16
615 946 4.186159 CAGCCCATTTGCTAGGAAAATTG 58.814 43.478 13.75 8.27 40.32 2.32
616 947 3.198417 CCAGCCCATTTGCTAGGAAAATT 59.802 43.478 13.75 0.00 40.32 1.82
617 948 2.767960 CCAGCCCATTTGCTAGGAAAAT 59.232 45.455 13.75 0.14 40.32 1.82
618 949 2.178580 CCAGCCCATTTGCTAGGAAAA 58.821 47.619 13.75 0.00 40.32 2.29
621 952 1.076777 GCCAGCCCATTTGCTAGGA 60.077 57.895 0.00 0.00 40.32 2.94
622 953 2.129785 GGCCAGCCCATTTGCTAGG 61.130 63.158 0.00 0.00 40.32 3.02
623 954 3.530067 GGCCAGCCCATTTGCTAG 58.470 61.111 0.00 0.00 40.32 3.42
633 964 4.864334 CATCGACCAGGGCCAGCC 62.864 72.222 6.18 0.00 0.00 4.85
635 966 2.187946 GTCATCGACCAGGGCCAG 59.812 66.667 6.18 0.00 0.00 4.85
636 967 2.606213 TGTCATCGACCAGGGCCA 60.606 61.111 6.18 0.00 0.00 5.36
637 968 2.125106 GTGTCATCGACCAGGGCC 60.125 66.667 0.00 0.00 0.00 5.80
638 969 1.448540 CTGTGTCATCGACCAGGGC 60.449 63.158 0.00 0.00 31.82 5.19
639 970 0.608130 TTCTGTGTCATCGACCAGGG 59.392 55.000 10.63 0.00 34.24 4.45
640 971 2.069273 GTTTCTGTGTCATCGACCAGG 58.931 52.381 10.63 0.00 34.24 4.45
641 972 1.721389 CGTTTCTGTGTCATCGACCAG 59.279 52.381 0.00 6.38 34.53 4.00
644 975 0.438830 GGCGTTTCTGTGTCATCGAC 59.561 55.000 0.00 0.00 0.00 4.20
646 977 0.948623 TGGGCGTTTCTGTGTCATCG 60.949 55.000 0.00 0.00 0.00 3.84
647 978 1.234821 TTGGGCGTTTCTGTGTCATC 58.765 50.000 0.00 0.00 0.00 2.92
648 979 1.909700 ATTGGGCGTTTCTGTGTCAT 58.090 45.000 0.00 0.00 0.00 3.06
649 980 1.606668 GAATTGGGCGTTTCTGTGTCA 59.393 47.619 0.00 0.00 0.00 3.58
650 981 1.068541 GGAATTGGGCGTTTCTGTGTC 60.069 52.381 0.00 0.00 0.00 3.67
651 982 0.958822 GGAATTGGGCGTTTCTGTGT 59.041 50.000 0.00 0.00 0.00 3.72
653 984 1.241315 CGGGAATTGGGCGTTTCTGT 61.241 55.000 0.00 0.00 0.00 3.41
654 985 1.506262 CGGGAATTGGGCGTTTCTG 59.494 57.895 0.00 0.00 0.00 3.02
656 987 1.035385 ATCCGGGAATTGGGCGTTTC 61.035 55.000 0.00 0.00 0.00 2.78
657 988 0.613572 AATCCGGGAATTGGGCGTTT 60.614 50.000 0.00 0.00 0.00 3.60
658 989 1.000145 AATCCGGGAATTGGGCGTT 60.000 52.632 0.00 0.00 0.00 4.84
659 990 1.453197 GAATCCGGGAATTGGGCGT 60.453 57.895 0.00 0.00 0.00 5.68
660 991 2.542907 CGAATCCGGGAATTGGGCG 61.543 63.158 0.00 0.00 0.00 6.13
662 993 0.180406 AGACGAATCCGGGAATTGGG 59.820 55.000 0.00 0.00 40.78 4.12
664 995 1.933853 GACAGACGAATCCGGGAATTG 59.066 52.381 0.00 0.00 40.78 2.32
665 996 1.831736 AGACAGACGAATCCGGGAATT 59.168 47.619 0.00 0.00 40.78 2.17
669 1000 0.460284 CCAAGACAGACGAATCCGGG 60.460 60.000 0.00 0.00 40.78 5.73
670 1001 0.460284 CCCAAGACAGACGAATCCGG 60.460 60.000 0.00 0.00 40.78 5.14
671 1002 1.084370 GCCCAAGACAGACGAATCCG 61.084 60.000 0.00 0.00 42.50 4.18
672 1003 0.250513 AGCCCAAGACAGACGAATCC 59.749 55.000 0.00 0.00 0.00 3.01
673 1004 1.363744 CAGCCCAAGACAGACGAATC 58.636 55.000 0.00 0.00 0.00 2.52
675 1006 1.371183 CCAGCCCAAGACAGACGAA 59.629 57.895 0.00 0.00 0.00 3.85
676 1007 3.059982 CCAGCCCAAGACAGACGA 58.940 61.111 0.00 0.00 0.00 4.20
