Multiple sequence alignment - TraesCS2A01G486200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G486200 chr2A 100.000 7962 0 0 1 7962 721570082 721562121 0.000000e+00 14704.0
1 TraesCS2A01G486200 chr2A 80.196 1227 227 11 1095 2311 721591758 721590538 0.000000e+00 905.0
2 TraesCS2A01G486200 chr2A 100.000 414 0 0 8250 8663 721561833 721561420 0.000000e+00 765.0
3 TraesCS2A01G486200 chr2A 74.088 1069 203 45 6116 7155 721589691 721588668 1.060000e-98 372.0
4 TraesCS2A01G486200 chr2A 87.307 323 38 3 8342 8662 755077529 755077208 4.940000e-97 366.0
5 TraesCS2A01G486200 chr2A 78.088 502 76 18 4549 5028 102109561 102110050 3.960000e-73 287.0
6 TraesCS2A01G486200 chr2A 74.377 722 143 29 6440 7155 749866171 749866856 3.990000e-68 270.0
7 TraesCS2A01G486200 chr2A 79.321 324 55 10 7291 7605 721588526 721588206 5.270000e-52 217.0
8 TraesCS2A01G486200 chr2A 75.806 186 34 8 3673 3847 778247756 778247941 5.570000e-12 84.2
9 TraesCS2A01G486200 chr2D 94.771 4437 130 35 2831 7212 586782322 586777933 0.000000e+00 6815.0
10 TraesCS2A01G486200 chr2D 96.451 2761 86 9 59 2812 586785159 586782404 0.000000e+00 4545.0
11 TraesCS2A01G486200 chr2D 83.832 1336 187 17 984 2312 618883735 618885048 0.000000e+00 1243.0
12 TraesCS2A01G486200 chr2D 90.027 732 48 4 7222 7935 586777957 586777233 0.000000e+00 924.0
13 TraesCS2A01G486200 chr2D 83.226 155 23 3 7418 7569 618879392 618879546 1.170000e-28 139.0
14 TraesCS2A01G486200 chr2D 93.506 77 5 0 7856 7932 586577232 586577156 1.980000e-21 115.0
15 TraesCS2A01G486200 chr2D 97.727 44 1 0 10 53 586785229 586785186 9.330000e-10 76.8
16 TraesCS2A01G486200 chr2B 93.048 2546 128 31 272 2799 708203322 708200808 0.000000e+00 3675.0
17 TraesCS2A01G486200 chr2B 89.095 2531 154 52 5440 7894 708200506 708198022 0.000000e+00 3033.0
18 TraesCS2A01G486200 chr2B 84.978 1338 191 8 982 2312 756314280 756312946 0.000000e+00 1349.0
19 TraesCS2A01G486200 chr2B 84.978 1338 191 8 982 2312 756329115 756327781 0.000000e+00 1349.0
20 TraesCS2A01G486200 chr2B 84.615 1339 194 9 982 2312 756343417 756342083 0.000000e+00 1321.0
21 TraesCS2A01G486200 chr2B 80.294 1223 230 11 1095 2313 708211300 708210085 0.000000e+00 913.0
22 TraesCS2A01G486200 chr2B 87.771 646 47 7 7315 7935 708191413 708190775 0.000000e+00 726.0
23 TraesCS2A01G486200 chr2B 81.283 935 107 27 3304 4209 278860204 278861099 0.000000e+00 695.0
24 TraesCS2A01G486200 chr2B 80.831 939 101 33 3301 4209 133683256 133684145 0.000000e+00 664.0
25 TraesCS2A01G486200 chr2B 81.557 732 87 18 4250 4954 133684151 133684861 2.110000e-155 560.0
26 TraesCS2A01G486200 chr2B 85.749 414 54 5 8250 8662 785213410 785213819 4.800000e-117 433.0
27 TraesCS2A01G486200 chr2B 74.596 1114 219 47 6053 7155 708209320 708208260 1.730000e-116 431.0
28 TraesCS2A01G486200 chr2B 91.266 229 20 0 5159 5387 133685392 133685620 6.530000e-81 313.0
29 TraesCS2A01G486200 chr2B 91.266 229 20 0 5159 5387 278862294 278862522 6.530000e-81 313.0
30 TraesCS2A01G486200 chr2B 83.813 278 35 6 2946 3213 133682874 133683151 1.120000e-63 255.0
31 TraesCS2A01G486200 chr2B 84.553 246 32 5 7366 7605 708207840 708207595 1.120000e-58 239.0
32 TraesCS2A01G486200 chr2B 93.043 115 8 0 131 245 708203434 708203320 1.500000e-37 169.0
33 TraesCS2A01G486200 chr2B 97.059 34 1 0 5311 5344 133685617 133685650 3.380000e-04 58.4
34 TraesCS2A01G486200 chr6A 79.059 1275 154 60 4212 5421 579983802 579985028 0.000000e+00 771.0
35 TraesCS2A01G486200 chr6A 83.976 337 54 0 8324 8660 137971703 137971367 3.020000e-84 324.0
36 TraesCS2A01G486200 chr7B 81.711 935 108 27 3304 4209 20399032 20399932 0.000000e+00 721.0
37 TraesCS2A01G486200 chr7B 81.232 698 90 19 4250 4920 20399938 20400621 7.700000e-145 525.0
38 TraesCS2A01G486200 chr7B 73.671 395 70 22 4431 4805 530458085 530458465 1.180000e-23 122.0
39 TraesCS2A01G486200 chr7B 100.000 34 0 0 5311 5344 20401103 20401136 7.260000e-06 63.9
40 TraesCS2A01G486200 chr6B 80.876 936 104 33 3304 4209 516481761 516480871 0.000000e+00 667.0
