Multiple sequence alignment - TraesCS2A01G491000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G491000 chr2A 100.000 6800 0 0 1 6800 724296632 724303431 0.000000e+00 12558.0
1 TraesCS2A01G491000 chr2A 89.056 466 33 11 980 1436 724118090 724118546 4.600000e-156 562.0
2 TraesCS2A01G491000 chr2A 89.783 323 22 5 1874 2186 724125056 724125377 2.950000e-108 403.0
3 TraesCS2A01G491000 chr2A 86.139 101 12 2 1122 1221 755769248 755769347 2.590000e-19 108.0
4 TraesCS2A01G491000 chr2A 93.750 48 2 1 2182 2229 724125647 724125693 3.400000e-08 71.3
5 TraesCS2A01G491000 chr2D 90.230 6387 366 116 506 6800 589973284 589979504 0.000000e+00 8100.0
6 TraesCS2A01G491000 chr2D 88.929 560 32 17 1674 2229 589904482 589905015 0.000000e+00 664.0
7 TraesCS2A01G491000 chr2D 86.631 374 36 7 1262 1634 610955352 610954992 1.060000e-107 401.0
8 TraesCS2A01G491000 chr2D 92.453 53 4 0 6290 6342 22604163 22604215 7.310000e-10 76.8
9 TraesCS2A01G491000 chr2B 91.227 5198 303 82 482 5599 714127591 714132715 0.000000e+00 6931.0
10 TraesCS2A01G491000 chr2B 92.057 491 30 4 5612 6099 714132824 714133308 0.000000e+00 682.0
11 TraesCS2A01G491000 chr2B 89.149 470 14 14 6359 6800 714133727 714134187 9.970000e-153 551.0
12 TraesCS2A01G491000 chr2B 86.139 101 12 2 1122 1221 766557990 766558089 2.590000e-19 108.0
13 TraesCS2A01G491000 chr7B 93.045 1179 45 5 3501 4672 13305475 13304327 0.000000e+00 1688.0
14 TraesCS2A01G491000 chr7D 87.968 374 34 6 1262 1634 19682955 19683318 1.350000e-116 431.0
15 TraesCS2A01G491000 chr1B 87.335 379 36 7 1262 1639 182652887 182653254 2.270000e-114 424.0
16 TraesCS2A01G491000 chr7A 86.842 380 35 10 1262 1639 298770294 298770660 1.770000e-110 411.0
17 TraesCS2A01G491000 chr5B 86.544 379 39 7 1262 1639 641117478 641117845 2.280000e-109 407.0
18 TraesCS2A01G491000 chr5B 92.308 52 4 0 6291 6342 508801379 508801328 2.630000e-09 75.0
19 TraesCS2A01G491000 chr5D 85.938 384 37 10 1262 1639 537939956 537940328 1.780000e-105 394.0
20 TraesCS2A01G491000 chr4A 85.751 386 40 9 1262 1646 347705453 347705082 1.780000e-105 394.0
21 TraesCS2A01G491000 chr4A 100.000 29 0 0 6772 6800 665636803 665636775 3.000000e-03 54.7
22 TraesCS2A01G491000 chr6B 86.916 107 12 2 1120 1225 140604462 140604357 1.200000e-22 119.0
23 TraesCS2A01G491000 chr6A 85.047 107 14 2 1117 1222 83251693 83251798 2.590000e-19 108.0
24 TraesCS2A01G491000 chr3D 85.859 99 12 2 1130 1227 552003063 552002966 3.350000e-18 104.0
25 TraesCS2A01G491000 chr3A 86.458 96 11 2 1130 1224 688693475 688693381 3.350000e-18 104.0
26 TraesCS2A01G491000 chr4B 90.385 52 5 0 6291 6342 495397495 495397444 1.220000e-07 69.4
27 TraesCS2A01G491000 chr3B 100.000 29 0 0 6772 6800 83504585 83504557 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G491000 chr2A 724296632 724303431 6799 False 12558.000000 12558 100.0000 1 6800 1 chr2A.!!$F2 6799
1 TraesCS2A01G491000 chr2A 724125056 724125693 637 False 237.150000 403 91.7665 1874 2229 2 chr2A.!!$F4 355
2 TraesCS2A01G491000 chr2D 589973284 589979504 6220 False 8100.000000 8100 90.2300 506 6800 1 chr2D.!!$F3 6294
3 TraesCS2A01G491000 chr2D 589904482 589905015 533 False 664.000000 664 88.9290 1674 2229 1 chr2D.!!$F2 555
4 TraesCS2A01G491000 chr2B 714127591 714134187 6596 False 2721.333333 6931 90.8110 482 6800 3 chr2B.!!$F2 6318
5 TraesCS2A01G491000 chr7B 13304327 13305475 1148 True 1688.000000 1688 93.0450 3501 4672 1 chr7B.!!$R1 1171

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.031111 TCCTTCATCCCCGGAGTCAT 60.031 55.000 0.73 0.00 0.00 3.06 F
299 300 0.035056 GGGGTGAACTGACTCCATGG 60.035 60.000 4.97 4.97 36.36 3.66 F
301 302 0.035056 GGTGAACTGACTCCATGGGG 60.035 60.000 11.11 11.11 0.00 4.96 F
987 1030 0.035439 TCGGCCCTCTGTTGGATTTC 60.035 55.000 0.00 0.00 0.00 2.17 F
1510 1564 0.396695 AGCCCTGATGAATGCTTGGG 60.397 55.000 0.00 0.00 37.76 4.12 F
2282 2633 1.496001 TGGACCCAGCTTGCATGATAT 59.504 47.619 3.33 0.00 0.00 1.63 F
3042 3425 0.881159 CGCCGTTTGTGGTTCCTGTA 60.881 55.000 0.00 0.00 0.00 2.74 F
4366 4755 0.610687 CTCGGAGGAGCAAGAAAGGT 59.389 55.000 0.00 0.00 32.61 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1240 1288 0.668706 CAGAGCAGGACTGTTCGTGG 60.669 60.000 9.94 2.01 44.12 4.94 R
1492 1545 0.685458 ACCCAAGCATTCATCAGGGC 60.685 55.000 0.00 0.00 39.97 5.19 R
1509 1563 1.239347 GCCTGTGGAAGACAAGAACC 58.761 55.000 0.00 0.00 32.80 3.62 R
1954 2019 1.262683 GCATCGAGTAATCCTGCAAGC 59.737 52.381 7.33 0.00 33.13 4.01 R
2719 3100 2.721425 TTTGTCAGGAAGGGACGTTT 57.279 45.000 0.00 0.00 38.10 3.60 R
4222 4611 2.373169 AGAAACTGAATCAGTGGCAGGA 59.627 45.455 17.46 0.00 44.62 3.86 R
4419 4808 1.470098 GCAGTTGGTCATCGCAAATCT 59.530 47.619 0.00 0.00 0.00 2.40 R
6052 6559 0.246086 CAGGCTCTCTCGACAAAGCT 59.754 55.000 7.78 0.00 35.12 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.715015 GCTCGGGGGTCTTCTTCT 58.285 61.111 0.00 0.00 0.00 2.85
18 19 1.518302 GCTCGGGGGTCTTCTTCTC 59.482 63.158 0.00 0.00 0.00 2.87
19 20 1.962321 GCTCGGGGGTCTTCTTCTCC 61.962 65.000 0.00 0.00 0.00 3.71
20 21 0.324830 CTCGGGGGTCTTCTTCTCCT 60.325 60.000 0.00 0.00 0.00 3.69
21 22 0.116541 TCGGGGGTCTTCTTCTCCTT 59.883 55.000 0.00 0.00 0.00 3.36
22 23 0.537653 CGGGGGTCTTCTTCTCCTTC 59.462 60.000 0.00 0.00 0.00 3.46
23 24 1.657804 GGGGGTCTTCTTCTCCTTCA 58.342 55.000 0.00 0.00 0.00 3.02
24 25 2.200955 GGGGGTCTTCTTCTCCTTCAT 58.799 52.381 0.00 0.00 0.00 2.57
25 26 2.171659 GGGGGTCTTCTTCTCCTTCATC 59.828 54.545 0.00 0.00 0.00 2.92
26 27 2.171659 GGGGTCTTCTTCTCCTTCATCC 59.828 54.545 0.00 0.00 0.00 3.51
27 28 2.171659 GGGTCTTCTTCTCCTTCATCCC 59.828 54.545 0.00 0.00 0.00 3.85
28 29 2.171659 GGTCTTCTTCTCCTTCATCCCC 59.828 54.545 0.00 0.00 0.00 4.81
29 30 2.111384 TCTTCTTCTCCTTCATCCCCG 58.889 52.381 0.00 0.00 0.00 5.73
30 31 1.139853 CTTCTTCTCCTTCATCCCCGG 59.860 57.143 0.00 0.00 0.00 5.73
31 32 0.338467 TCTTCTCCTTCATCCCCGGA 59.662 55.000 0.73 0.00 0.00 5.14
32 33 0.755686 CTTCTCCTTCATCCCCGGAG 59.244 60.000 0.73 0.00 44.48 4.63
33 34 0.042731 TTCTCCTTCATCCCCGGAGT 59.957 55.000 0.73 0.00 43.73 3.85
34 35 0.397254 TCTCCTTCATCCCCGGAGTC 60.397 60.000 0.73 0.00 43.73 3.36
35 36 0.687757 CTCCTTCATCCCCGGAGTCA 60.688 60.000 0.73 0.00 39.54 3.41
36 37 0.031111 TCCTTCATCCCCGGAGTCAT 60.031 55.000 0.73 0.00 0.00 3.06
37 38 0.839946 CCTTCATCCCCGGAGTCATT 59.160 55.000 0.73 0.00 0.00 2.57
38 39 1.475751 CCTTCATCCCCGGAGTCATTG 60.476 57.143 0.73 0.00 0.00 2.82
39 40 0.107214 TTCATCCCCGGAGTCATTGC 60.107 55.000 0.73 0.00 0.00 3.56
40 41 0.982852 TCATCCCCGGAGTCATTGCT 60.983 55.000 0.73 0.00 0.00 3.91
41 42 0.816825 CATCCCCGGAGTCATTGCTG 60.817 60.000 0.73 0.00 0.00 4.41
42 43 0.982852 ATCCCCGGAGTCATTGCTGA 60.983 55.000 0.73 0.00 0.00 4.26
43 44 1.153289 CCCCGGAGTCATTGCTGAG 60.153 63.158 0.73 0.00 30.18 3.35
44 45 1.599047 CCCGGAGTCATTGCTGAGT 59.401 57.895 0.73 0.00 37.77 3.41
45 46 0.460987 CCCGGAGTCATTGCTGAGTC 60.461 60.000 0.73 2.83 46.81 3.36
48 49 2.378028 GAGTCATTGCTGAGTCGCC 58.622 57.895 4.84 0.00 40.93 5.54
49 50 1.416813 GAGTCATTGCTGAGTCGCCG 61.417 60.000 4.84 0.00 40.93 6.46
50 51 2.815211 TCATTGCTGAGTCGCCGC 60.815 61.111 4.84 0.00 0.00 6.53
51 52 2.816958 CATTGCTGAGTCGCCGCT 60.817 61.111 4.84 0.00 0.00 5.52
52 53 2.510238 ATTGCTGAGTCGCCGCTC 60.510 61.111 4.84 2.27 36.12 5.03
53 54 4.742201 TTGCTGAGTCGCCGCTCC 62.742 66.667 6.18 0.00 34.74 4.70
73 74 4.347453 GCCTGCCGCACAAGGTTG 62.347 66.667 0.00 0.00 37.47 3.77
74 75 4.347453 CCTGCCGCACAAGGTTGC 62.347 66.667 0.00 0.00 39.28 4.17
75 76 3.289834 CTGCCGCACAAGGTTGCT 61.290 61.111 0.00 0.00 40.62 3.91
76 77 1.965930 CTGCCGCACAAGGTTGCTA 60.966 57.895 0.00 0.00 40.62 3.49
77 78 1.915614 CTGCCGCACAAGGTTGCTAG 61.916 60.000 0.00 0.00 40.62 3.42
78 79 2.690778 GCCGCACAAGGTTGCTAGG 61.691 63.158 0.00 0.00 40.62 3.02
79 80 1.302511 CCGCACAAGGTTGCTAGGT 60.303 57.895 0.00 0.00 40.62 3.08
80 81 0.036765 CCGCACAAGGTTGCTAGGTA 60.037 55.000 0.00 0.00 40.62 3.08
81 82 1.076332 CGCACAAGGTTGCTAGGTAC 58.924 55.000 0.00 0.00 40.62 3.34
82 83 1.076332 GCACAAGGTTGCTAGGTACG 58.924 55.000 0.00 0.00 39.59 3.67
83 84 1.607251 GCACAAGGTTGCTAGGTACGT 60.607 52.381 0.00 0.00 39.59 3.57
84 85 2.353011 GCACAAGGTTGCTAGGTACGTA 60.353 50.000 0.00 0.00 39.59 3.57
85 86 3.248266 CACAAGGTTGCTAGGTACGTAC 58.752 50.000 17.56 17.56 0.00 3.67
86 87 2.095059 ACAAGGTTGCTAGGTACGTACG 60.095 50.000 18.98 15.01 0.00 3.67
87 88 1.826385 AGGTTGCTAGGTACGTACGT 58.174 50.000 25.98 25.98 0.00 3.57
88 89 2.985896 AGGTTGCTAGGTACGTACGTA 58.014 47.619 23.60 23.60 0.00 3.57
99 100 3.389741 CGTACGTACGTTCTTGGCT 57.610 52.632 33.95 0.45 44.13 4.75
100 101 1.689959 CGTACGTACGTTCTTGGCTT 58.310 50.000 33.95 0.00 44.13 4.35
101 102 1.645751 CGTACGTACGTTCTTGGCTTC 59.354 52.381 33.95 5.42 44.13 3.86
102 103 1.988467 GTACGTACGTTCTTGGCTTCC 59.012 52.381 27.92 0.00 0.00 3.46
103 104 0.677842 ACGTACGTTCTTGGCTTCCT 59.322 50.000 16.72 0.00 0.00 3.36
104 105 1.336609 ACGTACGTTCTTGGCTTCCTC 60.337 52.381 16.72 0.00 0.00 3.71
105 106 1.067776 CGTACGTTCTTGGCTTCCTCT 60.068 52.381 7.22 0.00 0.00 3.69
106 107 2.609737 CGTACGTTCTTGGCTTCCTCTT 60.610 50.000 7.22 0.00 0.00 2.85
107 108 1.884235 ACGTTCTTGGCTTCCTCTTG 58.116 50.000 0.00 0.00 0.00 3.02
108 109 0.519077 CGTTCTTGGCTTCCTCTTGC 59.481 55.000 0.00 0.00 0.00 4.01
113 114 2.759795 GGCTTCCTCTTGCCCACT 59.240 61.111 0.00 0.00 43.11 4.00
114 115 1.075659 GGCTTCCTCTTGCCCACTT 59.924 57.895 0.00 0.00 43.11 3.16
115 116 0.540597 GGCTTCCTCTTGCCCACTTT 60.541 55.000 0.00 0.00 43.11 2.66
116 117 1.332195 GCTTCCTCTTGCCCACTTTT 58.668 50.000 0.00 0.00 0.00 2.27
117 118 1.270826 GCTTCCTCTTGCCCACTTTTC 59.729 52.381 0.00 0.00 0.00 2.29
118 119 1.537202 CTTCCTCTTGCCCACTTTTCG 59.463 52.381 0.00 0.00 0.00 3.46
119 120 0.762418 TCCTCTTGCCCACTTTTCGA 59.238 50.000 0.00 0.00 0.00 3.71
120 121 1.351017 TCCTCTTGCCCACTTTTCGAT 59.649 47.619 0.00 0.00 0.00 3.59
121 122 1.740025 CCTCTTGCCCACTTTTCGATC 59.260 52.381 0.00 0.00 0.00 3.69