677 1008 2.743928 GCCAGCCCAAGACAGACG 60.744 66.667 0.00 0.00 0.00 4.18
678 1009 2.360475 GGCCAGCCCAAGACAGAC 60.360 66.667 0.00 0.00 0.00 3.51
680 1011 1.228675 AAAGGCCAGCCCAAGACAG 60.229 57.895 5.01 0.00 36.58 3.51
681 1012 1.228552 GAAAGGCCAGCCCAAGACA 60.229 57.895 5.01 0.00 36.58 3.41
682 1013 0.827507 TTGAAAGGCCAGCCCAAGAC 60.828 55.000 5.01 0.00 36.58 3.01
683 1014 0.114954 ATTGAAAGGCCAGCCCAAGA 59.885 50.000 5.01 0.00 36.58 3.02
684 1015 0.533951 GATTGAAAGGCCAGCCCAAG 59.466 55.000 5.01 0.00 36.58 3.61
685 1016 0.114954 AGATTGAAAGGCCAGCCCAA 59.885 50.000 5.01 3.76 36.58 4.12
686 1017 0.612732 CAGATTGAAAGGCCAGCCCA 60.613 55.000 5.01 0.00 36.58 5.36
687 1018 0.323725 TCAGATTGAAAGGCCAGCCC 60.324 55.000 5.01 0.00 36.58 5.19
688 1019 1.101331 CTCAGATTGAAAGGCCAGCC 58.899 55.000 5.01 0.00 0.00 4.85
689 1020 0.455005 GCTCAGATTGAAAGGCCAGC 59.545 55.000 5.01 0.00 0.00 4.85
691 1022 0.324614 TCGCTCAGATTGAAAGGCCA 59.675 50.000 5.01 0.00 0.00 5.36
692 1023 1.453155 TTCGCTCAGATTGAAAGGCC 58.547 50.000 0.00 0.00 0.00 5.19
693 1024 3.127548 TGATTTCGCTCAGATTGAAAGGC 59.872 43.478 4.19 0.00 35.31 4.35
694 1025 4.394300 ACTGATTTCGCTCAGATTGAAAGG 59.606 41.667 13.99 0.00 44.48 3.11
695 1026 5.542616 ACTGATTTCGCTCAGATTGAAAG 57.457 39.130 13.99 0.00 44.48 2.62
696 1027 5.702670 AGAACTGATTTCGCTCAGATTGAAA 59.297 36.000 13.99 0.00 44.48 2.69
697 1028 5.240891 AGAACTGATTTCGCTCAGATTGAA 58.759 37.500 13.99 0.00 44.48 2.69
699 1030 4.033817 GGAGAACTGATTTCGCTCAGATTG 59.966 45.833 13.99 0.00 44.48 2.67
700 1031 4.187694 GGAGAACTGATTTCGCTCAGATT 58.812 43.478 13.99 6.70 44.48 2.40
701 1032 3.196469 TGGAGAACTGATTTCGCTCAGAT 59.804 43.478 13.99 4.71 44.48 2.90
702 1033 2.562738 TGGAGAACTGATTTCGCTCAGA 59.437 45.455 13.99 0.00 44.48 3.27
703 1034 2.964740 TGGAGAACTGATTTCGCTCAG 58.035 47.619 7.62 7.62 46.59 3.35
704 1035 3.616956 ATGGAGAACTGATTTCGCTCA 57.383 42.857 0.00 0.00 39.47 4.26
705 1036 6.422776 TTTTATGGAGAACTGATTTCGCTC 57.577 37.500 0.00 0.00 39.47 5.03
706 1037 6.431234 AGTTTTTATGGAGAACTGATTTCGCT 59.569 34.615 0.00 0.00 39.47 4.93
746 1077 6.895756 AGAAGGACAGTTTTTAGGGAGTTTTT 59.104 34.615 0.00 0.00 0.00 1.94
747 1078 6.432581 AGAAGGACAGTTTTTAGGGAGTTTT 58.567 36.000 0.00 0.00 0.00 2.43
749 1080 5.622180 GAGAAGGACAGTTTTTAGGGAGTT 58.378 41.667 0.00 0.00 0.00 3.01
750 1081 4.262506 CGAGAAGGACAGTTTTTAGGGAGT 60.263 45.833 0.00 0.00 0.00 3.85
752 1083 3.556423 GCGAGAAGGACAGTTTTTAGGGA 60.556 47.826 0.00 0.00 0.00 4.20
753 1084 2.742589 GCGAGAAGGACAGTTTTTAGGG 59.257 50.000 0.00 0.00 0.00 3.53
754 1085 2.742589 GGCGAGAAGGACAGTTTTTAGG 59.257 50.000 0.00 0.00 0.00 2.69
756 1087 3.070446 TCAGGCGAGAAGGACAGTTTTTA 59.930 43.478 0.00 0.00 0.00 1.52
757 1088 2.158813 TCAGGCGAGAAGGACAGTTTTT 60.159 45.455 0.00 0.00 0.00 1.94
758 1089 1.416401 TCAGGCGAGAAGGACAGTTTT 59.584 47.619 0.00 0.00 0.00 2.43
