Multiple sequence alignment - TraesCS2A01G489100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G489100 chr2A 100.000 4138 0 0 1 4138 723065061 723069198 0.000000e+00 7642.0
1 TraesCS2A01G489100 chr2A 89.977 1317 113 11 1300 2616 722756508 722755211 0.000000e+00 1683.0
2 TraesCS2A01G489100 chr2A 83.265 490 68 10 3661 4138 24573243 24572756 4.910000e-119 438.0
3 TraesCS2A01G489100 chr2A 83.265 490 68 10 3661 4138 24602633 24602146 4.910000e-119 438.0
4 TraesCS2A01G489100 chr2A 74.684 869 166 33 1323 2179 722839860 722840686 1.840000e-88 337.0
5 TraesCS2A01G489100 chr2A 91.163 215 19 0 2941 3155 722754947 722754733 4.050000e-75 292.0
6 TraesCS2A01G489100 chr2A 91.573 178 15 0 203 380 389221006 389221183 3.190000e-61 246.0
7 TraesCS2A01G489100 chr2A 82.653 98 15 2 2745 2841 722755112 722755016 7.370000e-13 86.1
8 TraesCS2A01G489100 chr2D 90.344 2527 138 36 387 2866 588452207 588454674 0.000000e+00 3217.0
9 TraesCS2A01G489100 chr2D 89.278 886 77 5 1300 2185 588175607 588174740 0.000000e+00 1094.0
10 TraesCS2A01G489100 chr2D 92.838 377 23 3 2909 3285 588454686 588455058 1.010000e-150 544.0
11 TraesCS2A01G489100 chr2D 86.613 493 46 12 3661 4138 588487897 588488384 1.020000e-145 527.0
12 TraesCS2A01G489100 chr2D 77.620 916 156 31 1315 2212 588435388 588436272 1.030000e-140 510.0
13 TraesCS2A01G489100 chr2D 88.696 345 28 7 3298 3639 588486056 588486392 1.070000e-110 411.0
14 TraesCS2A01G489100 chr2D 75.719 869 157 34 1323 2179 588248460 588249286 1.800000e-103 387.0
15 TraesCS2A01G489100 chr2D 93.678 174 9 2 203 374 616968921 616968748 4.100000e-65 259.0
16 TraesCS2A01G489100 chr2B 94.107 1595 72 14 1324 2907 711982149 711983732 0.000000e+00 2405.0
17 TraesCS2A01G489100 chr2B 89.864 1322 113 11 1296 2616 711321120 711319819 0.000000e+00 1679.0
18 TraesCS2A01G489100 chr2B 90.909 704 46 6 539 1238 711981364 711982053 0.000000e+00 929.0
19 TraesCS2A01G489100 chr2B 77.352 914 163 27 1315 2212 711867331 711868216 6.180000e-138 501.0
20 TraesCS2A01G489100 chr2B 90.520 327 23 7 2916 3240 711983916 711984236 3.820000e-115 425.0
21 TraesCS2A01G489100 chr2B 75.376 865 167 26 1323 2179 711726118 711726944 3.910000e-100 375.0
22 TraesCS2A01G489100 chr2B 89.815 216 20 2 2941 3155 711319541 711319327 4.070000e-70 276.0
23 TraesCS2A01G489100 chr2B 87.755 98 10 2 2745 2841 711319717 711319621 3.380000e-21 113.0
24 TraesCS2A01G489100 chr5D 84.049 489 60 12 3661 4138 77747775 77747294 4.880000e-124 455.0
25 TraesCS2A01G489100 chr5D 95.152 165 8 0 204 368 48668966 48669130 1.140000e-65 261.0
26 TraesCS2A01G489100 chr5D 92.941 170 12 0 201 370 11004407 11004576 8.880000e-62 248.0
27 TraesCS2A01G489100 chr4B 83.958 480 62 9 3670 4138 520518593 520518118 2.930000e-121 446.0
28 TraesCS2A01G489100 chr4B 87.500 56 4 3 3581 3636 202965523 202965471 1.240000e-05 62.1
29 TraesCS2A01G489100 chrUn 83.265 490 68 10 3661 4138 228955682 228955195 4.910000e-119 438.0
30 TraesCS2A01G489100 chrUn 83.265 490 68 10 3661 4138 402173826 402174313 4.910000e-119 438.0
31 TraesCS2A01G489100 chr1A 83.265 490 68 10 3661 4138 534355726 534356213 4.910000e-119 438.0
32 TraesCS2A01G489100 chr1A 83.333 492 64 12 3661 4138 534390599 534391086 4.910000e-119 438.0
33 TraesCS2A01G489100 chr1D 94.083 169 10 0 204 372 422051585 422051417 1.480000e-64 257.0
34 TraesCS2A01G489100 chr1D 90.761 184 16 1 204 387 362598056 362597874 1.150000e-60 244.0
35 TraesCS2A01G489100 chr1D 84.211 57 7 2 3581 3637 290948629 290948683 2.000000e-03 54.7
36 TraesCS2A01G489100 chr7A 93.491 169 11 0 203 371 443397631 443397799 6.870000e-63 252.0
37 TraesCS2A01G489100 chr3D 93.529 170 10 1 204 373 550509432 550509600 6.870000e-63 252.0
38 TraesCS2A01G489100 chr3D 96.970 33 1 0 3588 3620 269941675 269941643 5.780000e-04 56.5
39 TraesCS2A01G489100 chr1B 89.894 188 16 3 184 370 434424078 434423893 5.350000e-59 239.0
40 TraesCS2A01G489100 chr6B 84.746 59 7 2 3580 3637 62151377 62151320 1.610000e-04 58.4
41 TraesCS2A01G489100 chr7D 85.714 56 5 3 3581 3636 241942122 241942070 5.780000e-04 56.5
42 TraesCS2A01G489100 chr3B 89.130 46 4 1 3581 3626 664018159 664018203 5.780000e-04 56.5
43 TraesCS2A01G489100 chr4D 84.211 57 7 2 3581 3637 146122014 146122068 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G489100 chr2A 723065061 723069198 4137 False 7642.000000 7642 100.000000 1 4138 1 chr2A.!!$F3 4137
1 TraesCS2A01G489100 chr2A 722754733 722756508 1775 True 687.033333 1683 87.931000 1300 3155 3 chr2A.!!$R3 1855
2 TraesCS2A01G489100 chr2A 722839860 722840686 826 False 337.000000 337 74.684000 1323 2179 1 chr2A.!!$F2 856
3 TraesCS2A01G489100 chr2D 588452207 588455058 2851 False 1880.500000 3217 91.591000 387 3285 2 chr2D.!!$F3 2898
4 TraesCS2A01G489100 chr2D 588174740 588175607 867 True 1094.000000 1094 89.278000 1300 2185 1 chr2D.!!$R1 885
5 TraesCS2A01G489100 chr2D 588435388 588436272 884 False 510.000000 510 77.620000 1315 2212 1 chr2D.!!$F2 897
6 TraesCS2A01G489100 chr2D 588486056 588488384 2328 False 469.000000 527 87.654500 3298 4138 2 chr2D.!!$F4 840
7 TraesCS2A01G489100 chr2D 588248460 588249286 826 False 387.000000 387 75.719000 1323 2179 1 chr2D.!!$F1 856
8 TraesCS2A01G489100 chr2B 711981364 711984236 2872 False 1253.000000 2405 91.845333 539 3240 3 chr2B.!!$F3 2701
9 TraesCS2A01G489100 chr2B 711319327 711321120 1793 True 689.333333 1679 89.144667 1296 3155 3 chr2B.!!$R1 1859
10 TraesCS2A01G489100 chr2B 711867331 711868216 885 False 501.000000 501 77.352000 1315 2212 1 chr2B.!!$F2 897
11 TraesCS2A01G489100 chr2B 711726118 711726944 826 False 375.000000 375 75.376000 1323 2179 1 chr2B.!!$F1 856

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
148 149 0.034616 ACAAGTGAGCTGAGCTGTCC 59.965 55.0 13.71 0.0 39.88 4.02 F
152 153 0.035630 GTGAGCTGAGCTGTCCCAAT 60.036 55.0 13.71 0.0 39.88 3.16 F
213 214 0.106619 ACTAGCACCTACTCCCTCCG 60.107 60.0 0.00 0.0 0.00 4.63 F
572 582 0.252197 GGGGTGTATCGAAGCAAGGT 59.748 55.0 0.00 0.0 0.00 3.50 F
1171 1194 0.953471 TTTGTTGATCCCCGTCTGCG 60.953 55.0 0.00 0.0 37.95 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1328 1406 0.891449 TGCCGTTGTGGTACATTGGG 60.891 55.000 0.00 0.0 44.52 4.12 R
2304 2400 4.363990 CGTCGCCCACTGCAGACT 62.364 66.667 23.35 0.0 39.63 3.24 R
2417 2513 3.358076 CTTCGGGTCCAGCGTCTCC 62.358 68.421 0.00 0.0 0.00 3.71 R
2732 2881 0.741326 TGCTCTCGTAGATGACCTGC 59.259 55.000 0.00 0.0 33.89 4.85 R
3288 3613 1.088306 ACACAAAACCGTTTGCTCGA 58.912 45.000 0.00 0.0 46.84 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.810652 GATGGTTTTGTGCAATTTACTCTAAA 57.189 30.769 0.00 0.00 0.00 1.85
26 27 9.255304 GATGGTTTTGTGCAATTTACTCTAAAA 57.745 29.630 0.00 0.00 0.00 1.52
27 28 9.606631 ATGGTTTTGTGCAATTTACTCTAAAAA 57.393 25.926 0.00 0.00 0.00 1.94
95 96 2.100605 AAACTGGACCGAGAAGATGC 57.899 50.000 0.00 0.00 0.00 3.91
96 97 0.976641 AACTGGACCGAGAAGATGCA 59.023 50.000 0.00 0.00 0.00 3.96
97 98 0.247736 ACTGGACCGAGAAGATGCAC 59.752 55.000 0.00 0.00 0.00 4.57
98 99 0.247460 CTGGACCGAGAAGATGCACA 59.753 55.000 0.00 0.00 0.00 4.57
99 100 0.684535 TGGACCGAGAAGATGCACAA 59.315 50.000 0.00 0.00 0.00 3.33
100 101 1.079503 GGACCGAGAAGATGCACAAC 58.920 55.000 0.00 0.00 0.00 3.32
101 102 1.608025 GGACCGAGAAGATGCACAACA 60.608 52.381 0.00 0.00 0.00 3.33
102 103 2.143122 GACCGAGAAGATGCACAACAA 58.857 47.619 0.00 0.00 0.00 2.83
103 104 2.548057 GACCGAGAAGATGCACAACAAA 59.452 45.455 0.00 0.00 0.00 2.83
104 105 2.948979 ACCGAGAAGATGCACAACAAAA 59.051 40.909 0.00 0.00 0.00 2.44
105 106 3.380004 ACCGAGAAGATGCACAACAAAAA 59.620 39.130 0.00 0.00 0.00 1.94
106 107 3.976942 CCGAGAAGATGCACAACAAAAAG 59.023 43.478 0.00 0.00 0.00 2.27
107 108 4.261155 CCGAGAAGATGCACAACAAAAAGA 60.261 41.667 0.00 0.00 0.00 2.52
108 109 5.455392 CGAGAAGATGCACAACAAAAAGAT 58.545 37.500 0.00 0.00 0.00 2.40
109 110 5.341462 CGAGAAGATGCACAACAAAAAGATG 59.659 40.000 0.00 0.00 0.00 2.90
110 111 6.395426 AGAAGATGCACAACAAAAAGATGA 57.605 33.333 0.00 0.00 0.00 2.92
111 112 6.808829 AGAAGATGCACAACAAAAAGATGAA 58.191 32.000 0.00 0.00 0.00 2.57
112 113 7.267128 AGAAGATGCACAACAAAAAGATGAAA 58.733 30.769 0.00 0.00 0.00 2.69
113 114 7.437267 AGAAGATGCACAACAAAAAGATGAAAG 59.563 33.333 0.00 0.00 0.00 2.62
114 115 6.808829 AGATGCACAACAAAAAGATGAAAGA 58.191 32.000 0.00 0.00 0.00 2.52
115 116 7.267128 AGATGCACAACAAAAAGATGAAAGAA 58.733 30.769 0.00 0.00 0.00 2.52
116 117 6.890663 TGCACAACAAAAAGATGAAAGAAG 57.109 33.333 0.00 0.00 0.00 2.85