41 TraesCS2A01G486200 chr6B 81.557 732 87 18 4250 4954 516480865 516480155 2.110000e-155 560.0
42 TraesCS2A01G486200 chr6B 79.223 669 95 22 4548 5185 89526107 89526762 8.040000e-115 425.0
43 TraesCS2A01G486200 chr6B 91.266 229 20 0 5159 5387 516480065 516479837 6.530000e-81 313.0
44 TraesCS2A01G486200 chr6B 84.672 274 32 6 2950 3213 516482145 516481872 1.850000e-66 265.0
45 TraesCS2A01G486200 chr6B 100.000 34 0 0 5311 5344 516479840 516479807 7.260000e-06 63.9
46 TraesCS2A01G486200 chr7D 86.957 414 48 4 8254 8662 34067815 34068227 2.200000e-125 460.0
47 TraesCS2A01G486200 chr5B 85.888 411 54 4 8254 8662 148998883 148998475 1.340000e-117 435.0
48 TraesCS2A01G486200 chr5B 79.192 668 95 21 4549 5185 465817886 465817232 2.890000e-114 424.0
49 TraesCS2A01G486200 chr5B 81.858 452 55 15 4319 4751 603759501 603759944 1.070000e-93 355.0
50 TraesCS2A01G486200 chr7A 86.895 351 41 3 8315 8660 94305111 94305461 1.050000e-103 388.0
51 TraesCS2A01G486200 chr7A 83.210 405 56 8 2950 3353 625063091 625062698 2.300000e-95 361.0
52 TraesCS2A01G486200 chr7A 81.215 362 50 12 3531 3889 625062563 625062217 8.570000e-70 276.0
53 TraesCS2A01G486200 chr4A 86.589 343 43 1 8318 8660 133049485 133049146 8.210000e-100 375.0
54 TraesCS2A01G486200 chr4A 79.867 452 61 17 4761 5193 710643715 710643275 3.930000e-78 303.0
55 TraesCS2A01G486200 chr5A 78.110 635 91 24 4549 5150 613094424 613093805 8.270000e-95 359.0
56 TraesCS2A01G486200 chr5A 83.008 359 39 9 8254 8592 26933996 26933640 1.090000e-78 305.0
57 TraesCS2A01G486200 chr5A 78.571 504 73 19 4549 5030 658547362 658546872 5.080000e-77 300.0
58 TraesCS2A01G486200 chr5A 74.890 227 44 9 3673 3886 660208099 660207873 3.330000e-14 91.6
59 TraesCS2A01G486200 chr4D 86.943 314 40 1 8345 8657 444253894 444253581 1.380000e-92 351.0
60 TraesCS2A01G486200 chr3D 87.213 305 38 1 8359 8662 36575539 36575843 6.440000e-91 346.0
61 TraesCS2A01G486200 chr6D 80.000 450 67 10 4761 5193 360519188 360519631 2.350000e-80 311.0
62 TraesCS2A01G486200 chr6D 80.723 415 59 11 4304 4698 360518745 360519158 3.930000e-78 303.0
63 TraesCS2A01G486200 chr3A 86.957 184 22 2 8251 8433 153600538 153600720 1.140000e-48 206.0
64 TraesCS2A01G486200 chr3B 73.127 614 104 36 4237 4805 157725606 157726203 6.960000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G486200 chr2A 721561420 721570082 8662 True 7734.500000 14704 100.000000 1 8663 2 chr2A.!!$R2 8662
1 TraesCS2A01G486200 chr2A 721588206 721591758 3552 True 498.000000 905 77.868333 1095 7605 3 chr2A.!!$R3 6510
2 TraesCS2A01G486200 chr2A 749866171 749866856 685 False 270.000000 270 74.377000 6440 7155 1 chr2A.!!$F2 715
3 TraesCS2A01G486200 chr2D 586777233 586785229 7996 True 3090.200000 6815 94.744000 10 7935 4 chr2D.!!$R2 7925
4 TraesCS2A01G486200 chr2D 618883735 618885048 1313 False 1243.000000 1243 83.832000 984 2312 1 chr2D.!!$F2 1328
5 TraesCS2A01G486200 chr2B 708198022 708203434 5412 True 2292.333333 3675 91.728667 131 7894 3 chr2B.!!$R5 7763
6 TraesCS2A01G486200 chr2B 756312946 756314280 1334 True 1349.000000 1349 84.978000 982 2312 1 chr2B.!!$R2 1330
7 TraesCS2A01G486200 chr2B 756327781 756329115 1334 True 1349.000000 1349 84.978000 982 2312 1 chr2B.!!$R3 1330
8 TraesCS2A01G486200 chr2B 756342083 756343417 1334 True 1321.000000 1321 84.615000 982 2312 1 chr2B.!!$R4 1330
9 TraesCS2A01G486200 chr2B 708190775 708191413 638 True 726.000000 726 87.771000 7315 7935 1 chr2B.!!$R1 620
10 TraesCS2A01G486200 chr2B 708207595 708211300 3705 True 527.666667 913 79.814333 1095 7605 3 chr2B.!!$R6 6510
11 TraesCS2A01G486200 chr2B 278860204 278862522 2318 False 504.000000 695 86.274500 3304 5387 2 chr2B.!!$F3 2083
12 TraesCS2A01G486200 chr2B 133682874 133685650 2776 False 370.080000 664 86.905200 2946 5387 5 chr2B.!!$F2 2441
13 TraesCS2A01G486200 chr6A 579983802 579985028 1226 False 771.000000 771 79.059000 4212 5421 1 chr6A.!!$F1 1209