759 1090 1.048601 TCAGGCGAGAAGGACAGTTT 58.951 50.000 0.00 0.00 0.00 2.66
760 1091 1.270907 ATCAGGCGAGAAGGACAGTT 58.729 50.000 0.00 0.00 0.00 3.16
761 1092 1.270907 AATCAGGCGAGAAGGACAGT 58.729 50.000 0.00 0.00 0.00 3.55
763 1094 2.303022 AGAAAATCAGGCGAGAAGGACA 59.697 45.455 0.00 0.00 0.00 4.02
764 1095 2.675348 CAGAAAATCAGGCGAGAAGGAC 59.325 50.000 0.00 0.00 0.00 3.85
765 1096 2.355108 CCAGAAAATCAGGCGAGAAGGA 60.355 50.000 0.00 0.00 0.00 3.36
767 1098 1.399791 GCCAGAAAATCAGGCGAGAAG 59.600 52.381 0.00 0.00 39.26 2.85
768 1099 1.453155 GCCAGAAAATCAGGCGAGAA 58.547 50.000 0.00 0.00 39.26 2.87
769 1100 3.159298 GCCAGAAAATCAGGCGAGA 57.841 52.632 0.00 0.00 39.26 4.04
774 1105 2.089980 CACTCCAGCCAGAAAATCAGG 58.910 52.381 0.00 0.00 0.00 3.86
775 1106 2.089980 CCACTCCAGCCAGAAAATCAG 58.910 52.381 0.00 0.00 0.00 2.90
776 1107 1.704628 TCCACTCCAGCCAGAAAATCA 59.295 47.619 0.00 0.00 0.00 2.57
777 1108 2.087646 GTCCACTCCAGCCAGAAAATC 58.912 52.381 0.00 0.00 0.00 2.17
779 1110 0.250295 CGTCCACTCCAGCCAGAAAA 60.250 55.000 0.00 0.00 0.00 2.29
780 1111 1.118965 TCGTCCACTCCAGCCAGAAA 61.119 55.000 0.00 0.00 0.00 2.52
781 1112 1.533033 TCGTCCACTCCAGCCAGAA 60.533 57.895 0.00 0.00 0.00 3.02
784 1115 3.695606 GCTCGTCCACTCCAGCCA 61.696 66.667 0.00 0.00 0.00 4.75
785 1116 3.386237 AGCTCGTCCACTCCAGCC 61.386 66.667 0.00 0.00 31.81 4.85
786 1117 2.125753 CAGCTCGTCCACTCCAGC 60.126 66.667 0.00 0.00 0.00 4.85
788 1119 2.640302 GCTCAGCTCGTCCACTCCA 61.640 63.158 0.00 0.00 0.00 3.86
789 1120 1.882989 AAGCTCAGCTCGTCCACTCC 61.883 60.000 0.00 0.00 38.25 3.85
790 1121 0.811915 TAAGCTCAGCTCGTCCACTC 59.188 55.000 0.00 0.00 38.25 3.51
791 1122 0.528470 GTAAGCTCAGCTCGTCCACT 59.472 55.000 0.00 0.00 38.25 4.00
792 1123 0.458716 GGTAAGCTCAGCTCGTCCAC 60.459 60.000 0.00 0.00 38.25 4.02
793 1124 1.890894 GGTAAGCTCAGCTCGTCCA 59.109 57.895 0.00 0.00 38.25 4.02
794 1125 1.226717 CGGTAAGCTCAGCTCGTCC 60.227 63.158 0.00 1.86 38.25 4.79
795 1126 0.798771 CACGGTAAGCTCAGCTCGTC 60.799 60.000 8.83 0.00 38.25 4.20
797 1128 1.517257 CCACGGTAAGCTCAGCTCG 60.517 63.158 0.00 1.24 38.25 5.03
799 1130 1.592223 GTCCACGGTAAGCTCAGCT 59.408 57.895 0.00 0.00 42.56 4.24
800 1131 1.448013 GGTCCACGGTAAGCTCAGC 60.448 63.158 0.00 0.00 0.00 4.26
801 1132 1.153823 CGGTCCACGGTAAGCTCAG 60.154 63.158 0.00 0.00 39.42 3.35
802 1133 0.968901 ATCGGTCCACGGTAAGCTCA 60.969 55.000 0.00 0.00 44.45 4.26
803 1134 0.175073 AATCGGTCCACGGTAAGCTC 59.825 55.000 0.00 0.00 44.45 4.09
804 1135 0.611714 AAATCGGTCCACGGTAAGCT 59.388 50.000 0.00 0.00 44.45 3.74
805 1136 1.445871 AAAATCGGTCCACGGTAAGC 58.554 50.000 0.00 0.00 44.45 3.09
807 1138 2.425539 GGAAAAATCGGTCCACGGTAA 58.574 47.619 0.00 0.00 44.45 2.85
808 1139 1.338960 GGGAAAAATCGGTCCACGGTA 60.339 52.381 0.00 0.00 44.45 4.02
809 1140 0.607217 GGGAAAAATCGGTCCACGGT 60.607 55.000 0.00 0.00 44.45 4.83
811 1142 1.199097 CAAGGGAAAAATCGGTCCACG 59.801 52.381 0.00 0.00 46.11 4.94