117 118 6.397272 TGCACAACAAAAAGATGAAAGAAGT 58.603 32.000 0.00 0.00 0.00 3.01
118 119 7.542890 TGCACAACAAAAAGATGAAAGAAGTA 58.457 30.769 0.00 0.00 0.00 2.24
119 120 7.701924 TGCACAACAAAAAGATGAAAGAAGTAG 59.298 33.333 0.00 0.00 0.00 2.57
120 121 7.702348 GCACAACAAAAAGATGAAAGAAGTAGT 59.298 33.333 0.00 0.00 0.00 2.73
121 122 9.573133 CACAACAAAAAGATGAAAGAAGTAGTT 57.427 29.630 0.00 0.00 0.00 2.24
125 126 8.568794 ACAAAAAGATGAAAGAAGTAGTTAGGC 58.431 33.333 0.00 0.00 0.00 3.93
126 127 8.567948 CAAAAAGATGAAAGAAGTAGTTAGGCA 58.432 33.333 0.00 0.00 0.00 4.75
127 128 8.870075 AAAAGATGAAAGAAGTAGTTAGGCAT 57.130 30.769 0.00 0.00 0.00 4.40
128 129 9.959721 AAAAGATGAAAGAAGTAGTTAGGCATA 57.040 29.630 0.00 0.00 0.00 3.14
129 130 9.959721 AAAGATGAAAGAAGTAGTTAGGCATAA 57.040 29.630 0.00 0.00 0.00 1.90
130 131 8.950208 AGATGAAAGAAGTAGTTAGGCATAAC 57.050 34.615 13.23 13.23 41.43 1.89
131 132 8.540388 AGATGAAAGAAGTAGTTAGGCATAACA 58.460 33.333 22.06 6.66 43.21 2.41
132 133 9.162764 GATGAAAGAAGTAGTTAGGCATAACAA 57.837 33.333 22.06 0.00 43.21 2.83
133 134 8.547967 TGAAAGAAGTAGTTAGGCATAACAAG 57.452 34.615 22.06 0.00 43.21 3.16
134 135 8.154856 TGAAAGAAGTAGTTAGGCATAACAAGT 58.845 33.333 22.06 5.48 43.21 3.16
135 136 7.907214 AAGAAGTAGTTAGGCATAACAAGTG 57.093 36.000 22.06 0.00 43.21 3.16
136 137 7.241042 AGAAGTAGTTAGGCATAACAAGTGA 57.759 36.000 22.06 0.67 43.21 3.41
137 138 7.324178 AGAAGTAGTTAGGCATAACAAGTGAG 58.676 38.462 22.06 0.00 43.21 3.51
138 139 5.420409 AGTAGTTAGGCATAACAAGTGAGC 58.580 41.667 22.06 5.18 43.21 4.26
139 140 4.559862 AGTTAGGCATAACAAGTGAGCT 57.440 40.909 22.06 0.00 43.21 4.09
140 141 4.256920 AGTTAGGCATAACAAGTGAGCTG 58.743 43.478 22.06 0.00 43.21 4.24
141 142 4.020218 AGTTAGGCATAACAAGTGAGCTGA 60.020 41.667 22.06 0.00 43.21 4.26
142 143 2.983229 AGGCATAACAAGTGAGCTGAG 58.017 47.619 0.00 0.00 0.00 3.35
143 144 1.399791 GGCATAACAAGTGAGCTGAGC 59.600 52.381 0.00 0.00 0.00 4.26
144 145 2.354259 GCATAACAAGTGAGCTGAGCT 58.646 47.619 6.69 6.69 43.88 4.09
145 146 2.095532 GCATAACAAGTGAGCTGAGCTG 59.904 50.000 13.71 0.00 39.88 4.24
146 147 3.332919 CATAACAAGTGAGCTGAGCTGT 58.667 45.455 13.71 0.00 39.88 4.40
147 148 1.876322 AACAAGTGAGCTGAGCTGTC 58.124 50.000 13.71 4.34 39.88 3.51
148 149 0.034616 ACAAGTGAGCTGAGCTGTCC 59.965 55.000 13.71 0.00 39.88 4.02
149 150 0.673022 CAAGTGAGCTGAGCTGTCCC 60.673 60.000 13.71 0.00 39.88 4.46
150 151 1.123861 AAGTGAGCTGAGCTGTCCCA 61.124 55.000 13.71 0.00 39.88 4.37
151 152 1.123861 AGTGAGCTGAGCTGTCCCAA 61.124 55.000 13.71 0.00 39.88 4.12
152 153 0.035630 GTGAGCTGAGCTGTCCCAAT 60.036 55.000 13.71 0.00 39.88 3.16
153 154 0.694771 TGAGCTGAGCTGTCCCAATT 59.305 50.000 13.71 0.00 39.88 2.32
154 155 1.908619 TGAGCTGAGCTGTCCCAATTA 59.091 47.619 13.71 0.00 39.88 1.40
155 156 2.093288 TGAGCTGAGCTGTCCCAATTAG 60.093 50.000 13.71 0.00 39.88 1.73
156 157 1.912043 AGCTGAGCTGTCCCAATTAGT 59.088 47.619 5.97 0.00 37.57 2.24
157 158 3.107601 AGCTGAGCTGTCCCAATTAGTA 58.892 45.455 5.97 0.00 37.57 1.82
158 159 3.519510 AGCTGAGCTGTCCCAATTAGTAA 59.480 43.478 5.97 0.00 37.57 2.24
159 160 4.019321 AGCTGAGCTGTCCCAATTAGTAAA 60.019 41.667 5.97 0.00 37.57 2.01
160 161 4.333926 GCTGAGCTGTCCCAATTAGTAAAG 59.666 45.833 0.00 0.00 0.00 1.85
161 162 5.491982 CTGAGCTGTCCCAATTAGTAAAGT 58.508 41.667 0.00 0.00 0.00 2.66
162 163 5.245531 TGAGCTGTCCCAATTAGTAAAGTG 58.754 41.667 0.00 0.00 0.00 3.16
163 164 5.012664 TGAGCTGTCCCAATTAGTAAAGTGA 59.987 40.000 0.00 0.00 32.43 3.41
164 165 5.491982 AGCTGTCCCAATTAGTAAAGTGAG 58.508 41.667 0.00 0.00 32.43 3.51
165 166 5.013183 AGCTGTCCCAATTAGTAAAGTGAGT 59.987 40.000 0.00 0.00 32.43 3.41
166 167 5.122396 GCTGTCCCAATTAGTAAAGTGAGTG 59.878 44.000 0.00 0.00 32.43 3.51
167 168 5.556915 TGTCCCAATTAGTAAAGTGAGTGG 58.443 41.667 0.00 0.00 32.43 4.00
168 169 5.308497 TGTCCCAATTAGTAAAGTGAGTGGA 59.692 40.000 0.00 0.00 32.43 4.02
169 170 6.183361 TGTCCCAATTAGTAAAGTGAGTGGAA 60.183 38.462 0.00 0.00 32.43 3.53
170 171 6.371825 GTCCCAATTAGTAAAGTGAGTGGAAG 59.628 42.308 0.00 0.00 32.43 3.46
171 172 6.043938 TCCCAATTAGTAAAGTGAGTGGAAGT 59.956 38.462 0.00 0.00 32.43 3.01
172 173 7.236019 TCCCAATTAGTAAAGTGAGTGGAAGTA 59.764 37.037 0.00 0.00 32.43 2.24
173 174 7.881232 CCCAATTAGTAAAGTGAGTGGAAGTAA 59.119 37.037 0.00 0.00 32.43 2.24
174 175 9.280174 CCAATTAGTAAAGTGAGTGGAAGTAAA 57.720 33.333 0.00 0.00 32.43 2.01
179 180 8.608844 AGTAAAGTGAGTGGAAGTAAATCAAG 57.391 34.615 0.00 0.00 0.00 3.02
180 181 8.429641 AGTAAAGTGAGTGGAAGTAAATCAAGA 58.570 33.333 0.00 0.00 0.00 3.02
181 182 9.052759 GTAAAGTGAGTGGAAGTAAATCAAGAA 57.947 33.333 0.00 0.00 0.00 2.52
182 183 7.736447 AAGTGAGTGGAAGTAAATCAAGAAG 57.264 36.000 0.00 0.00 0.00 2.85
183 184 6.831976 AGTGAGTGGAAGTAAATCAAGAAGT 58.168 36.000 0.00 0.00 0.00 3.01
184 185 7.283329 AGTGAGTGGAAGTAAATCAAGAAGTT 58.717 34.615 0.00 0.00 0.00 2.66
185 186 7.227512 AGTGAGTGGAAGTAAATCAAGAAGTTG 59.772 37.037 0.00 0.00 34.67 3.16
186 187 6.486657 TGAGTGGAAGTAAATCAAGAAGTTGG 59.513 38.462 0.00 0.00 34.09 3.77
187 188 5.770162 AGTGGAAGTAAATCAAGAAGTTGGG 59.230 40.000 0.00 0.00 34.09 4.12
188 189 5.768164 GTGGAAGTAAATCAAGAAGTTGGGA 59.232 40.000 0.00 0.00 34.09 4.37
189 190 6.003950 TGGAAGTAAATCAAGAAGTTGGGAG 58.996 40.000 0.00 0.00 34.09 4.30
190 191 6.004574 GGAAGTAAATCAAGAAGTTGGGAGT 58.995 40.000 0.00 0.00 34.09 3.85
191 192 6.490381 GGAAGTAAATCAAGAAGTTGGGAGTT 59.510 38.462 0.00 0.00 34.09 3.01
192 193 7.308649 GGAAGTAAATCAAGAAGTTGGGAGTTC 60.309 40.741 0.00 0.00 35.79 3.01
193 194 6.601332 AGTAAATCAAGAAGTTGGGAGTTCA 58.399 36.000 0.00 0.00 37.62 3.18
194 195 7.060421 AGTAAATCAAGAAGTTGGGAGTTCAA 58.940 34.615 0.00 0.00 37.62 2.69
195 196 5.774498 AATCAAGAAGTTGGGAGTTCAAC 57.226 39.130 0.00 0.00 45.22 3.18
202 203 2.152016 GTTGGGAGTTCAACTAGCACC 58.848 52.381 0.00 0.00 42.54 5.01
203 204 1.729586 TGGGAGTTCAACTAGCACCT 58.270 50.000 0.00 0.00 0.00 4.00
204 205 2.897350 TGGGAGTTCAACTAGCACCTA 58.103 47.619 0.00 0.00 0.00 3.08
205 206 2.565834 TGGGAGTTCAACTAGCACCTAC 59.434 50.000 0.00 0.00 0.00 3.18
206 207 2.832733 GGGAGTTCAACTAGCACCTACT 59.167 50.000 0.00 0.00 0.00 2.57
207 208 3.119065 GGGAGTTCAACTAGCACCTACTC 60.119 52.174 0.00 0.00 0.00 2.59
208 209 3.119065 GGAGTTCAACTAGCACCTACTCC 60.119 52.174 12.87 12.87 42.18 3.85
209 210 2.832733 AGTTCAACTAGCACCTACTCCC 59.167 50.000 0.00 0.00 0.00 4.30
210 211 2.832733 GTTCAACTAGCACCTACTCCCT 59.167 50.000 0.00 0.00 0.00 4.20
211 212 2.736347 TCAACTAGCACCTACTCCCTC 58.264 52.381 0.00 0.00 0.00 4.30
212 213 1.757699 CAACTAGCACCTACTCCCTCC 59.242 57.143 0.00 0.00 0.00 4.30
213 214 0.106619 ACTAGCACCTACTCCCTCCG 60.107 60.000 0.00 0.00 0.00 4.63
214 215 0.106619 CTAGCACCTACTCCCTCCGT 60.107 60.000 0.00 0.00 0.00 4.69
215 216 0.333993 TAGCACCTACTCCCTCCGTT 59.666 55.000 0.00 0.00 0.00 4.44
216 217 0.971447 AGCACCTACTCCCTCCGTTC 60.971 60.000 0.00 0.00 0.00 3.95
217 218 1.957765 GCACCTACTCCCTCCGTTCC 61.958 65.000 0.00 0.00 0.00 3.62
218 219 0.324460 CACCTACTCCCTCCGTTCCT 60.324 60.000 0.00 0.00 0.00 3.36
219 220 1.064166 CACCTACTCCCTCCGTTCCTA 60.064 57.143 0.00 0.00 0.00 2.94
220 221 1.642762 ACCTACTCCCTCCGTTCCTAA 59.357 52.381 0.00 0.00 0.00 2.69
221 222 2.043526 ACCTACTCCCTCCGTTCCTAAA 59.956 50.000 0.00 0.00 0.00 1.85
222 223 3.306613 CCTACTCCCTCCGTTCCTAAAT 58.693 50.000 0.00 0.00 0.00 1.40
223 224 4.078980 ACCTACTCCCTCCGTTCCTAAATA 60.079 45.833 0.00 0.00 0.00 1.40
224 225 5.085219 CCTACTCCCTCCGTTCCTAAATAT 58.915 45.833 0.00 0.00 0.00 1.28
225 226 6.183361 ACCTACTCCCTCCGTTCCTAAATATA 60.183 42.308 0.00 0.00 0.00 0.86
226 227 6.723052 CCTACTCCCTCCGTTCCTAAATATAA 59.277 42.308 0.00 0.00 0.00 0.98
227 228 7.234166 CCTACTCCCTCCGTTCCTAAATATAAA 59.766 40.741 0.00 0.00 0.00 1.40
228 229 7.628501 ACTCCCTCCGTTCCTAAATATAAAT 57.371 36.000 0.00 0.00 0.00 1.40
229 230 8.042286 ACTCCCTCCGTTCCTAAATATAAATT 57.958 34.615 0.00 0.00 0.00 1.82
230 231 8.500238 ACTCCCTCCGTTCCTAAATATAAATTT 58.500 33.333 0.00 0.00 38.80 1.82
231 232 9.350951 CTCCCTCCGTTCCTAAATATAAATTTT 57.649 33.333 0.00 0.00 36.67 1.82
232 233 9.703677 TCCCTCCGTTCCTAAATATAAATTTTT 57.296 29.630 0.00 0.00 36.67 1.94
263 264 8.836413 ACATTTCAAATGGACTACAATATACGG 58.164 33.333 14.70 0.00 0.00 4.02
264 265 9.051679 CATTTCAAATGGACTACAATATACGGA 57.948 33.333 1.73 0.00 0.00 4.69
265 266 9.793259 ATTTCAAATGGACTACAATATACGGAT 57.207 29.630 0.00 0.00 0.00 4.18
266 267 8.601845 TTCAAATGGACTACAATATACGGATG 57.398 34.615 0.00 0.00 0.00 3.51
267 268 7.732025 TCAAATGGACTACAATATACGGATGT 58.268 34.615 0.00 0.00 0.00 3.06