14 TraesCS2A01G486200 chr7B 20399032 20401136 2104 False 436.633333 721 87.647667 3304 5344 3 chr7B.!!$F2 2040
15 TraesCS2A01G486200 chr6B 89526107 89526762 655 False 425.000000 425 79.223000 4548 5185 1 chr6B.!!$F1 637
16 TraesCS2A01G486200 chr6B 516479807 516482145 2338 True 373.780000 667 87.674200 2950 5387 5 chr6B.!!$R1 2437
17 TraesCS2A01G486200 chr5B 465817232 465817886 654 True 424.000000 424 79.192000 4549 5185 1 chr5B.!!$R2 636
18 TraesCS2A01G486200 chr7A 625062217 625063091 874 True 318.500000 361 82.212500 2950 3889 2 chr7A.!!$R1 939
19 TraesCS2A01G486200 chr5A 613093805 613094424 619 True 359.000000 359 78.110000 4549 5150 1 chr5A.!!$R2 601
20 TraesCS2A01G486200 chr6D 360518745 360519631 886 False 307.000000 311 80.361500 4304 5193 2 chr6D.!!$F1 889

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
472 498 0.179108 GATGAAGCGAGCGGTACCTT 60.179 55.000 10.90 0.00 0.00 3.50 F
1112 1145 0.532573 TCTGACATCCTCGACAAGGC 59.467 55.000 0.00 0.00 45.78 4.35 F
2809 2865 1.070134 ACAGACCTAAAGAACTGCGCA 59.930 47.619 10.98 10.98 34.25 6.09 F
3297 3458 0.033781 GCACTCCTTGGCAATGCAAA 59.966 50.000 16.39 0.00 36.30 3.68 F
3432 3648 0.033796 CCATGGTTGCTCCTGGACAT 60.034 55.000 2.57 0.00 36.96 3.06 F
3439 3660 1.225704 GCTCCTGGACATTGGGAGG 59.774 63.158 9.78 1.45 44.76 4.30 F
5005 5825 1.484240 AGCCTGAGATGTTCTGGTAGC 59.516 52.381 2.70 0.00 44.48 3.58 F
6096 7120 0.033504 GACGTCCTTTCCTGCAGTCA 59.966 55.000 13.81 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1291 1324 2.025887 GGTTTCCCCTGTCACTGATCAT 60.026 50.000 0.0 0.0 0.00 2.45 R
2963 3105 1.237954 TAATTTCCCGCAGCAACGCA 61.238 50.000 0.0 0.0 0.00 5.24 R
4381 4683 1.141053 AGAAGCGTGAAGTGTTTCCCT 59.859 47.619 0.0 0.0 32.09 4.20 R
5005 5825 0.894835 ACCTTTTATTTGCGGGGCAG 59.105 50.000 0.0 0.0 40.61 4.85 R
5091 5920 6.835488 CCTCTCAATTCCCCATAAATTTCTCA 59.165 38.462 0.0 0.0 0.00 3.27 R
5446 6437 9.589461 TTGTCACCCCTAAAATGAAAGTTATAA 57.411 29.630 0.0 0.0 0.00 0.98 R
6743 7789 0.681243 GAAGCCATTCCAGACCCACC 60.681 60.000 0.0 0.0 0.00 4.61 R
7936 9264 0.031616 GAGGGGGAGGAGTGTGATCT 60.032 60.000 0.0 0.0 0.00 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 9.606631 AGCATTATTGGTTTGAACTGTTTAAAA 57.393 25.926 11.41 5.39 0.00 1.52
85 107 3.129502 GATGCCAGCGCTGCTCAA 61.130 61.111 31.96 16.13 36.40 3.02
89 111 4.112341 CCAGCGCTGCTCAAAGGC 62.112 66.667 31.96 0.00 36.40 4.35
114 136 1.006998 TGCCCAGCCAGTTTTATCCAT 59.993 47.619 0.00 0.00 0.00 3.41
122 144 3.429410 GCCAGTTTTATCCATGGAGTTGC 60.429 47.826 21.33 9.82 34.60 4.17
129 151 2.507407 TCCATGGAGTTGCCTAAACC 57.493 50.000 11.44 0.00 39.85 3.27
141 163 5.071653 AGTTGCCTAAACCAAACCAATGAAT 59.928 36.000 0.00 0.00 39.85 2.57
162 184 2.820178 TGGTCAACAGGCTAGATCTGA 58.180 47.619 16.97 0.00 36.22 3.27
165 187 4.225942 TGGTCAACAGGCTAGATCTGAAAT 59.774 41.667 16.97 4.04 36.22 2.17
166 188 4.574013 GGTCAACAGGCTAGATCTGAAATG 59.426 45.833 16.97 12.81 36.22 2.32
169 191 4.414337 ACAGGCTAGATCTGAAATGTCC 57.586 45.455 16.97 0.00 36.22 4.02
236 261 6.401581 GCATCTAAAGTGCTGTTCTCTGTAAC 60.402 42.308 0.00 0.00 39.45 2.50
245 270 2.190981 GTTCTCTGTAACCGGTATGCG 58.809 52.381 8.00 0.00 0.00 4.73
315 340 1.448922 GAGGAGACCCGATCAGGACG 61.449 65.000 0.76 0.00 45.00 4.79
367 392 7.497909 AGTTGGTGTACCGATATTTTTATCTGG 59.502 37.037 0.00 0.00 39.43 3.86
394 419 2.430546 TACAAAATGCAGCAAACGGG 57.569 45.000 0.00 0.00 0.00 5.28
401 426 0.323302 TGCAGCAAACGGGATCAGTA 59.677 50.000 0.00 0.00 0.00 2.74
446 472 4.834357 TGATCAAACAGAACACCATGTG 57.166 40.909 0.00 0.00 39.75 3.21
453 479 0.401738 AGAACACCATGTGTCCTGGG 59.598 55.000 0.00 0.00 46.79 4.45
472 498 0.179108 GATGAAGCGAGCGGTACCTT 60.179 55.000 10.90 0.00 0.00 3.50
522 548 4.256920 GTCTTGTCTGACATGCTTGGTAT 58.743 43.478 11.86 0.00 36.97 2.73
552 578 4.008330 CTGAAGAATCTGTCAATGCTGGT 58.992 43.478 0.00 0.00 0.00 4.00
571 597 2.159114 GGTGCTCAAAAGTTTCTTGCCA 60.159 45.455 0.00 0.00 0.00 4.92
702 734 5.714806 ACAAGTTCCTTGAAGTTTCTTCCAA 59.285 36.000 10.73 2.20 43.42 3.53