812 1143 1.544246 CCAAGGGAAAAATCGGTCCAC 59.456 52.381 0.00 0.00 35.44 4.02
813 1144 1.917872 CCAAGGGAAAAATCGGTCCA 58.082 50.000 0.00 0.00 35.44 4.02
814 1145 0.530744 GCCAAGGGAAAAATCGGTCC 59.469 55.000 0.00 0.00 0.00 4.46
815 1146 1.545841 AGCCAAGGGAAAAATCGGTC 58.454 50.000 0.00 0.00 0.00 4.79
816 1147 2.224917 TGTAGCCAAGGGAAAAATCGGT 60.225 45.455 0.00 0.00 0.00 4.69
818 1149 3.669557 CGTTGTAGCCAAGGGAAAAATCG 60.670 47.826 0.00 0.00 33.78 3.34
819 1150 3.504520 TCGTTGTAGCCAAGGGAAAAATC 59.495 43.478 0.00 0.00 37.13 2.17
823 1154 1.418637 ACTCGTTGTAGCCAAGGGAAA 59.581 47.619 0.00 0.00 37.13 3.13
824 1155 1.001633 GACTCGTTGTAGCCAAGGGAA 59.998 52.381 0.00 0.00 37.13 3.97
825 1156 0.606604 GACTCGTTGTAGCCAAGGGA 59.393 55.000 0.00 0.00 37.13 4.20
826 1157 0.320374 TGACTCGTTGTAGCCAAGGG 59.680 55.000 0.00 0.00 37.13 3.95
827 1158 1.798813 GTTGACTCGTTGTAGCCAAGG 59.201 52.381 0.00 0.00 37.71 3.61
829 1160 1.067364 TCGTTGACTCGTTGTAGCCAA 59.933 47.619 0.00 0.00 0.00 4.52
830 1161 0.669619 TCGTTGACTCGTTGTAGCCA 59.330 50.000 0.00 0.00 0.00 4.75
831 1162 1.058404 GTCGTTGACTCGTTGTAGCC 58.942 55.000 0.00 0.00 0.00 3.93
832 1163 0.701303 CGTCGTTGACTCGTTGTAGC 59.299 55.000 0.00 0.00 0.00 3.58
833 1164 1.707117 CACGTCGTTGACTCGTTGTAG 59.293 52.381 0.00 0.00 35.62 2.74
834 1165 1.745566 CACGTCGTTGACTCGTTGTA 58.254 50.000 0.00 0.00 35.62 2.41
835 1166 1.477030 GCACGTCGTTGACTCGTTGT 61.477 55.000 0.00 0.00 35.62 3.32
836 1167 1.198397 GCACGTCGTTGACTCGTTG 59.802 57.895 0.00 0.00 35.62 4.10
839 1170 1.674611 GATGGCACGTCGTTGACTCG 61.675 60.000 0.00 0.00 0.00 4.18
840 1171 0.666274 TGATGGCACGTCGTTGACTC 60.666 55.000 0.00 0.00 0.00 3.36
841 1172 0.667487 CTGATGGCACGTCGTTGACT 60.667 55.000 0.00 0.00 0.00 3.41
842 1173 0.944311 ACTGATGGCACGTCGTTGAC 60.944 55.000 0.00 0.00 0.00 3.18
844 1175 0.163788 GAACTGATGGCACGTCGTTG 59.836 55.000 0.00 0.00 0.00 4.10
845 1176 0.033504 AGAACTGATGGCACGTCGTT 59.966 50.000 0.00 0.00 0.00 3.85
846 1177 0.885879 TAGAACTGATGGCACGTCGT 59.114 50.000 0.00 0.00 0.00 4.34
847 1178 1.990799 TTAGAACTGATGGCACGTCG 58.009 50.000 0.00 0.00 0.00 5.12
849 1180 4.156008 GGAATTTTAGAACTGATGGCACGT 59.844 41.667 0.00 0.00 0.00 4.49
851 1182 5.393461 CCAGGAATTTTAGAACTGATGGCAC 60.393 44.000 0.00 0.00 0.00 5.01
852 1183 4.706476 CCAGGAATTTTAGAACTGATGGCA 59.294 41.667 0.00 0.00 0.00 4.92
854 1185 4.098501 GCCCAGGAATTTTAGAACTGATGG 59.901 45.833 0.00 0.00 0.00 3.51
855 1186 4.952335 AGCCCAGGAATTTTAGAACTGATG 59.048 41.667 0.00 0.00 0.00 3.07
856 1187 4.952335 CAGCCCAGGAATTTTAGAACTGAT 59.048 41.667 0.00 0.00 0.00 2.90
857 1188 4.042809 TCAGCCCAGGAATTTTAGAACTGA 59.957 41.667 0.00 0.00 0.00 3.41
859 1190 4.336280 GTCAGCCCAGGAATTTTAGAACT 58.664 43.478 0.00 0.00 0.00 3.01
861 1192 3.697166 GGTCAGCCCAGGAATTTTAGAA 58.303 45.455 0.00 0.00 0.00 2.10
862 1193 2.355716 CGGTCAGCCCAGGAATTTTAGA 60.356 50.000 0.00 0.00 0.00 2.10