122 123 2.426522 CTCTTGCCCACTTTTCGATCA 58.573 47.619 0.00 0.00 0.00 2.92
123 124 2.813754 CTCTTGCCCACTTTTCGATCAA 59.186 45.455 0.00 0.00 0.00 2.57
124 125 2.552315 TCTTGCCCACTTTTCGATCAAC 59.448 45.455 0.00 0.00 0.00 3.18
125 126 2.270352 TGCCCACTTTTCGATCAACT 57.730 45.000 0.00 0.00 0.00 3.16
126 127 2.151202 TGCCCACTTTTCGATCAACTC 58.849 47.619 0.00 0.00 0.00 3.01
127 128 1.468914 GCCCACTTTTCGATCAACTCC 59.531 52.381 0.00 0.00 0.00 3.85
128 129 2.876079 GCCCACTTTTCGATCAACTCCT 60.876 50.000 0.00 0.00 0.00 3.69
129 130 3.003480 CCCACTTTTCGATCAACTCCTC 58.997 50.000 0.00 0.00 0.00 3.71
130 131 2.668457 CCACTTTTCGATCAACTCCTCG 59.332 50.000 0.00 0.00 36.25 4.63
131 132 3.318017 CACTTTTCGATCAACTCCTCGT 58.682 45.455 0.00 0.00 36.33 4.18
132 133 3.741344 CACTTTTCGATCAACTCCTCGTT 59.259 43.478 0.00 0.00 36.33 3.85
140 141 1.439679 CAACTCCTCGTTGCTTACCC 58.560 55.000 0.00 0.00 45.70 3.69
141 142 0.037605 AACTCCTCGTTGCTTACCCG 60.038 55.000 0.00 0.00 33.72 5.28
142 143 0.896940 ACTCCTCGTTGCTTACCCGA 60.897 55.000 0.00 0.00 0.00 5.14
143 144 0.460311 CTCCTCGTTGCTTACCCGAT 59.540 55.000 0.00 0.00 0.00 4.18
144 145 0.458669 TCCTCGTTGCTTACCCGATC 59.541 55.000 0.00 0.00 0.00 3.69
145 146 0.174845 CCTCGTTGCTTACCCGATCA 59.825 55.000 0.00 0.00 0.00 2.92
146 147 1.278238 CTCGTTGCTTACCCGATCAC 58.722 55.000 0.00 0.00 0.00 3.06
147 148 0.108520 TCGTTGCTTACCCGATCACC 60.109 55.000 0.00 0.00 0.00 4.02
148 149 0.390603 CGTTGCTTACCCGATCACCA 60.391 55.000 0.00 0.00 0.00 4.17
149 150 1.742411 CGTTGCTTACCCGATCACCAT 60.742 52.381 0.00 0.00 0.00 3.55
150 151 2.365582 GTTGCTTACCCGATCACCATT 58.634 47.619 0.00 0.00 0.00 3.16
151 152 2.752903 GTTGCTTACCCGATCACCATTT 59.247 45.455 0.00 0.00 0.00 2.32
152 153 3.080300 TGCTTACCCGATCACCATTTT 57.920 42.857 0.00 0.00 0.00 1.82
153 154 3.426615 TGCTTACCCGATCACCATTTTT 58.573 40.909 0.00 0.00 0.00 1.94
154 155 4.590918 TGCTTACCCGATCACCATTTTTA 58.409 39.130 0.00 0.00 0.00 1.52
155 156 5.010933 TGCTTACCCGATCACCATTTTTAA 58.989 37.500 0.00 0.00 0.00 1.52
156 157 5.654650 TGCTTACCCGATCACCATTTTTAAT 59.345 36.000 0.00 0.00 0.00 1.40
157 158 6.183360 TGCTTACCCGATCACCATTTTTAATC 60.183 38.462 0.00 0.00 0.00 1.75
158 159 6.183360 GCTTACCCGATCACCATTTTTAATCA 60.183 38.462 0.00 0.00 0.00 2.57
159 160 5.576447 ACCCGATCACCATTTTTAATCAC 57.424 39.130 0.00 0.00 0.00 3.06
160 161 4.401202 ACCCGATCACCATTTTTAATCACC 59.599 41.667 0.00 0.00 0.00 4.02
161 162 4.400884 CCCGATCACCATTTTTAATCACCA 59.599 41.667 0.00 0.00 0.00 4.17
162 163 5.339990 CCGATCACCATTTTTAATCACCAC 58.660 41.667 0.00 0.00 0.00 4.16
163 164 5.125417 CCGATCACCATTTTTAATCACCACT 59.875 40.000 0.00 0.00 0.00 4.00
164 165 6.029607 CGATCACCATTTTTAATCACCACTG 58.970 40.000 0.00 0.00 0.00 3.66
165 166 5.132897 TCACCATTTTTAATCACCACTGC 57.867 39.130 0.00 0.00 0.00 4.40
166 167 4.832266 TCACCATTTTTAATCACCACTGCT 59.168 37.500 0.00 0.00 0.00 4.24
167 168 5.304101 TCACCATTTTTAATCACCACTGCTT 59.696 36.000 0.00 0.00 0.00 3.91
168 169 5.406175 CACCATTTTTAATCACCACTGCTTG 59.594 40.000 0.00 0.00 0.00 4.01
169 170 4.389687 CCATTTTTAATCACCACTGCTTGC 59.610 41.667 0.00 0.00 0.00 4.01
170 171 4.935352 TTTTTAATCACCACTGCTTGCT 57.065 36.364 0.00 0.00 0.00 3.91
171 172 6.389091 CATTTTTAATCACCACTGCTTGCTA 58.611 36.000 0.00 0.00 0.00 3.49
172 173 5.627499 TTTTAATCACCACTGCTTGCTAG 57.373 39.130 0.00 0.00 0.00 3.42
173 174 2.867109 AATCACCACTGCTTGCTAGT 57.133 45.000 0.00 0.00 0.00 2.57
174 175 3.981071 AATCACCACTGCTTGCTAGTA 57.019 42.857 0.00 0.00 0.00 1.82
175 176 2.743636 TCACCACTGCTTGCTAGTAC 57.256 50.000 0.00 0.00 0.00 2.73
176 177 2.248248 TCACCACTGCTTGCTAGTACT 58.752 47.619 0.00 0.00 0.00 2.73
177 178 3.427573 TCACCACTGCTTGCTAGTACTA 58.572 45.455 1.89 1.89 0.00 1.82
178 179 3.192844 TCACCACTGCTTGCTAGTACTAC 59.807 47.826 0.00 0.00 0.00 2.73
179 180 3.193691 CACCACTGCTTGCTAGTACTACT 59.806 47.826 0.00 0.00 0.00 2.57
180 181 3.833070 ACCACTGCTTGCTAGTACTACTT 59.167 43.478 0.00 0.00 0.00 2.24
181 182 4.177026 CCACTGCTTGCTAGTACTACTTG 58.823 47.826 0.00 0.00 0.00 3.16
182 183 4.177026 CACTGCTTGCTAGTACTACTTGG 58.823 47.826 0.00 0.00 0.00 3.61
183 184 3.190874 CTGCTTGCTAGTACTACTTGGC 58.809 50.000 0.00 1.65 0.00 4.52
184 185 2.565391 TGCTTGCTAGTACTACTTGGCA 59.435 45.455 9.76 9.76 35.26 4.92
185 186 3.190874 GCTTGCTAGTACTACTTGGCAG 58.809 50.000 12.62 9.37 37.18 4.85
186 187 3.368531 GCTTGCTAGTACTACTTGGCAGT 60.369 47.826 12.62 0.00 37.18 4.40
187 188 4.142227 GCTTGCTAGTACTACTTGGCAGTA 60.142 45.833 12.62 1.87 37.18 2.74
194 195 2.015736 CTACTTGGCAGTAGCACCAG 57.984 55.000 9.95 0.00 44.85 4.00
195 196 0.036388 TACTTGGCAGTAGCACCAGC 60.036 55.000 0.00 0.00 44.61 4.85
207 208 2.100605 GCACCAGCTTAGCTTACAGT 57.899 50.000 3.00 0.00 36.40 3.55
208 209 1.734465 GCACCAGCTTAGCTTACAGTG 59.266 52.381 3.00 11.07 36.40 3.66
209 210 1.734465 CACCAGCTTAGCTTACAGTGC 59.266 52.381 3.00 0.00 36.40 4.40
210 211 1.339151 ACCAGCTTAGCTTACAGTGCC 60.339 52.381 3.00 0.00 36.40 5.01
211 212 1.002366 CAGCTTAGCTTACAGTGCCG 58.998 55.000 3.00 0.00 36.40 5.69
212 213 0.741221 AGCTTAGCTTACAGTGCCGC 60.741 55.000 0.00 0.00 33.89 6.53
213 214 1.706287 GCTTAGCTTACAGTGCCGCC 61.706 60.000 0.00 0.00 0.00 6.13
214 215 1.421410 CTTAGCTTACAGTGCCGCCG 61.421 60.000 0.00 0.00 0.00 6.46
215 216 2.845752 TTAGCTTACAGTGCCGCCGG 62.846 60.000 0.00 0.00 0.00 6.13
229 230 4.394712 CCGGCGGTTTCTGGCTCT 62.395 66.667 19.97 0.00 0.00 4.09
230 231 3.121030 CGGCGGTTTCTGGCTCTG 61.121 66.667 0.00 0.00 0.00 3.35
231 232 3.435186 GGCGGTTTCTGGCTCTGC 61.435 66.667 0.00 0.00 0.00 4.26
232 233 2.359230 GCGGTTTCTGGCTCTGCT 60.359 61.111 0.00 0.00 0.00 4.24
233 234 2.394563 GCGGTTTCTGGCTCTGCTC 61.395 63.158 0.00 0.00 0.00 4.26
234 235 2.097038 CGGTTTCTGGCTCTGCTCG 61.097 63.158 0.00 0.00 0.00 5.03
235 236 2.394563 GGTTTCTGGCTCTGCTCGC 61.395 63.158 0.00 0.00 0.00 5.03
236 237 1.375268 GTTTCTGGCTCTGCTCGCT 60.375 57.895 0.00 0.00 0.00 4.93
237 238 1.079543 TTTCTGGCTCTGCTCGCTC 60.080 57.895 0.00 0.00 0.00 5.03
238 239 1.539560 TTTCTGGCTCTGCTCGCTCT 61.540 55.000 0.00 0.00 0.00 4.09
239 240 2.202770 CTGGCTCTGCTCGCTCTG 60.203 66.667 0.00 0.00 0.00 3.35
240 241 3.719883 CTGGCTCTGCTCGCTCTGG 62.720 68.421 0.00 0.00 0.00 3.86
241 242 3.456365 GGCTCTGCTCGCTCTGGA 61.456 66.667 0.00 0.00 0.00 3.86
242 243 2.104729 GCTCTGCTCGCTCTGGAG 59.895 66.667 0.00 0.00 37.11 3.86
243 244 2.806929 CTCTGCTCGCTCTGGAGG 59.193 66.667 0.00 0.00 34.56 4.30
244 245 3.429080 CTCTGCTCGCTCTGGAGGC 62.429 68.421 0.00 0.00 34.56 4.70
272 273 3.502572 GGCATTGCCCTTCTCGAC 58.497 61.111 17.28 0.00 44.06 4.20
273 274 1.377202 GGCATTGCCCTTCTCGACA 60.377 57.895 17.28 0.00 44.06 4.35
274 275 1.648467 GGCATTGCCCTTCTCGACAC 61.648 60.000 17.28 0.00 44.06 3.67
275 276 1.970917 GCATTGCCCTTCTCGACACG 61.971 60.000 0.00 0.00 0.00 4.49
276 277 1.079127 ATTGCCCTTCTCGACACGG 60.079 57.895 0.00 0.00 0.00 4.94
277 278 3.876589 TTGCCCTTCTCGACACGGC 62.877 63.158 0.00 0.00 40.16 5.68
279 280 4.452733 CCCTTCTCGACACGGCCC 62.453 72.222 0.00 0.00 0.00 5.80
280 281 4.796231 CCTTCTCGACACGGCCCG 62.796 72.222 0.00 0.00 0.00 6.13
281 282 4.796231 CTTCTCGACACGGCCCGG 62.796 72.222 8.57 0.00 0.00 5.73
292 293 4.717313 GGCCCGGGGTGAACTGAC 62.717 72.222 25.28 0.66 0.00 3.51
293 294 3.637273 GCCCGGGGTGAACTGACT 61.637 66.667 25.28 0.00 0.00 3.41
294 295 2.663196 CCCGGGGTGAACTGACTC 59.337 66.667 14.71 0.00 0.00 3.36
295 296 2.663196 CCGGGGTGAACTGACTCC 59.337 66.667 0.00 0.00 32.43 3.85
296 297 2.214216 CCGGGGTGAACTGACTCCA 61.214 63.158 0.00 0.00 36.06 3.86
297 298 1.553690 CCGGGGTGAACTGACTCCAT 61.554 60.000 0.00 0.00 36.06 3.41
298 299 0.391661 CGGGGTGAACTGACTCCATG 60.392 60.000 0.00 0.00 36.06 3.66
299 300 0.035056 GGGGTGAACTGACTCCATGG 60.035 60.000 4.97 4.97 36.36 3.66
300 301 0.035056 GGGTGAACTGACTCCATGGG 60.035 60.000 13.02 5.22 0.00 4.00
301 302 0.035056 GGTGAACTGACTCCATGGGG 60.035 60.000 11.11 11.11 0.00 4.96
302 303 0.693049 GTGAACTGACTCCATGGGGT 59.307 55.000 19.98 19.98 34.93 4.95
303 304 1.073923 GTGAACTGACTCCATGGGGTT 59.926 52.381 20.95 12.39 34.93 4.11
304 305 1.351017 TGAACTGACTCCATGGGGTTC 59.649 52.381 20.95 19.52 35.20 3.62
305 306 0.698818 AACTGACTCCATGGGGTTCC 59.301 55.000 20.95 7.72 34.93 3.62
306 307 1.221840 CTGACTCCATGGGGTTCCG 59.778 63.158 20.95 6.60 35.24 4.30
307 308 1.537889 TGACTCCATGGGGTTCCGT 60.538 57.895 20.95 0.00 35.24 4.69
308 309 1.131303 TGACTCCATGGGGTTCCGTT 61.131 55.000 20.95 0.00 35.24 4.44
309 310 0.037734 GACTCCATGGGGTTCCGTTT 59.962 55.000 20.95 0.00 35.24 3.60
310 311 0.037734 ACTCCATGGGGTTCCGTTTC 59.962 55.000 12.96 0.00 35.24 2.78
311 312 1.003112 TCCATGGGGTTCCGTTTCG 60.003 57.895 13.02 0.00 35.24 3.46
312 313 1.302993 CCATGGGGTTCCGTTTCGT 60.303 57.895 2.85 0.00 35.24 3.85
313 314 1.303091 CCATGGGGTTCCGTTTCGTC 61.303 60.000 2.85 0.00 35.24 4.20
314 315 1.375013 ATGGGGTTCCGTTTCGTCG 60.375 57.895 0.00 0.00 35.24 5.12
315 316 2.029518 GGGGTTCCGTTTCGTCGT 59.970 61.111 0.00 0.00 0.00 4.34
316 317 2.023771 GGGGTTCCGTTTCGTCGTC 61.024 63.158 0.00 0.00 0.00 4.20
317 318 1.006922 GGGTTCCGTTTCGTCGTCT 60.007 57.895 0.00 0.00 0.00 4.18
318 319 0.598419 GGGTTCCGTTTCGTCGTCTT 60.598 55.000 0.00 0.00 0.00 3.01
319 320 0.780596 GGTTCCGTTTCGTCGTCTTC 59.219 55.000 0.00 0.00 0.00 2.87
320 321 1.480205 GTTCCGTTTCGTCGTCTTCA 58.520 50.000 0.00 0.00 0.00 3.02
321 322 1.450905 GTTCCGTTTCGTCGTCTTCAG 59.549 52.381 0.00 0.00 0.00 3.02
322 323 0.039798 TCCGTTTCGTCGTCTTCAGG 60.040 55.000 0.00 0.00 0.00 3.86
323 324 1.615107 CCGTTTCGTCGTCTTCAGGC 61.615 60.000 0.00 0.00 0.00 4.85
324 325 0.663568 CGTTTCGTCGTCTTCAGGCT 60.664 55.000 0.00 0.00 0.00 4.58
325 326 1.061485 GTTTCGTCGTCTTCAGGCTC 58.939 55.000 0.00 0.00 0.00 4.70
326 327 0.038526 TTTCGTCGTCTTCAGGCTCC 60.039 55.000 0.00 0.00 0.00 4.70
327 328 1.874345 TTCGTCGTCTTCAGGCTCCC 61.874 60.000 0.00 0.00 0.00 4.30
328 329 2.344203 CGTCGTCTTCAGGCTCCCT 61.344 63.158 0.00 0.00 0.00 4.20