268 269 8.862085 TCAAATGGACTACAATATACGGATGTA 58.138 33.333 0.00 0.00 34.45 2.29
269 270 9.653287 CAAATGGACTACAATATACGGATGTAT 57.347 33.333 0.00 0.00 43.62 2.29
270 271 9.653287 AAATGGACTACAATATACGGATGTATG 57.347 33.333 0.00 0.00 41.37 2.39
271 272 7.770366 TGGACTACAATATACGGATGTATGT 57.230 36.000 0.00 0.00 41.37 2.29
272 273 8.866970 TGGACTACAATATACGGATGTATGTA 57.133 34.615 0.00 0.00 41.37 2.29
273 274 8.953313 TGGACTACAATATACGGATGTATGTAG 58.047 37.037 19.56 19.56 42.27 2.74
274 275 9.170734 GGACTACAATATACGGATGTATGTAGA 57.829 37.037 24.44 2.20 40.69 2.59
275 276 9.985318 GACTACAATATACGGATGTATGTAGAC 57.015 37.037 24.44 18.37 40.69 2.59
276 277 9.511272 ACTACAATATACGGATGTATGTAGACA 57.489 33.333 24.44 0.00 40.69 3.41
307 308 9.905713 TTAGAGTATGGATTCACTTATTTTGCT 57.094 29.630 0.00 0.00 0.00 3.91
308 309 8.443953 AGAGTATGGATTCACTTATTTTGCTC 57.556 34.615 0.00 0.00 0.00 4.26
309 310 8.270744 AGAGTATGGATTCACTTATTTTGCTCT 58.729 33.333 0.00 0.00 0.00 4.09
310 311 8.218338 AGTATGGATTCACTTATTTTGCTCTG 57.782 34.615 0.00 0.00 0.00 3.35
311 312 7.831193 AGTATGGATTCACTTATTTTGCTCTGT 59.169 33.333 0.00 0.00 0.00 3.41
312 313 9.109393 GTATGGATTCACTTATTTTGCTCTGTA 57.891 33.333 0.00 0.00 0.00 2.74
313 314 8.757982 ATGGATTCACTTATTTTGCTCTGTAT 57.242 30.769 0.00 0.00 0.00 2.29
314 315 7.988737 TGGATTCACTTATTTTGCTCTGTATG 58.011 34.615 0.00 0.00 0.00 2.39
315 316 7.611467 TGGATTCACTTATTTTGCTCTGTATGT 59.389 33.333 0.00 0.00 0.00 2.29
316 317 9.109393 GGATTCACTTATTTTGCTCTGTATGTA 57.891 33.333 0.00 0.00 0.00 2.29
318 319 9.672673 ATTCACTTATTTTGCTCTGTATGTAGT 57.327 29.630 0.00 0.00 0.00 2.73
319 320 8.703604 TCACTTATTTTGCTCTGTATGTAGTC 57.296 34.615 0.00 0.00 0.00 2.59
320 321 8.311109 TCACTTATTTTGCTCTGTATGTAGTCA 58.689 33.333 0.00 0.00 0.00 3.41
321 322 8.383619 CACTTATTTTGCTCTGTATGTAGTCAC 58.616 37.037 0.00 0.00 0.00 3.67
322 323 8.314751 ACTTATTTTGCTCTGTATGTAGTCACT 58.685 33.333 0.00 0.00 0.00 3.41
323 324 9.155975 CTTATTTTGCTCTGTATGTAGTCACTT 57.844 33.333 0.00 0.00 0.00 3.16
324 325 6.785488 TTTTGCTCTGTATGTAGTCACTTG 57.215 37.500 0.00 0.00 0.00 3.16
325 326 5.468540 TTGCTCTGTATGTAGTCACTTGT 57.531 39.130 0.00 0.00 0.00 3.16
326 327 5.468540 TGCTCTGTATGTAGTCACTTGTT 57.531 39.130 0.00 0.00 0.00 2.83
327 328 5.230182 TGCTCTGTATGTAGTCACTTGTTG 58.770 41.667 0.00 0.00 0.00 3.33
328 329 5.010617 TGCTCTGTATGTAGTCACTTGTTGA 59.989 40.000 0.00 0.00 0.00 3.18
329 330 5.926542 GCTCTGTATGTAGTCACTTGTTGAA 59.073 40.000 0.00 0.00 35.39 2.69
330 331 6.423905 GCTCTGTATGTAGTCACTTGTTGAAA 59.576 38.462 0.00 0.00 35.39 2.69
331 332 7.118390 GCTCTGTATGTAGTCACTTGTTGAAAT 59.882 37.037 0.00 0.00 35.39 2.17
332 333 8.310406 TCTGTATGTAGTCACTTGTTGAAATG 57.690 34.615 0.00 0.00 35.39 2.32
333 334 7.931407 TCTGTATGTAGTCACTTGTTGAAATGT 59.069 33.333 0.00 0.00 35.39 2.71
334 335 8.083462 TGTATGTAGTCACTTGTTGAAATGTC 57.917 34.615 0.00 0.00 35.39 3.06
335 336 7.931407 TGTATGTAGTCACTTGTTGAAATGTCT 59.069 33.333 0.00 0.00 35.39 3.41
336 337 9.419297 GTATGTAGTCACTTGTTGAAATGTCTA 57.581 33.333 0.00 0.00 35.39 2.59
337 338 8.902540 ATGTAGTCACTTGTTGAAATGTCTAA 57.097 30.769 0.00 0.00 35.39 2.10
338 339 8.725405 TGTAGTCACTTGTTGAAATGTCTAAA 57.275 30.769 0.00 0.00 35.39 1.85
339 340 9.168451 TGTAGTCACTTGTTGAAATGTCTAAAA 57.832 29.630 0.00 0.00 35.39 1.52
340 341 9.997482 GTAGTCACTTGTTGAAATGTCTAAAAA 57.003 29.630 0.00 0.00 35.39 1.94
342 343 8.956426 AGTCACTTGTTGAAATGTCTAAAAAGA 58.044 29.630 5.49 0.00 35.39 2.52
343 344 9.010366 GTCACTTGTTGAAATGTCTAAAAAGAC 57.990 33.333 0.00 0.00 35.39 3.01
344 345 8.956426 TCACTTGTTGAAATGTCTAAAAAGACT 58.044 29.630 7.04 0.00 39.41 3.24
345 346 9.573133 CACTTGTTGAAATGTCTAAAAAGACTT 57.427 29.630 7.04 0.00 39.41 3.01
362 363 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
363 364 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
364 365 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
365 366 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
366 367 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
367 368 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
368 369 7.232330 ACTTATATTTAGGAACGGAGGGAGTAC 59.768 40.741 0.00 0.00 0.00 2.73
369 370 3.463048 TTTAGGAACGGAGGGAGTACT 57.537 47.619 0.00 0.00 0.00 2.73
370 371 3.463048 TTAGGAACGGAGGGAGTACTT 57.537 47.619 0.00 0.00 0.00 2.24
371 372 2.322339 AGGAACGGAGGGAGTACTTT 57.678 50.000 0.00 0.00 0.00 2.66
372 373 2.617658 AGGAACGGAGGGAGTACTTTT 58.382 47.619 0.00 0.00 0.00 2.27
373 374 3.782992 AGGAACGGAGGGAGTACTTTTA 58.217 45.455 0.00 0.00 0.00 1.52
374 375 4.162651 AGGAACGGAGGGAGTACTTTTAA 58.837 43.478 0.00 0.00 0.00 1.52
375 376 4.594491 AGGAACGGAGGGAGTACTTTTAAA 59.406 41.667 0.00 0.00 0.00 1.52
376 377 5.072193 AGGAACGGAGGGAGTACTTTTAAAA 59.928 40.000 0.00 0.00 0.00 1.52
377 378 5.764686 GGAACGGAGGGAGTACTTTTAAAAA 59.235 40.000 0.00 0.00 0.00 1.94
418 419 4.017130 AGAAAAATAGGACAGGCCCAAGAT 60.017 41.667 0.00 0.00 37.37 2.40
467 477 3.059393 TGAATCGGCTGTATACGTCTACG 60.059 47.826 6.61 0.04 46.33 3.51
483 493 4.796830 CGTCTACGTACAGCAAATATGTGT 59.203 41.667 0.00 0.00 32.02 3.72
489 499 5.163864 ACGTACAGCAAATATGTGTCACATG 60.164 40.000 25.63 13.32 39.53 3.21
492 502 3.009026 AGCAAATATGTGTCACATGCGA 58.991 40.909 25.63 8.86 39.53 5.10
497 507 1.159285 ATGTGTCACATGCGAAGGTG 58.841 50.000 17.74 0.49 37.45 4.00
505 515 1.140252 ACATGCGAAGGTGGGGTATAC 59.860 52.381 0.00 0.00 0.00 1.47
516 526 5.188917 AGGTGGGGTATACCTTATGGTGAC 61.189 50.000 21.25 8.05 46.13 3.67
521 531 5.046087 GGGGTATACCTTATGGTGACCATAC 60.046 48.000 23.20 12.71 46.85 2.39
526 536 5.514500 ACCTTATGGTGACCATACTGTTT 57.486 39.130 23.20 0.00 44.98 2.83
527 537 5.887754 ACCTTATGGTGACCATACTGTTTT 58.112 37.500 23.20 0.00 44.98 2.43
528 538 6.311735 ACCTTATGGTGACCATACTGTTTTT 58.688 36.000 23.20 0.00 44.98 1.94
529 539 7.463431 ACCTTATGGTGACCATACTGTTTTTA 58.537 34.615 23.20 6.06 44.98 1.52
530 540 8.113462 ACCTTATGGTGACCATACTGTTTTTAT 58.887 33.333 23.20 0.00 44.98 1.40
531 541 9.621629 CCTTATGGTGACCATACTGTTTTTATA 57.378 33.333 23.20 4.66 44.98 0.98
533 543 6.971527 TGGTGACCATACTGTTTTTATACG 57.028 37.500 0.00 0.00 0.00 3.06
534 544 5.875910 TGGTGACCATACTGTTTTTATACGG 59.124 40.000 0.00 0.00 0.00 4.02
535 545 5.876460 GGTGACCATACTGTTTTTATACGGT 59.124 40.000 0.00 0.00 40.59 4.83
536 546 6.036408 GGTGACCATACTGTTTTTATACGGTC 59.964 42.308 0.00 0.00 38.53 4.79
537 547 6.815142 GTGACCATACTGTTTTTATACGGTCT 59.185 38.462 0.00 0.00 40.80 3.85
561 571 1.061546 ACGGTTTGTGAGGGGTGTAT 58.938 50.000 0.00 0.00 0.00 2.29
572 582 0.252197 GGGGTGTATCGAAGCAAGGT 59.748 55.000 0.00 0.00 0.00 3.50
610 620 2.221169 TGACGTTTTCTGCTTGATGCT 58.779 42.857 0.00 0.00 43.37 3.79
611 621 2.031769 TGACGTTTTCTGCTTGATGCTG 60.032 45.455 0.00 0.00 43.37 4.41
653 663 6.569127 TTATACAGAAATAAGCAGGGGTCA 57.431 37.500 0.00 0.00 0.00 4.02
655 665 2.912956 ACAGAAATAAGCAGGGGTCAGA 59.087 45.455 0.00 0.00 0.00 3.27
656 666 3.330701 ACAGAAATAAGCAGGGGTCAGAA 59.669 43.478 0.00 0.00 0.00 3.02
657 667 4.018050 ACAGAAATAAGCAGGGGTCAGAAT 60.018 41.667 0.00 0.00 0.00 2.40
658 668 5.191722 ACAGAAATAAGCAGGGGTCAGAATA 59.808 40.000 0.00 0.00 0.00 1.75
659 669 5.529060 CAGAAATAAGCAGGGGTCAGAATAC 59.471 44.000 0.00 0.00 0.00 1.89
660 670 5.191722 AGAAATAAGCAGGGGTCAGAATACA 59.808 40.000 0.00 0.00 0.00 2.29
661 671 4.696479 ATAAGCAGGGGTCAGAATACAG 57.304 45.455 0.00 0.00 0.00 2.74
662 672 2.254152 AGCAGGGGTCAGAATACAGA 57.746 50.000 0.00 0.00 0.00 3.41
668 678 2.370189 GGGGTCAGAATACAGAGGATGG 59.630 54.545 0.00 0.00 0.00 3.51
669 679 2.224402 GGGTCAGAATACAGAGGATGGC 60.224 54.545 0.00 0.00 0.00 4.40
678 688 1.002134 AGAGGATGGCGGGTTGTTG 60.002 57.895 0.00 0.00 0.00 3.33
722 732 6.489700 TCAACTACTCCTGATCTCATCTCATC 59.510 42.308 0.00 0.00 0.00 2.92
780 790 1.667830 TGGTAAGCACAGCTCGCAC 60.668 57.895 7.37 0.00 38.25 5.34
781 791 1.667830 GGTAAGCACAGCTCGCACA 60.668 57.895 7.37 0.00 38.25 4.57
796 806 5.932303 AGCTCGCACAAATCTAAAAGACTAA 59.068 36.000 0.00 0.00 0.00 2.24
800 810 8.776680 TCGCACAAATCTAAAAGACTAAAAAC 57.223 30.769 0.00 0.00 0.00 2.43
801 811 8.399425 TCGCACAAATCTAAAAGACTAAAAACA 58.601 29.630 0.00 0.00 0.00 2.83
802 812 9.180678 CGCACAAATCTAAAAGACTAAAAACAT 57.819 29.630 0.00 0.00 0.00 2.71
965 982 3.068590 CACAAAAACCCAATCAGAGCAGT 59.931 43.478 0.00 0.00 0.00 4.40
966 983 3.068590 ACAAAAACCCAATCAGAGCAGTG 59.931 43.478 0.00 0.00 0.00 3.66
981 1003 1.404047 GCAGTGACAGCTCTCTCTTCC 60.404 57.143 0.00 0.00 0.00 3.46
992 1014 3.820557 CTCTCTCTTCCTCTTCTCCGAT 58.179 50.000 0.00 0.00 0.00 4.18