863 1194 2.017049 CGGTCAGCCCAGGAATTTTAG 58.983 52.381 0.00 0.00 0.00 1.85
864 1195 1.340600 CCGGTCAGCCCAGGAATTTTA 60.341 52.381 0.00 0.00 0.00 1.52
865 1196 0.611896 CCGGTCAGCCCAGGAATTTT 60.612 55.000 0.00 0.00 0.00 1.82
866 1197 1.000896 CCGGTCAGCCCAGGAATTT 60.001 57.895 0.00 0.00 0.00 1.82
867 1198 2.231380 ACCGGTCAGCCCAGGAATT 61.231 57.895 0.00 0.00 32.97 2.17
868 1199 2.610859 ACCGGTCAGCCCAGGAAT 60.611 61.111 0.00 0.00 32.97 3.01
869 1200 3.636231 CACCGGTCAGCCCAGGAA 61.636 66.667 2.59 0.00 32.97 3.36
870 1201 4.631740 TCACCGGTCAGCCCAGGA 62.632 66.667 2.59 0.00 32.97 3.86
871 1202 4.394712 GTCACCGGTCAGCCCAGG 62.395 72.222 2.59 0.00 34.31 4.45
872 1203 3.314331 AGTCACCGGTCAGCCCAG 61.314 66.667 2.59 0.00 0.00 4.45
873 1204 3.625897 CAGTCACCGGTCAGCCCA 61.626 66.667 2.59 0.00 0.00 5.36
874 1205 3.626924 ACAGTCACCGGTCAGCCC 61.627 66.667 2.59 0.00 0.00 5.19
875 1206 2.357517 CACAGTCACCGGTCAGCC 60.358 66.667 2.59 0.00 0.00 4.85
876 1207 1.373497 CTCACAGTCACCGGTCAGC 60.373 63.158 2.59 0.00 0.00 4.26
877 1208 1.373497 GCTCACAGTCACCGGTCAG 60.373 63.158 2.59 0.00 0.00 3.51
878 1209 2.131067 TGCTCACAGTCACCGGTCA 61.131 57.895 2.59 0.00 0.00 4.02
879 1210 1.664965 GTGCTCACAGTCACCGGTC 60.665 63.158 2.59 0.00 0.00 4.79
880 1211 2.421739 GTGCTCACAGTCACCGGT 59.578 61.111 0.00 0.00 0.00 5.28
881 1212 1.956170 GTGTGCTCACAGTCACCGG 60.956 63.158 13.83 0.00 42.74 5.28
882 1213 3.630204 GTGTGCTCACAGTCACCG 58.370 61.111 13.83 0.00 42.74 4.94
890 1221 1.174712 AATGGCTGGTGTGTGCTCAC 61.175 55.000 11.94 11.94 44.08 3.51
891 1222 1.151221 AATGGCTGGTGTGTGCTCA 59.849 52.632 0.00 0.00 0.00 4.26
892 1223 1.582968 CAATGGCTGGTGTGTGCTC 59.417 57.895 0.00 0.00 0.00 4.26
893 1224 2.567497 GCAATGGCTGGTGTGTGCT 61.567 57.895 0.00 0.00 36.96 4.40
894 1225 2.048877 GCAATGGCTGGTGTGTGC 60.049 61.111 0.00 0.00 36.96 4.57
895 1226 1.870055 GAGGCAATGGCTGGTGTGTG 61.870 60.000 15.83 0.00 38.98 3.82
896 1227 1.604593 GAGGCAATGGCTGGTGTGT 60.605 57.895 15.83 0.00 38.98 3.72
897 1228 2.345760 GGAGGCAATGGCTGGTGTG 61.346 63.158 15.83 0.00 38.98 3.82
898 1229 2.036256 GGAGGCAATGGCTGGTGT 59.964 61.111 15.83 0.00 38.98 4.16
899 1230 2.757099 GGGAGGCAATGGCTGGTG 60.757 66.667 15.83 0.00 38.98 4.17
900 1231 4.066139 GGGGAGGCAATGGCTGGT 62.066 66.667 15.83 0.00 38.98 4.00
901 1232 4.064768 TGGGGAGGCAATGGCTGG 62.065 66.667 15.83 0.00 38.98 4.85
902 1233 2.757099 GTGGGGAGGCAATGGCTG 60.757 66.667 15.83 0.00 38.98 4.85
903 1234 4.066139 GGTGGGGAGGCAATGGCT 62.066 66.667 9.72 9.72 42.48 4.75
904 1235 4.066139 AGGTGGGGAGGCAATGGC 62.066 66.667 0.00 0.00 40.13 4.40
905 1236 2.276740 GAGGTGGGGAGGCAATGG 59.723 66.667 0.00 0.00 0.00 3.16
906 1237 2.276740 GGAGGTGGGGAGGCAATG 59.723 66.667 0.00 0.00 0.00 2.82
907 1238 2.204291 TGGAGGTGGGGAGGCAAT 60.204 61.111 0.00 0.00 0.00 3.56
908 1239 3.256960 GTGGAGGTGGGGAGGCAA 61.257 66.667 0.00 0.00 0.00 4.52