329 330 1.878656 CGTCGTCTTCAGGCTCCCTT 61.879 60.000 0.00 0.00 0.00 3.95
330 331 0.108567 GTCGTCTTCAGGCTCCCTTC 60.109 60.000 0.00 0.00 0.00 3.46
331 332 0.251832 TCGTCTTCAGGCTCCCTTCT 60.252 55.000 0.00 0.00 0.00 2.85
332 333 0.610687 CGTCTTCAGGCTCCCTTCTT 59.389 55.000 0.00 0.00 0.00 2.52
333 334 1.674221 CGTCTTCAGGCTCCCTTCTTG 60.674 57.143 0.00 0.00 0.00 3.02
334 335 1.349357 GTCTTCAGGCTCCCTTCTTGT 59.651 52.381 0.00 0.00 0.00 3.16
335 336 1.349026 TCTTCAGGCTCCCTTCTTGTG 59.651 52.381 0.00 0.00 0.00 3.33
336 337 1.349026 CTTCAGGCTCCCTTCTTGTGA 59.651 52.381 0.00 0.00 0.00 3.58
337 338 0.979665 TCAGGCTCCCTTCTTGTGAG 59.020 55.000 0.00 0.00 0.00 3.51
338 339 0.979665 CAGGCTCCCTTCTTGTGAGA 59.020 55.000 0.00 0.00 0.00 3.27
339 340 0.980423 AGGCTCCCTTCTTGTGAGAC 59.020 55.000 0.00 0.00 34.21 3.36
340 341 0.390472 GGCTCCCTTCTTGTGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
341 342 1.016653 GCTCCCTTCTTGTGAGACGC 61.017 60.000 0.00 0.00 0.00 5.19
342 343 0.390472 CTCCCTTCTTGTGAGACGCC 60.390 60.000 0.00 0.00 0.00 5.68
343 344 0.832135 TCCCTTCTTGTGAGACGCCT 60.832 55.000 0.00 0.00 0.00 5.52
344 345 0.390472 CCCTTCTTGTGAGACGCCTC 60.390 60.000 0.00 0.00 39.86 4.70
345 346 0.734253 CCTTCTTGTGAGACGCCTCG 60.734 60.000 0.00 0.00 42.33 4.63
347 348 2.765250 TTCTTGTGAGACGCCTCGCC 62.765 60.000 9.90 0.00 46.57 5.54
348 349 3.288308 CTTGTGAGACGCCTCGCCT 62.288 63.158 9.90 0.00 46.57 5.52
349 350 3.573772 TTGTGAGACGCCTCGCCTG 62.574 63.158 9.90 0.00 46.57 4.85
350 351 4.803426 GTGAGACGCCTCGCCTGG 62.803 72.222 0.13 0.00 42.56 4.45
366 367 3.851128 GGGCACCGGACTAGCTCC 61.851 72.222 9.46 6.59 40.86 4.70
367 368 3.075005 GGCACCGGACTAGCTCCA 61.075 66.667 9.46 0.00 39.39 3.86
368 369 2.496817 GCACCGGACTAGCTCCAG 59.503 66.667 9.46 0.00 39.39 3.86
369 370 2.496817 CACCGGACTAGCTCCAGC 59.503 66.667 9.46 0.00 39.39 4.85
380 381 3.028916 GCTCCAGCGATCCTAGAGA 57.971 57.895 9.63 0.00 31.81 3.10
381 382 0.881118 GCTCCAGCGATCCTAGAGAG 59.119 60.000 9.63 6.06 31.81 3.20
382 383 1.544537 GCTCCAGCGATCCTAGAGAGA 60.545 57.143 9.63 0.00 31.81 3.10
383 384 2.426522 CTCCAGCGATCCTAGAGAGAG 58.573 57.143 0.00 0.00 31.81 3.20
384 385 2.038426 CTCCAGCGATCCTAGAGAGAGA 59.962 54.545 0.00 0.00 31.81 3.10
385 386 2.038426 TCCAGCGATCCTAGAGAGAGAG 59.962 54.545 0.00 0.00 0.00 3.20
386 387 2.038426 CCAGCGATCCTAGAGAGAGAGA 59.962 54.545 0.00 0.00 0.00 3.10
387 388 3.329386 CAGCGATCCTAGAGAGAGAGAG 58.671 54.545 0.00 0.00 0.00 3.20
388 389 3.006859 CAGCGATCCTAGAGAGAGAGAGA 59.993 52.174 0.00 0.00 0.00 3.10
389 390 3.259374 AGCGATCCTAGAGAGAGAGAGAG 59.741 52.174 0.00 0.00 0.00 3.20
390 391 3.258372 GCGATCCTAGAGAGAGAGAGAGA 59.742 52.174 0.00 0.00 0.00 3.10
391 392 4.619394 GCGATCCTAGAGAGAGAGAGAGAG 60.619 54.167 0.00 0.00 0.00 3.20
392 393 4.767409 CGATCCTAGAGAGAGAGAGAGAGA 59.233 50.000 0.00 0.00 0.00 3.10
393 394 5.105957 CGATCCTAGAGAGAGAGAGAGAGAG 60.106 52.000 0.00 0.00 0.00 3.20
394 395 5.403558 TCCTAGAGAGAGAGAGAGAGAGA 57.596 47.826 0.00 0.00 0.00 3.10
395 396 5.389520 TCCTAGAGAGAGAGAGAGAGAGAG 58.610 50.000 0.00 0.00 0.00 3.20
396 397 5.134509 TCCTAGAGAGAGAGAGAGAGAGAGA 59.865 48.000 0.00 0.00 0.00 3.10
397 398 5.476599 CCTAGAGAGAGAGAGAGAGAGAGAG 59.523 52.000 0.00 0.00 0.00 3.20
398 399 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
399 400 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
400 401 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
401 402 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
402 403 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
403 404 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
404 405 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
405 406 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
406 407 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
407 408 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
408 409 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
409 410 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
410 411 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
411 412 3.312890 AGAGAGAGAGAGAGAGAGAGGG 58.687 54.545 0.00 0.00 0.00 4.30
412 413 2.370189 GAGAGAGAGAGAGAGAGAGGGG 59.630 59.091 0.00 0.00 0.00 4.79
413 414 0.846693 AGAGAGAGAGAGAGAGGGGC 59.153 60.000 0.00 0.00 0.00 5.80
414 415 0.535102 GAGAGAGAGAGAGAGGGGCG 60.535 65.000 0.00 0.00 0.00 6.13
415 416 1.226262 GAGAGAGAGAGAGGGGCGT 59.774 63.158 0.00 0.00 0.00 5.68
416 417 0.395173 GAGAGAGAGAGAGGGGCGTT 60.395 60.000 0.00 0.00 0.00 4.84
417 418 0.395173 AGAGAGAGAGAGGGGCGTTC 60.395 60.000 0.00 0.00 0.00 3.95
418 419 1.720694 GAGAGAGAGAGGGGCGTTCG 61.721 65.000 0.00 0.00 0.00 3.95
419 420 2.035940 AGAGAGAGGGGCGTTCGT 59.964 61.111 0.00 0.00 0.00 3.85
420 421 2.182030 GAGAGAGGGGCGTTCGTG 59.818 66.667 0.00 0.00 0.00 4.35
421 422 3.991536 GAGAGAGGGGCGTTCGTGC 62.992 68.421 0.00 0.00 0.00 5.34
422 423 4.070552 GAGAGGGGCGTTCGTGCT 62.071 66.667 0.00 0.00 34.52 4.40
423 424 2.678934 AGAGGGGCGTTCGTGCTA 60.679 61.111 0.00 0.00 34.52 3.49
424 425 2.508663 GAGGGGCGTTCGTGCTAC 60.509 66.667 0.00 0.00 34.52 3.58
425 426 4.078516 AGGGGCGTTCGTGCTACC 62.079 66.667 0.00 0.00 34.52 3.18
428 429 4.382320 GGCGTTCGTGCTACCCCA 62.382 66.667 0.00 0.00 34.52 4.96
429 430 3.116531 GCGTTCGTGCTACCCCAC 61.117 66.667 0.00 0.00 0.00 4.61
430 431 2.433664 CGTTCGTGCTACCCCACC 60.434 66.667 0.00 0.00 32.10 4.61
431 432 2.046604 GTTCGTGCTACCCCACCC 60.047 66.667 0.00 0.00 32.10 4.61
432 433 3.324108 TTCGTGCTACCCCACCCC 61.324 66.667 0.00 0.00 32.10 4.95
433 434 4.642488 TCGTGCTACCCCACCCCA 62.642 66.667 0.00 0.00 32.10 4.96
434 435 4.404098 CGTGCTACCCCACCCCAC 62.404 72.222 0.00 0.00 32.10 4.61
435 436 4.404098 GTGCTACCCCACCCCACG 62.404 72.222 0.00 0.00 0.00 4.94
463 464 4.069232 CTTGGCGAGCTCACGGGA 62.069 66.667 15.40 0.00 0.00 5.14
464 465 4.373116 TTGGCGAGCTCACGGGAC 62.373 66.667 15.40 0.00 0.00 4.46
499 500 2.514592 CATTCCGCCGAGCACCAT 60.515 61.111 0.00 0.00 0.00 3.55
500 501 2.203070 ATTCCGCCGAGCACCATC 60.203 61.111 0.00 0.00 0.00 3.51
501 502 2.735772 ATTCCGCCGAGCACCATCT 61.736 57.895 0.00 0.00 0.00 2.90
502 503 1.399744 ATTCCGCCGAGCACCATCTA 61.400 55.000 0.00 0.00 0.00 1.98
503 504 2.279517 CCGCCGAGCACCATCTAC 60.280 66.667 0.00 0.00 0.00 2.59
504 505 2.494445 CGCCGAGCACCATCTACA 59.506 61.111 0.00 0.00 0.00 2.74
507 516 1.432270 GCCGAGCACCATCTACAAGC 61.432 60.000 0.00 0.00 0.00 4.01
675 698 3.432186 GCCCGAGCTCTCTCTCTC 58.568 66.667 12.85 0.00 37.19 3.20
676 699 1.152963 GCCCGAGCTCTCTCTCTCT 60.153 63.158 12.85 0.00 37.19 3.10
677 700 0.107831 GCCCGAGCTCTCTCTCTCTA 59.892 60.000 12.85 0.00 37.19 2.43
678 701 1.878102 GCCCGAGCTCTCTCTCTCTAG 60.878 61.905 12.85 0.00 37.19 2.43
679 702 1.512926 CCGAGCTCTCTCTCTCTAGC 58.487 60.000 12.85 0.00 37.19 3.42
681 704 2.485479 CCGAGCTCTCTCTCTCTAGCTT 60.485 54.545 12.85 0.00 45.04 3.74
682 705 2.545526 CGAGCTCTCTCTCTCTAGCTTG 59.454 54.545 12.85 0.00 45.04 4.01
685 715 2.033801 GCTCTCTCTCTCTAGCTTGCTG 59.966 54.545 5.26 0.00 32.18 4.41
701 731 1.144716 CTGCTAGCTCGCCATTCCA 59.855 57.895 17.23 0.00 0.00 3.53
727 766 3.644953 TTTTTGGGGGCCTTCTTGT 57.355 47.368 0.84 0.00 0.00 3.16
728 767 1.886422 TTTTTGGGGGCCTTCTTGTT 58.114 45.000 0.84 0.00 0.00 2.83
729 768 1.419381 TTTTGGGGGCCTTCTTGTTC 58.581 50.000 0.84 0.00 0.00 3.18
730 769 0.471022 TTTGGGGGCCTTCTTGTTCC 60.471 55.000 0.84 0.00 0.00 3.62
734 773 1.465172 GGGCCTTCTTGTTCCCCTT 59.535 57.895 0.84 0.00 32.60 3.95
735 774 0.178932 GGGCCTTCTTGTTCCCCTTT 60.179 55.000 0.84 0.00 32.60 3.11
737 776 1.344438 GGCCTTCTTGTTCCCCTTTTG 59.656 52.381 0.00 0.00 0.00 2.44
739 778 1.344438 CCTTCTTGTTCCCCTTTTGCC 59.656 52.381 0.00 0.00 0.00 4.52
740 779 2.319844 CTTCTTGTTCCCCTTTTGCCT 58.680 47.619 0.00 0.00 0.00 4.75
741 780 3.496331 CTTCTTGTTCCCCTTTTGCCTA 58.504 45.455 0.00 0.00 0.00 3.93
744 783 3.117284 TCTTGTTCCCCTTTTGCCTACTT 60.117 43.478 0.00 0.00 0.00 2.24
745 784 4.105057 TCTTGTTCCCCTTTTGCCTACTTA 59.895 41.667 0.00 0.00 0.00 2.24
746 785 4.456662 TGTTCCCCTTTTGCCTACTTAA 57.543 40.909 0.00 0.00 0.00 1.85
747 786 5.005628 TGTTCCCCTTTTGCCTACTTAAT 57.994 39.130 0.00 0.00 0.00 1.40
759 798 3.471680 CCTACTTAATCCTGCCTGCTTC 58.528 50.000 0.00 0.00 0.00 3.86
779 818 0.317603 CTTGCTTGCTCACACACTGC 60.318 55.000 0.00 0.00 0.00 4.40
780 819 1.031029 TTGCTTGCTCACACACTGCA 61.031 50.000 0.00 0.00 34.69 4.41
781 820 1.009222 GCTTGCTCACACACTGCAC 60.009 57.895 0.00 0.00 36.37 4.57
782 821 1.442526 GCTTGCTCACACACTGCACT 61.443 55.000 0.00 0.00 36.37 4.40
783 822 0.306840 CTTGCTCACACACTGCACTG 59.693 55.000 0.00 0.00 36.37 3.66
785 824 0.392863 TGCTCACACACTGCACTGTT 60.393 50.000 0.00 0.00 0.00 3.16
791 830 3.133691 CACACACTGCACTGTTACTGAT 58.866 45.455 0.00 0.00 0.00 2.90
793 832 4.931601 CACACACTGCACTGTTACTGATAT 59.068 41.667 0.00 0.00 0.00 1.63
814 853 1.666054 CATCCTCTGCTTCTCTTGCC 58.334 55.000 0.00 0.00 0.00 4.52
816 855 1.059098 TCCTCTGCTTCTCTTGCCAA 58.941 50.000 0.00 0.00 0.00 4.52
817 856 1.632409 TCCTCTGCTTCTCTTGCCAAT 59.368 47.619 0.00 0.00 0.00 3.16
818 857 1.743958 CCTCTGCTTCTCTTGCCAATG 59.256 52.381 0.00 0.00 0.00 2.82
819 858 1.743958 CTCTGCTTCTCTTGCCAATGG 59.256 52.381 0.00 0.00 0.00 3.16
856 895 1.074752 GCACTCTGCTTTCCGAGAAG 58.925 55.000 0.00 0.00 40.96 2.85
872 911 3.283303 AGCTCTCGCTGACTGACC 58.717 61.111 0.00 0.00 46.86 4.02
873 912 1.604879 AGCTCTCGCTGACTGACCA 60.605 57.895 0.00 0.00 46.86 4.02
874 913 0.969917 AGCTCTCGCTGACTGACCAT 60.970 55.000 0.00 0.00 46.86 3.55
875 914 0.527385 GCTCTCGCTGACTGACCATC 60.527 60.000 0.00 0.00 0.00 3.51
910 952 2.987125 GGTTAAGCCGCTCCCTCA 59.013 61.111 0.00 0.00 0.00 3.86
911 953 1.153349 GGTTAAGCCGCTCCCTCAG 60.153 63.158 0.00 0.00 0.00 3.35
920 962 3.805267 CTCCCTCAGCATTCGTGC 58.195 61.111 0.00 0.00 0.00 5.34
922 964 0.463295 CTCCCTCAGCATTCGTGCAT 60.463 55.000 3.03 0.00 37.25 3.96
925 967 1.640069 CTCAGCATTCGTGCATCCG 59.360 57.895 3.03 0.00 37.25 4.18