1035 1057 2.046285 CCTGAACCATGGCCGAACC 61.046 63.158 13.04 0.00 39.84 3.62
1119 1141 2.410774 GCGCGCTGTTATCTGATCAATC 60.411 50.000 26.67 0.00 0.00 2.67
1164 1187 5.975693 TCACTACATTTTTGTTGATCCCC 57.024 39.130 0.00 0.00 0.00 4.81
1171 1194 0.953471 TTTGTTGATCCCCGTCTGCG 60.953 55.000 0.00 0.00 37.95 5.18
1194 1217 1.665679 CCCTGAATTTGGACGATCACG 59.334 52.381 0.00 0.00 45.75 4.35
1196 1219 1.062587 CTGAATTTGGACGATCACGCC 59.937 52.381 0.00 0.00 43.96 5.68
1204 1227 4.470170 CGATCACGCCACGACGGA 62.470 66.667 0.00 0.00 36.56 4.69
1223 1246 3.484229 CGGATCGATGAAAACTTGCAGAC 60.484 47.826 0.54 0.00 0.00 3.51
1244 1322 2.420827 CCCCAATGGTACGTGCTAATCA 60.421 50.000 3.01 0.00 0.00 2.57
1261 1339 5.048013 GCTAATCAGCCACTTAAACTTGGTT 60.048 40.000 0.00 0.00 42.37 3.67
1262 1340 6.150474 GCTAATCAGCCACTTAAACTTGGTTA 59.850 38.462 0.00 0.00 42.37 2.85
1263 1341 6.575162 AATCAGCCACTTAAACTTGGTTAG 57.425 37.500 0.00 0.00 35.09 2.34
1264 1342 5.043737 TCAGCCACTTAAACTTGGTTAGT 57.956 39.130 0.00 0.00 39.32 2.24
1265 1343 4.819630 TCAGCCACTTAAACTTGGTTAGTG 59.180 41.667 0.00 0.00 37.12 2.74
1266 1344 3.568430 AGCCACTTAAACTTGGTTAGTGC 59.432 43.478 0.00 0.00 37.12 4.40
1267 1345 3.316868 GCCACTTAAACTTGGTTAGTGCA 59.683 43.478 0.00 0.00 37.12 4.57
1268 1346 4.202070 GCCACTTAAACTTGGTTAGTGCAA 60.202 41.667 0.00 0.00 37.12 4.08
1269 1347 5.519722 CCACTTAAACTTGGTTAGTGCAAG 58.480 41.667 0.00 0.00 37.12 4.01
1270 1348 5.298276 CCACTTAAACTTGGTTAGTGCAAGA 59.702 40.000 0.00 0.00 37.12 3.02
1271 1349 6.016276 CCACTTAAACTTGGTTAGTGCAAGAT 60.016 38.462 0.00 0.00 37.12 2.40
1272 1350 7.425606 CACTTAAACTTGGTTAGTGCAAGATT 58.574 34.615 0.00 0.00 37.12 2.40
1273 1351 8.564574 CACTTAAACTTGGTTAGTGCAAGATTA 58.435 33.333 0.00 0.00 37.12 1.75
1274 1352 9.127277 ACTTAAACTTGGTTAGTGCAAGATTAA 57.873 29.630 0.00 0.85 37.12 1.40
1276 1354 9.906660 TTAAACTTGGTTAGTGCAAGATTAATG 57.093 29.630 0.00 0.00 37.12 1.90
1277 1355 7.759489 AACTTGGTTAGTGCAAGATTAATGA 57.241 32.000 0.00 0.00 37.12 2.57
1278 1356 7.944729 ACTTGGTTAGTGCAAGATTAATGAT 57.055 32.000 0.00 0.00 35.19 2.45
1279 1357 9.461312 AACTTGGTTAGTGCAAGATTAATGATA 57.539 29.630 0.00 0.00 37.12 2.15
1280 1358 9.113838 ACTTGGTTAGTGCAAGATTAATGATAG 57.886 33.333 0.00 0.00 35.19 2.08
1281 1359 9.330063 CTTGGTTAGTGCAAGATTAATGATAGA 57.670 33.333 0.00 0.00 0.00 1.98
1282 1360 8.662781 TGGTTAGTGCAAGATTAATGATAGAC 57.337 34.615 0.00 0.00 0.00 2.59
1283 1361 7.715249 TGGTTAGTGCAAGATTAATGATAGACC 59.285 37.037 0.00 0.00 0.00 3.85
1284 1362 7.715249 GGTTAGTGCAAGATTAATGATAGACCA 59.285 37.037 0.00 0.00 0.00 4.02
1285 1363 9.277783 GTTAGTGCAAGATTAATGATAGACCAT 57.722 33.333 0.00 0.00 0.00 3.55
1286 1364 7.741027 AGTGCAAGATTAATGATAGACCATG 57.259 36.000 0.00 0.00 0.00 3.66
1287 1365 7.512130 AGTGCAAGATTAATGATAGACCATGA 58.488 34.615 0.00 0.00 0.00 3.07
1288 1366 7.660617 AGTGCAAGATTAATGATAGACCATGAG 59.339 37.037 0.00 0.00 0.00 2.90
1289 1367 6.429078 TGCAAGATTAATGATAGACCATGAGC 59.571 38.462 0.00 0.00 0.00 4.26
1290 1368 6.654161 GCAAGATTAATGATAGACCATGAGCT 59.346 38.462 0.00 0.00 0.00 4.09
1291 1369 7.821359 GCAAGATTAATGATAGACCATGAGCTA 59.179 37.037 0.00 0.00 0.00 3.32
1292 1370 9.368674 CAAGATTAATGATAGACCATGAGCTAG 57.631 37.037 0.00 0.00 0.00 3.42
1293 1371 8.663209 AGATTAATGATAGACCATGAGCTAGT 57.337 34.615 0.00 0.00 0.00 2.57
1294 1372 9.099071 AGATTAATGATAGACCATGAGCTAGTT 57.901 33.333 0.00 0.00 0.00 2.24
1308 1386 6.497785 TGAGCTAGTTAGAGTGACAGTTAC 57.502 41.667 0.00 0.00 0.00 2.50
1316 1394 4.667519 AGAGTGACAGTTACTTTCCGTT 57.332 40.909 0.00 0.00 0.00 4.44
1318 1396 2.870411 AGTGACAGTTACTTTCCGTTGC 59.130 45.455 0.00 0.00 0.00 4.17
1610 1688 2.282180 GCCTTCGCCAAGAACCCA 60.282 61.111 0.00 0.00 34.66 4.51
2304 2400 1.984570 CTGAGGAGGAAGCGGGTCA 60.985 63.158 0.00 0.00 0.00 4.02
2306 2402 1.985116 GAGGAGGAAGCGGGTCAGT 60.985 63.158 0.00 0.00 0.00 3.41
2612 2708 2.048222 ATGTGCACCGACCTCACG 60.048 61.111 15.69 0.00 33.69 4.35
2671 2775 8.632679 ACAAAACATGACAGTTTGTGAATCTAT 58.367 29.630 15.54 0.00 40.60 1.98
2672 2776 9.121517 CAAAACATGACAGTTTGTGAATCTATC 57.878 33.333 0.00 0.00 40.60 2.08
2673 2777 8.627208 AAACATGACAGTTTGTGAATCTATCT 57.373 30.769 0.00 0.00 40.03 1.98
2674 2778 9.725019 AAACATGACAGTTTGTGAATCTATCTA 57.275 29.630 0.00 0.00 40.03 1.98
2700 2804 8.641541 AGAAAGAAAAGGCATGTAAATTTCTGA 58.358 29.630 14.34 0.00 39.54 3.27
2747 2896 0.031314 ATGCGCAGGTCATCTACGAG 59.969 55.000 18.32 0.00 34.29 4.18
2868 3018 8.398665 GTCCATTTGCCTTGAAAACTAGTATAG 58.601 37.037 0.00 0.00 46.50 1.31
2871 3021 4.777463 TGCCTTGAAAACTAGTATAGGCC 58.223 43.478 21.20 0.00 44.97 5.19
2894 3044 2.606795 GGCATACGCACACAAACAACAT 60.607 45.455 0.00 0.00 41.24 2.71
2895 3045 2.404693 GCATACGCACACAAACAACATG 59.595 45.455 0.00 0.00 38.36 3.21
2896 3046 2.765108 TACGCACACAAACAACATGG 57.235 45.000 0.00 0.00 0.00 3.66
2907 3057 2.949177 ACAACATGGTACCAAGCAGA 57.051 45.000 20.76 0.00 36.36 4.26
2927 3252 4.049186 AGACCGATATCATTAACACACGC 58.951 43.478 3.12 0.00 0.00 5.34
3209 3534 8.781067 TTTGCGATGATTTATCCTATTTTTCG 57.219 30.769 0.00 0.00 31.82 3.46
3210 3535 7.490962 TGCGATGATTTATCCTATTTTTCGT 57.509 32.000 0.00 0.00 31.82 3.85
3211 3536 8.596271 TGCGATGATTTATCCTATTTTTCGTA 57.404 30.769 0.00 0.00 31.82 3.43
3212 3537 9.047371 TGCGATGATTTATCCTATTTTTCGTAA 57.953 29.630 0.00 0.00 31.82 3.18
3244 3569 4.853924 ATTGGAAACATGTTGGAGTGAC 57.146 40.909 12.82 0.00 42.32 3.67
3255 3580 7.458397 ACATGTTGGAGTGACTAAGGATTAAA 58.542 34.615 0.00 0.00 0.00 1.52
3256 3581 8.109634 ACATGTTGGAGTGACTAAGGATTAAAT 58.890 33.333 0.00 0.00 0.00 1.40
3285 3610 7.548196 TTTAGTAAATGGAGCGTAGGATTTG 57.452 36.000 0.00 0.00 0.00 2.32
3286 3611 5.353394 AGTAAATGGAGCGTAGGATTTGA 57.647 39.130 0.00 0.00 0.00 2.69
3287 3612 5.930135 AGTAAATGGAGCGTAGGATTTGAT 58.070 37.500 0.00 0.00 0.00 2.57
3288 3613 6.357367 AGTAAATGGAGCGTAGGATTTGATT 58.643 36.000 0.00 0.00 0.00 2.57
3289 3614 5.757850 AAATGGAGCGTAGGATTTGATTC 57.242 39.130 0.00 0.00 0.00 2.52
3290 3615 2.821546 TGGAGCGTAGGATTTGATTCG 58.178 47.619 0.00 0.00 0.00 3.34
3291 3616 2.429250 TGGAGCGTAGGATTTGATTCGA 59.571 45.455 0.00 0.00 0.00 3.71
3292 3617 3.053455 GGAGCGTAGGATTTGATTCGAG 58.947 50.000 0.00 0.00 0.00 4.04
3293 3618 2.473235 GAGCGTAGGATTTGATTCGAGC 59.527 50.000 0.00 0.00 0.00 5.03
3294 3619 2.159099 AGCGTAGGATTTGATTCGAGCA 60.159 45.455 0.00 0.00 0.00 4.26
3295 3620 2.607635 GCGTAGGATTTGATTCGAGCAA 59.392 45.455 0.00 0.00 0.00 3.91
3296 3621 3.063452 GCGTAGGATTTGATTCGAGCAAA 59.937 43.478 15.04 15.04 39.31 3.68
3304 3629 2.993545 TGATTCGAGCAAACGGTTTTG 58.006 42.857 2.79 1.45 44.42 2.44
3322 3647 6.913132 CGGTTTTGTGTTGTATCATGTGTTTA 59.087 34.615 0.00 0.00 0.00 2.01
3324 3649 8.698854 GGTTTTGTGTTGTATCATGTGTTTATG 58.301 33.333 0.00 0.00 0.00 1.90
3354 3679 8.857216 CATCTCTTGTTTTAGATGCATTGTTTC 58.143 33.333 0.00 0.00 41.80 2.78
3361 3686 6.676237 TTTAGATGCATTGTTTCTATCGCA 57.324 33.333 0.00 0.00 0.00 5.10
3375 3701 6.653273 TTCTATCGCATCTCTGTTTTTGAG 57.347 37.500 0.00 0.00 0.00 3.02
3383 3709 6.129273 CGCATCTCTGTTTTTGAGATTGTTTG 60.129 38.462 3.79 0.00 45.74 2.93
3385 3711 7.306399 GCATCTCTGTTTTTGAGATTGTTTGTG 60.306 37.037 3.79 0.00 45.74 3.33
3388 3714 3.862267 TGTTTTTGAGATTGTTTGTGCCG 59.138 39.130 0.00 0.00 0.00 5.69
3393 3719 1.804151 GAGATTGTTTGTGCCGCTACA 59.196 47.619 0.00 0.00 0.00 2.74
3403 3729 1.521681 GCCGCTACAGCCCTTACTG 60.522 63.158 0.00 0.00 43.59 2.74
3412 3738 3.402628 CAGCCCTTACTGTGTGTAACT 57.597 47.619 0.00 0.00 36.33 2.24
3419 3745 2.433868 ACTGTGTGTAACTAGTGGCG 57.566 50.000 0.00 0.00 38.04 5.69
3432 3758 4.984194 TGGCGGATCCAGGAATTG 57.016 55.556 13.41 0.00 40.72 2.32
3433 3759 2.306124 TGGCGGATCCAGGAATTGA 58.694 52.632 13.41 0.00 40.72 2.57
3451 3777 9.226606 AGGAATTGAAGTAACGAACATTCAATA 57.773 29.630 17.21 0.54 46.38 1.90
3530 3857 4.759516 TGAAAGGGCATAAGTTTTCGAC 57.240 40.909 0.00 0.00 33.40 4.20
3554 3881 7.271511 ACTGAAGCATAAGAAGGTCTCTATTG 58.728 38.462 0.00 0.00 32.46 1.90
3564 3892 4.851639 AGGTCTCTATTGACATGGCTTT 57.148 40.909 0.00 0.00 38.61 3.51
3572 3900 8.203485 TCTCTATTGACATGGCTTTTTGTTTTT 58.797 29.630 0.00 0.00 0.00 1.94
3644 3972 9.929180 ACATGTCATAGAAATAATACGCTATGT 57.071 29.630 0.00 0.00 40.48 2.29
3653 3981 9.257651 AGAAATAATACGCTATGTACTTTGACC 57.742 33.333 0.00 0.00 35.44 4.02
3654 3982 8.951787 AAATAATACGCTATGTACTTTGACCA 57.048 30.769 0.00 0.00 35.44 4.02
3655 3983 9.555727 AAATAATACGCTATGTACTTTGACCAT 57.444 29.630 0.00 0.00 35.44 3.55