716 748 1.001378 CTTCCAACCTTGCAAGAACCG 60.001 52.381 28.05 13.14 0.00 4.44
729 761 3.496884 GCAAGAACCGTTCAATGTAGACA 59.503 43.478 13.69 0.00 0.00 3.41
923 955 3.899052 TGTATAAGGCCGGGTATATGC 57.101 47.619 2.18 0.00 0.00 3.14
934 966 2.027625 GTATATGCAGACCGGCGGC 61.028 63.158 28.71 19.04 38.26 6.53
1112 1145 0.532573 TCTGACATCCTCGACAAGGC 59.467 55.000 0.00 0.00 45.78 4.35
1275 1308 1.283613 AGAGACCGTCCTCTCACTGAT 59.716 52.381 0.00 0.00 39.14 2.90
1310 1343 2.912295 TGATGATCAGTGACAGGGGAAA 59.088 45.455 0.09 0.00 0.00 3.13
1380 1413 2.031163 GGCACTGCCTCAACGACT 59.969 61.111 13.28 0.00 46.69 4.18
1828 1868 2.106332 GACGCCTGGTATGGGACG 59.894 66.667 0.00 0.00 0.00 4.79
1829 1869 3.441011 GACGCCTGGTATGGGACGG 62.441 68.421 0.00 0.00 0.00 4.79
2419 2464 1.080569 CCAACCGCTGCAATTCACC 60.081 57.895 0.00 0.00 0.00 4.02
2609 2665 2.768527 TCTCCACCCATCTAGCTTTGAG 59.231 50.000 0.00 0.00 0.00 3.02
2673 2729 5.161358 CAACTCGTAGCTAGATTGTCAACA 58.839 41.667 0.00 0.00 0.00 3.33
2806 2862 3.498777 GGACAACAGACCTAAAGAACTGC 59.501 47.826 0.00 0.00 34.25 4.40
2809 2865 1.070134 ACAGACCTAAAGAACTGCGCA 59.930 47.619 10.98 10.98 34.25 6.09
2812 2868 3.189287 CAGACCTAAAGAACTGCGCATTT 59.811 43.478 12.24 12.83 0.00 2.32
2813 2869 3.821033 AGACCTAAAGAACTGCGCATTTT 59.179 39.130 12.24 7.44 0.00 1.82
2814 2870 4.278419 AGACCTAAAGAACTGCGCATTTTT 59.722 37.500 12.24 7.70 0.00 1.94
2833 2965 4.946478 TTTTCATGGATCGGTGGTTTTT 57.054 36.364 0.00 0.00 0.00 1.94
2934 3069 9.720769 TTTCGTAGAGGAAATGAGAAAAACTAT 57.279 29.630 0.00 0.00 38.43 2.12
3015 3157 7.008440 AGTTCTAAAAACGGTTGAAGTGTAC 57.992 36.000 0.00 0.00 0.00 2.90
3025 3167 4.576879 GGTTGAAGTGTACTCCTAAAGGG 58.423 47.826 0.00 0.00 35.41 3.95
3043 3185 9.007901 CCTAAAGGGCAAATAAGATATGAGAAG 57.992 37.037 0.00 0.00 0.00 2.85
3223 3375 8.629158 TCACAAAGTTGCAACAATAATTAGACT 58.371 29.630 30.11 2.72 0.00 3.24
3269 3430 1.070134 TCGTGGACCAGAACTCTTTGG 59.930 52.381 0.00 0.00 40.38 3.28
3271 3432 0.110486 TGGACCAGAACTCTTTGGCC 59.890 55.000 0.00 0.00 38.03 5.36
3272 3433 0.110486 GGACCAGAACTCTTTGGCCA 59.890 55.000 0.00 0.00 38.03 5.36
3274 3435 1.815003 GACCAGAACTCTTTGGCCATG 59.185 52.381 6.09 2.48 38.03 3.66
3275 3436 0.529378 CCAGAACTCTTTGGCCATGC 59.471 55.000 6.09 0.00 0.00 4.06
3276 3437 1.250328 CAGAACTCTTTGGCCATGCA 58.750 50.000 6.09 0.00 0.00 3.96
3277 3438 1.614903 CAGAACTCTTTGGCCATGCAA 59.385 47.619 6.09 0.00 0.00 4.08
3278 3439 1.891150 AGAACTCTTTGGCCATGCAAG 59.109 47.619 6.09 7.96 0.00 4.01
3279 3440 0.319405 AACTCTTTGGCCATGCAAGC 59.681 50.000 6.09 3.55 0.00 4.01
3280 3441 0.828762 ACTCTTTGGCCATGCAAGCA 60.829 50.000 6.09 0.00 0.00 3.91
3281 3442 0.389426 CTCTTTGGCCATGCAAGCAC 60.389 55.000 6.09 4.50 0.00 4.40
3282 3443 0.828762 TCTTTGGCCATGCAAGCACT 60.829 50.000 6.09 0.00 0.00 4.40
3283 3444 0.389426 CTTTGGCCATGCAAGCACTC 60.389 55.000 6.09 0.00 0.00 3.51
3284 3445 1.818959 TTTGGCCATGCAAGCACTCC 61.819 55.000 6.09 0.00 0.00 3.85
3286 3447 1.980772 GGCCATGCAAGCACTCCTT 60.981 57.895 13.44 0.00 0.00 3.36
3293 3454 3.806591 CAAGCACTCCTTGGCAATG 57.193 52.632 0.00 0.00 45.78 2.82
3296 3457 0.828762 AGCACTCCTTGGCAATGCAA 60.829 50.000 21.57 0.00 38.79 4.08
3297 3458 0.033781 GCACTCCTTGGCAATGCAAA 59.966 50.000 16.39 0.00 36.30 3.68
3299 3460 1.068895 CACTCCTTGGCAATGCAAACA 59.931 47.619 7.79 0.00 0.00 2.83
3419 3611 1.308877 AATCTACCCCTTGCCATGGT 58.691 50.000 14.67 0.00 36.15 3.55
3432 3648 0.033796 CCATGGTTGCTCCTGGACAT 60.034 55.000 2.57 0.00 36.96 3.06
3439 3660 1.225704 GCTCCTGGACATTGGGAGG 59.774 63.158 9.78 1.45 44.76 4.30
3440 3661 1.566298 GCTCCTGGACATTGGGAGGT 61.566 60.000 9.78 0.00 44.76 3.85
3507 3751 5.851693 TCAAGTATTCCATATCACCAGGGAT 59.148 40.000 0.00 0.00 0.00 3.85
3574 3818 5.335827 CGATAGTTTAAATGCTCTCAGGC 57.664 43.478 0.00 0.00 0.00 4.85
4072 4327 2.132686 AGGGCCGGGTATTTTCTATGT 58.867 47.619 2.18 0.00 0.00 2.29
4127 4382 2.503331 CACCACTTTAGCATCACCACA 58.497 47.619 0.00 0.00 0.00 4.17
4128 4383 2.226437 CACCACTTTAGCATCACCACAC 59.774 50.000 0.00 0.00 0.00 3.82