926 968 2.023741 CAGCATTCGTGCATCCGC 59.976 61.111 3.03 0.00 37.25 5.54
927 969 3.204827 AGCATTCGTGCATCCGCC 61.205 61.111 3.03 0.00 37.32 6.13
928 970 3.204827 GCATTCGTGCATCCGCCT 61.205 61.111 0.00 0.00 37.32 5.52
929 971 2.711311 CATTCGTGCATCCGCCTG 59.289 61.111 0.00 0.00 37.32 4.85
938 981 4.521062 ATCCGCCTGCAGCTCGAC 62.521 66.667 22.63 4.05 40.39 4.20
944 987 2.202544 CTGCAGCTCGACCTCGAC 60.203 66.667 0.00 0.00 44.22 4.20
950 993 2.401592 CTCGACCTCGACTCAGCG 59.598 66.667 0.00 0.00 44.22 5.18
970 1013 1.801913 CGGTTCTTCAGCCTCGTCG 60.802 63.158 0.00 0.00 0.00 5.12
971 1014 1.446272 GGTTCTTCAGCCTCGTCGG 60.446 63.158 0.00 0.00 0.00 4.79
987 1030 0.035439 TCGGCCCTCTGTTGGATTTC 60.035 55.000 0.00 0.00 0.00 2.17
990 1033 1.534729 GCCCTCTGTTGGATTTCGTT 58.465 50.000 0.00 0.00 0.00 3.85
1044 1092 3.349006 CAGCAGCTGCCGACGTTT 61.349 61.111 34.39 12.11 43.38 3.60
1203 1251 2.622452 CCTCGTCTACTACTTCCCCCAA 60.622 54.545 0.00 0.00 0.00 4.12
1237 1285 1.625818 AGGTGCGTCTCAATCCTTCTT 59.374 47.619 0.00 0.00 0.00 2.52
1240 1288 2.926838 GTGCGTCTCAATCCTTCTTCTC 59.073 50.000 0.00 0.00 0.00 2.87
1244 1292 3.516615 GTCTCAATCCTTCTTCTCCACG 58.483 50.000 0.00 0.00 0.00 4.94
1285 1338 6.634805 TCATCTGGTTTAGATCACTTGACTC 58.365 40.000 0.00 0.00 44.34 3.36
1286 1339 6.211384 TCATCTGGTTTAGATCACTTGACTCA 59.789 38.462 0.00 0.00 44.34 3.41
1289 1342 7.099764 TCTGGTTTAGATCACTTGACTCAATC 58.900 38.462 0.00 0.00 0.00 2.67
1325 1378 4.218312 AGTTTTTCTTGATCTGGCAGGTT 58.782 39.130 15.73 2.24 0.00 3.50
1425 1478 3.181494 CCACAACATCACCATGCATGTAG 60.181 47.826 24.58 16.23 33.65 2.74
1456 1509 3.496870 GGTTCATCTTCAGGTTCAGGTGT 60.497 47.826 0.00 0.00 0.00 4.16
1457 1510 4.262894 GGTTCATCTTCAGGTTCAGGTGTA 60.263 45.833 0.00 0.00 0.00 2.90
1458 1511 5.305585 GTTCATCTTCAGGTTCAGGTGTAA 58.694 41.667 0.00 0.00 0.00 2.41
1475 1528 3.043418 TGTAATAGGGGTTAGTGGCCTC 58.957 50.000 3.32 0.00 0.00 4.70
1484 1537 3.287222 GGTTAGTGGCCTCATGCATTAA 58.713 45.455 3.32 0.00 43.89 1.40
1487 1540 1.005805 AGTGGCCTCATGCATTAACCA 59.994 47.619 3.32 0.00 43.89 3.67
1488 1541 1.134946 GTGGCCTCATGCATTAACCAC 59.865 52.381 17.44 17.44 43.89 4.16
1492 1545 3.316308 GGCCTCATGCATTAACCACTTAG 59.684 47.826 0.00 0.00 43.89 2.18
1509 1563 2.353357 TAGCCCTGATGAATGCTTGG 57.647 50.000 0.00 0.00 35.34 3.61
1510 1564 0.396695 AGCCCTGATGAATGCTTGGG 60.397 55.000 0.00 0.00 37.76 4.12
1518 1572 3.507233 TGATGAATGCTTGGGTTCTTGTC 59.493 43.478 0.00 0.00 0.00 3.18
1521 1575 3.569701 TGAATGCTTGGGTTCTTGTCTTC 59.430 43.478 0.00 0.00 0.00 2.87
1650 1711 6.135290 TGCTGAACATGCTGTATTTTATCC 57.865 37.500 0.00 0.00 0.00 2.59
1872 1934 1.742761 CTGTTCCCACAGCTGGTATG 58.257 55.000 19.93 7.28 44.16 2.39
1898 1962 5.183713 CAGCCTTCTGTCCACATTTTCATTA 59.816 40.000 0.00 0.00 35.61 1.90
1899 1963 5.954150 AGCCTTCTGTCCACATTTTCATTAT 59.046 36.000 0.00 0.00 0.00 1.28
1900 1964 7.067372 CAGCCTTCTGTCCACATTTTCATTATA 59.933 37.037 0.00 0.00 35.61 0.98
1930 1995 3.498774 ACTCTTTGTGAATGCCTCAGT 57.501 42.857 0.00 0.00 33.60 3.41
1954 2019 5.132502 TCATGCATAGGTTATGTCTTTGGG 58.867 41.667 0.00 0.00 38.43 4.12
2282 2633 1.496001 TGGACCCAGCTTGCATGATAT 59.504 47.619 3.33 0.00 0.00 1.63
2284 2635 3.331591 TGGACCCAGCTTGCATGATATAT 59.668 43.478 3.33 0.00 0.00 0.86
2285 2636 4.535692 TGGACCCAGCTTGCATGATATATA 59.464 41.667 3.33 0.00 0.00 0.86
2286 2637 4.878397 GGACCCAGCTTGCATGATATATAC 59.122 45.833 3.33 0.00 0.00 1.47
2287 2638 5.338708 GGACCCAGCTTGCATGATATATACT 60.339 44.000 3.33 0.00 0.00 2.12
2288 2639 6.127054 GGACCCAGCTTGCATGATATATACTA 60.127 42.308 3.33 0.00 0.00 1.82
2289 2640 6.644347 ACCCAGCTTGCATGATATATACTAC 58.356 40.000 3.33 0.00 0.00 2.73
2291 2642 7.619698 ACCCAGCTTGCATGATATATACTACTA 59.380 37.037 3.33 0.00 0.00 1.82
2292 2643 7.923344 CCCAGCTTGCATGATATATACTACTAC 59.077 40.741 3.33 0.00 0.00 2.73
2293 2644 8.690884 CCAGCTTGCATGATATATACTACTACT 58.309 37.037 3.33 0.00 0.00 2.57
2294 2645 9.513727 CAGCTTGCATGATATATACTACTACTG 57.486 37.037 3.33 0.00 0.00 2.74
2316 2667 4.938832 TGTGTATGTTTGGGATCTTAACCG 59.061 41.667 0.00 0.00 0.00 4.44
2367 2719 7.923414 AAAGGTTCAGACTATGGTATTTGTC 57.077 36.000 0.00 0.00 0.00 3.18
2377 2729 8.037758 AGACTATGGTATTTGTCTGAACTCTTG 58.962 37.037 0.00 0.00 38.22 3.02
2378 2730 7.106239 ACTATGGTATTTGTCTGAACTCTTGG 58.894 38.462 0.00 0.00 0.00 3.61
2430 2782 4.346730 TGGAGACAATTCCTGCATTCAAT 58.653 39.130 0.00 0.00 38.12 2.57
2435 2787 2.589798 ATTCCTGCATTCAATTGCCG 57.410 45.000 0.00 0.00 42.06 5.69
2449 2801 4.141287 CAATTGCCGTCATATTTAGGGGA 58.859 43.478 0.00 0.00 0.00 4.81
2473 2825 7.331193 GGATACAAAGTTGGTTACAGTGTAGAG 59.669 40.741 2.68 0.00 34.05 2.43
2664 3025 2.064573 TGCTATGTGACACAGACACG 57.935 50.000 14.66 0.00 40.61 4.49
2677 3058 2.418628 ACAGACACGTGGAAACAACTTG 59.581 45.455 21.57 6.69 46.06 3.16
2719 3100 4.452114 CACTCGGTGAATTTGTGAGAATCA 59.548 41.667 0.00 0.00 38.27 2.57
2820 3201 3.790744 GCAAACGGCATTGTCATCA 57.209 47.368 2.51 0.00 43.97 3.07
2993 3376 9.806448 ACTGGTGGCATATTTAACATATATTCA 57.194 29.630 0.00 0.00 0.00 2.57
3033 3416 3.039202 GAGCCCATCGCCGTTTGTG 62.039 63.158 0.00 0.00 38.78 3.33
3042 3425 0.881159 CGCCGTTTGTGGTTCCTGTA 60.881 55.000 0.00 0.00 0.00 2.74
3134 3517 1.905922 GAGTCAAGCAAGCGCAGGTC 61.906 60.000 11.47 0.00 42.27 3.85
3135 3518 2.669569 TCAAGCAAGCGCAGGTCC 60.670 61.111 11.47 0.00 42.27 4.46
3160 3543 6.916932 CGCCCACTAACTAGAACTAAATACTC 59.083 42.308 0.00 0.00 0.00 2.59
3254 3637 7.555914 TGCAACTGATGTTAGAAGGCAATATAA 59.444 33.333 0.00 0.00 34.60 0.98
3304 3687 5.812127 ACTTGTTCTGCAAATCTTTTTCACC 59.188 36.000 0.00 0.00 36.53 4.02
3340 3723 5.999205 AAAATGACCATATCAAAGCCACA 57.001 34.783 0.00 0.00 41.93 4.17
3350 3733 7.663081 ACCATATCAAAGCCACATCTACAATAG 59.337 37.037 0.00 0.00 0.00 1.73
3356 3739 5.016051 AGCCACATCTACAATAGTGAGTG 57.984 43.478 0.00 0.00 33.99 3.51
3566 3951 1.260544 GTGCCTTGCTTTCCTTCCAT 58.739 50.000 0.00 0.00 0.00 3.41
3577 3962 6.512297 TGCTTTCCTTCCATAAAACTTGAAC 58.488 36.000 0.00 0.00 0.00 3.18
3596 3985 3.845781 ACGAACCTGCCTATCATCATT 57.154 42.857 0.00 0.00 0.00 2.57
3598 3987 4.130118 ACGAACCTGCCTATCATCATTTC 58.870 43.478 0.00 0.00 0.00 2.17
3611 4000 5.762179 TCATCATTTCGCCCTCCTAATAT 57.238 39.130 0.00 0.00 0.00 1.28
3811 4200 3.705811 AGTACCTGGGGTAGTGACC 57.294 57.895 0.00 0.00 40.01 4.02
3831 4220 5.106712 TGACCGAGTCTGCAAATATTTGTTC 60.107 40.000 25.15 12.89 35.70 3.18
4201 4590 1.269517 CCTAAGATGCAGAGAGGCGAC 60.270 57.143 0.00 0.00 36.28 5.19
4222 4611 4.712476 ACTCAGAAAGCTGTGAAGTTCAT 58.288 39.130 9.18 0.00 42.84 2.57
4366 4755 0.610687 CTCGGAGGAGCAAGAAAGGT 59.389 55.000 0.00 0.00 32.61 3.50
4372 4761 3.013219 GAGGAGCAAGAAAGGTTCATCC 58.987 50.000 0.00 0.00 0.00 3.51
4419 4808 1.134220 ACTTTCTTCGGCACCTTCACA 60.134 47.619 0.00 0.00 0.00 3.58
4437 4826 2.485426 CACAGATTTGCGATGACCAACT 59.515 45.455 0.00 0.00 0.00 3.16
4460 4849 4.821260 TGCATGTTTCAGAAGCAGAACTAA 59.179 37.500 5.86 0.00 0.00 2.24
4478 4867 6.601613 AGAACTAATCAGTTGTGACACCAAAA 59.398 34.615 2.45 0.00 45.18 2.44
4573 4962 2.807967 TCAGCAGGTCGAACAAAATGAG 59.192 45.455 1.87 0.00 0.00 2.90
4771 5167 7.160049 ACATCTTCAGTCCATCTGCTAATATG 58.840 38.462 0.00 0.00 43.32 1.78
4773 5169 4.277515 TCAGTCCATCTGCTAATATGGC 57.722 45.455 0.00 0.00 42.08 4.40
4798 5194 9.982651 GCTTCCACAATAAATACTGATACTCTA 57.017 33.333 0.00 0.00 0.00 2.43
4837 5233 1.548357 GCCTCTCAGACTGCTTCCCA 61.548 60.000 0.00 0.00 0.00 4.37
4856 5252 4.941263 TCCCAAATTCCATACAAGACTTCG 59.059 41.667 0.00 0.00 0.00 3.79
5068 5464 1.142097 GCAGACTACCGAGGGCTTC 59.858 63.158 0.00 0.00 0.00 3.86
5086 5482 3.118261 GCTTCAATCTGGGGATGTACTCA 60.118 47.826 0.00 0.00 31.75 3.41
5199 5595 1.816835 AGAGTACAGCATCGACCGAAA 59.183 47.619 0.00 0.00 0.00 3.46
5253 5649 9.909644 GACATATACAAAGGTATGGTACTACAG 57.090 37.037 0.00 0.00 40.40 2.74
5258 5654 4.737855 AAGGTATGGTACTACAGCACTG 57.262 45.455 0.00 0.00 37.50 3.66
5326 5722 7.716612 AGTAACTTCAAACTTTTGCTTATGCT 58.283 30.769 1.96 0.00 40.48 3.79
5327 5723 8.846211 AGTAACTTCAAACTTTTGCTTATGCTA 58.154 29.630 1.96 0.00 40.48 3.49
5328 5724 9.458374 GTAACTTCAAACTTTTGCTTATGCTAA 57.542 29.630 1.96 0.00 40.48 3.09
5439 5835 4.357699 CTGAGATCAGCCATCGCC 57.642 61.111 0.00 0.00 37.15 5.54
5466 5862 0.772124 TTGGACTCCAGGGGAAGCTT 60.772 55.000 0.00 0.00 33.81 3.74
5496 5892 2.232452 TGCTAGTTCAGACTGGAAGCTC 59.768 50.000 8.56 0.00 36.43 4.09
5535 5931 0.670546 ACGATGTGCTTCTTGTCGGG 60.671 55.000 0.00 0.00 36.68 5.14
5538 5934 0.620556 ATGTGCTTCTTGTCGGGGAT 59.379 50.000 0.00 0.00 0.00 3.85
5583 5987 4.443394 GCAGCTCTGTTTCTTGACAAAATG 59.557 41.667 0.00 0.00 0.00 2.32
5620 6120 8.638873 CATCCATGTCCTAATGTAGTACAGTTA 58.361 37.037 8.76 6.75 27.86 2.24
5651 6151 3.316588 TCTTCACTCACTCACTCACTCAC 59.683 47.826 0.00 0.00 0.00 3.51
5652 6152 2.937519 TCACTCACTCACTCACTCACT 58.062 47.619 0.00 0.00 0.00 3.41
5653 6153 2.881513 TCACTCACTCACTCACTCACTC 59.118 50.000 0.00 0.00 0.00 3.51
5654 6154 2.620585 CACTCACTCACTCACTCACTCA 59.379 50.000 0.00 0.00 0.00 3.41
5661 6161 1.683385 CACTCACTCACTCACTGACCA 59.317 52.381 0.00 0.00 0.00 4.02
5724 6224 4.586618 CGATGCATCCGGATCCTC 57.413 61.111 20.87 10.44 36.67 3.71
5742 6242 2.561419 CCTCTCACCTTCGGAAGTACAA 59.439 50.000 16.07 0.00 0.00 2.41
5804 6304 0.254178 CAAGCAGACCAGTAGGCCAT 59.746 55.000 5.01 0.00 39.06 4.40
5805 6305 0.995024 AAGCAGACCAGTAGGCCATT 59.005 50.000 5.01 0.00 39.06 3.16
5810 6310 1.985159 AGACCAGTAGGCCATTTCACA 59.015 47.619 5.01 0.00 39.06 3.58
5823 6323 3.200483 CATTTCACAGATCAGGATGCGA 58.800 45.455 0.00 0.00 34.76 5.10
5827 6327 0.179089 ACAGATCAGGATGCGACTGC 60.179 55.000 0.00 0.00 43.20 4.40
5887 6388 2.483876 TGCTGTTCTGAACACAGTAGC 58.516 47.619 18.69 18.89 43.21 3.58
5888 6389 2.158971 TGCTGTTCTGAACACAGTAGCA 60.159 45.455 22.57 22.57 43.21 3.49
5918 6419 6.431234 CCTTAGTTGACTGTAGGCTGATTTTT 59.569 38.462 0.00 0.00 0.00 1.94
5924 6425 3.997021 ACTGTAGGCTGATTTTTCTGACG 59.003 43.478 0.00 0.00 0.00 4.35