3658 3986 8.951787 AATACGCTATGTACTTTGACCATAAA 57.048 30.769 0.00 0.00 35.44 1.40
3659 3987 6.657836 ACGCTATGTACTTTGACCATAAAC 57.342 37.500 0.00 0.00 0.00 2.01
3668 5479 5.205056 ACTTTGACCATAAACTTCCACCAA 58.795 37.500 0.00 0.00 0.00 3.67
3672 5483 2.158385 ACCATAAACTTCCACCAAGCCA 60.158 45.455 0.00 0.00 35.17 4.75
3681 5492 0.038744 CCACCAAGCCAGAACATCCT 59.961 55.000 0.00 0.00 0.00 3.24
3682 5493 1.171308 CACCAAGCCAGAACATCCTG 58.829 55.000 0.00 0.00 0.00 3.86
3701 5512 2.816087 CTGGATGGGTGTTCTTCAAGTG 59.184 50.000 0.00 0.00 0.00 3.16
3736 5547 6.469410 AGGGTATGTACTTGTTTTGATTCGA 58.531 36.000 0.00 0.00 0.00 3.71
3749 5560 5.984233 TTTGATTCGATTATTCACCGGAG 57.016 39.130 9.46 0.00 0.00 4.63
3773 5584 1.638467 GCAATGTCGGACGCTCATC 59.362 57.895 3.34 0.00 0.00 2.92
3801 5615 7.759489 TTGCTCAAGTGTGTAGGATAAATTT 57.241 32.000 0.00 0.00 0.00 1.82
3802 5616 7.144722 TGCTCAAGTGTGTAGGATAAATTTG 57.855 36.000 0.00 0.00 0.00 2.32
3805 5619 7.119846 GCTCAAGTGTGTAGGATAAATTTGAGT 59.880 37.037 0.00 0.00 40.45 3.41
3813 5627 9.836076 GTGTAGGATAAATTTGAGTTTTGGTAC 57.164 33.333 0.00 0.00 0.00 3.34
3814 5628 9.016438 TGTAGGATAAATTTGAGTTTTGGTACC 57.984 33.333 4.43 4.43 0.00 3.34
3827 5641 5.013391 AGTTTTGGTACCGGGAAGAAGATTA 59.987 40.000 6.32 0.00 0.00 1.75
3836 5650 4.262036 CCGGGAAGAAGATTACATCGATCA 60.262 45.833 0.00 0.00 0.00 2.92
3837 5651 5.473931 CGGGAAGAAGATTACATCGATCAT 58.526 41.667 0.00 0.00 0.00 2.45
3840 5654 7.041780 CGGGAAGAAGATTACATCGATCATTTT 60.042 37.037 0.00 0.00 0.00 1.82
3929 5744 3.519908 CGAAGCAACTCGAATTTGTCA 57.480 42.857 7.95 0.00 41.44 3.58
3935 5750 4.084507 GCAACTCGAATTTGTCAGAATCG 58.915 43.478 7.95 0.00 0.00 3.34
3961 5780 2.029470 AGAAGTGTGGAAGCTCGAGAAG 60.029 50.000 18.75 0.00 0.00 2.85
3979 5798 5.006165 CGAGAAGCCAATACAGAGAATCAAC 59.994 44.000 0.00 0.00 37.82 3.18
4021 5840 7.573968 AATATTAATCCAACTTGTGAGAGCC 57.426 36.000 0.00 0.00 0.00 4.70
4022 5841 2.957402 AATCCAACTTGTGAGAGCCA 57.043 45.000 0.00 0.00 0.00 4.75
4027 5846 4.264253 TCCAACTTGTGAGAGCCATTATG 58.736 43.478 0.00 0.00 0.00 1.90
4038 5857 6.096001 GTGAGAGCCATTATGAAAGTTGGATT 59.904 38.462 0.00 0.00 0.00 3.01
4040 5859 7.178983 TGAGAGCCATTATGAAAGTTGGATTTT 59.821 33.333 0.00 0.00 0.00 1.82
4078 5898 8.791327 AATTGTGGTTCTTGTTTTCTTTGATT 57.209 26.923 0.00 0.00 0.00 2.57
4100 5923 7.591057 TGATTTTGTTCTTGTAGCGAAGAATTG 59.409 33.333 10.53 0.00 42.49 2.32
4117 5940 9.045223 CGAAGAATTGATGAATTATGTACTCCA 57.955 33.333 0.00 0.00 31.58 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 2.814336 GCATCTTCTCGGTCCAGTTTTT 59.186 45.455 0.00 0.00 0.00 1.94
75 76 2.224523 TGCATCTTCTCGGTCCAGTTTT 60.225 45.455 0.00 0.00 0.00 2.43
76 77 1.347707 TGCATCTTCTCGGTCCAGTTT 59.652 47.619 0.00 0.00 0.00 2.66
77 78 0.976641 TGCATCTTCTCGGTCCAGTT 59.023 50.000 0.00 0.00 0.00 3.16
78 79 0.247736 GTGCATCTTCTCGGTCCAGT 59.752 55.000 0.00 0.00 0.00 4.00
79 80 0.247460 TGTGCATCTTCTCGGTCCAG 59.753 55.000 0.00 0.00 0.00 3.86
80 81 0.684535 TTGTGCATCTTCTCGGTCCA 59.315 50.000 0.00 0.00 0.00 4.02
81 82 1.079503 GTTGTGCATCTTCTCGGTCC 58.920 55.000 0.00 0.00 0.00 4.46
82 83 1.795768 TGTTGTGCATCTTCTCGGTC 58.204 50.000 0.00 0.00 0.00 4.79
83 84 2.254546 TTGTTGTGCATCTTCTCGGT 57.745 45.000 0.00 0.00 0.00 4.69
84 85 3.624326 TTTTGTTGTGCATCTTCTCGG 57.376 42.857 0.00 0.00 0.00 4.63
85 86 4.847633 TCTTTTTGTTGTGCATCTTCTCG 58.152 39.130 0.00 0.00 0.00 4.04
86 87 6.441274 TCATCTTTTTGTTGTGCATCTTCTC 58.559 36.000 0.00 0.00 0.00 2.87
87 88 6.395426 TCATCTTTTTGTTGTGCATCTTCT 57.605 33.333 0.00 0.00 0.00 2.85
88 89 7.436080 TCTTTCATCTTTTTGTTGTGCATCTTC 59.564 33.333 0.00 0.00 0.00 2.87
89 90 7.267128 TCTTTCATCTTTTTGTTGTGCATCTT 58.733 30.769 0.00 0.00 0.00 2.40
90 91 6.808829 TCTTTCATCTTTTTGTTGTGCATCT 58.191 32.000 0.00 0.00 0.00 2.90
91 92 7.223387 ACTTCTTTCATCTTTTTGTTGTGCATC 59.777 33.333 0.00 0.00 0.00 3.91
92 93 7.043565 ACTTCTTTCATCTTTTTGTTGTGCAT 58.956 30.769 0.00 0.00 0.00 3.96
93 94 6.397272 ACTTCTTTCATCTTTTTGTTGTGCA 58.603 32.000 0.00 0.00 0.00 4.57
94 95 6.892310 ACTTCTTTCATCTTTTTGTTGTGC 57.108 33.333 0.00 0.00 0.00 4.57
95 96 9.573133 AACTACTTCTTTCATCTTTTTGTTGTG 57.427 29.630 0.00 0.00 0.00 3.33
99 100 8.568794 GCCTAACTACTTCTTTCATCTTTTTGT 58.431 33.333 0.00 0.00 0.00 2.83
100 101 8.567948 TGCCTAACTACTTCTTTCATCTTTTTG 58.432 33.333 0.00 0.00 0.00 2.44
101 102 8.691661 TGCCTAACTACTTCTTTCATCTTTTT 57.308 30.769 0.00 0.00 0.00 1.94
102 103 8.870075 ATGCCTAACTACTTCTTTCATCTTTT 57.130 30.769 0.00 0.00 0.00 2.27
103 104 9.959721 TTATGCCTAACTACTTCTTTCATCTTT 57.040 29.630 0.00 0.00 0.00 2.52
104 105 9.384764 GTTATGCCTAACTACTTCTTTCATCTT 57.615 33.333 4.79 0.00 35.38 2.40
105 106 8.540388 TGTTATGCCTAACTACTTCTTTCATCT 58.460 33.333 12.31 0.00 38.44 2.90
106 107 8.718102 TGTTATGCCTAACTACTTCTTTCATC 57.282 34.615 12.31 0.00 38.44 2.92
107 108 9.167311 CTTGTTATGCCTAACTACTTCTTTCAT 57.833 33.333 12.31 0.00 38.44 2.57
108 109 8.154856 ACTTGTTATGCCTAACTACTTCTTTCA 58.845 33.333 12.31 0.00 38.44 2.69
109 110 8.443937 CACTTGTTATGCCTAACTACTTCTTTC 58.556 37.037 12.31 0.00 38.44 2.62
110 111 8.154856 TCACTTGTTATGCCTAACTACTTCTTT 58.845 33.333 12.31 0.00 38.44 2.52
111 112 7.676947 TCACTTGTTATGCCTAACTACTTCTT 58.323 34.615 12.31 0.00 38.44 2.52
112 113 7.241042 TCACTTGTTATGCCTAACTACTTCT 57.759 36.000 12.31 0.00 38.44 2.85
113 114 6.036191 GCTCACTTGTTATGCCTAACTACTTC 59.964 42.308 12.31 0.00 38.44 3.01
114 115 5.875359 GCTCACTTGTTATGCCTAACTACTT 59.125 40.000 12.31 0.00 38.44 2.24
115 116 5.187967 AGCTCACTTGTTATGCCTAACTACT 59.812 40.000 12.31 0.00 38.44 2.57
116 117 5.292101 CAGCTCACTTGTTATGCCTAACTAC 59.708 44.000 12.31 0.00 38.44 2.73
117 118 5.186992 TCAGCTCACTTGTTATGCCTAACTA 59.813 40.000 12.31 4.95 38.44 2.24
118 119 4.020218 TCAGCTCACTTGTTATGCCTAACT 60.020 41.667 12.31 0.00 38.44 2.24
119 120 4.253685 TCAGCTCACTTGTTATGCCTAAC 58.746 43.478 5.05 5.05 38.17 2.34
120 121 4.507710 CTCAGCTCACTTGTTATGCCTAA 58.492 43.478 0.00 0.00 0.00 2.69
121 122 3.679917 GCTCAGCTCACTTGTTATGCCTA 60.680 47.826 0.00 0.00 0.00 3.93
122 123 2.938756 GCTCAGCTCACTTGTTATGCCT 60.939 50.000 0.00 0.00 0.00 4.75
123 124 1.399791 GCTCAGCTCACTTGTTATGCC 59.600 52.381 0.00 0.00 0.00 4.40
124 125 2.095532 CAGCTCAGCTCACTTGTTATGC 59.904 50.000 0.00 0.00 36.40 3.14
125 126 3.332919 ACAGCTCAGCTCACTTGTTATG 58.667 45.455 0.00 0.00 36.40 1.90
126 127 3.594134 GACAGCTCAGCTCACTTGTTAT 58.406 45.455 0.00 0.00 36.40 1.89
127 128 2.289072 GGACAGCTCAGCTCACTTGTTA 60.289 50.000 0.00 0.00 36.40 2.41
128 129 1.542108 GGACAGCTCAGCTCACTTGTT 60.542 52.381 0.00 0.00 36.40 2.83
129 130 0.034616 GGACAGCTCAGCTCACTTGT 59.965 55.000 0.00 0.00 36.40 3.16
130 131 0.673022 GGGACAGCTCAGCTCACTTG 60.673 60.000 0.00 0.00 36.40 3.16
131 132 1.123861 TGGGACAGCTCAGCTCACTT 61.124 55.000 0.00 0.00 36.40 3.16
132 133 1.123861 TTGGGACAGCTCAGCTCACT 61.124 55.000 0.00 0.00 42.39 3.41
133 134 0.035630 ATTGGGACAGCTCAGCTCAC 60.036 55.000 0.00 0.00 42.39 3.51
134 135 0.694771 AATTGGGACAGCTCAGCTCA 59.305 50.000 0.00 0.00 42.39 4.26
135 136 2.093235 ACTAATTGGGACAGCTCAGCTC 60.093 50.000 0.00 0.00 42.39 4.09
136 137 1.912043 ACTAATTGGGACAGCTCAGCT 59.088 47.619 0.00 0.00 42.39 4.24
137 138 2.409948 ACTAATTGGGACAGCTCAGC 57.590 50.000 0.00 0.00 42.39 4.26
138 139 5.352569 CACTTTACTAATTGGGACAGCTCAG 59.647 44.000 0.00 0.00 42.39 3.35
139 140 5.012664 TCACTTTACTAATTGGGACAGCTCA 59.987 40.000 0.00 0.00 42.39 4.26
140 141 5.488341 TCACTTTACTAATTGGGACAGCTC 58.512 41.667 0.00 0.00 42.39 4.09
141 142 5.013183 ACTCACTTTACTAATTGGGACAGCT 59.987 40.000 0.00 0.00 42.39 4.24
142 143 5.122396 CACTCACTTTACTAATTGGGACAGC 59.878 44.000 0.00 0.00 42.39 4.40
143 144 5.643777 CCACTCACTTTACTAATTGGGACAG 59.356 44.000 0.00 0.00 42.39 3.51
144 145 5.308497 TCCACTCACTTTACTAATTGGGACA 59.692 40.000 0.00 0.00 0.00 4.02
145 146 5.801380 TCCACTCACTTTACTAATTGGGAC 58.199 41.667 0.00 0.00 0.00 4.46
146 147 6.043938 ACTTCCACTCACTTTACTAATTGGGA 59.956 38.462 0.00 0.00 0.00 4.37
147 148 6.238648 ACTTCCACTCACTTTACTAATTGGG 58.761 40.000 0.00 0.00 0.00 4.12
148 149 8.842358 TTACTTCCACTCACTTTACTAATTGG 57.158 34.615 0.00 0.00 0.00 3.16
153 154 9.706691 CTTGATTTACTTCCACTCACTTTACTA 57.293 33.333 0.00 0.00 0.00 1.82
154 155 8.429641 TCTTGATTTACTTCCACTCACTTTACT 58.570 33.333 0.00 0.00 0.00 2.24
155 156 8.603242 TCTTGATTTACTTCCACTCACTTTAC 57.397 34.615 0.00 0.00 0.00 2.01
156 157 9.273016 CTTCTTGATTTACTTCCACTCACTTTA 57.727 33.333 0.00 0.00 0.00 1.85
157 158 7.775561 ACTTCTTGATTTACTTCCACTCACTTT 59.224 33.333 0.00 0.00 0.00 2.66
