Multiple sequence alignment - TraesCS2A01G490300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G490300 chr2A 100.000 6580 0 0 1 6580 723825107 723831686 0.000000e+00 12152.0
1 TraesCS2A01G490300 chr2A 88.939 669 37 12 584 1225 691568552 691569210 0.000000e+00 791.0
2 TraesCS2A01G490300 chr2A 85.278 360 20 7 5500 5857 723848070 723848398 2.270000e-89 340.0
3 TraesCS2A01G490300 chr2A 95.327 214 5 3 5854 6064 723848332 723848543 1.060000e-87 335.0
4 TraesCS2A01G490300 chr2A 89.177 231 15 5 316 544 691568345 691568567 5.020000e-71 279.0
5 TraesCS2A01G490300 chr2A 92.308 169 11 2 6411 6579 723848638 723848804 8.530000e-59 239.0
6 TraesCS2A01G490300 chr2A 90.909 154 10 3 5356 5506 723836726 723836878 3.110000e-48 204.0
7 TraesCS2A01G490300 chr2A 79.661 118 16 3 6178 6295 597850030 597850139 1.970000e-10 78.7
8 TraesCS2A01G490300 chr2D 93.404 2456 102 37 3760 6181 589503988 589506417 0.000000e+00 3583.0
9 TraesCS2A01G490300 chr2D 90.240 1957 164 13 1813 3762 589502011 589503947 0.000000e+00 2531.0
10 TraesCS2A01G490300 chr2D 87.752 1290 69 27 586 1815 589500472 589501732 0.000000e+00 1424.0
11 TraesCS2A01G490300 chr2D 79.493 907 139 30 2327 3212 13771295 13770415 9.440000e-168 601.0
12 TraesCS2A01G490300 chr2D 84.490 490 34 11 46 533 589500020 589500469 4.680000e-121 446.0
13 TraesCS2A01G490300 chr2D 86.824 296 27 10 6290 6579 589506413 589506702 2.960000e-83 320.0
14 TraesCS2A01G490300 chr2D 78.992 119 17 2 6177 6295 87802566 87802676 2.540000e-09 75.0
15 TraesCS2A01G490300 chr2B 94.201 1966 81 15 1878 3827 713693581 713695529 0.000000e+00 2968.0
16 TraesCS2A01G490300 chr2B 90.744 2204 105 44 3930 6083 713695958 713698112 0.000000e+00 2848.0
17 TraesCS2A01G490300 chr2B 91.819 1259 63 15 614 1840 713692327 713693577 0.000000e+00 1718.0
18 TraesCS2A01G490300 chr2B 83.099 426 38 19 73 483 713691898 713692304 2.260000e-94 357.0
19 TraesCS2A01G490300 chr2B 81.315 289 24 11 6294 6579 713698167 713698428 2.400000e-49 207.0
20 TraesCS2A01G490300 chr2B 94.495 109 2 2 3826 3931 713695691 713695798 1.470000e-36 165.0
21 TraesCS2A01G490300 chr2B 80.870 115 10 8 6177 6289 672918340 672918236 5.470000e-11 80.5
22 TraesCS2A01G490300 chr2B 97.561 41 1 0 499 539 713692303 713692343 3.290000e-08 71.3
23 TraesCS2A01G490300 chr4A 91.458 1955 149 12 1815 3762 684978701 684976758 0.000000e+00 2669.0
24 TraesCS2A01G490300 chr4A 90.088 1695 84 36 4350 6009 684976113 684974468 0.000000e+00 2122.0
25 TraesCS2A01G490300 chr4A 93.695 904 39 8 925 1815 684979878 684978980 0.000000e+00 1338.0
26 TraesCS2A01G490300 chr4A 83.633 1002 156 7 2315 3309 602864252 602863252 0.000000e+00 935.0
27 TraesCS2A01G490300 chr4A 84.902 914 116 11 2682 3590 602260793 602259897 0.000000e+00 904.0
28 TraesCS2A01G490300 chr4A 89.460 389 25 9 3974 4352 684976576 684976194 1.660000e-130 477.0
29 TraesCS2A01G490300 chr4A 85.672 335 21 11 227 542 684980545 684980219 1.770000e-85 327.0
30 TraesCS2A01G490300 chr4A 82.521 349 61 0 2313 2661 602261189 602260841 2.300000e-79 307.0
31 TraesCS2A01G490300 chr4A 83.388 307 32 9 627 920 684980213 684979913 3.910000e-67 267.0
32 TraesCS2A01G490300 chr4A 82.943 299 28 12 3355 3648 602863235 602862955 1.420000e-61 248.0
33 TraesCS2A01G490300 chr4A 87.500 120 7 6 3761 3880 684976716 684976605 1.490000e-26 132.0
34 TraesCS2A01G490300 chr4A 97.222 36 0 1 3835 3870 684976609 684976575 7.130000e-05 60.2
35 TraesCS2A01G490300 chr4B 83.556 1350 190 20 2313 3648 3785997 3784666 0.000000e+00 1234.0
36 TraesCS2A01G490300 chr4B 82.391 778 113 14 2893 3669 3855614 3856368 0.000000e+00 656.0
37 TraesCS2A01G490300 chr4D 82.579 1303 174 31 2315 3581 3259649 3260934 0.000000e+00 1099.0
38 TraesCS2A01G490300 chr4D 83.247 1164 163 21 2314 3469 2072102 2070963 0.000000e+00 1040.0
39 TraesCS2A01G490300 chr4D 90.000 90 5 2 3584 3669 3261020 3261109 5.390000e-21 113.0
40 TraesCS2A01G490300 chr6A 88.191 669 46 15 584 1225 36679639 36680301 0.000000e+00 767.0
41 TraesCS2A01G490300 chr6A 88.191 669 41 15 584 1225 584585253 584585910 0.000000e+00 763.0
42 TraesCS2A01G490300 chr6A 87.294 669 42 15 584 1225 64724594 64723942 0.000000e+00 725.0
43 TraesCS2A01G490300 chr6A 89.177 231 15 4 316 544 36679432 36679654 5.020000e-71 279.0
44 TraesCS2A01G490300 chr6A 87.879 231 18 4 316 544 64724801 64724579 5.060000e-66 263.0
45 TraesCS2A01G490300 chr6A 87.013 231 20 4 316 544 584585046 584585268 1.100000e-62 252.0
46 TraesCS2A01G490300 chr1A 86.846 669 51 13 584 1225 573145562 573146220 0.000000e+00 713.0
47 TraesCS2A01G490300 chr1A 88.261 230 17 5 317 544 573145356 573145577 3.910000e-67 267.0
48 TraesCS2A01G490300 chr3A 78.578 1125 163 40 2345 3448 663440739 663441806 0.000000e+00 671.0
49 TraesCS2A01G490300 chr5D 84.301 637 94 4 2517 3148 438553207 438553842 9.370000e-173 617.0
50 TraesCS2A01G490300 chr5D 81.659 229 24 6 3531 3759 438554782 438554992 2.440000e-39 174.0
51 TraesCS2A01G490300 chr5D 84.831 178 13 11 5425 5599 532281101 532280935 4.080000e-37 167.0
52 TraesCS2A01G490300 chr7D 77.148 1129 199 31 2331 3434 48823801 48824895 9.440000e-168 601.0
53 TraesCS2A01G490300 chr7D 83.478 115 11 3 6178 6292 433715268 433715374 4.200000e-17 100.0
54 TraesCS2A01G490300 chr5B 84.925 199 22 3 3561 3759 533386666 533386856 1.870000e-45 195.0
55 TraesCS2A01G490300 chr5B 80.702 171 26 5 5393 5558 672433937 672433769 6.930000e-25 126.0
56 TraesCS2A01G490300 chr5B 80.702 171 26 5 5393 5558 672467352 672467184 6.930000e-25 126.0
57 TraesCS2A01G490300 chr5B 84.298 121 11 4 6177 6297 133081639 133081527 1.940000e-20 111.0