5933 6434 5.795441 GCTGATTTTTCTGACGGTGTATTTC 59.205 40.000 0.00 0.00 0.00 2.17
6030 6537 3.902261 TTGCTGTGTGATTGCTACTTG 57.098 42.857 0.00 0.00 0.00 3.16
6032 6539 1.464687 GCTGTGTGATTGCTACTTGCG 60.465 52.381 0.00 0.00 46.63 4.85
6052 6559 1.273048 GGTGCTTGTTTGCCATGATGA 59.727 47.619 0.00 0.00 0.00 2.92
6058 6565 3.306917 TGTTTGCCATGATGAGCTTTG 57.693 42.857 0.00 0.00 0.00 2.77
6060 6567 3.248266 GTTTGCCATGATGAGCTTTGTC 58.752 45.455 0.00 0.00 0.00 3.18
6084 6591 2.233431 GAGAGCCTGATGTCTCAACACT 59.767 50.000 0.00 0.00 39.30 3.55
6099 6606 8.635328 TGTCTCAACACTAGTGTAAATGTTAGA 58.365 33.333 28.13 17.86 44.13 2.10
6102 6609 7.438564 TCAACACTAGTGTAAATGTTAGAGCA 58.561 34.615 28.13 3.54 44.13 4.26
6111 6618 7.119846 AGTGTAAATGTTAGAGCAGTTGGATTC 59.880 37.037 0.00 0.00 0.00 2.52
6112 6619 5.551760 AAATGTTAGAGCAGTTGGATTCG 57.448 39.130 0.00 0.00 0.00 3.34
6120 6627 2.693074 AGCAGTTGGATTCGGTTTTGTT 59.307 40.909 0.00 0.00 0.00 2.83
6121 6628 3.886505 AGCAGTTGGATTCGGTTTTGTTA 59.113 39.130 0.00 0.00 0.00 2.41
6125 6632 5.457473 CAGTTGGATTCGGTTTTGTTACAAC 59.543 40.000 0.00 0.00 36.77 3.32
6127 6634 5.838531 TGGATTCGGTTTTGTTACAACTT 57.161 34.783 0.00 0.00 0.00 2.66
6189 6859 1.205417 CTTGGTTGGCAATGGTGGATC 59.795 52.381 1.92 0.00 0.00 3.36
6261 6993 2.545946 GGATCTGGCGCTACATTCTTTC 59.454 50.000 7.64 0.00 0.00 2.62
6263 6995 2.893637 TCTGGCGCTACATTCTTTCTC 58.106 47.619 7.64 0.00 0.00 2.87
6288 7020 1.124297 CCTCATGTGTCGTTTTCGTCG 59.876 52.381 0.00 0.00 44.46 5.12
6294 7026 2.119457 GTGTCGTTTTCGTCGGTACTT 58.881 47.619 0.00 0.00 44.46 2.24
6295 7027 2.151924 GTGTCGTTTTCGTCGGTACTTC 59.848 50.000 0.00 0.00 44.46 3.01
6298 7030 1.981533 CGTTTTCGTCGGTACTTCCTC 59.018 52.381 0.00 0.00 38.65 3.71
6302 7034 0.606401 TCGTCGGTACTTCCTCCGTT 60.606 55.000 3.64 0.00 45.88 4.44
6311 7043 5.354767 GGTACTTCCTCCGTTCGAAAATAT 58.645 41.667 0.00 0.00 0.00 1.28
6346 7078 7.915293 AATGGATGTATCTAGACGTAGAGAG 57.085 40.000 0.00 0.00 38.73 3.20
6411 7143 4.275936 CAGACAGTTTAAGGTTGAGGTTGG 59.724 45.833 0.00 0.00 0.00 3.77
6453 7185 2.224646 TGCTATAATAATGGGCACGGCA 60.225 45.455 0.00 0.00 0.00 5.69
6456 7188 2.428544 TAATAATGGGCACGGCAACT 57.571 45.000 0.00 0.00 0.00 3.16
6509 7265 2.035237 AAACCGACCCAAGCGTCTCA 62.035 55.000 0.00 0.00 0.00 3.27
6552 7312 2.264480 CGACGCAAGATGGGGACA 59.736 61.111 0.00 0.00 44.64 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.518302 GAGAAGAAGACCCCCGAGC 59.482 63.158 0.00 0.00 0.00 5.03
1 2 0.324830 AGGAGAAGAAGACCCCCGAG 60.325 60.000 0.00 0.00 0.00 4.63
2 3 0.116541 AAGGAGAAGAAGACCCCCGA 59.883 55.000 0.00 0.00 0.00 5.14
3 4 0.537653 GAAGGAGAAGAAGACCCCCG 59.462 60.000 0.00 0.00 0.00 5.73
4 5 1.657804 TGAAGGAGAAGAAGACCCCC 58.342 55.000 0.00 0.00 0.00 5.40
5 6 2.171659 GGATGAAGGAGAAGAAGACCCC 59.828 54.545 0.00 0.00 0.00 4.95
6 7 2.171659 GGGATGAAGGAGAAGAAGACCC 59.828 54.545 0.00 0.00 0.00 4.46
8 9 2.159028 CGGGGATGAAGGAGAAGAAGAC 60.159 54.545 0.00 0.00 0.00 3.01
9 10 2.111384 CGGGGATGAAGGAGAAGAAGA 58.889 52.381 0.00 0.00 0.00 2.87
10 11 1.139853 CCGGGGATGAAGGAGAAGAAG 59.860 57.143 0.00 0.00 0.00 2.85
11 12 1.204146 CCGGGGATGAAGGAGAAGAA 58.796 55.000 0.00 0.00 0.00 2.52
12 13 0.338467 TCCGGGGATGAAGGAGAAGA 59.662 55.000 0.00 0.00 0.00 2.87
13 14 2.916355 TCCGGGGATGAAGGAGAAG 58.084 57.895 0.00 0.00 0.00 2.85
17 18 0.031111 ATGACTCCGGGGATGAAGGA 60.031 55.000 9.33 0.00 0.00 3.36
18 19 0.839946 AATGACTCCGGGGATGAAGG 59.160 55.000 9.33 0.00 0.00 3.46
19 20 1.959042 CAATGACTCCGGGGATGAAG 58.041 55.000 9.33 0.00 0.00 3.02
20 21 0.107214 GCAATGACTCCGGGGATGAA 60.107 55.000 9.33 0.00 0.00 2.57
21 22 0.982852 AGCAATGACTCCGGGGATGA 60.983 55.000 9.33 0.00 0.00 2.92
22 23 0.816825 CAGCAATGACTCCGGGGATG 60.817 60.000 9.33 2.13 0.00 3.51
23 24 0.982852 TCAGCAATGACTCCGGGGAT 60.983 55.000 9.33 0.00 0.00 3.85
24 25 1.612146 TCAGCAATGACTCCGGGGA 60.612 57.895 9.33 0.00 0.00 4.81
25 26 1.153289 CTCAGCAATGACTCCGGGG 60.153 63.158 0.00 0.00 0.00 5.73
26 27 0.460987 GACTCAGCAATGACTCCGGG 60.461 60.000 0.00 0.00 0.00 5.73
27 28 0.803768 CGACTCAGCAATGACTCCGG 60.804 60.000 0.00 0.00 0.00 5.14
28 29 1.416813 GCGACTCAGCAATGACTCCG 61.417 60.000 0.00 0.00 37.05 4.63
29 30 1.086634 GGCGACTCAGCAATGACTCC 61.087 60.000 0.00 0.00 39.27 3.85
30 31 1.416813 CGGCGACTCAGCAATGACTC 61.417 60.000 0.00 0.00 39.27 3.36
31 32 1.446792 CGGCGACTCAGCAATGACT 60.447 57.895 0.00 0.00 39.27 3.41
32 33 3.084579 CGGCGACTCAGCAATGAC 58.915 61.111 0.00 0.00 39.27 3.06
33 34 2.815211 GCGGCGACTCAGCAATGA 60.815 61.111 12.98 0.00 39.27 2.57
34 35 2.806856 GAGCGGCGACTCAGCAATG 61.807 63.158 12.98 0.00 38.40 2.82
35 36 2.510238 GAGCGGCGACTCAGCAAT 60.510 61.111 12.98 0.00 38.40 3.56
36 37 4.742201 GGAGCGGCGACTCAGCAA 62.742 66.667 24.88 0.00 38.50 3.91
56 57 4.347453 CAACCTTGTGCGGCAGGC 62.347 66.667 1.18 0.00 43.96 4.85
57 58 4.347453 GCAACCTTGTGCGGCAGG 62.347 66.667 1.18 3.70 34.21 4.85
63 64 1.076332 CGTACCTAGCAACCTTGTGC 58.924 55.000 0.00 0.00 45.28 4.57
64 65 2.450609 ACGTACCTAGCAACCTTGTG 57.549 50.000 0.00 0.00 0.00 3.33
65 66 2.095059 CGTACGTACCTAGCAACCTTGT 60.095 50.000 19.67 0.00 0.00 3.16
66 67 2.095059 ACGTACGTACCTAGCAACCTTG 60.095 50.000 21.41 3.95 0.00 3.61
67 68 2.162681 ACGTACGTACCTAGCAACCTT 58.837 47.619 21.41 0.00 0.00 3.50
68 69 1.826385 ACGTACGTACCTAGCAACCT 58.174 50.000 21.41 0.00 0.00 3.50
69 70 2.536928 CGTACGTACGTACCTAGCAACC 60.537 54.545 38.76 20.23 45.80 3.77
70 71 2.694043 CGTACGTACGTACCTAGCAAC 58.306 52.381 38.76 23.09 45.80 4.17
82 83 1.988467 GGAAGCCAAGAACGTACGTAC 59.012 52.381 23.12 15.90 0.00 3.67
83 84 1.888512 AGGAAGCCAAGAACGTACGTA 59.111 47.619 23.12 0.00 0.00 3.57
84 85 0.677842 AGGAAGCCAAGAACGTACGT 59.322 50.000 16.72 16.72 0.00 3.57
85 86 1.067776 AGAGGAAGCCAAGAACGTACG 60.068 52.381 15.01 15.01 0.00 3.67
86 87 2.737252 CAAGAGGAAGCCAAGAACGTAC 59.263 50.000 0.00 0.00 0.00 3.67
87 88 2.870435 GCAAGAGGAAGCCAAGAACGTA 60.870 50.000 0.00 0.00 0.00 3.57
88 89 1.884235 CAAGAGGAAGCCAAGAACGT 58.116 50.000 0.00 0.00 0.00 3.99
89 90 0.519077 GCAAGAGGAAGCCAAGAACG 59.481 55.000 0.00 0.00 0.00 3.95
97 98 1.270826 GAAAAGTGGGCAAGAGGAAGC 59.729 52.381 0.00 0.00 0.00 3.86
98 99 1.537202 CGAAAAGTGGGCAAGAGGAAG 59.463 52.381 0.00 0.00 0.00 3.46
99 100 1.142060 TCGAAAAGTGGGCAAGAGGAA 59.858 47.619 0.00 0.00 0.00 3.36
100 101 0.762418 TCGAAAAGTGGGCAAGAGGA 59.238 50.000 0.00 0.00 0.00 3.71
101 102 1.740025 GATCGAAAAGTGGGCAAGAGG 59.260 52.381 0.00 0.00 0.00 3.69
102 103 2.426522 TGATCGAAAAGTGGGCAAGAG 58.573 47.619 0.00 0.00 0.00 2.85
103 104 2.552315 GTTGATCGAAAAGTGGGCAAGA 59.448 45.455 0.00 0.00 0.00 3.02
104 105 2.554032 AGTTGATCGAAAAGTGGGCAAG 59.446 45.455 0.00 0.00 0.00 4.01
105 106 2.552315 GAGTTGATCGAAAAGTGGGCAA 59.448 45.455 0.00 0.00 0.00 4.52
106 107 2.151202 GAGTTGATCGAAAAGTGGGCA 58.849 47.619 0.00 0.00 0.00 5.36
107 108 1.468914 GGAGTTGATCGAAAAGTGGGC 59.531 52.381 0.00 0.00 0.00 5.36
108 109 3.003480 GAGGAGTTGATCGAAAAGTGGG 58.997 50.000 0.00 0.00 0.00 4.61
109 110 2.668457 CGAGGAGTTGATCGAAAAGTGG 59.332 50.000 0.00 0.00 41.40 4.00
110 111 3.318017 ACGAGGAGTTGATCGAAAAGTG 58.682 45.455 1.13 0.00 41.40 3.16
111 112 3.662247 ACGAGGAGTTGATCGAAAAGT 57.338 42.857 1.13 0.00 41.40 2.66
122 123 0.037605 CGGGTAAGCAACGAGGAGTT 60.038 55.000 0.00 0.00 45.45 3.01
123 124 0.896940 TCGGGTAAGCAACGAGGAGT 60.897 55.000 0.00 0.00 32.29 3.85
124 125 0.460311 ATCGGGTAAGCAACGAGGAG 59.540 55.000 0.00 0.00 40.21 3.69
125 126 0.458669 GATCGGGTAAGCAACGAGGA 59.541 55.000 0.00 0.00 40.21 3.71
126 127 0.174845 TGATCGGGTAAGCAACGAGG 59.825 55.000 0.00 0.00 40.21 4.63
127 128 1.278238 GTGATCGGGTAAGCAACGAG 58.722 55.000 0.00 0.00 40.21 4.18
128 129 0.108520 GGTGATCGGGTAAGCAACGA 60.109 55.000 0.00 0.00 41.20 3.85
129 130 0.390603 TGGTGATCGGGTAAGCAACG 60.391 55.000 0.00 0.00 0.00 4.10
130 131 2.038387 ATGGTGATCGGGTAAGCAAC 57.962 50.000 0.00 0.00 0.00 4.17
131 132 2.799126 AATGGTGATCGGGTAAGCAA 57.201 45.000 0.00 0.00 0.00 3.91
132 133 2.799126 AAATGGTGATCGGGTAAGCA 57.201 45.000 0.00 0.00 0.00 3.91
133 134 5.570234 TTAAAAATGGTGATCGGGTAAGC 57.430 39.130 0.00 0.00 0.00 3.09
134 135 7.193595 GTGATTAAAAATGGTGATCGGGTAAG 58.806 38.462 0.00 0.00 0.00 2.34
135 136 6.095720 GGTGATTAAAAATGGTGATCGGGTAA 59.904 38.462 0.00 0.00 0.00 2.85
136 137 5.591067 GGTGATTAAAAATGGTGATCGGGTA 59.409 40.000 0.00 0.00 0.00 3.69
137 138 4.401202 GGTGATTAAAAATGGTGATCGGGT 59.599 41.667 0.00 0.00 0.00 5.28
138 139 4.400884 TGGTGATTAAAAATGGTGATCGGG 59.599 41.667 0.00 0.00 0.00 5.14
139 140 5.125417 AGTGGTGATTAAAAATGGTGATCGG 59.875 40.000 0.00 0.00 0.00 4.18
140 141 6.029607 CAGTGGTGATTAAAAATGGTGATCG 58.970 40.000 0.00 0.00 0.00 3.69
141 142 5.807011 GCAGTGGTGATTAAAAATGGTGATC 59.193 40.000 0.00 0.00 0.00 2.92
142 143 5.481473 AGCAGTGGTGATTAAAAATGGTGAT 59.519 36.000 0.00 0.00 0.00 3.06
143 144 4.832266 AGCAGTGGTGATTAAAAATGGTGA 59.168 37.500 0.00 0.00 0.00 4.02
144 145 5.138125 AGCAGTGGTGATTAAAAATGGTG 57.862 39.130 0.00 0.00 0.00 4.17
145 146 5.540911 CAAGCAGTGGTGATTAAAAATGGT 58.459 37.500 0.00 0.00 28.88 3.55
146 147 4.389687 GCAAGCAGTGGTGATTAAAAATGG 59.610 41.667 0.00 0.00 28.88 3.16
147 148 5.232463 AGCAAGCAGTGGTGATTAAAAATG 58.768 37.500 0.00 0.00 36.32 2.32
148 149 5.473066 AGCAAGCAGTGGTGATTAAAAAT 57.527 34.783 0.00 0.00 36.32 1.82
149 150 4.935352 AGCAAGCAGTGGTGATTAAAAA 57.065 36.364 0.00 0.00 36.32 1.94
150 151 5.070001 ACTAGCAAGCAGTGGTGATTAAAA 58.930 37.500 0.00 0.00 38.75 1.52
151 152 4.651778 ACTAGCAAGCAGTGGTGATTAAA 58.348 39.130 0.00 0.00 38.75 1.52
152 153 4.286297 ACTAGCAAGCAGTGGTGATTAA 57.714 40.909 0.00 0.00 38.75 1.40
153 154 3.981071 ACTAGCAAGCAGTGGTGATTA 57.019 42.857 0.00 0.00 38.75 1.75
154 155 2.867109 ACTAGCAAGCAGTGGTGATT 57.133 45.000 0.00 0.00 38.75 2.57
155 156 2.834549 AGTACTAGCAAGCAGTGGTGAT 59.165 45.455 0.00 0.00 38.75 3.06
156 157 2.248248 AGTACTAGCAAGCAGTGGTGA 58.752 47.619 0.00 0.00 38.75 4.02