909 1240 2.484868 TATGTGGAGGTGGGGAGGCA 62.485 60.000 0.00 0.00 0.00 4.75
910 1241 1.692749 TATGTGGAGGTGGGGAGGC 60.693 63.158 0.00 0.00 0.00 4.70
911 1242 1.345715 GGTATGTGGAGGTGGGGAGG 61.346 65.000 0.00 0.00 0.00 4.30
912 1243 0.620410 TGGTATGTGGAGGTGGGGAG 60.620 60.000 0.00 0.00 0.00 4.30
913 1244 0.912487 GTGGTATGTGGAGGTGGGGA 60.912 60.000 0.00 0.00 0.00 4.81
914 1245 0.914417 AGTGGTATGTGGAGGTGGGG 60.914 60.000 0.00 0.00 0.00 4.96
915 1246 0.253044 CAGTGGTATGTGGAGGTGGG 59.747 60.000 0.00 0.00 0.00 4.61
916 1247 0.392998 GCAGTGGTATGTGGAGGTGG 60.393 60.000 0.00 0.00 0.00 4.61
917 1248 0.740868 CGCAGTGGTATGTGGAGGTG 60.741 60.000 0.00 0.00 0.00 4.00
918 1249 1.192146 ACGCAGTGGTATGTGGAGGT 61.192 55.000 0.00 0.00 42.51 3.85
919 1250 0.036388 AACGCAGTGGTATGTGGAGG 60.036 55.000 0.00 0.00 45.00 4.30
920 1251 2.665649 TAACGCAGTGGTATGTGGAG 57.334 50.000 0.00 0.00 45.00 3.86
921 1252 3.527533 GATTAACGCAGTGGTATGTGGA 58.472 45.455 0.00 0.00 45.00 4.02
922 1253 2.612212 GGATTAACGCAGTGGTATGTGG 59.388 50.000 0.00 0.00 45.00 4.17
923 1254 3.531538 AGGATTAACGCAGTGGTATGTG 58.468 45.455 0.00 0.00 45.00 3.21
924 1255 3.196901 TGAGGATTAACGCAGTGGTATGT 59.803 43.478 0.00 0.00 45.00 2.29
925 1256 3.792401 TGAGGATTAACGCAGTGGTATG 58.208 45.455 0.00 0.00 45.00 2.39
926 1257 4.481368 TTGAGGATTAACGCAGTGGTAT 57.519 40.909 0.00 0.00 45.00 2.73
927 1258 3.965379 TTGAGGATTAACGCAGTGGTA 57.035 42.857 0.00 0.00 45.00 3.25
928 1259 2.851263 TTGAGGATTAACGCAGTGGT 57.149 45.000 0.00 0.00 45.00 4.16
929 1260 2.614057 GGATTGAGGATTAACGCAGTGG 59.386 50.000 0.00 0.00 45.00 4.00
930 1261 3.535561 AGGATTGAGGATTAACGCAGTG 58.464 45.455 0.00 0.00 45.00 3.66
932 1263 4.035675 GGAAAGGATTGAGGATTAACGCAG 59.964 45.833 0.00 0.00 0.00 5.18
933 1264 3.945285 GGAAAGGATTGAGGATTAACGCA 59.055 43.478 0.00 0.00 0.00 5.24
934 1265 3.945285 TGGAAAGGATTGAGGATTAACGC 59.055 43.478 0.00 0.00 0.00 4.84
935 1266 4.335594 GGTGGAAAGGATTGAGGATTAACG 59.664 45.833 0.00 0.00 0.00 3.18
936 1267 4.645136 GGGTGGAAAGGATTGAGGATTAAC 59.355 45.833 0.00 0.00 0.00 2.01
937 1268 4.627741 CGGGTGGAAAGGATTGAGGATTAA 60.628 45.833 0.00 0.00 0.00 1.40
938 1269 3.118038 CGGGTGGAAAGGATTGAGGATTA 60.118 47.826 0.00 0.00 0.00 1.75
939 1270 2.357154 CGGGTGGAAAGGATTGAGGATT 60.357 50.000 0.00 0.00 0.00 3.01
940 1271 1.212935 CGGGTGGAAAGGATTGAGGAT 59.787 52.381 0.00 0.00 0.00 3.24
941 1272 0.618458 CGGGTGGAAAGGATTGAGGA 59.382 55.000 0.00 0.00 0.00 3.71
942 1273 1.032114 GCGGGTGGAAAGGATTGAGG 61.032 60.000 0.00 0.00 0.00 3.86
943 1274 1.369091 CGCGGGTGGAAAGGATTGAG 61.369 60.000 0.00 0.00 0.00 3.02
944 1275 1.376683 CGCGGGTGGAAAGGATTGA 60.377 57.895 0.00 0.00 0.00 2.57
945 1276 3.051392 GCGCGGGTGGAAAGGATTG 62.051 63.158 8.83 0.00 0.00 2.67
946 1277 2.750237 GCGCGGGTGGAAAGGATT 60.750 61.111 8.83 0.00 0.00 3.01
947 1278 4.796495 GGCGCGGGTGGAAAGGAT 62.796 66.667 8.83 0.00 0.00 3.24