58 TraesCS2A01G490300 chrUn 82.456 228 28 6 2089 2305 47774723 47774949 8.710000e-44 189.0
59 TraesCS2A01G490300 chrUn 80.702 171 26 5 5393 5558 248996129 248996297 6.930000e-25 126.0
60 TraesCS2A01G490300 chrUn 80.702 171 26 5 5393 5558 332781646 332781478 6.930000e-25 126.0
61 TraesCS2A01G490300 chr7B 79.832 119 16 3 6178 6296 206507395 206507505 5.470000e-11 80.5
62 TraesCS2A01G490300 chr1B 78.992 119 17 4 6177 6295 125184509 125184399 2.540000e-09 75.0
63 TraesCS2A01G490300 chr1B 97.222 36 1 0 6177 6212 95316208 95316243 1.980000e-05 62.1
64 TraesCS2A01G490300 chr1B 100.000 33 0 0 6180 6212 534165571 534165603 1.980000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G490300 chr2A 723825107 723831686 6579 False 12152.000000 12152 100.000000 1 6580 1 chr2A.!!$F2 6579
1 TraesCS2A01G490300 chr2A 691568345 691569210 865 False 535.000000 791 89.058000 316 1225 2 chr2A.!!$F4 909
2 TraesCS2A01G490300 chr2A 723848070 723848804 734 False 304.666667 340 90.971000 5500 6579 3 chr2A.!!$F5 1079
3 TraesCS2A01G490300 chr2D 589500020 589506702 6682 False 1660.800000 3583 88.542000 46 6579 5 chr2D.!!$F2 6533
4 TraesCS2A01G490300 chr2D 13770415 13771295 880 True 601.000000 601 79.493000 2327 3212 1 chr2D.!!$R1 885
5 TraesCS2A01G490300 chr2B 713691898 713698428 6530 False 1190.614286 2968 90.462000 73 6579 7 chr2B.!!$F1 6506
6 TraesCS2A01G490300 chr4A 684974468 684980545 6077 True 924.025000 2669 89.810375 227 6009 8 chr4A.!!$R3 5782
7 TraesCS2A01G490300 chr4A 602259897 602261189 1292 True 605.500000 904 83.711500 2313 3590 2 chr4A.!!$R1 1277
8 TraesCS2A01G490300 chr4A 602862955 602864252 1297 True 591.500000 935 83.288000 2315 3648 2 chr4A.!!$R2 1333
9 TraesCS2A01G490300 chr4B 3784666 3785997 1331 True 1234.000000 1234 83.556000 2313 3648 1 chr4B.!!$R1 1335
10 TraesCS2A01G490300 chr4B 3855614 3856368 754 False 656.000000 656 82.391000 2893 3669 1 chr4B.!!$F1 776
11 TraesCS2A01G490300 chr4D 2070963 2072102 1139 True 1040.000000 1040 83.247000 2314 3469 1 chr4D.!!$R1 1155
12 TraesCS2A01G490300 chr4D 3259649 3261109 1460 False 606.000000 1099 86.289500 2315 3669 2 chr4D.!!$F1 1354
13 TraesCS2A01G490300 chr6A 36679432 36680301 869 False 523.000000 767 88.684000 316 1225 2 chr6A.!!$F1 909
14 TraesCS2A01G490300 chr6A 584585046 584585910 864 False 507.500000 763 87.602000 316 1225 2 chr6A.!!$F2 909
15 TraesCS2A01G490300 chr6A 64723942 64724801 859 True 494.000000 725 87.586500 316 1225 2 chr6A.!!$R1 909
16 TraesCS2A01G490300 chr1A 573145356 573146220 864 False 490.000000 713 87.553500 317 1225 2 chr1A.!!$F1 908
17 TraesCS2A01G490300 chr3A 663440739 663441806 1067 False 671.000000 671 78.578000 2345 3448 1 chr3A.!!$F1 1103
18 TraesCS2A01G490300 chr5D 438553207 438554992 1785 False 395.500000 617 82.980000 2517 3759 2 chr5D.!!$F1 1242
19 TraesCS2A01G490300 chr7D 48823801 48824895 1094 False 601.000000 601 77.148000 2331 3434 1 chr7D.!!$F1 1103

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
136 137 1.048724 TCTGCGCTGCTTATACCCCT 61.049 55.000 9.73 0.00 0.00 4.79 F
364 389 1.152355 CCCTCCTAGGCTCCTCCTG 60.152 68.421 2.96 0.00 46.98 3.86 F
1647 1758 0.179121 CTGTAATGCCTCGCGTGGTA 60.179 55.000 26.41 23.35 0.00 3.25 F
2473 2908 0.671781 GCACTCTCGTTGATGTGGCT 60.672 55.000 0.00 0.00 0.00 4.75 F
3301 3799 0.326264 GGATGGTGAAGTGGTGCTCT 59.674 55.000 0.00 0.00 0.00 4.09 F
4871 6736 1.454653 GCGTCACTCGAACAGGTAAAC 59.545 52.381 0.00 0.00 42.86 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1573 1683 3.420893 CTCAATTGGGCTCACAGGTTAA 58.579 45.455 5.42 0.0 0.00 2.01 R
2113 2539 3.521126 ACAGGGAGCAAGATACTGACAAT 59.479 43.478 0.00 0.0 33.57 2.71 R
3093 3585 0.254178 GCAGGGCTTTCATGAGGAGA 59.746 55.000 11.20 0.0 0.00 3.71 R
4202 5954 0.880278 TGCTGACTCAAAGGTGCGAC 60.880 55.000 0.00 0.0 0.00 5.19 R
4877 6742 1.131638 AGGTCCACAGACAAGCTTCA 58.868 50.000 0.00 0.0 45.48 3.02 R
6233 8166 0.244721 GACAACATGGAAAGCAGCCC 59.755 55.000 0.00 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 1.446272 CGGAGAACCAGACTTCGGC 60.446 63.158 0.00 0.00 33.34 5.54
68 69 3.330720 ACTTCGGCCCCTCCCTTG 61.331 66.667 0.00 0.00 0.00 3.61
70 71 3.327404 TTCGGCCCCTCCCTTGTC 61.327 66.667 0.00 0.00 0.00 3.18
112 113 3.083349 TCAGTCCATCCCAGGCCG 61.083 66.667 0.00 0.00 0.00 6.13
130 131 2.614581 GCATCTCTGCGCTGCTTAT 58.385 52.632 9.73 0.00 38.92 1.73
136 137 1.048724 TCTGCGCTGCTTATACCCCT 61.049 55.000 9.73 0.00 0.00 4.79
138 139 1.276421 CTGCGCTGCTTATACCCCTAT 59.724 52.381 9.73 0.00 0.00 2.57
142 143 3.933332 GCGCTGCTTATACCCCTATAAAG 59.067 47.826 0.00 0.00 0.00 1.85
145 146 6.228258 CGCTGCTTATACCCCTATAAAGAAA 58.772 40.000 0.00 0.00 0.00 2.52
146 147 6.147328 CGCTGCTTATACCCCTATAAAGAAAC 59.853 42.308 0.00 0.00 0.00 2.78
148 149 7.665974 GCTGCTTATACCCCTATAAAGAAACAT 59.334 37.037 0.00 0.00 0.00 2.71
149 150 9.220767 CTGCTTATACCCCTATAAAGAAACATC 57.779 37.037 0.00 0.00 0.00 3.06
150 151 8.945193 TGCTTATACCCCTATAAAGAAACATCT 58.055 33.333 0.00 0.00 0.00 2.90
151 152 9.220767 GCTTATACCCCTATAAAGAAACATCTG 57.779 37.037 0.00 0.00 0.00 2.90
154 155 8.980481 ATACCCCTATAAAGAAACATCTGTTG 57.020 34.615 0.00 0.00 38.44 3.33
155 156 5.652452 ACCCCTATAAAGAAACATCTGTTGC 59.348 40.000 0.00 0.00 38.44 4.17
156 157 5.888161 CCCCTATAAAGAAACATCTGTTGCT 59.112 40.000 0.00 0.00 45.58 3.91
223 224 4.541648 CGTCTCCCCGGGGATCCT 62.542 72.222 42.44 0.00 44.24 3.24
292 308 3.971702 GGAAGGGCTGCCACCACT 61.972 66.667 22.05 5.07 0.00 4.00
353 378 3.352748 TCCTCGGCACCCCTCCTA 61.353 66.667 0.00 0.00 0.00 2.94