158 159 7.283329 ACTTCTTGATTTACTTCCACTCACTT 58.717 34.615 0.00 0.00 0.00 3.16
159 160 6.831976 ACTTCTTGATTTACTTCCACTCACT 58.168 36.000 0.00 0.00 0.00 3.41
160 161 7.355778 CAACTTCTTGATTTACTTCCACTCAC 58.644 38.462 0.00 0.00 0.00 3.51
161 162 6.486657 CCAACTTCTTGATTTACTTCCACTCA 59.513 38.462 0.00 0.00 0.00 3.41
162 163 6.072452 CCCAACTTCTTGATTTACTTCCACTC 60.072 42.308 0.00 0.00 0.00 3.51
163 164 5.770162 CCCAACTTCTTGATTTACTTCCACT 59.230 40.000 0.00 0.00 0.00 4.00
164 165 5.768164 TCCCAACTTCTTGATTTACTTCCAC 59.232 40.000 0.00 0.00 0.00 4.02
165 166 5.947663 TCCCAACTTCTTGATTTACTTCCA 58.052 37.500 0.00 0.00 0.00 3.53
166 167 6.004574 ACTCCCAACTTCTTGATTTACTTCC 58.995 40.000 0.00 0.00 0.00 3.46
167 168 7.228706 TGAACTCCCAACTTCTTGATTTACTTC 59.771 37.037 0.00 0.00 0.00 3.01
168 169 7.060421 TGAACTCCCAACTTCTTGATTTACTT 58.940 34.615 0.00 0.00 0.00 2.24
169 170 6.601332 TGAACTCCCAACTTCTTGATTTACT 58.399 36.000 0.00 0.00 0.00 2.24
170 171 6.877611 TGAACTCCCAACTTCTTGATTTAC 57.122 37.500 0.00 0.00 0.00 2.01
171 172 7.272037 GTTGAACTCCCAACTTCTTGATTTA 57.728 36.000 0.00 0.00 42.20 1.40
172 173 6.149129 GTTGAACTCCCAACTTCTTGATTT 57.851 37.500 0.00 0.00 42.20 2.17
173 174 5.774498 GTTGAACTCCCAACTTCTTGATT 57.226 39.130 0.00 0.00 42.20 2.57
182 183 2.152016 GGTGCTAGTTGAACTCCCAAC 58.848 52.381 0.00 0.00 44.92 3.77
183 184 2.054799 AGGTGCTAGTTGAACTCCCAA 58.945 47.619 0.00 0.00 0.00 4.12
184 185 1.729586 AGGTGCTAGTTGAACTCCCA 58.270 50.000 0.00 0.00 0.00 4.37
185 186 2.832733 AGTAGGTGCTAGTTGAACTCCC 59.167 50.000 0.00 0.00 0.00 4.30
186 187 3.119065 GGAGTAGGTGCTAGTTGAACTCC 60.119 52.174 0.00 13.80 43.27 3.85
187 188 3.119065 GGGAGTAGGTGCTAGTTGAACTC 60.119 52.174 0.00 0.00 32.92 3.01
188 189 2.832733 GGGAGTAGGTGCTAGTTGAACT 59.167 50.000 2.37 2.37 0.00 3.01
189 190 2.832733 AGGGAGTAGGTGCTAGTTGAAC 59.167 50.000 0.00 0.00 0.00 3.18
190 191 3.097614 GAGGGAGTAGGTGCTAGTTGAA 58.902 50.000 0.00 0.00 0.00 2.69
191 192 2.623502 GGAGGGAGTAGGTGCTAGTTGA 60.624 54.545 0.00 0.00 0.00 3.18
192 193 1.757699 GGAGGGAGTAGGTGCTAGTTG 59.242 57.143 0.00 0.00 0.00 3.16
193 194 1.685491 CGGAGGGAGTAGGTGCTAGTT 60.685 57.143 0.00 0.00 0.00 2.24
194 195 0.106619 CGGAGGGAGTAGGTGCTAGT 60.107 60.000 0.00 0.00 0.00 2.57
195 196 0.106619 ACGGAGGGAGTAGGTGCTAG 60.107 60.000 0.00 0.00 0.00 3.42
196 197 0.333993 AACGGAGGGAGTAGGTGCTA 59.666 55.000 0.00 0.00 0.00 3.49
197 198 0.971447 GAACGGAGGGAGTAGGTGCT 60.971 60.000 0.00 0.00 0.00 4.40
198 199 1.516423 GAACGGAGGGAGTAGGTGC 59.484 63.158 0.00 0.00 0.00 5.01
199 200 0.324460 AGGAACGGAGGGAGTAGGTG 60.324 60.000 0.00 0.00 0.00 4.00
200 201 1.302907 TAGGAACGGAGGGAGTAGGT 58.697 55.000 0.00 0.00 0.00 3.08
201 202 2.449137 TTAGGAACGGAGGGAGTAGG 57.551 55.000 0.00 0.00 0.00 3.18
202 203 7.771927 TTATATTTAGGAACGGAGGGAGTAG 57.228 40.000 0.00 0.00 0.00 2.57
203 204 8.731591 ATTTATATTTAGGAACGGAGGGAGTA 57.268 34.615 0.00 0.00 0.00 2.59
204 205 7.628501 ATTTATATTTAGGAACGGAGGGAGT 57.371 36.000 0.00 0.00 0.00 3.85
205 206 8.919777 AAATTTATATTTAGGAACGGAGGGAG 57.080 34.615 0.00 0.00 32.25 4.30
206 207 9.703677 AAAAATTTATATTTAGGAACGGAGGGA 57.296 29.630 0.00 0.00 32.85 4.20
237 238 8.836413 CCGTATATTGTAGTCCATTTGAAATGT 58.164 33.333 15.93 1.43 0.00 2.71
238 239 9.051679 TCCGTATATTGTAGTCCATTTGAAATG 57.948 33.333 10.84 10.84 0.00 2.32
239 240 9.793259 ATCCGTATATTGTAGTCCATTTGAAAT 57.207 29.630 0.00 0.00 0.00 2.17
240 241 9.051679 CATCCGTATATTGTAGTCCATTTGAAA 57.948 33.333 0.00 0.00 0.00 2.69
241 242 8.208224 ACATCCGTATATTGTAGTCCATTTGAA 58.792 33.333 0.00 0.00 0.00 2.69
242 243 7.732025 ACATCCGTATATTGTAGTCCATTTGA 58.268 34.615 0.00 0.00 0.00 2.69
243 244 7.962964 ACATCCGTATATTGTAGTCCATTTG 57.037 36.000 0.00 0.00 0.00 2.32
244 245 9.653287 CATACATCCGTATATTGTAGTCCATTT 57.347 33.333 0.00 0.00 36.11 2.32
245 246 8.812972 ACATACATCCGTATATTGTAGTCCATT 58.187 33.333 0.00 0.00 36.11 3.16
246 247 8.362464 ACATACATCCGTATATTGTAGTCCAT 57.638 34.615 0.00 0.00 36.11 3.41
247 248 7.770366 ACATACATCCGTATATTGTAGTCCA 57.230 36.000 0.00 0.00 36.11 4.02
248 249 9.170734 TCTACATACATCCGTATATTGTAGTCC 57.829 37.037 0.00 0.00 38.60 3.85
249 250 9.985318 GTCTACATACATCCGTATATTGTAGTC 57.015 37.037 0.00 0.00 38.60 2.59
250 251 9.511272 TGTCTACATACATCCGTATATTGTAGT 57.489 33.333 0.00 0.00 38.60 2.73
281 282 9.905713 AGCAAAATAAGTGAATCCATACTCTAA 57.094 29.630 0.00 0.00 0.00 2.10
282 283 9.547753 GAGCAAAATAAGTGAATCCATACTCTA 57.452 33.333 0.00 0.00 0.00 2.43
283 284 8.270744 AGAGCAAAATAAGTGAATCCATACTCT 58.729 33.333 0.00 0.00 0.00 3.24
284 285 8.341173 CAGAGCAAAATAAGTGAATCCATACTC 58.659 37.037 0.00 0.00 0.00 2.59
285 286 7.831193 ACAGAGCAAAATAAGTGAATCCATACT 59.169 33.333 0.00 0.00 0.00 2.12
286 287 7.989826 ACAGAGCAAAATAAGTGAATCCATAC 58.010 34.615 0.00 0.00 0.00 2.39
287 288 9.851686 ATACAGAGCAAAATAAGTGAATCCATA 57.148 29.630 0.00 0.00 0.00 2.74
288 289 8.627403 CATACAGAGCAAAATAAGTGAATCCAT 58.373 33.333 0.00 0.00 0.00 3.41
289 290 7.611467 ACATACAGAGCAAAATAAGTGAATCCA 59.389 33.333 0.00 0.00 0.00 3.41
290 291 7.989826 ACATACAGAGCAAAATAAGTGAATCC 58.010 34.615 0.00 0.00 0.00 3.01
292 293 9.672673 ACTACATACAGAGCAAAATAAGTGAAT 57.327 29.630 0.00 0.00 0.00 2.57
293 294 9.151471 GACTACATACAGAGCAAAATAAGTGAA 57.849 33.333 0.00 0.00 0.00 3.18
294 295 8.311109 TGACTACATACAGAGCAAAATAAGTGA 58.689 33.333 0.00 0.00 0.00 3.41
295 296 8.383619 GTGACTACATACAGAGCAAAATAAGTG 58.616 37.037 0.00 0.00 0.00 3.16
296 297 8.314751 AGTGACTACATACAGAGCAAAATAAGT 58.685 33.333 0.00 0.00 0.00 2.24
297 298 8.709386 AGTGACTACATACAGAGCAAAATAAG 57.291 34.615 0.00 0.00 0.00 1.73
298 299 8.935844 CAAGTGACTACATACAGAGCAAAATAA 58.064 33.333 0.00 0.00 0.00 1.40
299 300 8.094548 ACAAGTGACTACATACAGAGCAAAATA 58.905 33.333 0.00 0.00 0.00 1.40
300 301 6.936900 ACAAGTGACTACATACAGAGCAAAAT 59.063 34.615 0.00 0.00 0.00 1.82
301 302 6.288294 ACAAGTGACTACATACAGAGCAAAA 58.712 36.000 0.00 0.00 0.00 2.44
302 303 5.853936 ACAAGTGACTACATACAGAGCAAA 58.146 37.500 0.00 0.00 0.00 3.68
303 304 5.468540 ACAAGTGACTACATACAGAGCAA 57.531 39.130 0.00 0.00 0.00 3.91
304 305 5.010617 TCAACAAGTGACTACATACAGAGCA 59.989 40.000 0.00 0.00 0.00 4.26
305 306 5.470368 TCAACAAGTGACTACATACAGAGC 58.530 41.667 0.00 0.00 0.00 4.09
306 307 7.946655 TTTCAACAAGTGACTACATACAGAG 57.053 36.000 0.00 0.00 35.39 3.35
307 308 7.931407 ACATTTCAACAAGTGACTACATACAGA 59.069 33.333 0.00 0.00 35.39 3.41
308 309 8.087982 ACATTTCAACAAGTGACTACATACAG 57.912 34.615 0.00 0.00 35.39 2.74
309 310 7.931407 AGACATTTCAACAAGTGACTACATACA 59.069 33.333 0.00 0.00 35.39 2.29
310 311 8.311650 AGACATTTCAACAAGTGACTACATAC 57.688 34.615 0.00 0.00 35.39 2.39
311 312 9.990360 TTAGACATTTCAACAAGTGACTACATA 57.010 29.630 0.00 0.00 35.39 2.29
312 313 8.902540 TTAGACATTTCAACAAGTGACTACAT 57.097 30.769 0.00 0.00 35.39 2.29
313 314 8.725405 TTTAGACATTTCAACAAGTGACTACA 57.275 30.769 0.00 0.00 35.39 2.74
314 315 9.997482 TTTTTAGACATTTCAACAAGTGACTAC 57.003 29.630 0.00 0.00 35.39 2.73
316 317 8.956426 TCTTTTTAGACATTTCAACAAGTGACT 58.044 29.630 0.00 0.00 35.39 3.41
317 318 9.010366 GTCTTTTTAGACATTTCAACAAGTGAC 57.990 33.333 0.00 0.00 38.59 3.67
318 319 8.956426 AGTCTTTTTAGACATTTCAACAAGTGA 58.044 29.630 7.92 0.00 41.02 3.41
319 320 9.573133 AAGTCTTTTTAGACATTTCAACAAGTG 57.427 29.630 7.92 0.00 41.02 3.16
336 337 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
337 338 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
338 339 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
339 340 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
340 341 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
341 342 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
342 343 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
343 344 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
344 345 7.300658 AGTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
345 346 6.856757 AGTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
346 347 5.713807 AGTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
347 348 5.134725 AGTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
348 349 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
349 350 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
350 351 3.463048 AAGTACTCCCTCCGTTCCTAA 57.537 47.619 0.00 0.00 0.00 2.69
351 352 3.463048 AAAGTACTCCCTCCGTTCCTA 57.537 47.619 0.00 0.00 0.00 2.94
352 353 2.322339 AAAGTACTCCCTCCGTTCCT 57.678 50.000 0.00 0.00 0.00 3.36
353 354 4.541973 TTAAAAGTACTCCCTCCGTTCC 57.458 45.455 0.00 0.00 0.00 3.62