950 1281 3.431725 GAAGGCGCGGGTGGAAAG 61.432 66.667 8.83 0.00 0.00 2.62
951 1282 3.776347 TTGAAGGCGCGGGTGGAAA 62.776 57.895 8.83 0.00 0.00 3.13
952 1283 4.257654 TTGAAGGCGCGGGTGGAA 62.258 61.111 8.83 0.00 0.00 3.53
956 1287 4.265056 AAGGTTGAAGGCGCGGGT 62.265 61.111 8.83 0.00 0.00 5.28
957 1288 3.431725 GAAGGTTGAAGGCGCGGG 61.432 66.667 8.83 0.00 0.00 6.13
958 1289 1.791103 TTTGAAGGTTGAAGGCGCGG 61.791 55.000 8.83 0.00 0.00 6.46
959 1290 0.385974 CTTTGAAGGTTGAAGGCGCG 60.386 55.000 0.00 0.00 0.00 6.86
960 1291 0.664466 GCTTTGAAGGTTGAAGGCGC 60.664 55.000 0.00 0.00 0.00 6.53
961 1292 0.667993 TGCTTTGAAGGTTGAAGGCG 59.332 50.000 0.00 0.00 29.47 5.52
962 1293 1.269778 GGTGCTTTGAAGGTTGAAGGC 60.270 52.381 0.00 0.00 0.00 4.35
963 1294 2.310538 AGGTGCTTTGAAGGTTGAAGG 58.689 47.619 0.00 0.00 0.00 3.46
964 1295 3.709987 CAAGGTGCTTTGAAGGTTGAAG 58.290 45.455 0.00 0.00 0.00 3.02
965 1296 2.159114 GCAAGGTGCTTTGAAGGTTGAA 60.159 45.455 0.00 0.00 40.96 2.69
966 1297 1.408702 GCAAGGTGCTTTGAAGGTTGA 59.591 47.619 0.00 0.00 40.96 3.18
967 1298 1.538849 GGCAAGGTGCTTTGAAGGTTG 60.539 52.381 0.00 0.00 44.28 3.77
968 1299 0.752658 GGCAAGGTGCTTTGAAGGTT 59.247 50.000 0.00 0.00 44.28 3.50
1012 1343 2.681848 CAAAGCATGAGGATGAGGTGAC 59.318 50.000 0.00 0.00 0.00 3.67
1016 1347 2.054232 AGCAAAGCATGAGGATGAGG 57.946 50.000 0.00 0.00 0.00 3.86
1017 1348 3.181489 GGAAAGCAAAGCATGAGGATGAG 60.181 47.826 0.00 0.00 0.00 2.90
1018 1349 2.756760 GGAAAGCAAAGCATGAGGATGA 59.243 45.455 0.00 0.00 0.00 2.92
1019 1350 2.758979 AGGAAAGCAAAGCATGAGGATG 59.241 45.455 0.00 0.00 0.00 3.51
1020 1351 3.097342 AGGAAAGCAAAGCATGAGGAT 57.903 42.857 0.00 0.00 0.00 3.24
1021 1352 2.592102 AGGAAAGCAAAGCATGAGGA 57.408 45.000 0.00 0.00 0.00 3.71
1059 1390 2.282603 TTGGGGTTTAGCGTGGGC 60.283 61.111 0.00 0.00 40.37 5.36
1089 1420 1.377856 GGCAAAGAGGAGGAGCACC 60.378 63.158 0.00 0.00 0.00 5.01
1108 1439 0.250513 GAGTCAAGGAAGGCGGTGAT 59.749 55.000 0.00 0.00 0.00 3.06
1160 1491 4.451150 GGCTGCCCATGTCGTCGA 62.451 66.667 7.66 0.00 0.00 4.20
1166 1497 2.599645 GATGAGACGGCTGCCCATGT 62.600 60.000 14.12 5.11 0.00 3.21
1210 1541 2.813908 CTTGGTGTACTCGGCGCC 60.814 66.667 19.07 19.07 37.06 6.53
1222 1553 1.228894 TCTCCTCCGTGAGCTTGGT 60.229 57.895 0.00 0.00 32.22 3.67
1247 1599 1.079681 TTTGTACCGCTACCGCCTG 60.080 57.895 0.00 0.00 0.00 4.85
1250 1602 1.419107 GAGCTTTGTACCGCTACCGC 61.419 60.000 0.00 0.00 36.45 5.68
1256 1608 0.460459 GAGGAGGAGCTTTGTACCGC 60.460 60.000 0.00 0.00 0.00 5.68
1257 1609 0.895530 TGAGGAGGAGCTTTGTACCG 59.104 55.000 0.00 0.00 0.00 4.02
1258 1610 2.501723 TGATGAGGAGGAGCTTTGTACC 59.498 50.000 0.00 0.00 0.00 3.34
1288 7319 3.916392 GACCACCGACGACCAGCTG 62.916 68.421 6.78 6.78 0.00 4.24
1291 7322 2.258591 CAGACCACCGACGACCAG 59.741 66.667 0.00 0.00 0.00 4.00
1312 7343 2.290122 ATCTGCTTGACGAGGCCGAG 62.290 60.000 0.00 0.00 39.50 4.63