355 380 2.840102 CTCGGCACCCCTCCTAGG 60.840 72.222 0.82 0.82 34.30 3.02
358 383 3.164977 GGCACCCCTCCTAGGCTC 61.165 72.222 2.96 0.00 32.73 4.70
359 384 3.164977 GCACCCCTCCTAGGCTCC 61.165 72.222 2.96 0.00 32.73 4.70
360 385 2.699496 CACCCCTCCTAGGCTCCT 59.301 66.667 2.96 0.00 32.73 3.69
361 386 1.458588 CACCCCTCCTAGGCTCCTC 60.459 68.421 2.96 0.00 32.73 3.71
362 387 2.202899 CCCCTCCTAGGCTCCTCC 59.797 72.222 2.96 0.00 32.73 4.30
364 389 1.152355 CCCTCCTAGGCTCCTCCTG 60.152 68.421 2.96 0.00 46.98 3.86
414 446 2.213499 CTCCCTTGATTCCGATTTCCG 58.787 52.381 0.00 0.00 38.18 4.30
542 581 4.084013 CCGTATTAGGGTTCAATTCGATGC 60.084 45.833 0.00 0.00 30.53 3.91
543 582 4.509970 CGTATTAGGGTTCAATTCGATGCA 59.490 41.667 0.00 0.00 30.53 3.96
544 583 5.179368 CGTATTAGGGTTCAATTCGATGCAT 59.821 40.000 0.00 0.00 30.53 3.96
545 584 5.695851 ATTAGGGTTCAATTCGATGCATC 57.304 39.130 17.10 17.10 0.00 3.91
546 585 3.287867 AGGGTTCAATTCGATGCATCT 57.712 42.857 23.73 2.95 0.00 2.90
547 586 4.422073 AGGGTTCAATTCGATGCATCTA 57.578 40.909 23.73 11.14 0.00 1.98
548 587 4.384056 AGGGTTCAATTCGATGCATCTAG 58.616 43.478 23.73 10.00 0.00 2.43
549 588 4.101585 AGGGTTCAATTCGATGCATCTAGA 59.898 41.667 23.73 12.22 0.00 2.43
550 589 4.816385 GGGTTCAATTCGATGCATCTAGAA 59.184 41.667 23.73 19.62 0.00 2.10
551 590 5.296780 GGGTTCAATTCGATGCATCTAGAAA 59.703 40.000 23.73 12.82 0.00 2.52
552 591 6.183360 GGGTTCAATTCGATGCATCTAGAAAA 60.183 38.462 23.73 9.69 0.00 2.29
553 592 7.250569 GGTTCAATTCGATGCATCTAGAAAAA 58.749 34.615 23.73 13.06 0.00 1.94
574 613 5.649782 AAAAGGTTCAATTCGATGCATCT 57.350 34.783 23.73 2.95 0.00 2.90
575 614 6.757897 AAAAGGTTCAATTCGATGCATCTA 57.242 33.333 23.73 11.14 0.00 1.98
576 615 6.757897 AAAGGTTCAATTCGATGCATCTAA 57.242 33.333 23.73 19.43 0.00 2.10
577 616 6.757897 AAGGTTCAATTCGATGCATCTAAA 57.242 33.333 23.73 17.40 0.00 1.85
578 617 6.757897 AGGTTCAATTCGATGCATCTAAAA 57.242 33.333 23.73 15.09 0.00 1.52
579 618 7.156876 AGGTTCAATTCGATGCATCTAAAAA 57.843 32.000 23.73 12.82 0.00 1.94
643 686 5.983118 GGTTCAATTCATTCGGTTCAGTTTT 59.017 36.000 0.00 0.00 0.00 2.43
653 696 5.957842 TCGGTTCAGTTTTATTGCAATCT 57.042 34.783 16.86 3.66 0.00 2.40
713 762 5.941733 TGTGTTGTTTTGCTATGCTCTATG 58.058 37.500 0.00 0.00 0.00 2.23
734 788 9.056005 TCTATGGATTTTGATTTATGGTTCGAG 57.944 33.333 0.00 0.00 0.00 4.04
781 839 7.888021 TGTCCCATACTTCTTTTTATGTCACAT 59.112 33.333 0.00 0.00 0.00 3.21
835 896 5.656859 GGTTAATTTTCAGCCTAGGGATGTT 59.343 40.000 11.72 0.00 40.37 2.71
846 907 5.888161 AGCCTAGGGATGTTTATTGTTTCAG 59.112 40.000 11.72 0.00 0.00 3.02
855 916 8.134895 GGATGTTTATTGTTTCAGTGAGTCAAA 58.865 33.333 13.35 0.69 0.00 2.69
921 992 2.525891 CACGTTTTGTTCGCTTTGTCAG 59.474 45.455 0.00 0.00 0.00 3.51
971 1065 5.348164 TGTACATGTGATGATTCGTAGGTG 58.652 41.667 9.11 0.00 0.00 4.00
1523 1633 9.762381 AAACCCAGGTTTGTAAAATCATATAGA 57.238 29.630 13.94 0.00 45.34 1.98
1573 1683 5.867903 TTCCATGTTTCCTCATTGTTGTT 57.132 34.783 0.00 0.00 0.00 2.83
1593 1703 3.517296 TTAACCTGTGAGCCCAATTGA 57.483 42.857 7.12 0.00 0.00 2.57
1647 1758 0.179121 CTGTAATGCCTCGCGTGGTA 60.179 55.000 26.41 23.35 0.00 3.25
1752 1890 3.829601 TGATTTGTGGGTATTGGGTGTTC 59.170 43.478 0.00 0.00 0.00 3.18
1796 1934 6.832520 TGTTCTTTATGCTGCTATTTTCCA 57.167 33.333 0.00 0.00 0.00 3.53
1836 2255 7.633789 ACAGACCTTACCAATCAATTAGATGT 58.366 34.615 0.00 0.00 36.96 3.06
1876 2295 8.994429 AGTCAGAATACAGAAAATGTACTCAG 57.006 34.615 0.00 0.00 47.00 3.35
2113 2539 0.687354 GGGGAAGCTGAACTGAGACA 59.313 55.000 0.00 0.00 0.00 3.41
2155 2581 4.605968 TGTTTCATTTGTGTTGGATGTCG 58.394 39.130 0.00 0.00 0.00 4.35
2294 2723 2.450476 GATGGATATGATTGGGGTGCC 58.550 52.381 0.00 0.00 0.00 5.01
2431 2863 3.449227 CTCCTGTACCGCGCCTCA 61.449 66.667 0.00 0.00 0.00 3.86
2473 2908 0.671781 GCACTCTCGTTGATGTGGCT 60.672 55.000 0.00 0.00 0.00 4.75
3024 3516 2.424302 CGGTGACCGGAACAGGTT 59.576 61.111 17.80 0.00 46.09 3.50
3188 3680 1.827399 GAAGAAGCCCACCGTCTCCA 61.827 60.000 0.00 0.00 30.68 3.86
3234 3726 4.521062 AGCTCGCTCGGATGGTGC 62.521 66.667 0.00 0.00 0.00 5.01
3235 3727 4.819761 GCTCGCTCGGATGGTGCA 62.820 66.667 0.00 0.00 34.86 4.57
3236 3728 2.584418 CTCGCTCGGATGGTGCAG 60.584 66.667 0.00 0.00 34.86 4.41
3301 3799 0.326264 GGATGGTGAAGTGGTGCTCT 59.674 55.000 0.00 0.00 0.00 4.09
3712 5079 4.039245 CCTATCAAAGACCAGGCTCGAATA 59.961 45.833 0.00 0.00 0.00 1.75
3713 5080 3.526931 TCAAAGACCAGGCTCGAATAG 57.473 47.619 0.00 0.00 0.00 1.73
3715 5082 2.932614 CAAAGACCAGGCTCGAATAGTG 59.067 50.000 0.00 0.00 0.00 2.74
3827 5248 8.123575 CCGCTGTGCTGTATTACTATATACTAG 58.876 40.741 0.00 0.00 33.19 2.57
3828 5249 8.123575 CGCTGTGCTGTATTACTATATACTAGG 58.876 40.741 0.00 0.00 33.19 3.02
3829 5250 9.175312 GCTGTGCTGTATTACTATATACTAGGA 57.825 37.037 0.00 0.00 33.19 2.94
3880 5466 3.009473 ACCAGCACATGACTAGGACAATT 59.991 43.478 0.00 0.00 0.00 2.32
4017 5765 8.097038 TGAGTATTGCAAAAGATGAGTAACTCT 58.903 33.333 1.71 0.00 32.78 3.24
4036 5784 5.109903 ACTCTTAAGTCCACGTATGAATGC 58.890 41.667 1.63 0.00 0.00 3.56
4044 5792 7.391148 AGTCCACGTATGAATGCTTTATTTT 57.609 32.000 0.00 0.00 0.00 1.82
4069 5817 2.106857 AGGTGGTTCGGTTTGGTCATTA 59.893 45.455 0.00 0.00 0.00 1.90
4097 5845 9.591404 CTCATTTATCATCGATAAGCTGTTTTC 57.409 33.333 0.00 0.00 36.15 2.29
4106 5854 5.575606 TCGATAAGCTGTTTTCTTAGTTCGG 59.424 40.000 0.00 0.00 33.15 4.30
4109 5858 7.222224 CGATAAGCTGTTTTCTTAGTTCGGTAT 59.778 37.037 0.00 0.00 30.77 2.73
4113 5862 8.611654 AGCTGTTTTCTTAGTTCGGTATAAAA 57.388 30.769 0.00 0.00 0.00 1.52
4137 5886 7.986085 AAATCTGTCCATATAAAATAGCGCT 57.014 32.000 17.26 17.26 0.00 5.92