354 355 6.866010 TTTTTAAAAGTACTCCCTCCGTTC 57.134 37.500 0.00 0.00 0.00 3.95
385 386 9.109393 GCCTGTCCTATTTTTCTTTTTCTTTTT 57.891 29.630 0.00 0.00 0.00 1.94
386 387 7.715249 GGCCTGTCCTATTTTTCTTTTTCTTTT 59.285 33.333 0.00 0.00 0.00 2.27
387 388 7.217200 GGCCTGTCCTATTTTTCTTTTTCTTT 58.783 34.615 0.00 0.00 0.00 2.52
388 389 6.239600 GGGCCTGTCCTATTTTTCTTTTTCTT 60.240 38.462 0.84 0.00 34.39 2.52
389 390 5.246203 GGGCCTGTCCTATTTTTCTTTTTCT 59.754 40.000 0.84 0.00 34.39 2.52
390 391 5.011635 TGGGCCTGTCCTATTTTTCTTTTTC 59.988 40.000 4.53 0.00 34.39 2.29
391 392 4.904853 TGGGCCTGTCCTATTTTTCTTTTT 59.095 37.500 4.53 0.00 34.39 1.94
392 393 4.488770 TGGGCCTGTCCTATTTTTCTTTT 58.511 39.130 4.53 0.00 34.39 2.27
393 394 4.126520 TGGGCCTGTCCTATTTTTCTTT 57.873 40.909 4.53 0.00 34.39 2.52
394 395 3.825908 TGGGCCTGTCCTATTTTTCTT 57.174 42.857 4.53 0.00 34.39 2.52
395 396 3.333680 TCTTGGGCCTGTCCTATTTTTCT 59.666 43.478 4.53 0.00 34.39 2.52
396 397 3.697166 TCTTGGGCCTGTCCTATTTTTC 58.303 45.455 4.53 0.00 34.39 2.29
403 404 1.229951 TCCATCTTGGGCCTGTCCT 60.230 57.895 4.53 0.00 38.32 3.85
434 435 1.951130 CCGATTCATCAGCCCGTCG 60.951 63.158 0.00 0.00 0.00 5.12
436 437 2.203070 GCCGATTCATCAGCCCGT 60.203 61.111 0.00 0.00 0.00 5.28
437 438 2.109799 AGCCGATTCATCAGCCCG 59.890 61.111 0.00 0.00 30.61 6.13
438 439 0.106708 TACAGCCGATTCATCAGCCC 59.893 55.000 0.00 0.00 30.61 5.19
439 440 2.175878 ATACAGCCGATTCATCAGCC 57.824 50.000 0.00 0.00 30.61 4.85
441 442 3.902150 ACGTATACAGCCGATTCATCAG 58.098 45.455 3.32 0.00 0.00 2.90
442 443 3.568430 AGACGTATACAGCCGATTCATCA 59.432 43.478 3.32 0.00 0.00 3.07
443 444 4.162096 AGACGTATACAGCCGATTCATC 57.838 45.455 3.32 0.00 0.00 2.92
444 445 4.378149 CGTAGACGTATACAGCCGATTCAT 60.378 45.833 19.46 0.00 34.11 2.57
445 446 3.059393 CGTAGACGTATACAGCCGATTCA 60.059 47.826 19.46 0.00 34.11 2.57
446 447 3.477122 CGTAGACGTATACAGCCGATTC 58.523 50.000 19.46 0.00 34.11 2.52
447 448 3.532892 CGTAGACGTATACAGCCGATT 57.467 47.619 19.46 0.00 34.11 3.34
467 477 5.030295 GCATGTGACACATATTTGCTGTAC 58.970 41.667 20.42 0.00 36.53 2.90
474 484 4.009675 ACCTTCGCATGTGACACATATTT 58.990 39.130 20.42 0.00 36.53 1.40
475 485 3.374988 CACCTTCGCATGTGACACATATT 59.625 43.478 20.42 0.00 36.53 1.28
483 493 1.195442 TACCCCACCTTCGCATGTGA 61.195 55.000 4.45 4.45 34.37 3.58
489 499 2.524611 AGGTATACCCCACCTTCGC 58.475 57.895 18.65 0.00 44.18 4.70
505 515 6.834168 AAAAACAGTATGGTCACCATAAGG 57.166 37.500 18.69 15.05 46.46 2.69
521 531 8.411318 ACCGTATAAAGACCGTATAAAAACAG 57.589 34.615 0.00 0.00 0.00 3.16
526 536 8.031864 TCACAAACCGTATAAAGACCGTATAAA 58.968 33.333 0.00 0.00 0.00 1.40
527 537 7.542890 TCACAAACCGTATAAAGACCGTATAA 58.457 34.615 0.00 0.00 0.00 0.98
528 538 7.094508 TCACAAACCGTATAAAGACCGTATA 57.905 36.000 0.00 0.00 0.00 1.47
529 539 5.964758 TCACAAACCGTATAAAGACCGTAT 58.035 37.500 0.00 0.00 0.00 3.06
530 540 5.384063 TCACAAACCGTATAAAGACCGTA 57.616 39.130 0.00 0.00 0.00 4.02
531 541 4.240096 CTCACAAACCGTATAAAGACCGT 58.760 43.478 0.00 0.00 0.00 4.83
532 542 3.615496 CCTCACAAACCGTATAAAGACCG 59.385 47.826 0.00 0.00 0.00 4.79
533 543 3.937079 CCCTCACAAACCGTATAAAGACC 59.063 47.826 0.00 0.00 0.00 3.85
534 544 3.937079 CCCCTCACAAACCGTATAAAGAC 59.063 47.826 0.00 0.00 0.00 3.01
535 545 3.583966 ACCCCTCACAAACCGTATAAAGA 59.416 43.478 0.00 0.00 0.00 2.52
536 546 3.687698 CACCCCTCACAAACCGTATAAAG 59.312 47.826 0.00 0.00 0.00 1.85
537 547 3.072768 ACACCCCTCACAAACCGTATAAA 59.927 43.478 0.00 0.00 0.00 1.40
561 571 3.541632 ACAAAGAAGAACCTTGCTTCGA 58.458 40.909 0.00 0.00 44.88 3.71
572 582 7.504924 AACGTCATTGGAATACAAAGAAGAA 57.495 32.000 3.57 0.00 43.46 2.52
610 620 7.552330 TGTATAAGCTCTTGTATGTTCAATGCA 59.448 33.333 0.00 0.00 33.01 3.96
611 621 7.919690 TGTATAAGCTCTTGTATGTTCAATGC 58.080 34.615 0.00 0.00 0.00 3.56
651 661 1.688735 CCGCCATCCTCTGTATTCTGA 59.311 52.381 0.00 0.00 0.00 3.27
652 662 1.270518 CCCGCCATCCTCTGTATTCTG 60.271 57.143 0.00 0.00 0.00 3.02
653 663 1.051812 CCCGCCATCCTCTGTATTCT 58.948 55.000 0.00 0.00 0.00 2.40
655 665 1.134098 CAACCCGCCATCCTCTGTATT 60.134 52.381 0.00 0.00 0.00 1.89
656 666 0.469917 CAACCCGCCATCCTCTGTAT 59.530 55.000 0.00 0.00 0.00 2.29
657 667 0.907704 ACAACCCGCCATCCTCTGTA 60.908 55.000 0.00 0.00 0.00 2.74
658 668 1.779061 AACAACCCGCCATCCTCTGT 61.779 55.000 0.00 0.00 0.00 3.41
659 669 1.002134 AACAACCCGCCATCCTCTG 60.002 57.895 0.00 0.00 0.00 3.35
660 670 1.002134 CAACAACCCGCCATCCTCT 60.002 57.895 0.00 0.00 0.00 3.69
661 671 0.035820 TACAACAACCCGCCATCCTC 60.036 55.000 0.00 0.00 0.00 3.71
662 672 0.623723 ATACAACAACCCGCCATCCT 59.376 50.000 0.00 0.00 0.00 3.24
668 678 5.610235 TGTTTACTAATACAACAACCCGC 57.390 39.130 0.00 0.00 0.00 6.13
695 705 4.584325 AGATGAGATCAGGAGTAGTTGAGC 59.416 45.833 0.00 0.00 0.00 4.26
722 732 0.179034 GGGACTAATGAGCCCTGCTG 60.179 60.000 0.00 0.00 39.88 4.41
845 856 9.429359 TGTGGGCAATAATGTAGTTTTAAAATG 57.571 29.630 3.52 0.00 0.00 2.32
894 911 6.152379 CCTTCCAAGTCTTCAAGTTTAATGC 58.848 40.000 0.00 0.00 0.00 3.56
948 965 2.158623 TGTCACTGCTCTGATTGGGTTT 60.159 45.455 0.00 0.00 0.00 3.27
965 982 2.897271 AGAGGAAGAGAGAGCTGTCA 57.103 50.000 14.08 0.00 0.00 3.58
966 983 3.356290 AGAAGAGGAAGAGAGAGCTGTC 58.644 50.000 1.81 1.81 0.00 3.51
975 992 3.445450 TCACAATCGGAGAAGAGGAAGAG 59.555 47.826 0.00 0.00 43.58 2.85
981 1003 3.118992 TCATGGTCACAATCGGAGAAGAG 60.119 47.826 0.00 0.00 43.58 2.85
1035 1057 2.125106 GGCTGGAAGTGGTAGGCG 60.125 66.667 0.00 0.00 35.30 5.52
1105 1127 9.459640 CAAAATCATGTGGATTGATCAGATAAC 57.540 33.333 0.00 0.00 45.46 1.89
1150 1173 1.611491 GCAGACGGGGATCAACAAAAA 59.389 47.619 0.00 0.00 0.00 1.94
1164 1187 1.328680 CAAATTCAGGGATCGCAGACG 59.671 52.381 12.83 0.00 42.51 4.18
1171 1194 3.561725 GTGATCGTCCAAATTCAGGGATC 59.438 47.826 8.17 8.17 35.25 3.36
1204 1227 2.749621 GGGTCTGCAAGTTTTCATCGAT 59.250 45.455 0.00 0.00 33.76 3.59
1223 1246 2.218603 GATTAGCACGTACCATTGGGG 58.781 52.381 7.78 0.00 44.81 4.96
1244 1322 3.568430 GCACTAACCAAGTTTAAGTGGCT 59.432 43.478 10.72 0.00 38.58 4.75
1247 1325 6.371809 TCTTGCACTAACCAAGTTTAAGTG 57.628 37.500 6.17 6.17 40.35 3.16
1252 1330 8.177119 TCATTAATCTTGCACTAACCAAGTTT 57.823 30.769 0.00 0.00 40.35 2.66
1254 1332 7.944729 ATCATTAATCTTGCACTAACCAAGT 57.055 32.000 0.00 0.00 40.35 3.16
1261 1339 8.650490 TCATGGTCTATCATTAATCTTGCACTA 58.350 33.333 0.00 0.00 0.00 2.74
1262 1340 7.512130 TCATGGTCTATCATTAATCTTGCACT 58.488 34.615 0.00 0.00 0.00 4.40
1263 1341 7.572724 GCTCATGGTCTATCATTAATCTTGCAC 60.573 40.741 0.00 0.00 0.00 4.57
1264 1342 6.429078 GCTCATGGTCTATCATTAATCTTGCA 59.571 38.462 0.00 0.00 0.00 4.08
1265 1343 6.654161 AGCTCATGGTCTATCATTAATCTTGC 59.346 38.462 0.00 0.00 0.00 4.01
1266 1344 9.368674 CTAGCTCATGGTCTATCATTAATCTTG 57.631 37.037 0.00 0.00 0.00 3.02
1267 1345 9.099071 ACTAGCTCATGGTCTATCATTAATCTT 57.901 33.333 0.00 0.00 0.00 2.40
1268 1346 8.663209 ACTAGCTCATGGTCTATCATTAATCT 57.337 34.615 0.00 0.00 0.00 2.40
1271 1349 9.588096 TCTAACTAGCTCATGGTCTATCATTAA 57.412 33.333 0.00 0.00 0.00 1.40
1272 1350 9.237187 CTCTAACTAGCTCATGGTCTATCATTA 57.763 37.037 0.00 0.00 0.00 1.90
1273 1351 7.728083 ACTCTAACTAGCTCATGGTCTATCATT 59.272 37.037 0.00 0.00 0.00 2.57
1274 1352 7.176515 CACTCTAACTAGCTCATGGTCTATCAT 59.823 40.741 0.00 0.00 0.00 2.45
1275 1353 6.488344 CACTCTAACTAGCTCATGGTCTATCA 59.512 42.308 0.00 0.00 0.00 2.15
1276 1354 6.712998 TCACTCTAACTAGCTCATGGTCTATC 59.287 42.308 0.00 0.00 0.00 2.08
1277 1355 6.488683 GTCACTCTAACTAGCTCATGGTCTAT 59.511 42.308 0.00 0.00 0.00 1.98
1278 1356 5.823570 GTCACTCTAACTAGCTCATGGTCTA 59.176 44.000 0.00 0.00 0.00 2.59
1279 1357 4.642885 GTCACTCTAACTAGCTCATGGTCT 59.357 45.833 0.00 0.00 0.00 3.85
1280 1358 4.399618 TGTCACTCTAACTAGCTCATGGTC 59.600 45.833 0.00 0.00 0.00 4.02
1281 1359 4.344978 TGTCACTCTAACTAGCTCATGGT 58.655 43.478 0.00 0.00 0.00 3.55
1282 1360 4.400884 ACTGTCACTCTAACTAGCTCATGG 59.599 45.833 0.00 0.00 0.00 3.66
1283 1361 5.574891 ACTGTCACTCTAACTAGCTCATG 57.425 43.478 0.00 0.00 0.00 3.07
1284 1362 6.887545 AGTAACTGTCACTCTAACTAGCTCAT 59.112 38.462 0.00 0.00 0.00 2.90
1285 1363 6.239396 AGTAACTGTCACTCTAACTAGCTCA 58.761 40.000 0.00 0.00 0.00 4.26
1286 1364 6.746745 AGTAACTGTCACTCTAACTAGCTC 57.253 41.667 0.00 0.00 0.00 4.09
1287 1365 7.309316 GGAAAGTAACTGTCACTCTAACTAGCT 60.309 40.741 0.00 0.00 0.00 3.32
1288 1366 6.807720 GGAAAGTAACTGTCACTCTAACTAGC 59.192 42.308 0.00 0.00 0.00 3.42
1289 1367 7.022384 CGGAAAGTAACTGTCACTCTAACTAG 58.978 42.308 0.00 0.00 0.00 2.57