4141 4396 3.013921 TCACCACACCTGACTGAAAAAC 58.986 45.455 0.00 0.00 0.00 2.43
4488 4817 4.692155 TCGCTGGCCTACTTTACTTTTTAC 59.308 41.667 3.32 0.00 0.00 2.01
4492 4821 4.756135 TGGCCTACTTTACTTTTTACCGTG 59.244 41.667 3.32 0.00 0.00 4.94
4530 4859 7.759465 AGATACTCAAAAAGAATCTGCACATG 58.241 34.615 0.00 0.00 0.00 3.21
5005 5825 1.484240 AGCCTGAGATGTTCTGGTAGC 59.516 52.381 2.70 0.00 44.48 3.58
5091 5920 2.368439 ACCGCAGCAACACATATCATT 58.632 42.857 0.00 0.00 0.00 2.57
5279 6269 3.602483 TCCCGTATTTGTTTAGCAGGAC 58.398 45.455 0.00 0.00 0.00 3.85
5444 6435 4.065789 ACGAAGATGTCCTCTTGGAAAAC 58.934 43.478 6.84 0.00 44.42 2.43
5445 6436 4.065088 CGAAGATGTCCTCTTGGAAAACA 58.935 43.478 0.00 0.00 44.42 2.83
5446 6437 4.697352 CGAAGATGTCCTCTTGGAAAACAT 59.303 41.667 0.00 0.00 44.42 2.71
5563 6571 2.412847 CCGCATTTCGAGGTTCAAGTTC 60.413 50.000 0.00 0.00 41.67 3.01
5568 6576 3.731652 TTCGAGGTTCAAGTTCCGTAA 57.268 42.857 0.00 0.00 0.00 3.18
5937 6948 5.710099 AGACACAATGGTTCCGTTCATATTT 59.290 36.000 0.00 0.00 0.00 1.40
6040 7052 1.425066 AGACAATGCTCCAAGGGTTGA 59.575 47.619 0.00 0.00 0.00 3.18
6044 7056 2.892852 CAATGCTCCAAGGGTTGAAGAA 59.107 45.455 0.00 0.00 0.00 2.52
6095 7119 1.009389 CGACGTCCTTTCCTGCAGTC 61.009 60.000 13.81 0.00 0.00 3.51
6096 7120 0.033504 GACGTCCTTTCCTGCAGTCA 59.966 55.000 13.81 0.00 0.00 3.41
6103 7127 2.224378 CCTTTCCTGCAGTCAGTCTTCA 60.224 50.000 13.81 0.00 38.66 3.02
6250 7274 6.457663 GCATTGACTACACAGTACACACAAAA 60.458 38.462 0.00 0.00 34.21 2.44
6281 7305 3.969287 TCAGAGTTTCAGTCATCCCAG 57.031 47.619 0.00 0.00 0.00 4.45
6354 7397 0.343372 TCACCAGGGGGAGCTAGATT 59.657 55.000 0.00 0.00 38.05 2.40
6746 7792 0.528901 TAATTCGTGGGATCGCGGTG 60.529 55.000 6.13 0.00 45.85 4.94
6920 7966 4.084537 ACAGCGTACGTTTGAAATCTCAAG 60.085 41.667 22.67 3.21 42.48 3.02
6927 7973 4.511826 ACGTTTGAAATCTCAAGTCCTCAC 59.488 41.667 0.00 0.00 42.48 3.51
6935 7981 5.799827 ATCTCAAGTCCTCACCTATTAGC 57.200 43.478 0.00 0.00 0.00 3.09
7032 8084 7.066404 GGAGAGACCTCAATTAACTCCATTTTC 59.934 40.741 0.00 0.00 41.20 2.29
7194 8247 5.236282 GTGTTCCTTCCTCAAGTAAGTACC 58.764 45.833 0.00 0.00 0.00 3.34
7195 8248 4.903049 TGTTCCTTCCTCAAGTAAGTACCA 59.097 41.667 0.00 0.00 0.00 3.25
7196 8249 5.367352 TGTTCCTTCCTCAAGTAAGTACCAA 59.633 40.000 0.00 0.00 0.00 3.67
7197 8250 5.740290 TCCTTCCTCAAGTAAGTACCAAG 57.260 43.478 0.00 0.00 0.00 3.61
7198 8251 5.152934 TCCTTCCTCAAGTAAGTACCAAGT 58.847 41.667 0.00 0.00 0.00 3.16
7199 8252 6.317312 TCCTTCCTCAAGTAAGTACCAAGTA 58.683 40.000 0.00 0.00 0.00 2.24
7203 8256 5.244626 TCCTCAAGTAAGTACCAAGTACACC 59.755 44.000 7.58 0.00 41.03 4.16
7208 8261 7.712205 TCAAGTAAGTACCAAGTACACCTTTTC 59.288 37.037 7.58 0.00 41.03 2.29
7211 8264 8.927411 AGTAAGTACCAAGTACACCTTTTCTAA 58.073 33.333 7.58 0.00 41.03 2.10
7212 8265 9.201127 GTAAGTACCAAGTACACCTTTTCTAAG 57.799 37.037 7.58 0.00 41.03 2.18
7216 8269 6.060136 ACCAAGTACACCTTTTCTAAGTTCC 58.940 40.000 0.00 0.00 0.00 3.62
7217 8270 6.059484 CCAAGTACACCTTTTCTAAGTTCCA 58.941 40.000 0.00 0.00 0.00 3.53
7218 8271 6.544564 CCAAGTACACCTTTTCTAAGTTCCAA 59.455 38.462 0.00 0.00 0.00 3.53
7219 8272 7.067737 CCAAGTACACCTTTTCTAAGTTCCAAA 59.932 37.037 0.00 0.00 0.00 3.28
7220 8273 8.463607 CAAGTACACCTTTTCTAAGTTCCAAAA 58.536 33.333 0.00 0.00 0.00 2.44
7221 8274 8.762481 AGTACACCTTTTCTAAGTTCCAAAAT 57.238 30.769 0.00 0.00 0.00 1.82
7222 8275 9.856162 AGTACACCTTTTCTAAGTTCCAAAATA 57.144 29.630 0.00 0.00 0.00 1.40
7464 8751 1.538950 GAAGAGGCCTTTTCAGTGCTG 59.461 52.381 26.87 0.00 31.62 4.41
7551 8844 2.954989 TGAAGTTGTGGCAATGCTAACA 59.045 40.909 17.34 13.92 0.00 2.41
7579 8872 3.506096 CACAGCTCCGCATGCCAG 61.506 66.667 13.15 9.56 0.00 4.85
7663 8956 2.125912 CGAGCCGGACCTTGTGAG 60.126 66.667 5.05 0.00 0.00 3.51
7664 8957 2.932234 CGAGCCGGACCTTGTGAGT 61.932 63.158 5.05 0.00 0.00 3.41
7665 8958 1.079750 GAGCCGGACCTTGTGAGTC 60.080 63.158 5.05 0.00 0.00 3.36
7704 8997 6.772716 ACTTGAACAGTTTGTGATATCTTGGT 59.227 34.615 3.98 0.00 27.32 3.67