4139 5888 7.986085 ATCTGTCCATATAAAATAGCGCTTT 57.014 32.000 18.68 4.25 0.00 3.51
4140 5889 9.502091 AATCTGTCCATATAAAATAGCGCTTTA 57.498 29.630 18.68 9.17 0.00 1.85
4141 5890 9.672673 ATCTGTCCATATAAAATAGCGCTTTAT 57.327 29.630 18.68 16.41 34.25 1.40
4398 6249 4.829064 TCAGAAAACCTGTTGTATGTGC 57.171 40.909 0.00 0.00 43.38 4.57
4428 6290 6.494893 TTAGATTTTGGTCTCATGTTTCCG 57.505 37.500 0.00 0.00 0.00 4.30
4477 6339 5.311265 TGACTCATCACTTGCTTGATCTTT 58.689 37.500 0.00 0.00 33.74 2.52
4614 6477 4.764679 TGCTCAGTTTATCGCACAAAAT 57.235 36.364 0.00 0.00 0.00 1.82
4751 6615 8.549338 AGTACCTGCAAACTCTATTTTAAGTC 57.451 34.615 0.00 0.00 0.00 3.01
4871 6736 1.454653 GCGTCACTCGAACAGGTAAAC 59.545 52.381 0.00 0.00 42.86 2.01
4877 6742 6.492254 GTCACTCGAACAGGTAAACAAATTT 58.508 36.000 0.00 0.00 0.00 1.82
4960 6825 8.196771 GCTGGTTATTTCATTGGTTTATCATCA 58.803 33.333 0.00 0.00 0.00 3.07
5076 6948 0.234884 CGCAGGTTCAGAAACGGTTC 59.765 55.000 4.63 4.63 36.16 3.62
5239 7111 2.620779 GGCTTCTTCGCCTTTTCTTC 57.379 50.000 0.00 0.00 46.63 2.87
5240 7112 1.880027 GGCTTCTTCGCCTTTTCTTCA 59.120 47.619 0.00 0.00 46.63 3.02
5329 7201 9.938670 GAGAAAAGAAGAAAGAAAAGAAGGTAC 57.061 33.333 0.00 0.00 0.00 3.34
5333 7205 9.462606 AAAGAAGAAAGAAAAGAAGGTACAAGA 57.537 29.630 0.00 0.00 0.00 3.02
5343 7215 9.237846 GAAAAGAAGGTACAAGAACAATCTTTG 57.762 33.333 0.00 0.00 43.43 2.77
5349 7221 6.772716 AGGTACAAGAACAATCTTTGATGTGT 59.227 34.615 0.00 0.00 43.43 3.72
5350 7222 6.857964 GGTACAAGAACAATCTTTGATGTGTG 59.142 38.462 0.00 0.00 43.43 3.82
5351 7223 6.455360 ACAAGAACAATCTTTGATGTGTGT 57.545 33.333 0.00 0.00 43.43 3.72
5352 7224 6.267817 ACAAGAACAATCTTTGATGTGTGTG 58.732 36.000 0.00 0.00 43.43 3.82
5353 7225 6.127647 ACAAGAACAATCTTTGATGTGTGTGT 60.128 34.615 0.00 0.00 43.43 3.72
5354 7226 7.066887 ACAAGAACAATCTTTGATGTGTGTGTA 59.933 33.333 0.00 0.00 43.43 2.90
5450 7331 2.270352 TTGGGCTGTTGAGAATCGTT 57.730 45.000 0.00 0.00 38.61 3.85
5456 7340 4.215613 GGGCTGTTGAGAATCGTTAGTTTT 59.784 41.667 0.00 0.00 38.61 2.43
5616 7500 2.750888 GCGCCATTCCGTTGGTCTC 61.751 63.158 0.00 0.00 39.11 3.36
5655 7540 3.385384 TCGCTCTCTGCACCTGGG 61.385 66.667 0.00 0.00 43.06 4.45
5733 7639 0.447801 GTTGCAACCGCTACCTGATG 59.552 55.000 19.15 0.00 37.84 3.07
5743 7649 2.739609 CGCTACCTGATGAATGTCAGCA 60.740 50.000 0.00 0.00 40.87 4.41
5760 7666 3.126858 TCAGCAAAACGATACTTGATGCC 59.873 43.478 0.00 0.00 38.51 4.40
5867 7773 4.135306 AGATGCTGCTGTATCATTTGAGG 58.865 43.478 20.56 0.00 37.69 3.86
5981 7896 8.190122 CAGGCTGTTGTTTTATTCTTGCATATA 58.810 33.333 6.28 0.00 0.00 0.86
5982 7897 8.917088 AGGCTGTTGTTTTATTCTTGCATATAT 58.083 29.630 0.00 0.00 0.00 0.86
6092 8017 7.520119 AGACAATTTTCTTTCGGTTTTGTTC 57.480 32.000 0.00 0.00 0.00 3.18
6103 8028 4.190772 TCGGTTTTGTTCTCGTTACCTTT 58.809 39.130 0.00 0.00 0.00 3.11
6105 8030 4.521010 GGTTTTGTTCTCGTTACCTTTCG 58.479 43.478 0.00 0.00 0.00 3.46
6108 8033 1.068895 TGTTCTCGTTACCTTTCGGCA 59.931 47.619 0.00 0.00 0.00 5.69
6109 8034 1.458445 GTTCTCGTTACCTTTCGGCAC 59.542 52.381 0.00 0.00 0.00 5.01
6110 8035 0.675083 TCTCGTTACCTTTCGGCACA 59.325 50.000 0.00 0.00 0.00 4.57
6111 8036 1.274167 TCTCGTTACCTTTCGGCACAT 59.726 47.619 0.00 0.00 0.00 3.21
6113 8038 0.179200 CGTTACCTTTCGGCACATGC 60.179 55.000 0.00 0.00 41.14 4.06
6143 8076 5.983118 GTGAAAACTGGAATTCCGTGAAAAT 59.017 36.000 19.57 2.61 39.43 1.82
6162 8095 6.975772 TGAAAATCTGAAAACTGTAAAACGGG 59.024 34.615 0.00 0.00 0.00 5.28
6164 8097 3.215975 TCTGAAAACTGTAAAACGGGGG 58.784 45.455 0.00 0.00 0.00 5.40
6169 8102 1.058284 ACTGTAAAACGGGGGCACTA 58.942 50.000 0.00 0.00 0.00 2.74
6181 8114 3.056749 CGGGGGCACTAGATTGTAGATAC 60.057 52.174 0.00 0.00 0.00 2.24
6182 8115 4.161102 GGGGGCACTAGATTGTAGATACT 58.839 47.826 0.00 0.00 0.00 2.12
6183 8116 4.221041 GGGGGCACTAGATTGTAGATACTC 59.779 50.000 0.00 0.00 0.00 2.59
6184 8117 4.221041 GGGGCACTAGATTGTAGATACTCC 59.779 50.000 0.00 0.00 0.00 3.85
6185 8118 4.221041 GGGCACTAGATTGTAGATACTCCC 59.779 50.000 0.00 0.00 0.00 4.30
6186 8119 5.081032 GGCACTAGATTGTAGATACTCCCT 58.919 45.833 0.00 0.00 0.00 4.20
6187 8120 5.184287 GGCACTAGATTGTAGATACTCCCTC 59.816 48.000 0.00 0.00 0.00 4.30
6188 8121 5.184287 GCACTAGATTGTAGATACTCCCTCC 59.816 48.000 0.00 0.00 0.00 4.30
6189 8122 5.413213 CACTAGATTGTAGATACTCCCTCCG 59.587 48.000 0.00 0.00 0.00 4.63
6190 8123 4.456662 AGATTGTAGATACTCCCTCCGT 57.543 45.455 0.00 0.00 0.00 4.69
6191 8124 4.805744 AGATTGTAGATACTCCCTCCGTT 58.194 43.478 0.00 0.00 0.00 4.44
6192 8125 4.828387 AGATTGTAGATACTCCCTCCGTTC 59.172 45.833 0.00 0.00 0.00 3.95
6193 8126 3.657398 TGTAGATACTCCCTCCGTTCA 57.343 47.619 0.00 0.00 0.00 3.18
6194 8127 3.285484 TGTAGATACTCCCTCCGTTCAC 58.715 50.000 0.00 0.00 0.00 3.18
6195 8128 2.830651 AGATACTCCCTCCGTTCACT 57.169 50.000 0.00 0.00 0.00 3.41
6196 8129 3.103080 AGATACTCCCTCCGTTCACTT 57.897 47.619 0.00 0.00 0.00 3.16
6197 8130 3.442076 AGATACTCCCTCCGTTCACTTT 58.558 45.455 0.00 0.00 0.00 2.66
6198 8131 3.838903 AGATACTCCCTCCGTTCACTTTT 59.161 43.478 0.00 0.00 0.00 2.27
6199 8132 5.021458 AGATACTCCCTCCGTTCACTTTTA 58.979 41.667 0.00 0.00 0.00 1.52
6200 8133 5.661759 AGATACTCCCTCCGTTCACTTTTAT 59.338 40.000 0.00 0.00 0.00 1.40
6201 8134 6.837568 AGATACTCCCTCCGTTCACTTTTATA 59.162 38.462 0.00 0.00 0.00 0.98
6202 8135 5.750352 ACTCCCTCCGTTCACTTTTATAA 57.250 39.130 0.00 0.00 0.00 0.98
6203 8136 5.731591 ACTCCCTCCGTTCACTTTTATAAG 58.268 41.667 0.00 0.00 37.40 1.73
6204 8137 5.247792 ACTCCCTCCGTTCACTTTTATAAGT 59.752 40.000 0.00 0.00 45.40 2.24
6205 8138 6.117975 TCCCTCCGTTCACTTTTATAAGTT 57.882 37.500 0.00 0.00 41.85 2.66