1290 1368 6.488006 ACGGAAAGTAACTGTCACTCTAACTA 59.512 38.462 0.00 0.00 0.00 2.24
1291 1369 5.301298 ACGGAAAGTAACTGTCACTCTAACT 59.699 40.000 0.00 0.00 0.00 2.24
1292 1370 5.527033 ACGGAAAGTAACTGTCACTCTAAC 58.473 41.667 0.00 0.00 0.00 2.34
1293 1371 5.779529 ACGGAAAGTAACTGTCACTCTAA 57.220 39.130 0.00 0.00 0.00 2.10
1294 1372 5.526115 CAACGGAAAGTAACTGTCACTCTA 58.474 41.667 0.00 0.00 0.00 2.43
1318 1396 1.673993 TACATTGGGCCTGCACGTG 60.674 57.895 12.28 12.28 0.00 4.49
1328 1406 0.891449 TGCCGTTGTGGTACATTGGG 60.891 55.000 0.00 0.00 44.52 4.12
2304 2400 4.363990 CGTCGCCCACTGCAGACT 62.364 66.667 23.35 0.00 39.63 3.24
2417 2513 3.358076 CTTCGGGTCCAGCGTCTCC 62.358 68.421 0.00 0.00 0.00 3.71
2612 2708 4.740695 GCAGATGTCAAGGATACGTACTTC 59.259 45.833 0.00 0.00 46.39 3.01
2642 2742 7.721286 TTCACAAACTGTCATGTTTTGTTTT 57.279 28.000 11.93 0.00 37.98 2.43
2643 2743 7.818930 AGATTCACAAACTGTCATGTTTTGTTT 59.181 29.630 11.93 8.15 37.98 2.83
2644 2744 7.322664 AGATTCACAAACTGTCATGTTTTGTT 58.677 30.769 11.93 3.69 37.98 2.83
2645 2745 6.866480 AGATTCACAAACTGTCATGTTTTGT 58.134 32.000 9.94 9.94 37.98 2.83
2646 2746 9.121517 GATAGATTCACAAACTGTCATGTTTTG 57.878 33.333 0.00 1.91 37.98 2.44
2673 2777 9.912634 CAGAAATTTACATGCCTTTTCTTTCTA 57.087 29.630 9.52 0.00 35.14 2.10
2674 2778 8.641541 TCAGAAATTTACATGCCTTTTCTTTCT 58.358 29.630 9.52 5.54 35.14 2.52
2700 2804 5.426504 TGTCCATGTTTGCAAAAAGATGTT 58.573 33.333 14.67 0.00 33.18 2.71
2732 2881 0.741326 TGCTCTCGTAGATGACCTGC 59.259 55.000 0.00 0.00 33.89 4.85
2747 2896 3.024547 GGGATTTTTACCCCTTCTGCTC 58.975 50.000 0.00 0.00 41.38 4.26
2871 3021 1.154301 GTTTGTGTGCGTATGCCCG 60.154 57.895 4.05 0.00 41.78 6.13
2894 3044 1.855295 TATCGGTCTGCTTGGTACCA 58.145 50.000 11.60 11.60 32.55 3.25
2895 3045 2.364324 TGATATCGGTCTGCTTGGTACC 59.636 50.000 4.43 4.43 0.00 3.34
2896 3046 3.728076 TGATATCGGTCTGCTTGGTAC 57.272 47.619 0.00 0.00 0.00 3.34
2907 3057 3.128349 GGCGTGTGTTAATGATATCGGT 58.872 45.455 0.00 0.00 0.00 4.69
2935 3260 1.402852 CCGTGTGATCGATCTGTGTGT 60.403 52.381 25.02 0.00 0.00 3.72
2936 3261 1.271876 CCGTGTGATCGATCTGTGTG 58.728 55.000 25.02 11.53 0.00 3.82
3212 3537 9.001542 CCAACATGTTTCCAATTGTTTCATTAT 57.998 29.630 8.77 0.00 30.23 1.28
3255 3580 8.867097 TCCTACGCTCCATTTACTAAATTCTAT 58.133 33.333 0.00 0.00 0.00 1.98
3256 3581 8.241497 TCCTACGCTCCATTTACTAAATTCTA 57.759 34.615 0.00 0.00 0.00 2.10
3267 3592 4.273480 CGAATCAAATCCTACGCTCCATTT 59.727 41.667 0.00 0.00 0.00 2.32
3271 3596 3.053455 CTCGAATCAAATCCTACGCTCC 58.947 50.000 0.00 0.00 0.00 4.70
3272 3597 2.473235 GCTCGAATCAAATCCTACGCTC 59.527 50.000 0.00 0.00 0.00 5.03
3274 3599 2.201732 TGCTCGAATCAAATCCTACGC 58.798 47.619 0.00 0.00 0.00 4.42
3285 3610 2.719046 CACAAAACCGTTTGCTCGAATC 59.281 45.455 0.00 0.00 46.84 2.52
3286 3611 2.098443 ACACAAAACCGTTTGCTCGAAT 59.902 40.909 0.00 0.00 46.84 3.34
3287 3612 1.469308 ACACAAAACCGTTTGCTCGAA 59.531 42.857 0.00 0.00 46.84 3.71
3288 3613 1.088306 ACACAAAACCGTTTGCTCGA 58.912 45.000 0.00 0.00 46.84 4.04
3289 3614 1.581602 CAACACAAAACCGTTTGCTCG 59.418 47.619 0.00 0.00 46.84 5.03
3290 3615 2.601804 ACAACACAAAACCGTTTGCTC 58.398 42.857 0.00 0.00 46.84 4.26
3291 3616 2.734276 ACAACACAAAACCGTTTGCT 57.266 40.000 0.00 0.00 46.84 3.91
3292 3617 4.106197 TGATACAACACAAAACCGTTTGC 58.894 39.130 0.00 0.00 46.84 3.68
3294 3619 5.746245 CACATGATACAACACAAAACCGTTT 59.254 36.000 0.00 0.00 0.00 3.60
3295 3620 5.163602 ACACATGATACAACACAAAACCGTT 60.164 36.000 0.00 0.00 0.00 4.44
3296 3621 4.336993 ACACATGATACAACACAAAACCGT 59.663 37.500 0.00 0.00 0.00 4.83
3334 3659 7.484641 GCGATAGAAACAATGCATCTAAAACAA 59.515 33.333 0.00 0.00 39.76 2.83
3336 3661 6.966632 TGCGATAGAAACAATGCATCTAAAAC 59.033 34.615 0.00 0.00 39.76 2.43
3375 3701 1.729149 GCTGTAGCGGCACAAACAATC 60.729 52.381 1.45 0.00 35.55 2.67
3383 3709 1.814169 GTAAGGGCTGTAGCGGCAC 60.814 63.158 1.45 0.00 43.26 5.01
3385 3711 1.521681 CAGTAAGGGCTGTAGCGGC 60.522 63.158 0.00 0.00 43.26 6.53
3388 3714 1.002087 ACACACAGTAAGGGCTGTAGC 59.998 52.381 0.00 0.00 46.81 3.58
3393 3719 4.021368 CACTAGTTACACACAGTAAGGGCT 60.021 45.833 0.00 0.00 43.06 5.19
3403 3729 2.537401 GATCCGCCACTAGTTACACAC 58.463 52.381 0.00 0.00 0.00 3.82
3407 3733 1.068741 CCTGGATCCGCCACTAGTTAC 59.931 57.143 7.39 0.00 43.33 2.50
3412 3738 1.140852 CAATTCCTGGATCCGCCACTA 59.859 52.381 7.39 0.00 43.33 2.74
3419 3745 4.766375 TCGTTACTTCAATTCCTGGATCC 58.234 43.478 4.20 4.20 0.00 3.36
3457 3783 9.922305 GTTGATTAGACTTGCATTTGTATCTAC 57.078 33.333 0.00 0.00 0.00 2.59
3530 3857 7.437862 GTCAATAGAGACCTTCTTATGCTTCAG 59.562 40.741 0.00 0.00 37.36 3.02
3635 3963 7.549839 AGTTTATGGTCAAAGTACATAGCGTA 58.450 34.615 0.00 0.00 0.00 4.42
3639 3967 8.665685 GTGGAAGTTTATGGTCAAAGTACATAG 58.334 37.037 0.00 0.00 0.00 2.23
3641 3969 6.433093 GGTGGAAGTTTATGGTCAAAGTACAT 59.567 38.462 0.00 0.00 0.00 2.29
3642 3970 5.766174 GGTGGAAGTTTATGGTCAAAGTACA 59.234 40.000 0.00 0.00 0.00 2.90
3644 3972 5.942961 TGGTGGAAGTTTATGGTCAAAGTA 58.057 37.500 0.00 0.00 0.00 2.24
3646 3974 5.772521 CTTGGTGGAAGTTTATGGTCAAAG 58.227 41.667 0.00 0.00 0.00 2.77
3647 3975 4.038642 GCTTGGTGGAAGTTTATGGTCAAA 59.961 41.667 0.00 0.00 33.73 2.69
3649 3977 3.153919 GCTTGGTGGAAGTTTATGGTCA 58.846 45.455 0.00 0.00 33.73 4.02
3650 3978 2.492088 GGCTTGGTGGAAGTTTATGGTC 59.508 50.000 0.00 0.00 33.73 4.02
3652 3980 2.493278 CTGGCTTGGTGGAAGTTTATGG 59.507 50.000 0.00 0.00 33.73 2.74
3653 3981 3.420893 TCTGGCTTGGTGGAAGTTTATG 58.579 45.455 0.00 0.00 33.73 1.90
3654 3982 3.806949 TCTGGCTTGGTGGAAGTTTAT 57.193 42.857 0.00 0.00 33.73 1.40
3655 3983 3.219281 GTTCTGGCTTGGTGGAAGTTTA 58.781 45.455 0.00 0.00 33.73 2.01
3658 3986 0.550914 TGTTCTGGCTTGGTGGAAGT 59.449 50.000 0.00 0.00 33.73 3.01
3659 3987 1.815003 GATGTTCTGGCTTGGTGGAAG 59.185 52.381 0.00 0.00 34.41 3.46
3672 5483 1.673767 ACACCCATCCAGGATGTTCT 58.326 50.000 25.35 6.79 41.22 3.01
3681 5492 2.862541 CACTTGAAGAACACCCATCCA 58.137 47.619 0.00 0.00 0.00 3.41
3682 5493 1.541588 GCACTTGAAGAACACCCATCC 59.458 52.381 0.00 0.00 0.00 3.51
3712 5523 6.469410 TCGAATCAAAACAAGTACATACCCT 58.531 36.000 0.00 0.00 0.00 4.34
3725 5536 6.114221 TCCGGTGAATAATCGAATCAAAAC 57.886 37.500 0.00 0.00 0.00 2.43
3749 5560 3.849953 GTCCGACATTGCGCCGAC 61.850 66.667 4.18 0.00 0.00 4.79
3773 5584 2.869801 TCCTACACACTTGAGCAAAACG 59.130 45.455 0.00 0.00 0.00 3.60
3779 5590 7.119846 ACTCAAATTTATCCTACACACTTGAGC 59.880 37.037 7.67 0.00 40.42 4.26
3780 5591 8.553459 ACTCAAATTTATCCTACACACTTGAG 57.447 34.615 6.47 6.47 41.78 3.02
3781 5592 8.918202 AACTCAAATTTATCCTACACACTTGA 57.082 30.769 0.00 0.00 0.00 3.02
3782 5593 9.965824 AAAACTCAAATTTATCCTACACACTTG 57.034 29.630 0.00 0.00 0.00 3.16
3801 5615 2.048601 TCTTCCCGGTACCAAAACTCA 58.951 47.619 13.54 0.00 0.00 3.41
3802 5616 2.845363 TCTTCCCGGTACCAAAACTC 57.155 50.000 13.54 0.00 0.00 3.01
3805 5619 4.376225 AATCTTCTTCCCGGTACCAAAA 57.624 40.909 13.54 1.57 0.00 2.44
3813 5627 3.728076 TCGATGTAATCTTCTTCCCGG 57.272 47.619 0.00 0.00 42.58 5.73
3814 5628 4.871513 TGATCGATGTAATCTTCTTCCCG 58.128 43.478 0.54 0.00 42.58 5.14
3840 5654 7.433425 CGAGCATCTATCGAATTTCATGCTATA 59.567 37.037 16.63 0.00 45.39 1.31
3873 5687 6.247727 TCTCTAGCATCTATTCTAGCAACG 57.752 41.667 0.00 0.00 33.94 4.10
3876 5690 7.336679 GTCTCATCTCTAGCATCTATTCTAGCA 59.663 40.741 0.00 0.00 33.94 3.49
3877 5691 7.554118 AGTCTCATCTCTAGCATCTATTCTAGC 59.446 40.741 0.00 0.00 33.94 3.42
3883 5697 7.500227 GCATCTAGTCTCATCTCTAGCATCTAT 59.500 40.741 0.00 0.00 35.13 1.98
3888 5702 3.750652 CGCATCTAGTCTCATCTCTAGCA 59.249 47.826 0.00 0.00 35.13 3.49
3928 5743 4.560128 TCCACACTTCTTCTTCGATTCTG 58.440 43.478 0.00 0.00 0.00 3.02
3929 5744 4.873746 TCCACACTTCTTCTTCGATTCT 57.126 40.909 0.00 0.00 0.00 2.40
3935 5750 2.734079 CGAGCTTCCACACTTCTTCTTC 59.266 50.000 0.00 0.00 0.00 2.87
3961 5780 6.441093 TCATTGTTGATTCTCTGTATTGGC 57.559 37.500 0.00 0.00 0.00 4.52
3968 5787 8.713737 TCTATGTCTTCATTGTTGATTCTCTG 57.286 34.615 0.00 0.00 35.70 3.35
4012 5831 4.701651 CCAACTTTCATAATGGCTCTCACA 59.298 41.667 0.00 0.00 0.00 3.58
4013 5832 4.943705 TCCAACTTTCATAATGGCTCTCAC 59.056 41.667 0.00 0.00 32.87 3.51
4016 5835 7.486407 AAAATCCAACTTTCATAATGGCTCT 57.514 32.000 0.00 0.00 32.87 4.09
4057 5877 8.028540 ACAAAATCAAAGAAAACAAGAACCAC 57.971 30.769 0.00 0.00 0.00 4.16
4067 5887 7.971168 TCGCTACAAGAACAAAATCAAAGAAAA 59.029 29.630 0.00 0.00 0.00 2.29
4078 5898 6.612247 TCAATTCTTCGCTACAAGAACAAA 57.388 33.333 4.92 0.00 43.57 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.