157 158 2.751166 AGTACTAGCAAGCAGTGGTG 57.249 50.000 0.00 0.00 38.75 4.17
158 159 3.432378 AGTAGTACTAGCAAGCAGTGGT 58.568 45.455 1.87 0.00 41.93 4.16
159 160 4.177026 CAAGTAGTACTAGCAAGCAGTGG 58.823 47.826 1.87 0.00 0.00 4.00
160 161 4.177026 CCAAGTAGTACTAGCAAGCAGTG 58.823 47.826 1.87 0.00 0.00 3.66
161 162 3.368531 GCCAAGTAGTACTAGCAAGCAGT 60.369 47.826 16.56 0.00 30.54 4.40
162 163 3.190874 GCCAAGTAGTACTAGCAAGCAG 58.809 50.000 16.56 0.00 30.54 4.24
163 164 2.565391 TGCCAAGTAGTACTAGCAAGCA 59.435 45.455 20.15 13.95 35.51 3.91
164 165 3.190874 CTGCCAAGTAGTACTAGCAAGC 58.809 50.000 21.77 13.18 37.23 4.01
165 166 4.457834 ACTGCCAAGTAGTACTAGCAAG 57.542 45.455 21.77 18.24 37.23 4.01
176 177 0.036388 GCTGGTGCTACTGCCAAGTA 60.036 55.000 0.00 0.00 37.88 2.24
177 178 1.302832 GCTGGTGCTACTGCCAAGT 60.303 57.895 0.00 0.00 40.67 3.16
178 179 3.583383 GCTGGTGCTACTGCCAAG 58.417 61.111 0.00 0.00 38.71 3.61
183 184 7.578928 ACTGTAAGCTAAGCTGGTGCTACTG 62.579 48.000 8.47 11.63 44.37 2.74
184 185 5.597905 ACTGTAAGCTAAGCTGGTGCTACT 61.598 45.833 8.47 0.00 44.37 2.57
185 186 3.368531 ACTGTAAGCTAAGCTGGTGCTAC 60.369 47.826 8.47 7.99 44.37 3.58
186 187 2.832129 ACTGTAAGCTAAGCTGGTGCTA 59.168 45.455 8.47 0.00 44.37 3.49
187 188 1.625818 ACTGTAAGCTAAGCTGGTGCT 59.374 47.619 2.98 2.98 46.50 4.40
188 189 1.734465 CACTGTAAGCTAAGCTGGTGC 59.266 52.381 0.00 0.00 39.62 5.01
189 190 1.734465 GCACTGTAAGCTAAGCTGGTG 59.266 52.381 0.00 0.00 39.62 4.17
190 191 1.339151 GGCACTGTAAGCTAAGCTGGT 60.339 52.381 0.00 0.00 39.62 4.00
191 192 1.373570 GGCACTGTAAGCTAAGCTGG 58.626 55.000 0.00 0.00 39.62 4.85
192 193 1.002366 CGGCACTGTAAGCTAAGCTG 58.998 55.000 0.00 0.00 39.62 4.24
193 194 0.741221 GCGGCACTGTAAGCTAAGCT 60.741 55.000 0.00 0.00 42.56 3.74
194 195 1.706287 GGCGGCACTGTAAGCTAAGC 61.706 60.000 3.07 0.00 37.60 3.09
195 196 1.421410 CGGCGGCACTGTAAGCTAAG 61.421 60.000 10.53 0.00 37.60 2.18
196 197 1.447140 CGGCGGCACTGTAAGCTAA 60.447 57.895 10.53 0.00 37.60 3.09
197 198 2.183300 CGGCGGCACTGTAAGCTA 59.817 61.111 10.53 0.00 37.60 3.32
198 199 4.760047 CCGGCGGCACTGTAAGCT 62.760 66.667 15.42 0.00 37.60 3.74
212 213 4.394712 AGAGCCAGAAACCGCCGG 62.395 66.667 0.00 0.00 0.00 6.13
213 214 3.121030 CAGAGCCAGAAACCGCCG 61.121 66.667 0.00 0.00 0.00 6.46
214 215 3.435186 GCAGAGCCAGAAACCGCC 61.435 66.667 0.00 0.00 0.00 6.13
215 216 2.359230 AGCAGAGCCAGAAACCGC 60.359 61.111 0.00 0.00 0.00 5.68
216 217 2.097038 CGAGCAGAGCCAGAAACCG 61.097 63.158 0.00 0.00 0.00 4.44
217 218 2.394563 GCGAGCAGAGCCAGAAACC 61.395 63.158 0.00 0.00 0.00 3.27
218 219 1.357991 GAGCGAGCAGAGCCAGAAAC 61.358 60.000 0.00 0.00 34.64 2.78
219 220 1.079543 GAGCGAGCAGAGCCAGAAA 60.080 57.895 0.00 0.00 34.64 2.52
220 221 1.981312 AGAGCGAGCAGAGCCAGAA 60.981 57.895 0.00 0.00 34.64 3.02
221 222 2.362247 AGAGCGAGCAGAGCCAGA 60.362 61.111 0.00 0.00 34.64 3.86
222 223 2.202770 CAGAGCGAGCAGAGCCAG 60.203 66.667 0.00 0.00 34.64 4.85
223 224 3.767806 CCAGAGCGAGCAGAGCCA 61.768 66.667 0.00 0.00 34.64 4.75
224 225 3.429080 CTCCAGAGCGAGCAGAGCC 62.429 68.421 0.00 0.00 34.64 4.70
225 226 2.104729 CTCCAGAGCGAGCAGAGC 59.895 66.667 0.00 0.00 0.00 4.09
226 227 2.806929 CCTCCAGAGCGAGCAGAG 59.193 66.667 0.00 0.00 0.00 3.35
227 228 3.456365 GCCTCCAGAGCGAGCAGA 61.456 66.667 0.00 0.00 0.00 4.26
256 257 1.796796 GTGTCGAGAAGGGCAATGC 59.203 57.895 0.00 0.00 0.00 3.56
257 258 1.361668 CCGTGTCGAGAAGGGCAATG 61.362 60.000 6.64 0.00 0.00 2.82
258 259 1.079127 CCGTGTCGAGAAGGGCAAT 60.079 57.895 6.64 0.00 0.00 3.56
259 260 2.342279 CCGTGTCGAGAAGGGCAA 59.658 61.111 6.64 0.00 0.00 4.52
260 261 4.373116 GCCGTGTCGAGAAGGGCA 62.373 66.667 21.09 0.00 45.73 5.36
262 263 4.452733 GGGCCGTGTCGAGAAGGG 62.453 72.222 16.01 9.23 0.00 3.95
263 264 4.796231 CGGGCCGTGTCGAGAAGG 62.796 72.222 19.97 10.26 0.00 3.46
264 265 4.796231 CCGGGCCGTGTCGAGAAG 62.796 72.222 26.32 1.35 0.00 2.85
275 276 4.717313 GTCAGTTCACCCCGGGCC 62.717 72.222 17.73 0.00 0.00 5.80
276 277 3.607370 GAGTCAGTTCACCCCGGGC 62.607 68.421 17.73 0.00 0.00 6.13
277 278 2.663196 GAGTCAGTTCACCCCGGG 59.337 66.667 15.80 15.80 0.00 5.73
278 279 1.553690 ATGGAGTCAGTTCACCCCGG 61.554 60.000 0.00 0.00 0.00 5.73
279 280 0.391661 CATGGAGTCAGTTCACCCCG 60.392 60.000 0.00 0.00 0.00 5.73
280 281 0.035056 CCATGGAGTCAGTTCACCCC 60.035 60.000 5.56 0.00 0.00 4.95
281 282 0.035056 CCCATGGAGTCAGTTCACCC 60.035 60.000 15.22 0.00 0.00 4.61
282 283 0.035056 CCCCATGGAGTCAGTTCACC 60.035 60.000 15.22 0.00 0.00 4.02
283 284 0.693049 ACCCCATGGAGTCAGTTCAC 59.307 55.000 15.22 0.00 34.81 3.18
284 285 1.351017 GAACCCCATGGAGTCAGTTCA 59.649 52.381 15.22 0.00 34.99 3.18
285 286 1.340114 GGAACCCCATGGAGTCAGTTC 60.340 57.143 15.22 16.16 34.31 3.01
286 287 0.698818 GGAACCCCATGGAGTCAGTT 59.301 55.000 15.22 8.46 34.81 3.16
287 288 1.553690 CGGAACCCCATGGAGTCAGT 61.554 60.000 15.22 0.00 34.81 3.41
288 289 1.221840 CGGAACCCCATGGAGTCAG 59.778 63.158 15.22 4.20 34.81 3.51
289 290 1.131303 AACGGAACCCCATGGAGTCA 61.131 55.000 15.22 0.00 34.81 3.41
290 291 0.037734 AAACGGAACCCCATGGAGTC 59.962 55.000 15.22 7.03 34.81 3.36
291 292 0.037734 GAAACGGAACCCCATGGAGT 59.962 55.000 15.22 1.89 34.81 3.85
292 293 1.024579 CGAAACGGAACCCCATGGAG 61.025 60.000 15.22 0.97 34.81 3.86
293 294 1.003112 CGAAACGGAACCCCATGGA 60.003 57.895 15.22 0.00 34.81 3.41
294 295 1.302993 ACGAAACGGAACCCCATGG 60.303 57.895 4.14 4.14 37.80 3.66
295 296 1.632046 CGACGAAACGGAACCCCATG 61.632 60.000 0.00 0.00 0.00 3.66
296 297 1.375013 CGACGAAACGGAACCCCAT 60.375 57.895 0.00 0.00 0.00 4.00
297 298 2.029369 CGACGAAACGGAACCCCA 59.971 61.111 0.00 0.00 0.00 4.96
298 299 2.023771 GACGACGAAACGGAACCCC 61.024 63.158 0.00 0.00 37.61 4.95
299 300 0.598419 AAGACGACGAAACGGAACCC 60.598 55.000 0.00 0.00 37.61 4.11
300 301 0.780596 GAAGACGACGAAACGGAACC 59.219 55.000 0.00 0.00 37.61 3.62
301 302 1.450905 CTGAAGACGACGAAACGGAAC 59.549 52.381 0.00 0.00 37.61 3.62
302 303 1.601162 CCTGAAGACGACGAAACGGAA 60.601 52.381 0.00 0.00 37.61 4.30
303 304 0.039798 CCTGAAGACGACGAAACGGA 60.040 55.000 0.00 0.00 37.61 4.69
304 305 1.615107 GCCTGAAGACGACGAAACGG 61.615 60.000 0.00 0.00 37.61 4.44
305 306 0.663568 AGCCTGAAGACGACGAAACG 60.664 55.000 0.00 0.00 39.31 3.60
306 307 1.061485 GAGCCTGAAGACGACGAAAC 58.939 55.000 0.00 0.00 0.00 2.78
307 308 0.038526 GGAGCCTGAAGACGACGAAA 60.039 55.000 0.00 0.00 0.00 3.46
308 309 1.585006 GGAGCCTGAAGACGACGAA 59.415 57.895 0.00 0.00 0.00 3.85
309 310 2.341101 GGGAGCCTGAAGACGACGA 61.341 63.158 0.00 0.00 0.00 4.20
310 311 1.878656 AAGGGAGCCTGAAGACGACG 61.879 60.000 0.00 0.00 32.13 5.12
311 312 0.108567 GAAGGGAGCCTGAAGACGAC 60.109 60.000 0.00 0.00 32.13 4.34
312 313 0.251832 AGAAGGGAGCCTGAAGACGA 60.252 55.000 0.00 0.00 32.13 4.20
313 314 0.610687 AAGAAGGGAGCCTGAAGACG 59.389 55.000 0.00 0.00 32.13 4.18
314 315 1.349357 ACAAGAAGGGAGCCTGAAGAC 59.651 52.381 0.00 0.00 32.13 3.01
315 316 1.349026 CACAAGAAGGGAGCCTGAAGA 59.651 52.381 0.00 0.00 32.13 2.87
316 317 1.349026 TCACAAGAAGGGAGCCTGAAG 59.651 52.381 0.00 0.00 32.13 3.02
317 318 1.349026 CTCACAAGAAGGGAGCCTGAA 59.651 52.381 0.00 0.00 41.74 3.02
318 319 0.979665 CTCACAAGAAGGGAGCCTGA 59.020 55.000 0.00 0.00 41.74 3.86
319 320 3.547567 CTCACAAGAAGGGAGCCTG 57.452 57.895 0.00 0.00 41.74 4.85
324 325 0.832135 AGGCGTCTCACAAGAAGGGA 60.832 55.000 0.00 0.00 32.30 4.20
325 326 0.390472 GAGGCGTCTCACAAGAAGGG 60.390 60.000 13.26 0.00 39.74 3.95
326 327 0.734253 CGAGGCGTCTCACAAGAAGG 60.734 60.000 18.62 0.00 39.95 3.46
327 328 1.347817 GCGAGGCGTCTCACAAGAAG 61.348 60.000 18.62 0.00 39.95 2.85
328 329 1.372997 GCGAGGCGTCTCACAAGAA 60.373 57.895 18.62 0.00 39.95 2.52
329 330 2.258591 GCGAGGCGTCTCACAAGA 59.741 61.111 18.62 0.00 39.95 3.02
330 331 2.811317 GGCGAGGCGTCTCACAAG 60.811 66.667 18.62 1.13 39.95 3.16
331 332 3.303135 AGGCGAGGCGTCTCACAA 61.303 61.111 18.62 0.00 37.12 3.33
332 333 4.056125 CAGGCGAGGCGTCTCACA 62.056 66.667 18.62 0.00 40.90 3.58
333 334 4.803426 CCAGGCGAGGCGTCTCAC 62.803 72.222 18.62 7.26 40.90 3.51
345 346 4.162690 CTAGTCCGGTGCCCAGGC 62.163 72.222 0.00 0.38 42.35 4.85
346 347 4.162690 GCTAGTCCGGTGCCCAGG 62.163 72.222 0.00 0.00 0.00 4.45
347 348 3.077556 AGCTAGTCCGGTGCCCAG 61.078 66.667 0.00 0.00 0.00 4.45
348 349 3.075005 GAGCTAGTCCGGTGCCCA 61.075 66.667 0.00 0.00 0.00 5.36
349 350 3.851128 GGAGCTAGTCCGGTGCCC 61.851 72.222 0.00 2.82 34.84 5.36
357 358 1.810151 CTAGGATCGCTGGAGCTAGTC 59.190 57.143 0.00 0.00 39.32 2.59
358 359 1.422024 TCTAGGATCGCTGGAGCTAGT 59.578 52.381 0.00 0.00 39.32 2.57
359 360 2.083774 CTCTAGGATCGCTGGAGCTAG 58.916 57.143 10.22 3.54 39.32 3.42
360 361 1.700186 TCTCTAGGATCGCTGGAGCTA 59.300 52.381 15.30 2.55 39.32 3.32
361 362 0.476338 TCTCTAGGATCGCTGGAGCT 59.524 55.000 15.30 0.00 39.32 4.09
362 363 0.881118 CTCTCTAGGATCGCTGGAGC 59.119 60.000 15.30 0.00 37.78 4.70
363 364 2.038426 TCTCTCTCTAGGATCGCTGGAG 59.962 54.545 14.44 14.44 0.00 3.86
364 365 2.038426 CTCTCTCTCTAGGATCGCTGGA 59.962 54.545 0.00 0.00 0.00 3.86
365 366 2.038426 TCTCTCTCTCTAGGATCGCTGG 59.962 54.545 0.00 0.00 0.00 4.85
366 367 3.006859 TCTCTCTCTCTCTAGGATCGCTG 59.993 52.174 0.00 0.00 0.00 5.18
367 368 3.239449 TCTCTCTCTCTCTAGGATCGCT 58.761 50.000 0.00 0.00 0.00 4.93
368 369 3.258372 TCTCTCTCTCTCTCTAGGATCGC 59.742 52.174 0.00 0.00 0.00 4.58
369 370 4.767409 TCTCTCTCTCTCTCTCTAGGATCG 59.233 50.000 0.00 0.00 0.00 3.69
370 371 6.013379 TCTCTCTCTCTCTCTCTCTAGGATC 58.987 48.000 0.00 0.00 0.00 3.36
371 372 5.970289 TCTCTCTCTCTCTCTCTCTAGGAT 58.030 45.833 0.00 0.00 0.00 3.24
372 373 5.134509 TCTCTCTCTCTCTCTCTCTCTAGGA 59.865 48.000 0.00 0.00 0.00 2.94
373 374 5.389520 TCTCTCTCTCTCTCTCTCTCTAGG 58.610 50.000 0.00 0.00 0.00 3.02
374 375 6.303054 TCTCTCTCTCTCTCTCTCTCTCTAG 58.697 48.000 0.00 0.00 0.00 2.43
375 376 6.101881 TCTCTCTCTCTCTCTCTCTCTCTCTA 59.898 46.154 0.00 0.00 0.00 2.43
376 377 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
377 378 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