6206 8139 5.935789 TCCCTCCGTTCACTTTTATAAGTTG 59.064 40.000 0.00 0.00 41.85 3.16
6207 8140 5.704053 CCCTCCGTTCACTTTTATAAGTTGT 59.296 40.000 0.00 0.00 41.85 3.32
6208 8141 6.206048 CCCTCCGTTCACTTTTATAAGTTGTT 59.794 38.462 0.00 0.00 41.85 2.83
6209 8142 7.255346 CCCTCCGTTCACTTTTATAAGTTGTTT 60.255 37.037 0.00 0.00 41.85 2.83
6210 8143 7.801783 CCTCCGTTCACTTTTATAAGTTGTTTC 59.198 37.037 0.00 0.00 41.85 2.78
6211 8144 8.211116 TCCGTTCACTTTTATAAGTTGTTTCA 57.789 30.769 0.00 0.00 41.85 2.69
6212 8145 8.124199 TCCGTTCACTTTTATAAGTTGTTTCAC 58.876 33.333 0.00 0.00 41.85 3.18
6213 8146 7.911205 CCGTTCACTTTTATAAGTTGTTTCACA 59.089 33.333 0.00 0.00 41.85 3.58
6214 8147 8.943925 CGTTCACTTTTATAAGTTGTTTCACAG 58.056 33.333 0.00 0.00 41.85 3.66
6215 8148 9.783256 GTTCACTTTTATAAGTTGTTTCACAGT 57.217 29.630 0.00 0.00 41.85 3.55
6222 8155 9.997482 TTTATAAGTTGTTTCACAGTTTCAGAC 57.003 29.630 0.00 0.00 0.00 3.51
6223 8156 5.957842 AAGTTGTTTCACAGTTTCAGACA 57.042 34.783 0.00 0.00 0.00 3.41
6224 8157 6.515272 AAGTTGTTTCACAGTTTCAGACAT 57.485 33.333 0.00 0.00 0.00 3.06
6225 8158 6.515272 AGTTGTTTCACAGTTTCAGACATT 57.485 33.333 0.00 0.00 0.00 2.71
6226 8159 6.924111 AGTTGTTTCACAGTTTCAGACATTT 58.076 32.000 0.00 0.00 0.00 2.32
6227 8160 6.808212 AGTTGTTTCACAGTTTCAGACATTTG 59.192 34.615 0.00 0.00 0.00 2.32
6228 8161 6.507958 TGTTTCACAGTTTCAGACATTTGA 57.492 33.333 0.00 0.00 0.00 2.69
6229 8162 6.918626 TGTTTCACAGTTTCAGACATTTGAA 58.081 32.000 0.00 0.00 35.38 2.69
6230 8163 7.374272 TGTTTCACAGTTTCAGACATTTGAAA 58.626 30.769 0.00 0.00 42.93 2.69
6231 8164 7.869937 TGTTTCACAGTTTCAGACATTTGAAAA 59.130 29.630 3.05 0.00 45.62 2.29
6232 8165 8.872845 GTTTCACAGTTTCAGACATTTGAAAAT 58.127 29.630 3.05 0.00 45.62 1.82
6243 8176 4.673534 CATTTGAAAATGGGCTGCTTTC 57.326 40.909 7.72 2.38 41.54 2.62
6244 8177 2.837532 TTGAAAATGGGCTGCTTTCC 57.162 45.000 0.00 0.00 0.00 3.13
6245 8178 1.714541 TGAAAATGGGCTGCTTTCCA 58.285 45.000 0.00 0.00 37.46 3.53
6246 8179 2.259012 TGAAAATGGGCTGCTTTCCAT 58.741 42.857 0.00 0.93 44.90 3.41
6247 8180 2.027929 TGAAAATGGGCTGCTTTCCATG 60.028 45.455 9.26 0.00 42.43 3.66
6248 8181 1.648116 AAATGGGCTGCTTTCCATGT 58.352 45.000 9.26 2.00 42.43 3.21
6249 8182 1.648116 AATGGGCTGCTTTCCATGTT 58.352 45.000 9.26 0.00 42.43 2.71
6250 8183 0.899720 ATGGGCTGCTTTCCATGTTG 59.100 50.000 7.93 0.00 41.75 3.33
6251 8184 0.469705 TGGGCTGCTTTCCATGTTGT 60.470 50.000 0.00 0.00 0.00 3.32
6252 8185 0.244721 GGGCTGCTTTCCATGTTGTC 59.755 55.000 0.00 0.00 0.00 3.18
6253 8186 1.251251 GGCTGCTTTCCATGTTGTCT 58.749 50.000 0.00 0.00 0.00 3.41
6254 8187 2.436417 GGCTGCTTTCCATGTTGTCTA 58.564 47.619 0.00 0.00 0.00 2.59
6255 8188 2.819608 GGCTGCTTTCCATGTTGTCTAA 59.180 45.455 0.00 0.00 0.00 2.10
6256 8189 3.255642 GGCTGCTTTCCATGTTGTCTAAA 59.744 43.478 0.00 0.00 0.00 1.85
6257 8190 4.261994 GGCTGCTTTCCATGTTGTCTAAAA 60.262 41.667 0.00 0.00 0.00 1.52
6258 8191 5.473039 GCTGCTTTCCATGTTGTCTAAAAT 58.527 37.500 0.00 0.00 0.00 1.82
6259 8192 5.346822 GCTGCTTTCCATGTTGTCTAAAATG 59.653 40.000 0.00 0.00 32.31 2.32
6260 8193 6.403866 TGCTTTCCATGTTGTCTAAAATGT 57.596 33.333 0.00 0.00 30.82 2.71
6261 8194 6.446318 TGCTTTCCATGTTGTCTAAAATGTC 58.554 36.000 0.00 0.00 30.82 3.06
6262 8195 6.265196 TGCTTTCCATGTTGTCTAAAATGTCT 59.735 34.615 0.00 0.00 30.82 3.41
6263 8196 7.147976 GCTTTCCATGTTGTCTAAAATGTCTT 58.852 34.615 0.00 0.00 30.82 3.01
6264 8197 7.327032 GCTTTCCATGTTGTCTAAAATGTCTTC 59.673 37.037 0.00 0.00 30.82 2.87
6265 8198 7.815840 TTCCATGTTGTCTAAAATGTCTTCA 57.184 32.000 0.00 0.00 30.82 3.02
6266 8199 7.815840 TCCATGTTGTCTAAAATGTCTTCAA 57.184 32.000 0.00 0.00 30.82 2.69
6267 8200 7.648142 TCCATGTTGTCTAAAATGTCTTCAAC 58.352 34.615 0.00 0.00 30.82 3.18
6268 8201 6.578545 CCATGTTGTCTAAAATGTCTTCAACG 59.421 38.462 0.00 0.00 37.20 4.10
6269 8202 6.671614 TGTTGTCTAAAATGTCTTCAACGT 57.328 33.333 0.00 0.00 37.20 3.99
6270 8203 7.773864 TGTTGTCTAAAATGTCTTCAACGTA 57.226 32.000 0.00 0.00 37.20 3.57
6271 8204 8.373048 TGTTGTCTAAAATGTCTTCAACGTAT 57.627 30.769 0.00 0.00 37.20 3.06
6272 8205 8.832521 TGTTGTCTAAAATGTCTTCAACGTATT 58.167 29.630 0.00 0.00 37.20 1.89
6290 8223 9.337091 CAACGTATTATAAAAGTGAACAAAGGG 57.663 33.333 0.00 0.00 0.00 3.95
6291 8224 8.851541 ACGTATTATAAAAGTGAACAAAGGGA 57.148 30.769 0.00 0.00 0.00 4.20
6292 8225 8.943002 ACGTATTATAAAAGTGAACAAAGGGAG 58.057 33.333 0.00 0.00 0.00 4.30
6293 8226 8.943002 CGTATTATAAAAGTGAACAAAGGGAGT 58.057 33.333 0.00 0.00 0.00 3.85
6306 8239 4.141914 ACAAAGGGAGTAGATGAATCGGAC 60.142 45.833 0.00 0.00 0.00 4.79
6318 8251 2.965831 TGAATCGGACTAAGAGATGGGG 59.034 50.000 0.00 0.00 0.00 4.96
6379 8312 1.194781 TCTCTCCCTTGACCTGTGCC 61.195 60.000 0.00 0.00 0.00 5.01
6414 8351 2.131023 CAGCCCCTTCTTCCTTAGGAT 58.869 52.381 0.12 0.00 33.13 3.24
6416 8353 2.511637 AGCCCCTTCTTCCTTAGGATTG 59.488 50.000 0.12 0.00 33.13 2.67
6427 8364 8.609617 TCTTCCTTAGGATTGTTTCTATGAGA 57.390 34.615 0.12 0.00 0.00 3.27
6524 8466 7.696992 TGTGGGATTTCTTTATTTCTACACC 57.303 36.000 0.00 0.00 0.00 4.16
6579 8521 8.133627 GCTGTTTCATTTGCATTGATATAGTCT 58.866 33.333 12.28 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.837371 GAAGTCTGGTTCTCCGGCGG 62.837 65.000 22.51 22.51 39.81 6.13
37 38 1.446272 GAAGTCTGGTTCTCCGGCG 60.446 63.158 0.00 0.00 39.81 6.46
38 39 1.446272 CGAAGTCTGGTTCTCCGGC 60.446 63.158 0.00 0.00 39.81 6.13
39 40 1.215647 CCGAAGTCTGGTTCTCCGG 59.784 63.158 0.00 0.00 41.27 5.14
40 41 1.446272 GCCGAAGTCTGGTTCTCCG 60.446 63.158 0.00 0.00 36.30 4.63
41 42 1.079057 GGCCGAAGTCTGGTTCTCC 60.079 63.158 0.00 0.00 0.00 3.71