7781 9101 1.664965 GGTGACACGGTGAGAGTGC 60.665 63.158 16.29 0.00 42.94 4.40
7797 9117 2.939103 GAGTGCGTGCAAGAGGAATATT 59.061 45.455 2.99 0.00 0.00 1.28
7798 9118 4.119862 GAGTGCGTGCAAGAGGAATATTA 58.880 43.478 2.99 0.00 0.00 0.98
7845 9165 4.623932 TTGTCTCTTAACACTGGATGCT 57.376 40.909 0.00 0.00 0.00 3.79
7899 9227 5.559427 TGTTCAAATTACGACATGATGGG 57.441 39.130 0.00 0.00 0.00 4.00
7913 9241 4.080582 ACATGATGGGTGGAACTTTCGATA 60.081 41.667 0.00 0.00 36.74 2.92
7926 9254 8.286800 TGGAACTTTCGATAATTAACACACTTG 58.713 33.333 0.00 0.00 0.00 3.16
7938 9266 2.238942 CACACTTGGTGTAGCACAGA 57.761 50.000 2.92 0.00 45.65 3.41
7939 9267 2.771089 CACACTTGGTGTAGCACAGAT 58.229 47.619 2.92 0.00 45.65 2.90
7940 9268 2.738846 CACACTTGGTGTAGCACAGATC 59.261 50.000 2.92 0.00 45.65 2.75
7941 9269 2.368548 ACACTTGGTGTAGCACAGATCA 59.631 45.455 1.18 0.00 45.56 2.92
7942 9270 2.738846 CACTTGGTGTAGCACAGATCAC 59.261 50.000 0.00 0.00 35.86 3.06
7943 9271 2.368548 ACTTGGTGTAGCACAGATCACA 59.631 45.455 0.00 0.00 35.86 3.58
7944 9272 2.455674 TGGTGTAGCACAGATCACAC 57.544 50.000 0.00 0.00 40.40 3.82
7945 9273 1.970640 TGGTGTAGCACAGATCACACT 59.029 47.619 10.49 0.00 40.82 3.55
7946 9274 2.029020 TGGTGTAGCACAGATCACACTC 60.029 50.000 10.49 3.67 40.82 3.51
7947 9275 2.611518 GTGTAGCACAGATCACACTCC 58.388 52.381 0.00 0.00 38.56 3.85
7948 9276 2.232452 GTGTAGCACAGATCACACTCCT 59.768 50.000 0.00 0.00 38.56 3.69
7949 9277 2.493675 TGTAGCACAGATCACACTCCTC 59.506 50.000 0.00 0.00 0.00 3.71
7950 9278 0.901124 AGCACAGATCACACTCCTCC 59.099 55.000 0.00 0.00 0.00 4.30
7951 9279 0.107945 GCACAGATCACACTCCTCCC 60.108 60.000 0.00 0.00 0.00 4.30
7952 9280 0.539051 CACAGATCACACTCCTCCCC 59.461 60.000 0.00 0.00 0.00 4.81
7953 9281 0.618968 ACAGATCACACTCCTCCCCC 60.619 60.000 0.00 0.00 0.00 5.40
7954 9282 0.326048 CAGATCACACTCCTCCCCCT 60.326 60.000 0.00 0.00 0.00 4.79
7955 9283 0.031616 AGATCACACTCCTCCCCCTC 60.032 60.000 0.00 0.00 0.00 4.30
7956 9284 1.003573 ATCACACTCCTCCCCCTCC 59.996 63.158 0.00 0.00 0.00 4.30
7957 9285 2.553438 ATCACACTCCTCCCCCTCCC 62.553 65.000 0.00 0.00 0.00 4.30
7958 9286 4.026357 ACACTCCTCCCCCTCCCC 62.026 72.222 0.00 0.00 0.00 4.81
7959 9287 4.825679 CACTCCTCCCCCTCCCCC 62.826 77.778 0.00 0.00 0.00 5.40
8266 9594 3.174265 CCCTCCCATGCCCTCTCC 61.174 72.222 0.00 0.00 0.00 3.71
8267 9595 3.174265 CCTCCCATGCCCTCTCCC 61.174 72.222 0.00 0.00 0.00 4.30
8268 9596 3.174265 CTCCCATGCCCTCTCCCC 61.174 72.222 0.00 0.00 0.00 4.81
8271 9599 3.866582 CCATGCCCTCTCCCCGTC 61.867 72.222 0.00 0.00 0.00 4.79
8272 9600 2.765807 CATGCCCTCTCCCCGTCT 60.766 66.667 0.00 0.00 0.00 4.18
8273 9601 2.444895 ATGCCCTCTCCCCGTCTC 60.445 66.667 0.00 0.00 0.00 3.36
8275 9603 4.816984 GCCCTCTCCCCGTCTCGA 62.817 72.222 0.00 0.00 0.00 4.04
8276 9604 2.829458 CCCTCTCCCCGTCTCGAC 60.829 72.222 0.00 0.00 0.00 4.20
8277 9605 2.829458 CCTCTCCCCGTCTCGACC 60.829 72.222 0.00 0.00 0.00 4.79
8278 9606 2.829458 CTCTCCCCGTCTCGACCC 60.829 72.222 0.00 0.00 0.00 4.46
8279 9607 4.437587 TCTCCCCGTCTCGACCCC 62.438 72.222 0.00 0.00 0.00 4.95
8294 9622 2.283809 CCCCCTCCTCGTCCATCT 59.716 66.667 0.00 0.00 0.00 2.90
8295 9623 1.834822 CCCCCTCCTCGTCCATCTC 60.835 68.421 0.00 0.00 0.00 2.75
8296 9624 1.231641 CCCCTCCTCGTCCATCTCT 59.768 63.158 0.00 0.00 0.00 3.10
8297 9625 0.825840 CCCCTCCTCGTCCATCTCTC 60.826 65.000 0.00 0.00 0.00 3.20
8298 9626 0.184933 CCCTCCTCGTCCATCTCTCT 59.815 60.000 0.00 0.00 0.00 3.10
8299 9627 1.410932 CCCTCCTCGTCCATCTCTCTT 60.411 57.143 0.00 0.00 0.00 2.85
8300 9628 1.953686 CCTCCTCGTCCATCTCTCTTC 59.046 57.143 0.00 0.00 0.00 2.87
8301 9629 2.649190 CTCCTCGTCCATCTCTCTTCA 58.351 52.381 0.00 0.00 0.00 3.02
8302 9630 2.357637 CTCCTCGTCCATCTCTCTTCAC 59.642 54.545 0.00 0.00 0.00 3.18
8303 9631 1.407258 CCTCGTCCATCTCTCTTCACC 59.593 57.143 0.00 0.00 0.00 4.02
8304 9632 1.064803 CTCGTCCATCTCTCTTCACCG 59.935 57.143 0.00 0.00 0.00 4.94
8305 9633 0.526524 CGTCCATCTCTCTTCACCGC 60.527 60.000 0.00 0.00 0.00 5.68