378 379 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
379 380 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
380 381 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
381 382 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
382 383 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
383 384 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
384 385 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
385 386 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
386 387 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
387 388 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
388 389 4.222336 CCTCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
389 390 3.323403 CCCTCTCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
390 391 3.312890 CCCTCTCTCTCTCTCTCTCTCT 58.687 54.545 0.00 0.00 0.00 3.10
391 392 2.370189 CCCCTCTCTCTCTCTCTCTCTC 59.630 59.091 0.00 0.00 0.00 3.20
392 393 2.412591 CCCCTCTCTCTCTCTCTCTCT 58.587 57.143 0.00 0.00 0.00 3.10
393 394 1.202818 GCCCCTCTCTCTCTCTCTCTC 60.203 61.905 0.00 0.00 0.00 3.20
394 395 0.846693 GCCCCTCTCTCTCTCTCTCT 59.153 60.000 0.00 0.00 0.00 3.10
395 396 0.535102 CGCCCCTCTCTCTCTCTCTC 60.535 65.000 0.00 0.00 0.00 3.20
396 397 1.279025 ACGCCCCTCTCTCTCTCTCT 61.279 60.000 0.00 0.00 0.00 3.10
397 398 0.395173 AACGCCCCTCTCTCTCTCTC 60.395 60.000 0.00 0.00 0.00 3.20
398 399 0.395173 GAACGCCCCTCTCTCTCTCT 60.395 60.000 0.00 0.00 0.00 3.10
399 400 1.720694 CGAACGCCCCTCTCTCTCTC 61.721 65.000 0.00 0.00 0.00 3.20
400 401 1.751162 CGAACGCCCCTCTCTCTCT 60.751 63.158 0.00 0.00 0.00 3.10
401 402 2.047443 ACGAACGCCCCTCTCTCTC 61.047 63.158 0.00 0.00 0.00 3.20
402 403 2.035940 ACGAACGCCCCTCTCTCT 59.964 61.111 0.00 0.00 0.00 3.10
403 404 2.182030 CACGAACGCCCCTCTCTC 59.818 66.667 0.00 0.00 0.00 3.20
404 405 4.070552 GCACGAACGCCCCTCTCT 62.071 66.667 0.00 0.00 0.00 3.10
405 406 2.707849 TAGCACGAACGCCCCTCTC 61.708 63.158 0.00 0.00 0.00 3.20
406 407 2.678934 TAGCACGAACGCCCCTCT 60.679 61.111 0.00 0.00 0.00 3.69
407 408 2.508663 GTAGCACGAACGCCCCTC 60.509 66.667 0.00 0.00 0.00 4.30
408 409 4.078516 GGTAGCACGAACGCCCCT 62.079 66.667 0.00 0.00 0.00 4.79
412 413 3.116531 GTGGGGTAGCACGAACGC 61.117 66.667 0.00 0.00 0.00 4.84
413 414 2.433664 GGTGGGGTAGCACGAACG 60.434 66.667 0.00 0.00 0.00 3.95
414 415 2.046604 GGGTGGGGTAGCACGAAC 60.047 66.667 0.00 0.00 0.00 3.95
415 416 3.324108 GGGGTGGGGTAGCACGAA 61.324 66.667 0.00 0.00 0.00 3.85
416 417 4.642488 TGGGGTGGGGTAGCACGA 62.642 66.667 0.00 0.00 31.12 4.35
417 418 4.404098 GTGGGGTGGGGTAGCACG 62.404 72.222 0.00 0.00 31.12 5.34
418 419 4.404098 CGTGGGGTGGGGTAGCAC 62.404 72.222 0.00 0.00 0.00 4.40
446 447 4.069232 TCCCGTGAGCTCGCCAAG 62.069 66.667 21.21 10.22 0.00 3.61
447 448 4.373116 GTCCCGTGAGCTCGCCAA 62.373 66.667 21.21 4.33 0.00 4.52
479 480 3.567797 GTGCTCGGCGGAATGCTC 61.568 66.667 7.21 4.38 45.43 4.26
489 490 0.108186 TGCTTGTAGATGGTGCTCGG 60.108 55.000 0.00 0.00 0.00 4.63
498 499 5.312079 GGGAATCTTGCTATGCTTGTAGAT 58.688 41.667 0.00 0.00 0.00 1.98
499 500 4.708177 GGGAATCTTGCTATGCTTGTAGA 58.292 43.478 0.00 0.00 0.00 2.59
500 501 3.496130 CGGGAATCTTGCTATGCTTGTAG 59.504 47.826 0.00 0.00 0.00 2.74
501 502 3.466836 CGGGAATCTTGCTATGCTTGTA 58.533 45.455 0.00 0.00 0.00 2.41
502 503 2.292267 CGGGAATCTTGCTATGCTTGT 58.708 47.619 0.00 0.00 0.00 3.16
503 504 1.605710 CCGGGAATCTTGCTATGCTTG 59.394 52.381 0.00 0.00 0.00 4.01
504 505 1.972872 CCGGGAATCTTGCTATGCTT 58.027 50.000 0.00 0.00 0.00 3.91
507 516 1.845809 GCGCCGGGAATCTTGCTATG 61.846 60.000 2.18 0.00 0.00 2.23
590 600 0.668535 AAGAAGGCGGCTTTTGTGTC 59.331 50.000 26.25 11.87 0.00 3.67
658 681 0.107831 TAGAGAGAGAGAGCTCGGGC 59.892 60.000 8.37 0.00 45.98 6.13
678 701 3.571588 GGCGAGCTAGCAGCAAGC 61.572 66.667 28.17 19.43 45.56 4.01
679 702 1.094073 AATGGCGAGCTAGCAGCAAG 61.094 55.000 28.17 12.33 45.56 4.01
680 703 1.078214 AATGGCGAGCTAGCAGCAA 60.078 52.632 28.17 21.61 45.56 3.91
681 704 1.522355 GAATGGCGAGCTAGCAGCA 60.522 57.895 28.17 18.18 45.56 4.41
682 705 2.250237 GGAATGGCGAGCTAGCAGC 61.250 63.158 20.82 22.10 42.84 5.25
685 715 0.378610 GTTTGGAATGGCGAGCTAGC 59.621 55.000 10.75 10.75 0.00 3.42
727 766 4.293901 AGGATTAAGTAGGCAAAAGGGGAA 59.706 41.667 0.00 0.00 0.00 3.97
728 767 3.856206 AGGATTAAGTAGGCAAAAGGGGA 59.144 43.478 0.00 0.00 0.00 4.81
729 768 3.954258 CAGGATTAAGTAGGCAAAAGGGG 59.046 47.826 0.00 0.00 0.00 4.79
730 769 3.381590 GCAGGATTAAGTAGGCAAAAGGG 59.618 47.826 0.00 0.00 0.00 3.95
732 771 4.096984 CAGGCAGGATTAAGTAGGCAAAAG 59.903 45.833 0.00 0.00 0.00 2.27
734 773 3.620488 CAGGCAGGATTAAGTAGGCAAA 58.380 45.455 0.00 0.00 0.00 3.68
735 774 2.683742 GCAGGCAGGATTAAGTAGGCAA 60.684 50.000 0.00 0.00 0.00 4.52
737 776 1.141858 AGCAGGCAGGATTAAGTAGGC 59.858 52.381 0.00 0.00 0.00 3.93
739 778 3.135530 AGGAAGCAGGCAGGATTAAGTAG 59.864 47.826 0.00 0.00 0.00 2.57
740 779 3.115390 AGGAAGCAGGCAGGATTAAGTA 58.885 45.455 0.00 0.00 0.00 2.24
741 780 1.918957 AGGAAGCAGGCAGGATTAAGT 59.081 47.619 0.00 0.00 0.00 2.24
744 783 1.683011 GCAAGGAAGCAGGCAGGATTA 60.683 52.381 0.00 0.00 0.00 1.75
745 784 0.969409 GCAAGGAAGCAGGCAGGATT 60.969 55.000 0.00 0.00 0.00 3.01
746 785 1.379576 GCAAGGAAGCAGGCAGGAT 60.380 57.895 0.00 0.00 0.00 3.24
747 786 2.034687 GCAAGGAAGCAGGCAGGA 59.965 61.111 0.00 0.00 0.00 3.86
759 798 0.309922 CAGTGTGTGAGCAAGCAAGG 59.690 55.000 0.00 0.00 0.00 3.61
779 818 5.695363 CAGAGGATGCATATCAGTAACAGTG 59.305 44.000 0.00 0.00 34.90 3.66
780 819 5.851720 CAGAGGATGCATATCAGTAACAGT 58.148 41.667 0.00 0.00 34.90 3.55
821 860 4.487412 GCCTGCAACTGCGATGGC 62.487 66.667 14.33 14.33 45.83 4.40
822 861 3.057548 TGCCTGCAACTGCGATGG 61.058 61.111 0.00 1.03 45.83 3.51
823 862 2.177531 GTGCCTGCAACTGCGATG 59.822 61.111 0.00 0.00 45.83 3.84
824 863 2.033141 AGTGCCTGCAACTGCGAT 59.967 55.556 0.00 0.00 45.83 4.58
825 864 2.666190 GAGTGCCTGCAACTGCGA 60.666 61.111 0.00 0.00 45.83 5.10
826 865 2.667536 AGAGTGCCTGCAACTGCG 60.668 61.111 0.00 0.00 45.83 5.18
827 866 2.952245 CAGAGTGCCTGCAACTGC 59.048 61.111 12.28 0.00 42.50 4.40
861 900 0.101219 TGATCGATGGTCAGTCAGCG 59.899 55.000 0.54 0.00 46.31 5.18
862 901 2.299993 TTGATCGATGGTCAGTCAGC 57.700 50.000 0.54 0.00 0.00 4.26
863 902 3.129109 CCATTGATCGATGGTCAGTCAG 58.871 50.000 28.00 5.67 41.37 3.51
867 906 0.863799 CGCCATTGATCGATGGTCAG 59.136 55.000 33.39 23.78 46.74 3.51
872 911 0.939419 TGCTTCGCCATTGATCGATG 59.061 50.000 15.16 15.16 34.48 3.84
873 912 0.940126 GTGCTTCGCCATTGATCGAT 59.060 50.000 0.00 0.00 34.48 3.59
874 913 1.420641 CGTGCTTCGCCATTGATCGA 61.421 55.000 0.00 0.00 0.00 3.59
875 914 1.011904 CGTGCTTCGCCATTGATCG 60.012 57.895 0.00 0.00 0.00 3.69
895 934 2.584608 GCTGAGGGAGCGGCTTAA 59.415 61.111 2.97 0.00 38.15 1.85
926 968 3.443925 TCGAGGTCGAGCTGCAGG 61.444 66.667 23.97 8.45 44.22 4.85
944 987 2.048222 TGAAGAACCGCCGCTGAG 60.048 61.111 0.00 0.00 0.00 3.35
950 993 2.815647 CGAGGCTGAAGAACCGCC 60.816 66.667 0.00 0.00 46.86 6.13
964 1007 2.125912 CAACAGAGGGCCGACGAG 60.126 66.667 0.00 0.00 0.00 4.18
970 1013 0.322546 ACGAAATCCAACAGAGGGCC 60.323 55.000 0.00 0.00 0.00 5.80
971 1014 1.200020 CAACGAAATCCAACAGAGGGC 59.800 52.381 0.00 0.00 0.00 5.19
973 1016 1.812571 CCCAACGAAATCCAACAGAGG 59.187 52.381 0.00 0.00 0.00 3.69
974 1017 1.812571 CCCCAACGAAATCCAACAGAG 59.187 52.381 0.00 0.00 0.00 3.35
975 1018 1.546773 CCCCCAACGAAATCCAACAGA 60.547 52.381 0.00 0.00 0.00 3.41
976 1019 0.887933 CCCCCAACGAAATCCAACAG 59.112 55.000 0.00 0.00 0.00 3.16
977 1020 3.043998 CCCCCAACGAAATCCAACA 57.956 52.632 0.00 0.00 0.00 3.33
1221 1269 2.093973 TGGAGAAGAAGGATTGAGACGC 60.094 50.000 0.00 0.00 0.00 5.19
1227 1275 3.664107 TGTTCGTGGAGAAGAAGGATTG 58.336 45.455 0.00 0.00 39.95 2.67
1237 1285 0.827925 AGCAGGACTGTTCGTGGAGA 60.828 55.000 0.82 0.00 37.97 3.71
1240 1288 0.668706 CAGAGCAGGACTGTTCGTGG 60.669 60.000 9.94 2.01 44.12 4.94
1285 1338 4.730949 AACTTGAGCATTCCATGGATTG 57.269 40.909 25.79 25.79 0.00 2.67
1286 1339 5.750352 AAAACTTGAGCATTCCATGGATT 57.250 34.783 17.06 9.61 0.00 3.01
1289 1342 5.143376 AGAAAAACTTGAGCATTCCATGG 57.857 39.130 4.97 4.97 0.00 3.66
1325 1378 4.243008 TTCTTGGTGGTCGCCGCA 62.243 61.111 10.79 0.00 35.42 5.69
1331 1384 1.671379 GGGCGTCTTCTTGGTGGTC 60.671 63.158 0.00 0.00 0.00 4.02
1425 1478 2.161855 TGAAGATGAACCATGTGCACC 58.838 47.619 15.69 0.00 0.00 5.01
1428 1481 2.440409 ACCTGAAGATGAACCATGTGC 58.560 47.619 0.00 0.00 0.00 4.57
1429 1482 4.074259 TGAACCTGAAGATGAACCATGTG 58.926 43.478 0.00 0.00 0.00 3.21
1456 1509 3.424724 TGAGGCCACTAACCCCTATTA 57.575 47.619 5.01 0.00 0.00 0.98
1457 1510 2.280308 TGAGGCCACTAACCCCTATT 57.720 50.000 5.01 0.00 0.00 1.73
1458 1511 2.057922 CATGAGGCCACTAACCCCTAT 58.942 52.381 5.01 0.00 0.00 2.57
1475 1528 3.067180 CAGGGCTAAGTGGTTAATGCATG 59.933 47.826 0.00 0.00 0.00 4.06
1484 1537 2.684927 GCATTCATCAGGGCTAAGTGGT 60.685 50.000 0.00 0.00 0.00 4.16
1487 1540 3.285484 CAAGCATTCATCAGGGCTAAGT 58.715 45.455 0.00 0.00 35.11 2.24
1488 1541 2.621998 CCAAGCATTCATCAGGGCTAAG 59.378 50.000 0.00 0.00 35.11 2.18
1492 1545 0.685458 ACCCAAGCATTCATCAGGGC 60.685 55.000 0.00 0.00 39.97 5.19
1509 1563 1.239347 GCCTGTGGAAGACAAGAACC 58.761 55.000 0.00 0.00 32.80 3.62
1510 1564 1.239347 GGCCTGTGGAAGACAAGAAC 58.761 55.000 0.00 0.00 32.80 3.01
1518 1572 1.672356 CCTTGTCGGCCTGTGGAAG 60.672 63.158 0.00 0.00 0.00 3.46
1521 1575 2.358737 GTCCTTGTCGGCCTGTGG 60.359 66.667 0.00 0.00 0.00 4.17
1635 1696 6.658816 TGAACACTGTGGATAAAATACAGCAT 59.341 34.615 13.09 0.00 44.22 3.79
1636 1697 6.000840 TGAACACTGTGGATAAAATACAGCA 58.999 36.000 13.09 0.00 44.22 4.41
1637 1698 6.149474 AGTGAACACTGTGGATAAAATACAGC 59.851 38.462 13.09 0.00 44.22 4.40
1638 1699 7.672983 AGTGAACACTGTGGATAAAATACAG 57.327 36.000 13.09 0.00 45.48 2.74
1673 1734 5.849510 TCTTCGAATCAGGTGACAGTTTTA 58.150 37.500 0.00 0.00 0.00 1.52
1675 1736 4.336889 TCTTCGAATCAGGTGACAGTTT 57.663 40.909 0.00 0.00 0.00 2.66