42 43 1.079057 GGGCCGAAGTCTGGTTCTC 60.079 63.158 0.00 0.00 0.00 2.87
43 44 2.593956 GGGGCCGAAGTCTGGTTCT 61.594 63.158 0.00 0.00 0.00 3.01
44 45 2.046217 GGGGCCGAAGTCTGGTTC 60.046 66.667 0.00 0.00 0.00 3.62
45 46 2.529389 AGGGGCCGAAGTCTGGTT 60.529 61.111 0.00 0.00 0.00 3.67
46 47 3.003763 GAGGGGCCGAAGTCTGGT 61.004 66.667 0.00 0.00 0.00 4.00
47 48 3.787001 GGAGGGGCCGAAGTCTGG 61.787 72.222 0.00 0.00 0.00 3.86
48 49 3.787001 GGGAGGGGCCGAAGTCTG 61.787 72.222 0.00 0.00 37.63 3.51
49 50 3.564347 AAGGGAGGGGCCGAAGTCT 62.564 63.158 0.00 0.00 37.63 3.24
50 51 3.009714 AAGGGAGGGGCCGAAGTC 61.010 66.667 0.00 0.00 37.63 3.01
58 59 3.732849 GGCCAGACAAGGGAGGGG 61.733 72.222 0.00 0.00 0.00 4.79
80 81 1.739562 CTGAGAGGCTCGTGGTTGC 60.740 63.158 9.22 0.00 32.35 4.17
130 131 6.826741 GCAACAGATGTTTCTTTATAGGGGTA 59.173 38.462 0.00 0.00 35.83 3.69
355 380 3.492311 GATCCGACGCAGGAGGAGC 62.492 68.421 5.68 0.00 44.55 4.70
356 381 2.725008 GATCCGACGCAGGAGGAG 59.275 66.667 5.68 0.00 44.55 3.69
357 382 2.833582 GGATCCGACGCAGGAGGA 60.834 66.667 0.00 0.00 44.55 3.71
358 383 3.917760 GGGATCCGACGCAGGAGG 61.918 72.222 5.45 0.00 44.55 4.30
359 384 3.917760 GGGGATCCGACGCAGGAG 61.918 72.222 5.45 0.00 44.55 3.69
360 385 4.458829 AGGGGATCCGACGCAGGA 62.459 66.667 5.45 1.75 45.54 3.86
361 386 3.917760 GAGGGGATCCGACGCAGG 61.918 72.222 5.45 0.00 38.33 4.85
362 387 4.271816 CGAGGGGATCCGACGCAG 62.272 72.222 5.45 0.00 38.33 5.18
414 446 3.181489 ACGAACGGATTATGAGGACACTC 60.181 47.826 0.00 0.00 44.23 3.51
551 590 6.029346 AGATGCATCGAATTGAACCTTTTT 57.971 33.333 20.67 0.00 0.00 1.94
552 591 5.649782 AGATGCATCGAATTGAACCTTTT 57.350 34.783 20.67 0.00 0.00 2.27
553 592 6.757897 TTAGATGCATCGAATTGAACCTTT 57.242 33.333 20.67 1.42 0.00 3.11
554 593 6.757897 TTTAGATGCATCGAATTGAACCTT 57.242 33.333 20.86 2.84 0.00 3.50
555 594 6.757897 TTTTAGATGCATCGAATTGAACCT 57.242 33.333 20.86 3.34 0.00 3.50
578 617 7.226325 TGAAATTGCATCGAATTGAACCTTTTT 59.774 29.630 0.00 0.00 0.00 1.94
579 618 6.705381 TGAAATTGCATCGAATTGAACCTTTT 59.295 30.769 0.00 0.00 0.00 2.27
580 619 6.222389 TGAAATTGCATCGAATTGAACCTTT 58.778 32.000 0.00 0.00 0.00 3.11
581 620 5.782047 TGAAATTGCATCGAATTGAACCTT 58.218 33.333 0.00 0.00 0.00 3.50
582 621 5.389859 TGAAATTGCATCGAATTGAACCT 57.610 34.783 0.00 0.00 0.00 3.50
583 622 5.501252 GCATGAAATTGCATCGAATTGAACC 60.501 40.000 0.00 0.00 42.31 3.62
584 623 5.486706 GCATGAAATTGCATCGAATTGAAC 58.513 37.500 0.00 0.00 42.31 3.18
585 624 5.705813 GCATGAAATTGCATCGAATTGAA 57.294 34.783 0.00 0.00 42.31 2.69
599 638 6.324512 TGAACCCTAATAGCATTGCATGAAAT 59.675 34.615 11.91 0.00 0.00 2.17
663 707 6.402222 GTGGTAGAGTATCCATCATTCCATC 58.598 44.000 0.00 0.00 36.09 3.51
664 708 5.047021 CGTGGTAGAGTATCCATCATTCCAT 60.047 44.000 0.00 0.00 36.09 3.41
665 709 4.280929 CGTGGTAGAGTATCCATCATTCCA 59.719 45.833 0.00 0.00 36.09 3.53
666 710 4.810790 CGTGGTAGAGTATCCATCATTCC 58.189 47.826 0.00 0.00 36.09 3.01
667 711 4.021894 AGCGTGGTAGAGTATCCATCATTC 60.022 45.833 0.00 0.00 36.09 2.67
668 712 3.898123 AGCGTGGTAGAGTATCCATCATT 59.102 43.478 0.00 0.00 36.09 2.57
669 713 3.256879 CAGCGTGGTAGAGTATCCATCAT 59.743 47.826 0.00 0.00 36.09 2.45
670 714 2.623416 CAGCGTGGTAGAGTATCCATCA 59.377 50.000 0.00 0.00 36.09 3.07
713 762 8.026607 TGAAACTCGAACCATAAATCAAAATCC 58.973 33.333 0.00 0.00 0.00 3.01
734 788 4.697352 ACAGAGGTGCAGTTGATATGAAAC 59.303 41.667 0.00 0.00 0.00 2.78
781 839 0.677288 ACTACCTACAGCACACGCAA 59.323 50.000 0.00 0.00 42.27 4.85
835 896 7.522073 GCAGGATTTGACTCACTGAAACAATAA 60.522 37.037 0.00 0.00 0.00 1.40
846 907 0.807496 GGCAGCAGGATTTGACTCAC 59.193 55.000 0.00 0.00 0.00 3.51
855 916 0.537600 GCTCATGATGGCAGCAGGAT 60.538 55.000 20.89 0.00 33.06 3.24
921 992 9.914131 AGAAAGATAAGAAACAAAACAATAGCC 57.086 29.630 0.00 0.00 0.00 3.93
990 1084 2.998279 GCCAGACATGTTGCCCTGC 61.998 63.158 0.00 0.00 0.00 4.85
999 1093 3.211803 CAACTCACATTGCCAGACATG 57.788 47.619 0.00 0.00 0.00 3.21
1400 1510 8.361139 CCTATCTGACGTTTGTAGAGGAAATAT 58.639 37.037 0.00 0.00 0.00 1.28
1573 1683 3.420893 CTCAATTGGGCTCACAGGTTAA 58.579 45.455 5.42 0.00 0.00 2.01
1593 1703 4.583871 AGAAGAAATTGAGGAATCACGCT 58.416 39.130 0.00 0.00 0.00 5.07
1752 1890 7.658982 AGAACATACAATGCCATGACATACTAG 59.341 37.037 0.00 0.00 0.00 2.57
1836 2255 9.541884 TGTATTCTGACTATATATACAAGGGCA 57.458 33.333 0.00 0.00 30.97 5.36
2009 2430 6.016360 GCCAAATTATATATGTCACCAGCACA 60.016 38.462 0.00 0.00 0.00 4.57
2113 2539 3.521126 ACAGGGAGCAAGATACTGACAAT 59.479 43.478 0.00 0.00 33.57 2.71
2155 2581 7.500227 TCCAAAGTGGATGTCATAGAATGATTC 59.500 37.037 0.00 0.00 42.67 2.52
2269 2698 4.537688 CACCCCAATCATATCCATCCTAGT 59.462 45.833 0.00 0.00 0.00 2.57
2431 2863 0.467290 AGCCAATTGTCACCAACGGT 60.467 50.000 4.43 0.00 35.62 4.83
3024 3516 2.037251 GTGAGGTACCAGAGCAACTTCA 59.963 50.000 15.94 2.42 0.00 3.02
3093 3585 0.254178 GCAGGGCTTTCATGAGGAGA 59.746 55.000 11.20 0.00 0.00 3.71
3234 3726 5.678583 TGGGTGCTACTACTACTACTACTG 58.321 45.833 0.00 0.00 0.00 2.74
3235 3727 5.965033 TGGGTGCTACTACTACTACTACT 57.035 43.478 0.00 0.00 0.00 2.57
3236 3728 5.472820 CCATGGGTGCTACTACTACTACTAC 59.527 48.000 2.85 0.00 0.00 2.73
3301 3799 1.068402 CACCGTTTGCATGCAGATCAA 60.068 47.619 21.50 9.58 0.00 2.57
3713 5080 6.426937 TGGCTAACTCAAACTAGTGAAATCAC 59.573 38.462 5.40 5.40 46.77 3.06
3715 5082 7.435068 TTGGCTAACTCAAACTAGTGAAATC 57.565 36.000 0.00 0.00 0.00 2.17
3796 5217 1.300971 AATACAGCACAGCGGCAGTG 61.301 55.000 19.70 19.70 39.92 3.66
3827 5248 8.999431 TCAAACTGTTAAATCATTGTAGACTCC 58.001 33.333 0.00 0.00 0.00 3.85