8306 9634 0.179097 GTCCATCTCTCTTCACCGCC 60.179 60.000 0.00 0.00 0.00 6.13
8307 9635 1.227089 CCATCTCTCTTCACCGCCG 60.227 63.158 0.00 0.00 0.00 6.46
8308 9636 1.880340 CATCTCTCTTCACCGCCGC 60.880 63.158 0.00 0.00 0.00 6.53
8309 9637 3.082579 ATCTCTCTTCACCGCCGCC 62.083 63.158 0.00 0.00 0.00 6.13
8365 9693 4.144703 GACGGGCGTCCCTTCCTC 62.145 72.222 0.00 0.00 42.67 3.71
8367 9695 4.452733 CGGGCGTCCCTTCCTCAC 62.453 72.222 0.00 0.00 42.67 3.51
8368 9696 4.452733 GGGCGTCCCTTCCTCACG 62.453 72.222 0.00 0.00 41.34 4.35
8376 9704 4.069232 CTTCCTCACGCGCCTGGA 62.069 66.667 5.73 8.40 0.00 3.86
8377 9705 3.997064 CTTCCTCACGCGCCTGGAG 62.997 68.421 5.73 8.41 0.00 3.86
8398 9726 2.364448 GAGTCGGGGCTCCCTCTT 60.364 66.667 0.00 0.00 42.67 2.85
8399 9727 2.685380 AGTCGGGGCTCCCTCTTG 60.685 66.667 0.00 0.00 42.67 3.02
8400 9728 4.475135 GTCGGGGCTCCCTCTTGC 62.475 72.222 0.00 0.00 42.67 4.01
8432 9760 4.070552 GCTCGGTGGCGGAGTTCT 62.071 66.667 5.78 0.00 34.09 3.01
8433 9761 2.182030 CTCGGTGGCGGAGTTCTC 59.818 66.667 0.00 0.00 0.00 2.87
8434 9762 3.358076 CTCGGTGGCGGAGTTCTCC 62.358 68.421 8.66 8.66 0.00 3.71
8442 9770 3.839432 GGAGTTCTCCGGGCCTCG 61.839 72.222 0.84 4.41 38.88 4.63
8455 9783 4.148825 CCTCGGGTGCCCTCGAAG 62.149 72.222 5.64 0.00 34.87 3.79
8456 9784 4.821589 CTCGGGTGCCCTCGAAGC 62.822 72.222 5.64 0.18 34.87 3.86
8527 9855 3.801997 CCCGCTTGGCCCAGATCT 61.802 66.667 8.31 0.00 0.00 2.75
8528 9856 2.515523 CCGCTTGGCCCAGATCTG 60.516 66.667 16.24 16.24 0.00 2.90
8538 9866 2.892025 CCAGATCTGGGCCCTTTTG 58.108 57.895 31.14 12.87 46.81 2.44
8539 9867 0.685458 CCAGATCTGGGCCCTTTTGG 60.685 60.000 31.14 17.87 46.81 3.28
8549 9877 4.039042 CCTTTTGGGCCCCATCTG 57.961 61.111 22.27 5.57 31.53 2.90
8550 9878 1.686800 CCTTTTGGGCCCCATCTGG 60.687 63.158 22.27 11.49 31.53 3.86
8593 9921 2.099831 CGTGACGACGTAGCTCCC 59.900 66.667 0.00 0.00 40.91 4.30
8594 9922 2.396955 CGTGACGACGTAGCTCCCT 61.397 63.158 0.00 0.00 40.91 4.20
8595 9923 1.086067 CGTGACGACGTAGCTCCCTA 61.086 60.000 0.00 0.00 40.91 3.53
8596 9924 0.656785 GTGACGACGTAGCTCCCTAG 59.343 60.000 0.00 0.00 0.00 3.02
8597 9925 0.251354 TGACGACGTAGCTCCCTAGT 59.749 55.000 0.00 0.00 0.00 2.57
8598 9926 0.656785 GACGACGTAGCTCCCTAGTG 59.343 60.000 0.00 0.00 0.00 2.74
8599 9927 0.747283 ACGACGTAGCTCCCTAGTGG 60.747 60.000 0.00 0.00 0.00 4.00
8600 9928 0.747283 CGACGTAGCTCCCTAGTGGT 60.747 60.000 0.00 0.00 34.77 4.16
8601 9929 0.739561 GACGTAGCTCCCTAGTGGTG 59.260 60.000 0.00 0.00 34.77 4.17
8602 9930 0.330604 ACGTAGCTCCCTAGTGGTGA 59.669 55.000 0.00 0.00 34.77 4.02
8603 9931 1.025812 CGTAGCTCCCTAGTGGTGAG 58.974 60.000 0.00 0.00 35.27 3.51
8604 9932 1.404843 GTAGCTCCCTAGTGGTGAGG 58.595 60.000 0.00 0.00 33.82 3.86
8605 9933 1.008403 TAGCTCCCTAGTGGTGAGGT 58.992 55.000 0.00 0.00 41.14 3.85
8606 9934 0.616111 AGCTCCCTAGTGGTGAGGTG 60.616 60.000 0.00 0.00 38.77 4.00
8607 9935 0.614979 GCTCCCTAGTGGTGAGGTGA 60.615 60.000 4.17 0.00 33.82 4.02
8608 9936 1.479709 CTCCCTAGTGGTGAGGTGAG 58.520 60.000 0.00 0.00 34.77 3.51
8609 9937 0.041238 TCCCTAGTGGTGAGGTGAGG 59.959 60.000 0.00 0.00 34.77 3.86
8610 9938 1.617947 CCCTAGTGGTGAGGTGAGGC 61.618 65.000 0.00 0.00 31.52 4.70
8611 9939 1.513158 CTAGTGGTGAGGTGAGGCG 59.487 63.158 0.00 0.00 0.00 5.52
8612 9940 1.949847 CTAGTGGTGAGGTGAGGCGG 61.950 65.000 0.00 0.00 0.00 6.13
8632 9960 3.434319 GTGGCTGCGGTGGTGATG 61.434 66.667 0.00 0.00 0.00 3.07
8633 9961 4.720902 TGGCTGCGGTGGTGATGG 62.721 66.667 0.00 0.00 0.00 3.51
8636 9964 2.821366 CTGCGGTGGTGATGGCTC 60.821 66.667 0.00 0.00 0.00 4.70
8637 9965 4.408821 TGCGGTGGTGATGGCTCC 62.409 66.667 0.00 0.00 0.00 4.70
8639 9967 4.838152 CGGTGGTGATGGCTCCGG 62.838 72.222 0.00 0.00 37.92 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 8.584157 ACAGTTCAAACCAATAATGCTTCATAA 58.416 29.630 0.00 0.00 0.00 1.90
53 54 4.437239 CTGGCATCGACAGATTCTAGTTT 58.563 43.478 0.00 0.00 42.14 2.66
57 58 1.269257 CGCTGGCATCGACAGATTCTA 60.269 52.381 4.45 0.00 42.14 2.10
89 111 0.465287 AAAACTGGCTGGGCAACAAG 59.535 50.000 0.00 0.00 39.74 3.16