1318 7349 0.869454 GCGAGGATCTGCTTGACGAG 60.869 60.000 0.00 0.00 33.14 4.18
1347 7378 1.380112 GGAGTAGGTCGTGGAGGCT 60.380 63.158 0.00 0.00 0.00 4.58
1410 7441 1.144936 CTTCACGCTGATCCTCCCC 59.855 63.158 0.00 0.00 0.00 4.81
1861 7898 2.584835 TGGTAGTAGTACACCGTGGT 57.415 50.000 9.89 0.00 37.66 4.16
1917 7954 4.174009 ACACATGCACGCTTACTAGTAAG 58.826 43.478 30.40 30.40 43.98 2.34
1959 7996 5.479306 TGTGACGAAGGAGGAAATTCTTAG 58.521 41.667 0.00 0.00 0.00 2.18
1960 7997 5.477607 TGTGACGAAGGAGGAAATTCTTA 57.522 39.130 0.00 0.00 0.00 2.10
2042 8086 6.587206 TCAACCAATTGATTGCTGTTGATA 57.413 33.333 16.72 2.56 40.57 2.15
2049 8093 5.279156 GGAGAAGTTCAACCAATTGATTGCT 60.279 40.000 7.75 0.00 44.36 3.91
2152 8198 7.613585 TGTTCATTTGGACAATTCTGCATTAT 58.386 30.769 0.00 0.00 0.00 1.28
2155 8201 5.471556 TGTTCATTTGGACAATTCTGCAT 57.528 34.783 0.00 0.00 0.00 3.96
2156 8202 4.933505 TGTTCATTTGGACAATTCTGCA 57.066 36.364 0.00 0.00 0.00 4.41
2157 8203 4.628333 CCATGTTCATTTGGACAATTCTGC 59.372 41.667 0.00 0.00 34.81 4.26
2158 8204 4.628333 GCCATGTTCATTTGGACAATTCTG 59.372 41.667 0.00 0.00 34.81 3.02
2218 8294 4.406003 TGGCCTTTCTGAGTTATACCTCTC 59.594 45.833 3.32 0.00 32.50 3.20
2233 8309 2.833794 TGCGACAGTATATGGCCTTTC 58.166 47.619 3.32 0.00 30.50 2.62
2250 8326 1.933115 GCCAGTGTTTACCCCATGCG 61.933 60.000 0.00 0.00 0.00 4.73
2402 8480 5.546526 TGGCGTTATTCTCATGCATGTATA 58.453 37.500 25.43 17.45 0.00 1.47
2446 8524 8.773645 CATGTGACATTGTTCTACTTGTTAAGA 58.226 33.333 0.00 0.00 0.00 2.10
2452 8530 6.605849 CCTTCATGTGACATTGTTCTACTTG 58.394 40.000 0.00 1.06 0.00 3.16
2501 8579 3.054287 TCGTGGCCCCTCACAATTATAAA 60.054 43.478 0.00 0.00 37.50 1.40
2513 8591 1.228154 GAGTTGTTTCGTGGCCCCT 60.228 57.895 0.00 0.00 0.00 4.79
2533 8611 6.426980 TGACATTGTGATCAGTTAGATTGC 57.573 37.500 0.00 0.00 37.00 3.56
2559 8637 6.311200 GTCCAATGCTTCCATGTGTAAAATTC 59.689 38.462 0.00 0.00 0.00 2.17
2572 8650 2.648059 AGCACTATGTCCAATGCTTCC 58.352 47.619 0.00 0.00 46.06 3.46
2607 8685 2.101582 CGGGGACTCTACCAAGATGAAG 59.898 54.545 0.00 0.00 0.00 3.02
2624 8702 2.800544 GTGTCATTATCGATCAACGGGG 59.199 50.000 0.00 0.00 42.82 5.73
2663 8741 4.884744 TGTTAGCACAACAACACCTGTATT 59.115 37.500 1.74 0.00 37.23 1.89
2681 8759 7.313951 CTTTCAGGAAAGGAGCTATTGTTAG 57.686 40.000 12.82 0.00 42.96 2.34
2696 8776 7.568738 TGGTATCTCATATTCTCCTTTCAGGAA 59.431 37.037 0.00 0.00 45.28 3.36
2754 8834 4.144297 CCTTGAGATGGTCCAACTTTTCA 58.856 43.478 2.74 0.00 0.00 2.69
2757 8837 3.884037 ACCTTGAGATGGTCCAACTTT 57.116 42.857 2.74 0.00 31.03 2.66
2768 8848 5.472820 CAGAGCTTGAAGAAAACCTTGAGAT 59.527 40.000 0.00 0.00 34.68 2.75
2906 8988 8.527810 TCCCAAACCATGTTGAAATATTAGTTC 58.472 33.333 0.00 0.00 0.00 3.01
2919 9001 2.045524 TGCACAATCCCAAACCATGTT 58.954 42.857 0.00 0.00 0.00 2.71
2920 9002 1.714541 TGCACAATCCCAAACCATGT 58.285 45.000 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.