3838 5259 9.237187 TGCTGGTAATATCAAACTGTTAAATCA 57.763 29.630 0.00 0.00 0.00 2.57
3839 5260 9.503427 GTGCTGGTAATATCAAACTGTTAAATC 57.497 33.333 0.00 0.00 0.00 2.17
3840 5261 9.019656 TGTGCTGGTAATATCAAACTGTTAAAT 57.980 29.630 0.00 0.00 0.00 1.40
3841 5262 8.397575 TGTGCTGGTAATATCAAACTGTTAAA 57.602 30.769 0.00 0.00 0.00 1.52
3880 5466 7.093945 ACTCAAAAGTGTTTTAAGGCTTTCAGA 60.094 33.333 4.45 0.00 33.32 3.27
3947 5694 9.334693 CTTCAATCTTAAGCACACTTTTATGAC 57.665 33.333 0.00 0.00 37.33 3.06
3989 5737 8.887717 AGTTACTCATCTTTTGCAATACTCATC 58.112 33.333 0.00 0.00 0.00 2.92
4017 5765 8.500753 AATAAAGCATTCATACGTGGACTTAA 57.499 30.769 0.00 0.00 0.00 1.85
4036 5784 9.349145 CAAACCGAACCACCTATAAAAATAAAG 57.651 33.333 0.00 0.00 0.00 1.85
4044 5792 3.327172 TGACCAAACCGAACCACCTATAA 59.673 43.478 0.00 0.00 0.00 0.98
4069 5817 8.668510 AACAGCTTATCGATGATAAATGAGTT 57.331 30.769 8.54 0.00 34.64 3.01
4113 5862 7.986085 AGCGCTATTTTATATGGACAGATTT 57.014 32.000 8.99 0.00 0.00 2.17
4164 5914 7.340487 CCTGAAAAGGAGGCAAAATAATACTCT 59.660 37.037 0.00 0.00 0.00 3.24
4165 5915 7.122799 ACCTGAAAAGGAGGCAAAATAATACTC 59.877 37.037 0.00 0.00 33.39 2.59
4202 5954 0.880278 TGCTGACTCAAAGGTGCGAC 60.880 55.000 0.00 0.00 0.00 5.19
4345 6106 5.071788 TCCCACTGAGTTCTCAATTACAACT 59.928 40.000 4.09 0.00 32.93 3.16
4352 6196 6.627087 TTAAGATCCCACTGAGTTCTCAAT 57.373 37.500 4.09 0.00 0.00 2.57
4363 6207 6.660949 CAGGTTTTCTGAATTAAGATCCCACT 59.339 38.462 0.00 0.00 46.18 4.00
4398 6249 8.103948 ACATGAGACCAAAATCTAAAGAACAG 57.896 34.615 0.00 0.00 0.00 3.16
4428 6290 7.545362 ACACTAATGAGTAATGACTGATTGC 57.455 36.000 5.22 0.00 39.51 3.56
4614 6477 7.391554 CCAGAAAGATGGTAAATGAGAACAAGA 59.608 37.037 0.00 0.00 35.47 3.02
4751 6615 3.904136 CAAGTTTGCTAGACCAACTGG 57.096 47.619 0.00 0.00 42.17 4.00
4871 6736 4.741676 GTCCACAGACAAGCTTCAAATTTG 59.258 41.667 12.15 12.15 42.99 2.32
4877 6742 1.131638 AGGTCCACAGACAAGCTTCA 58.868 50.000 0.00 0.00 45.48 3.02
4923 6788 5.953183 TGAAATAACCAGCACATGATGAAC 58.047 37.500 0.00 0.00 32.25 3.18
4984 6854 4.217550 GCTGTCCACTTGGCTTAAATAACA 59.782 41.667 0.00 0.00 34.44 2.41
4990 6860 1.896220 CAGCTGTCCACTTGGCTTAA 58.104 50.000 5.25 0.00 32.30 1.85
5053 6925 2.668212 TTTCTGAACCTGCGGGCG 60.668 61.111 12.89 0.00 35.63 6.13
5067 6939 1.787012 TAAGTGCCTCGAACCGTTTC 58.213 50.000 0.00 0.00 0.00 2.78
5076 6948 3.516615 CTTCCTCTTCTTAAGTGCCTCG 58.483 50.000 1.63 0.00 0.00 4.63
5157 7029 6.385176 TGTGGACAATGAATAGAGAGGAGAAT 59.615 38.462 0.00 0.00 0.00 2.40
5236 7108 8.784994 CCATATTCTCTCATCCAAATCTTGAAG 58.215 37.037 0.00 0.00 0.00 3.02
5237 7109 8.496916 TCCATATTCTCTCATCCAAATCTTGAA 58.503 33.333 0.00 0.00 0.00 2.69
5239 7111 8.687292 TTCCATATTCTCTCATCCAAATCTTG 57.313 34.615 0.00 0.00 0.00 3.02
5240 7112 9.129532 GTTTCCATATTCTCTCATCCAAATCTT 57.870 33.333 0.00 0.00 0.00 2.40
5329 7201 6.267817 ACACACACATCAAAGATTGTTCTTG 58.732 36.000 0.00 0.00 41.42 3.02
5333 7205 7.229306 AGACATACACACACATCAAAGATTGTT 59.771 33.333 0.00 0.00 0.00 2.83
5343 7215 7.706607 ACATACACATAGACATACACACACATC 59.293 37.037 0.00 0.00 0.00 3.06
5354 7226 9.905713 AACAGGAAATTACATACACATAGACAT 57.094 29.630 0.00 0.00 0.00 3.06
5382 7254 5.403166 CGTTCAATGGAAAACACGTAGTAGA 59.597 40.000 0.00 0.00 34.30 2.59
5456 7340 9.029368 TGAAACCAATTCATACCATGTCATTAA 57.971 29.630 0.00 0.00 43.08 1.40
5616 7500 2.091112 CGACGTCTTCAGCAGCCAG 61.091 63.158 14.70 0.00 0.00 4.85
5645 7530 2.046507 GCTGAGACCCAGGTGCAG 60.047 66.667 10.49 10.49 43.13 4.41
5655 7540 2.493675 TGTGTCTGACCTATGCTGAGAC 59.506 50.000 5.17 0.00 34.79 3.36
5733 7639 5.927030 TCAAGTATCGTTTTGCTGACATTC 58.073 37.500 0.00 0.00 0.00 2.67
5743 7649 2.980568 TCCGGCATCAAGTATCGTTTT 58.019 42.857 0.00 0.00 0.00 2.43
5760 7666 5.551760 ATTACAGAAGCTGAATTGTTCCG 57.448 39.130 0.82 0.00 35.18 4.30
5867 7773 7.775120 TCTCATTTCTCAAAGATAAAATGCCC 58.225 34.615 0.00 0.00 38.42 5.36
6103 8028 1.746239 CACTGGATGCATGTGCCGA 60.746 57.895 2.46 0.00 41.18 5.54
6105 8030 0.889994 TTTCACTGGATGCATGTGCC 59.110 50.000 2.46 0.00 41.18 5.01
6108 8033 3.928727 CAGTTTTCACTGGATGCATGT 57.071 42.857 2.46 0.00 46.10 3.21
6143 8076 3.215975 CCCCCGTTTTACAGTTTTCAGA 58.784 45.455 0.00 0.00 0.00 3.27
6162 8095 4.221041 GGGAGTATCTACAATCTAGTGCCC 59.779 50.000 0.00 0.00 33.73 5.36
6164 8097 5.184287 GGAGGGAGTATCTACAATCTAGTGC 59.816 48.000 0.00 0.00 33.73 4.40
6169 8102 4.456662 ACGGAGGGAGTATCTACAATCT 57.543 45.455 0.00 0.00 33.73 2.40
6181 8114 5.731591 ACTTATAAAAGTGAACGGAGGGAG 58.268 41.667 0.00 0.00 44.40 4.30
6182 8115 5.750352 ACTTATAAAAGTGAACGGAGGGA 57.250 39.130 0.00 0.00 44.40 4.20
6183 8116 5.704053 ACAACTTATAAAAGTGAACGGAGGG 59.296 40.000 0.00 0.00 45.37 4.30
6184 8117 6.796705 ACAACTTATAAAAGTGAACGGAGG 57.203 37.500 0.00 0.00 45.37 4.30
6185 8118 8.339714 TGAAACAACTTATAAAAGTGAACGGAG 58.660 33.333 0.00 0.00 45.37 4.63
6186 8119 8.124199 GTGAAACAACTTATAAAAGTGAACGGA 58.876 33.333 0.00 0.00 45.37 4.69
6187 8120 8.265220 GTGAAACAACTTATAAAAGTGAACGG 57.735 34.615 0.00 0.00 45.37 4.44
6203 8136 7.328249 TTCAAATGTCTGAAACTGTGAAACAAC 59.672 33.333 0.00 0.00 38.27 3.32
6204 8137 7.374272 TTCAAATGTCTGAAACTGTGAAACAA 58.626 30.769 0.00 0.00 38.27 2.83
6205 8138 6.918626 TTCAAATGTCTGAAACTGTGAAACA 58.081 32.000 0.00 0.00 37.09 2.83
6206 8139 7.810766 TTTCAAATGTCTGAAACTGTGAAAC 57.189 32.000 0.00 0.00 39.74 2.78
6207 8140 8.871862 CATTTTCAAATGTCTGAAACTGTGAAA 58.128 29.630 4.36 0.00 43.29 2.69
6208 8141 7.492020 CCATTTTCAAATGTCTGAAACTGTGAA 59.508 33.333 10.63 0.00 43.29 3.18
6209 8142 6.979817 CCATTTTCAAATGTCTGAAACTGTGA 59.020 34.615 10.63 0.00 43.29 3.58