1676 1737 4.543590 ATCTTCGAATCAGGTGACAGTT 57.456 40.909 0.00 0.00 0.00 3.16
1677 1738 4.221703 AGAATCTTCGAATCAGGTGACAGT 59.778 41.667 0.00 0.00 0.00 3.55
1678 1739 4.565962 CAGAATCTTCGAATCAGGTGACAG 59.434 45.833 0.00 0.00 0.00 3.51
1679 1740 4.021104 ACAGAATCTTCGAATCAGGTGACA 60.021 41.667 0.00 0.00 0.00 3.58
1680 1741 4.499183 ACAGAATCTTCGAATCAGGTGAC 58.501 43.478 0.00 0.00 0.00 3.67
1681 1742 4.220602 TGACAGAATCTTCGAATCAGGTGA 59.779 41.667 0.00 0.00 0.00 4.02
1872 1934 2.191128 AATGTGGACAGAAGGCTGAC 57.809 50.000 0.00 0.00 45.17 3.51
1898 1962 8.893727 GCATTCACAAAGAGTAACCAAGTATAT 58.106 33.333 0.00 0.00 0.00 0.86
1899 1963 7.335924 GGCATTCACAAAGAGTAACCAAGTATA 59.664 37.037 0.00 0.00 0.00 1.47
1900 1964 6.151144 GGCATTCACAAAGAGTAACCAAGTAT 59.849 38.462 0.00 0.00 0.00 2.12
1930 1995 5.593909 CCCAAAGACATAACCTATGCATGAA 59.406 40.000 10.16 0.00 39.79 2.57
1954 2019 1.262683 GCATCGAGTAATCCTGCAAGC 59.737 52.381 7.33 0.00 33.13 4.01
2270 2621 9.295214 CACAGTAGTAGTATATATCATGCAAGC 57.705 37.037 0.00 0.00 0.00 4.01
2282 2633 9.650714 ATCCCAAACATACACAGTAGTAGTATA 57.349 33.333 0.00 0.00 0.00 1.47
2284 2635 7.837689 AGATCCCAAACATACACAGTAGTAGTA 59.162 37.037 0.00 0.00 0.00 1.82
2285 2636 6.668283 AGATCCCAAACATACACAGTAGTAGT 59.332 38.462 0.00 0.00 0.00 2.73
2286 2637 7.113658 AGATCCCAAACATACACAGTAGTAG 57.886 40.000 0.00 0.00 0.00 2.57
2287 2638 7.490657 AAGATCCCAAACATACACAGTAGTA 57.509 36.000 0.00 0.00 0.00 1.82
2288 2639 6.374417 AAGATCCCAAACATACACAGTAGT 57.626 37.500 0.00 0.00 0.00 2.73
2289 2640 7.280205 GGTTAAGATCCCAAACATACACAGTAG 59.720 40.741 0.00 0.00 0.00 2.57
2291 2642 5.944007 GGTTAAGATCCCAAACATACACAGT 59.056 40.000 0.00 0.00 0.00 3.55
2292 2643 5.064707 CGGTTAAGATCCCAAACATACACAG 59.935 44.000 0.00 0.00 0.00 3.66
2293 2644 4.938832 CGGTTAAGATCCCAAACATACACA 59.061 41.667 0.00 0.00 0.00 3.72
2294 2645 5.180271 TCGGTTAAGATCCCAAACATACAC 58.820 41.667 0.00 0.00 0.00 2.90
2330 2681 3.950397 TGAACCTTTTCAGATGCCGTAT 58.050 40.909 0.00 0.00 36.79 3.06
2364 2716 5.560722 TCCAATAACCAAGAGTTCAGACA 57.439 39.130 0.00 0.00 40.05 3.41
2367 2719 5.500234 TCCATCCAATAACCAAGAGTTCAG 58.500 41.667 0.00 0.00 40.05 3.02
2377 2729 7.309990 CCATATGGTTCATTCCATCCAATAACC 60.310 40.741 14.09 0.00 45.67 2.85
2378 2730 7.451255 TCCATATGGTTCATTCCATCCAATAAC 59.549 37.037 21.28 0.00 45.67 1.89
2430 2782 4.348461 TGTATCCCCTAAATATGACGGCAA 59.652 41.667 0.00 0.00 0.00 4.52
2435 2787 7.778382 ACCAACTTTGTATCCCCTAAATATGAC 59.222 37.037 0.00 0.00 0.00 3.06
2449 2801 7.732996 ACTCTACACTGTAACCAACTTTGTAT 58.267 34.615 0.00 0.00 30.45 2.29
2535 2887 7.817962 TGTAAACAGATAGTAGAAAGACCAAGC 59.182 37.037 0.00 0.00 0.00 4.01
2611 2972 8.714906 ACTAATCAGGGTAGCTTAAATGTGTAT 58.285 33.333 0.00 0.00 0.00 2.29
2664 3025 9.673454 CTTTTAGGTAATACAAGTTGTTTCCAC 57.327 33.333 14.90 7.99 0.00 4.02
2677 3058 7.767659 ACCGAGTGGAAATCTTTTAGGTAATAC 59.232 37.037 0.00 0.00 39.21 1.89
2719 3100 2.721425 TTTGTCAGGAAGGGACGTTT 57.279 45.000 0.00 0.00 38.10 3.60
2727 3108 6.094881 TGAAACCAGTAACTTTTGTCAGGAAG 59.905 38.462 0.00 0.00 0.00 3.46
2820 3201 3.366396 ACTATCAGTGGACAGAACCGAT 58.634 45.455 0.00 0.00 0.00 4.18
2991 3374 5.565637 CGTCCTGAAGAGATTTCAAGAGTGA 60.566 44.000 0.00 0.00 0.00 3.41
2993 3376 4.524714 TCGTCCTGAAGAGATTTCAAGAGT 59.475 41.667 0.00 0.00 0.00 3.24
3033 3416 3.412237 TTGTACCTTGCTACAGGAACC 57.588 47.619 4.38 0.00 37.39 3.62
3042 3425 3.089284 GTTGGCCTTATTGTACCTTGCT 58.911 45.455 3.32 0.00 0.00 3.91
3134 3517 4.460948 TTTAGTTCTAGTTAGTGGGCGG 57.539 45.455 0.00 0.00 0.00 6.13
3135 3518 6.803642 AGTATTTAGTTCTAGTTAGTGGGCG 58.196 40.000 0.00 0.00 0.00 6.13
3137 3520 8.968969 ACAGAGTATTTAGTTCTAGTTAGTGGG 58.031 37.037 0.00 0.00 0.00 4.61
3160 3543 6.630444 AAAAATGCTATCTGCCTATGACAG 57.370 37.500 0.00 0.00 42.00 3.51
3299 3682 8.137437 GTCATTTTTCTCAAAGATGAAGGTGAA 58.863 33.333 4.31 0.00 34.49 3.18
3334 3717 4.141846 CCACTCACTATTGTAGATGTGGCT 60.142 45.833 0.00 0.00 37.25 4.75
3566 3951 3.547746 AGGCAGGTTCGTTCAAGTTTTA 58.452 40.909 0.00 0.00 0.00 1.52
3577 3962 3.185188 CGAAATGATGATAGGCAGGTTCG 59.815 47.826 0.00 0.00 32.77 3.95
3596 3985 5.061179 GCAAAGTAATATTAGGAGGGCGAA 58.939 41.667 0.00 0.00 0.00 4.70
3598 3987 4.385825 TGCAAAGTAATATTAGGAGGGCG 58.614 43.478 0.00 0.00 0.00 6.13
3611 4000 7.092079 CCATTCAATCTGTTGATGCAAAGTAA 58.908 34.615 0.00 0.00 43.49 2.24
3811 4200 7.909267 TGATAGAACAAATATTTGCAGACTCG 58.091 34.615 24.82 2.65 41.79 4.18
3940 4329 4.700268 CATGTGCTGCAAGTTACCATAA 57.300 40.909 2.77 0.00 35.30 1.90
4201 4590 4.153835 GGATGAACTTCACAGCTTTCTGAG 59.846 45.833 0.00 0.00 42.95 3.35
4222 4611 2.373169 AGAAACTGAATCAGTGGCAGGA 59.627 45.455 17.46 0.00 44.62 3.86
4366 4755 2.630098 TGAAATGGTTTTGCGGGATGAA 59.370 40.909 0.00 0.00 0.00 2.57
4372 4761 3.641437 TTCTCTGAAATGGTTTTGCGG 57.359 42.857 0.00 0.00 0.00 5.69
4419 4808 1.470098 GCAGTTGGTCATCGCAAATCT 59.530 47.619 0.00 0.00 0.00 2.40
4437 4826 3.216800 AGTTCTGCTTCTGAAACATGCA 58.783 40.909 0.00 0.00 0.00 3.96
4460 4849 5.596836 ACATTTTTGGTGTCACAACTGAT 57.403 34.783 5.12 0.00 0.00 2.90
4478 4867 7.286775 ACCTTCATTGTTACCACAGTTAACATT 59.713 33.333 8.61 0.00 34.24 2.71
4771 5167 7.934120 AGAGTATCAGTATTTATTGTGGAAGCC 59.066 37.037 0.00 0.00 37.82 4.35
4798 5194 5.196695 AGGCAAGAGTTCTGAAAAGTTTCT 58.803 37.500 5.45 0.00 38.02 2.52
4801 5197 4.786425 AGAGGCAAGAGTTCTGAAAAGTT 58.214 39.130 0.00 0.00 0.00 2.66
4856 5252 4.899239 CAGATCCGGGCTGCCGAC 62.899 72.222 13.40 0.00 34.88 4.79
5068 5464 4.848357 ACTTTGAGTACATCCCCAGATTG 58.152 43.478 0.00 0.00 0.00 2.67
5086 5482 3.769300 ACTCCTTCAAACTTGGCAACTTT 59.231 39.130 0.00 0.00 37.61 2.66
5176 5572 0.528684 GGTCGATGCTGTACTCTGCC 60.529 60.000 0.00 0.00 37.65 4.85
5199 5595 0.676466 TGGTTTCATCGGCTTCGCAT 60.676 50.000 0.00 0.00 0.00 4.73
5233 5629 5.718130 AGTGCTGTAGTACCATACCTTTGTA 59.282 40.000 0.00 0.00 0.00 2.41
5283 5679 9.840427 GAAGTTACTATCTCATTATCAGAGAGC 57.160 37.037 0.00 0.00 44.60 4.09
5341 5737 5.957842 TGAACCTGTTTGTCATGGATTAC 57.042 39.130 0.00 0.00 0.00 1.89
5343 5739 5.867903 TTTGAACCTGTTTGTCATGGATT 57.132 34.783 0.00 0.00 0.00 3.01
5355 5751 4.042187 ACAGATCCTAGCTTTTGAACCTGT 59.958 41.667 0.00 2.44 0.00 4.00
5391 5787 2.976589 TCTCTATACCGTGTGACGTCA 58.023 47.619 15.76 15.76 40.58 4.35
5394 5790 4.781071 GGTAATCTCTATACCGTGTGACG 58.219 47.826 0.00 0.00 42.11 4.35
5439 5835 1.340405 CCCTGGAGTCCAAACATGGAG 60.340 57.143 14.17 0.00 38.88 3.86
5451 5847 1.846712 GCTCAAGCTTCCCCTGGAGT 61.847 60.000 0.00 0.00 35.67 3.85
5478 5874 2.229062 CACGAGCTTCCAGTCTGAACTA 59.771 50.000 0.00 0.00 33.25 2.24
5535 5931 5.723887 AGATACTTACTCCCATGGATCATCC 59.276 44.000 15.22 0.00 36.96 3.51
5538 5934 4.284490 GCAGATACTTACTCCCATGGATCA 59.716 45.833 15.22 0.00 0.00 2.92
5583 5987 2.033801 GGACATGGATGTGTTATGCTGC 59.966 50.000 0.00 0.00 41.95 5.25
5620 6120 8.370940 TGAGTGAGTGAGTGAAGAATTTCTAAT 58.629 33.333 0.00 0.00 34.31 1.73
5625 6125 5.923204 AGTGAGTGAGTGAGTGAAGAATTT 58.077 37.500 0.00 0.00 0.00 1.82
5651 6151 4.511527 AGAAGCACAATATGGTCAGTGAG 58.488 43.478 0.00 0.00 38.37 3.51
5652 6152 4.223700 AGAGAAGCACAATATGGTCAGTGA 59.776 41.667 0.00 0.00 38.37 3.41
5653 6153 4.331992 CAGAGAAGCACAATATGGTCAGTG 59.668 45.833 0.00 0.00 38.37 3.66
5654 6154 4.223700 TCAGAGAAGCACAATATGGTCAGT 59.776 41.667 0.00 0.00 38.37 3.41
5661 6161 5.298777 GCCAAGATTCAGAGAAGCACAATAT 59.701 40.000 0.00 0.00 0.00 1.28
5742 6242 1.153745 GCCGTTCTCGCTCATCTGT 60.154 57.895 0.00 0.00 35.54 3.41
5804 6304 2.234661 AGTCGCATCCTGATCTGTGAAA 59.765 45.455 0.00 0.00 34.00 2.69
5805 6305 1.827344 AGTCGCATCCTGATCTGTGAA 59.173 47.619 0.00 0.00 34.00 3.18
5810 6310 2.205691 TGCAGTCGCATCCTGATCT 58.794 52.632 0.00 0.00 45.36 2.75
5823 6323 7.436118 TCTCTGCTTTATTTTGATTTTGCAGT 58.564 30.769 10.68 0.00 44.57 4.40
5827 6327 7.063074 CCTGCTCTCTGCTTTATTTTGATTTTG 59.937 37.037 0.00 0.00 43.37 2.44
5855 6355 6.710295 TGTTCAGAACAGCAATCTAGCTTAAA 59.290 34.615 12.24 0.00 43.70 1.52
5887 6388 4.822026 CCTACAGTCAACTAAGGAAGGTG 58.178 47.826 5.24 0.00 45.03 4.00
5888 6389 3.261137 GCCTACAGTCAACTAAGGAAGGT 59.739 47.826 12.62 0.00 32.75 3.50
5918 6419 2.424601 CCTACCGAAATACACCGTCAGA 59.575 50.000 0.00 0.00 0.00 3.27
5924 6425 3.851458 AATCCCCTACCGAAATACACC 57.149 47.619 0.00 0.00 0.00 4.16
5933 6434 5.548406 CTGGTAAATCTAAATCCCCTACCG 58.452 45.833 0.00 0.00 31.80 4.02
6030 6537 2.023223 CATGGCAAACAAGCACCGC 61.023 57.895 0.00 0.00 35.83 5.68
6032 6539 1.273048 TCATCATGGCAAACAAGCACC 59.727 47.619 0.00 0.00 35.83 5.01
6052 6559 0.246086 CAGGCTCTCTCGACAAAGCT 59.754 55.000 7.78 0.00 35.12 3.74
6058 6565 1.333619 GAGACATCAGGCTCTCTCGAC 59.666 57.143 0.00 0.00 31.74 4.20
6060 6567 1.387539 TGAGACATCAGGCTCTCTCG 58.612 55.000 0.00 0.00 34.99 4.04
6084 6591 6.999950 TCCAACTGCTCTAACATTTACACTA 58.000 36.000 0.00 0.00 0.00 2.74
6099 6606 2.306847 ACAAAACCGAATCCAACTGCT 58.693 42.857 0.00 0.00 0.00 4.24
6102 6609 5.358725 AGTTGTAACAAAACCGAATCCAACT 59.641 36.000 0.00 0.00 36.20 3.16
6140 6647 7.062749 ACATCAGTGAAACCAGAGTAAGTAA 57.937 36.000 0.00 0.00 37.80 2.24
6141 6648 6.665992 ACATCAGTGAAACCAGAGTAAGTA 57.334 37.500 0.00 0.00 37.80 2.24
6189 6859 4.177165 TGCATAGCATTTGTCAACCAAG 57.823 40.909 0.00 0.00 31.15 3.61
6261 6993 1.869574 CGACACATGAGGCGACGAG 60.870 63.158 13.63 0.00 0.00 4.18
6263 6995 1.282248 AAACGACACATGAGGCGACG 61.282 55.000 25.58 11.61 0.00 5.12
6288 7020 2.730550 TTTCGAACGGAGGAAGTACC 57.269 50.000 0.00 0.00 39.35 3.34
6294 7026 4.327898 CGACAAATATTTTCGAACGGAGGA 59.672 41.667 19.29 0.00 34.62 3.71
6295 7027 4.493545 CCGACAAATATTTTCGAACGGAGG 60.494 45.833 22.84 7.80 40.16 4.30
6298 7030 4.143073 TGTCCGACAAATATTTTCGAACGG 60.143 41.667 22.84 19.26 39.30 4.44
6411 7143 2.993853 CAGGAGGAGGCTTGACCC 59.006 66.667 0.00 0.00 40.58 4.46
6456 7188 2.554462 CTCTTCTTGGTCTGTCGTCAGA 59.446 50.000 8.34 8.34 46.85 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.