6210 8143 6.201425 CCCATTTTCAAATGTCTGAAACTGTG 59.799 38.462 10.63 6.85 43.29 3.66
6211 8144 6.282930 CCCATTTTCAAATGTCTGAAACTGT 58.717 36.000 10.63 0.00 43.29 3.55
6212 8145 5.178067 GCCCATTTTCAAATGTCTGAAACTG 59.822 40.000 10.63 8.59 43.29 3.16
6213 8146 5.070847 AGCCCATTTTCAAATGTCTGAAACT 59.929 36.000 10.63 0.00 43.29 2.66
6214 8147 5.178067 CAGCCCATTTTCAAATGTCTGAAAC 59.822 40.000 17.98 1.75 43.29 2.78
6215 8148 5.299148 CAGCCCATTTTCAAATGTCTGAAA 58.701 37.500 17.98 0.00 43.24 2.69
6216 8149 4.800249 GCAGCCCATTTTCAAATGTCTGAA 60.800 41.667 22.75 0.00 43.24 3.02
6217 8150 3.306225 GCAGCCCATTTTCAAATGTCTGA 60.306 43.478 22.75 0.00 43.24 3.27
6218 8151 2.997986 GCAGCCCATTTTCAAATGTCTG 59.002 45.455 18.26 18.26 43.24 3.51
6219 8152 2.901839 AGCAGCCCATTTTCAAATGTCT 59.098 40.909 10.63 5.38 43.24 3.41
6220 8153 3.323751 AGCAGCCCATTTTCAAATGTC 57.676 42.857 10.63 3.51 43.24 3.06
6221 8154 3.775261 AAGCAGCCCATTTTCAAATGT 57.225 38.095 10.63 0.00 43.24 2.71
6222 8155 3.437741 GGAAAGCAGCCCATTTTCAAATG 59.562 43.478 5.42 5.42 44.12 2.32
6223 8156 3.072768 TGGAAAGCAGCCCATTTTCAAAT 59.927 39.130 7.06 0.00 33.57 2.32
6224 8157 2.437281 TGGAAAGCAGCCCATTTTCAAA 59.563 40.909 7.06 0.00 33.57 2.69
6225 8158 2.045524 TGGAAAGCAGCCCATTTTCAA 58.954 42.857 7.06 0.00 33.57 2.69
6226 8159 1.714541 TGGAAAGCAGCCCATTTTCA 58.285 45.000 7.06 0.00 33.57 2.69
6227 8160 2.027837 ACATGGAAAGCAGCCCATTTTC 60.028 45.455 0.00 0.00 40.95 2.29
6228 8161 1.980036 ACATGGAAAGCAGCCCATTTT 59.020 42.857 0.00 0.00 40.95 1.82
6229 8162 1.648116 ACATGGAAAGCAGCCCATTT 58.352 45.000 0.00 0.00 40.95 2.32
6230 8163 1.276989 CAACATGGAAAGCAGCCCATT 59.723 47.619 0.00 0.00 40.95 3.16
6231 8164 0.899720 CAACATGGAAAGCAGCCCAT 59.100 50.000 0.00 0.00 43.51 4.00
6232 8165 0.469705 ACAACATGGAAAGCAGCCCA 60.470 50.000 0.00 0.00 36.79 5.36
6233 8166 0.244721 GACAACATGGAAAGCAGCCC 59.755 55.000 0.00 0.00 0.00 5.19
6234 8167 1.251251 AGACAACATGGAAAGCAGCC 58.749 50.000 0.00 0.00 0.00 4.85
6235 8168 4.503741 TTTAGACAACATGGAAAGCAGC 57.496 40.909 0.00 0.00 0.00 5.25
6236 8169 6.449698 ACATTTTAGACAACATGGAAAGCAG 58.550 36.000 0.00 0.00 0.00 4.24
6237 8170 6.265196 AGACATTTTAGACAACATGGAAAGCA 59.735 34.615 0.00 0.00 0.00 3.91
6238 8171 6.681777 AGACATTTTAGACAACATGGAAAGC 58.318 36.000 0.00 0.00 0.00 3.51
6239 8172 8.352201 TGAAGACATTTTAGACAACATGGAAAG 58.648 33.333 0.00 0.00 0.00 2.62
6240 8173 8.231692 TGAAGACATTTTAGACAACATGGAAA 57.768 30.769 0.00 0.00 0.00 3.13
6241 8174 7.815840 TGAAGACATTTTAGACAACATGGAA 57.184 32.000 0.00 0.00 0.00 3.53
6242 8175 7.519809 CGTTGAAGACATTTTAGACAACATGGA 60.520 37.037 0.00 0.00 36.84 3.41
6243 8176 6.578545 CGTTGAAGACATTTTAGACAACATGG 59.421 38.462 0.00 0.00 36.84 3.66
6244 8177 7.132213 ACGTTGAAGACATTTTAGACAACATG 58.868 34.615 0.00 0.00 36.84 3.21
6245 8178 7.259290 ACGTTGAAGACATTTTAGACAACAT 57.741 32.000 0.00 0.00 36.84 2.71
6246 8179 6.671614 ACGTTGAAGACATTTTAGACAACA 57.328 33.333 0.00 0.00 36.84 3.33
6264 8197 9.337091 CCCTTTGTTCACTTTTATAATACGTTG 57.663 33.333 0.00 0.00 0.00 4.10
6265 8198 9.287373 TCCCTTTGTTCACTTTTATAATACGTT 57.713 29.630 0.00 0.00 0.00 3.99
6266 8199 8.851541 TCCCTTTGTTCACTTTTATAATACGT 57.148 30.769 0.00 0.00 0.00 3.57
6267 8200 8.943002 ACTCCCTTTGTTCACTTTTATAATACG 58.057 33.333 0.00 0.00 0.00 3.06
6272 8205 9.667107 CATCTACTCCCTTTGTTCACTTTTATA 57.333 33.333 0.00 0.00 0.00 0.98
6273 8206 8.383175 TCATCTACTCCCTTTGTTCACTTTTAT 58.617 33.333 0.00 0.00 0.00 1.40
6274 8207 7.741785 TCATCTACTCCCTTTGTTCACTTTTA 58.258 34.615 0.00 0.00 0.00 1.52
6275 8208 6.601332 TCATCTACTCCCTTTGTTCACTTTT 58.399 36.000 0.00 0.00 0.00 2.27
6276 8209 6.187727 TCATCTACTCCCTTTGTTCACTTT 57.812 37.500 0.00 0.00 0.00 2.66
6277 8210 5.825593 TCATCTACTCCCTTTGTTCACTT 57.174 39.130 0.00 0.00 0.00 3.16
6278 8211 5.825593 TTCATCTACTCCCTTTGTTCACT 57.174 39.130 0.00 0.00 0.00 3.41
6279 8212 5.292101 CGATTCATCTACTCCCTTTGTTCAC 59.708 44.000 0.00 0.00 0.00 3.18
6280 8213 5.419542 CGATTCATCTACTCCCTTTGTTCA 58.580 41.667 0.00 0.00 0.00 3.18
6281 8214 4.811557 CCGATTCATCTACTCCCTTTGTTC 59.188 45.833 0.00 0.00 0.00 3.18
6282 8215 4.469945 TCCGATTCATCTACTCCCTTTGTT 59.530 41.667 0.00 0.00 0.00 2.83
6283 8216 4.030913 TCCGATTCATCTACTCCCTTTGT 58.969 43.478 0.00 0.00 0.00 2.83
6284 8217 4.100189 AGTCCGATTCATCTACTCCCTTTG 59.900 45.833 0.00 0.00 0.00 2.77
6285 8218 4.290942 AGTCCGATTCATCTACTCCCTTT 58.709 43.478 0.00 0.00 0.00 3.11
6286 8219 3.917300 AGTCCGATTCATCTACTCCCTT 58.083 45.455 0.00 0.00 0.00 3.95
6287 8220 3.603965 AGTCCGATTCATCTACTCCCT 57.396 47.619 0.00 0.00 0.00 4.20
6288 8221 5.071370 TCTTAGTCCGATTCATCTACTCCC 58.929 45.833 0.00 0.00 0.00 4.30
6289 8222 5.998981 TCTCTTAGTCCGATTCATCTACTCC 59.001 44.000 0.00 0.00 0.00 3.85
6290 8223 7.361713 CCATCTCTTAGTCCGATTCATCTACTC 60.362 44.444 0.00 0.00 0.00 2.59
6291 8224 6.432783 CCATCTCTTAGTCCGATTCATCTACT 59.567 42.308 0.00 0.00 0.00 2.57
6292 8225 6.349777 CCCATCTCTTAGTCCGATTCATCTAC 60.350 46.154 0.00 0.00 0.00 2.59
6293 8226 5.712446 CCCATCTCTTAGTCCGATTCATCTA 59.288 44.000 0.00 0.00 0.00 1.98
6294 8227 4.526262 CCCATCTCTTAGTCCGATTCATCT 59.474 45.833 0.00 0.00 0.00 2.90
6306 8239 2.623889 CACGAGGTACCCCATCTCTTAG 59.376 54.545 8.74 0.00 0.00 2.18
6318 8251 3.909430 TGTTCAAGTGATCACGAGGTAC 58.091 45.455 19.85 15.87 36.20 3.34
6379 8312 3.576356 CTGGGCTTGCCGCGTATG 61.576 66.667 4.92 0.00 40.44 2.39
6397 8330 4.592997 AACAATCCTAAGGAAGAAGGGG 57.407 45.455 0.00 0.00 34.34 4.79
6518 8460 7.335422 GGGCAATCATATAAGATTCTGGTGTAG 59.665 40.741 0.21 0.00 36.13 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.