141 163 3.173151 TCAGATCTAGCCTGTTGACCAA 58.827 45.455 0.00 0.00 33.57 3.67
162 184 1.355720 AGCAAGGCTGGTAGGACATTT 59.644 47.619 0.00 0.00 37.57 2.32
165 187 1.555075 CTTAGCAAGGCTGGTAGGACA 59.445 52.381 0.07 0.00 40.10 4.02
166 188 1.831736 TCTTAGCAAGGCTGGTAGGAC 59.168 52.381 0.07 0.00 40.10 3.85
169 191 3.557595 CGAATTCTTAGCAAGGCTGGTAG 59.442 47.826 3.52 0.00 40.10 3.18
245 270 1.002033 CTGCATTTCTCTAATGGCCGC 60.002 52.381 0.00 0.00 43.20 6.53
252 277 4.164822 GCTGTTTGCTGCATTTCTCTAA 57.835 40.909 1.84 0.00 39.07 2.10
315 340 3.378427 AGCAAAGTCAGAGGTTTGAACAC 59.622 43.478 8.76 0.00 35.99 3.32
367 392 2.754552 TGCTGCATTTTGTATGACCCTC 59.245 45.455 0.00 0.00 0.00 4.30
394 419 2.594654 CGAACGACTGCAACTACTGATC 59.405 50.000 0.00 0.00 0.00 2.92
401 426 0.033504 ATCACCGAACGACTGCAACT 59.966 50.000 0.00 0.00 0.00 3.16
446 472 1.522580 GCTCGCTTCATCCCAGGAC 60.523 63.158 0.00 0.00 0.00 3.85
453 479 0.179108 AAGGTACCGCTCGCTTCATC 60.179 55.000 6.18 0.00 0.00 2.92
522 548 7.148356 GCATTGACAGATTCTTCAGTACATTCA 60.148 37.037 0.00 0.00 0.00 2.57
552 578 2.101249 CCTGGCAAGAAACTTTTGAGCA 59.899 45.455 0.00 0.00 0.00 4.26
571 597 0.321122 CTCCAGCGAGAAACTTGCCT 60.321 55.000 7.29 0.00 41.50 4.75
702 734 1.757682 TTGAACGGTTCTTGCAAGGT 58.242 45.000 25.73 13.00 0.00 3.50
716 748 4.451096 ACATCAACCGTGTCTACATTGAAC 59.549 41.667 2.69 0.00 36.04 3.18
729 761 3.417069 TCCTTGATTGACATCAACCGT 57.583 42.857 0.00 0.00 43.32 4.83
1112 1145 3.487202 CGTCGGTGATGTTGCGGG 61.487 66.667 0.00 0.00 0.00 6.13
1186 1219 3.072184 CCAAGGTATCTCTTGCCTAGCAT 59.928 47.826 0.00 0.00 39.94 3.79
1291 1324 2.025887 GGTTTCCCCTGTCACTGATCAT 60.026 50.000 0.00 0.00 0.00 2.45
1304 1337 4.034285 TCAATCAAGAGAAGGTTTCCCC 57.966 45.455 0.00 0.00 0.00 4.81
1310 1343 4.202202 CGGAGCTATCAATCAAGAGAAGGT 60.202 45.833 0.00 0.00 0.00 3.50
1380 1413 2.048784 GACTCGAGCAGCTGCACA 60.049 61.111 38.24 20.94 45.16 4.57
2514 2560 3.341823 AGTTAGCAGCACCAGAAATCTG 58.658 45.455 3.37 3.37 43.40 2.90
2701 2757 4.402056 TGACCACCTTAGTTGCTATAGC 57.598 45.455 18.18 18.18 42.50 2.97
2704 2760 6.067217 AGAATTGACCACCTTAGTTGCTAT 57.933 37.500 0.00 0.00 0.00 2.97
2748 2804 6.403866 TCATGCAAGTTCAAAATTACCACT 57.596 33.333 0.00 0.00 0.00 4.00
2812 2868 4.946478 AAAAACCACCGATCCATGAAAA 57.054 36.364 0.00 0.00 0.00 2.29
2833 2965 7.591821 ACTAGCCCCTATGGAAATTTATTGAA 58.408 34.615 0.00 0.00 35.39 2.69
2962 3104 2.081425 AATTTCCCGCAGCAACGCAA 62.081 50.000 0.00 0.00 0.00 4.85
2963 3105 1.237954 TAATTTCCCGCAGCAACGCA 61.238 50.000 0.00 0.00 0.00 5.24
3015 3157 8.378565 TCTCATATCTTATTTGCCCTTTAGGAG 58.621 37.037 0.00 0.00 38.24 3.69
3043 3185 5.572896 CACTTCAGCGGTAAAATTCATTTCC 59.427 40.000 0.00 0.00 32.27 3.13
3228 3380 8.405531 CCACGAATTTCATTACTGTCCATAAAT 58.594 33.333 0.00 0.00 0.00 1.40
3250 3411 1.512926 CCAAAGAGTTCTGGTCCACG 58.487 55.000 0.00 0.00 0.00 4.94
3269 3430 1.214589 CAAGGAGTGCTTGCATGGC 59.785 57.895 11.73 3.56 0.00 4.40
3271 3432 1.214589 GCCAAGGAGTGCTTGCATG 59.785 57.895 18.25 6.79 0.00 4.06
3272 3433 0.828762 TTGCCAAGGAGTGCTTGCAT 60.829 50.000 18.25 0.00 0.00 3.96
3274 3435 0.389426 CATTGCCAAGGAGTGCTTGC 60.389 55.000 18.25 13.80 0.00 4.01
3275 3436 0.389426 GCATTGCCAAGGAGTGCTTG 60.389 55.000 16.88 16.88 33.25 4.01
3276 3437 0.828762 TGCATTGCCAAGGAGTGCTT 60.829 50.000 6.12 0.00 36.78 3.91
3277 3438 0.828762 TTGCATTGCCAAGGAGTGCT 60.829 50.000 6.12 0.00 36.78 4.40
3278 3439 0.033781 TTTGCATTGCCAAGGAGTGC 59.966 50.000 6.12 0.00 36.39 4.40
3279 3440 1.068895 TGTTTGCATTGCCAAGGAGTG 59.931 47.619 6.12 0.00 0.00 3.51
3280 3441 1.069049 GTGTTTGCATTGCCAAGGAGT 59.931 47.619 6.12 0.00 0.00 3.85
3281 3442 1.068895 TGTGTTTGCATTGCCAAGGAG 59.931 47.619 6.12 0.00 0.00 3.69
3282 3443 1.117994 TGTGTTTGCATTGCCAAGGA 58.882 45.000 6.12 0.00 0.00 3.36
3283 3444 1.202557 AGTGTGTTTGCATTGCCAAGG 60.203 47.619 6.12 0.00 0.00 3.61
3284 3445 2.228138 AGTGTGTTTGCATTGCCAAG 57.772 45.000 6.12 0.00 0.00 3.61
3286 3447 2.428530 TGTAAGTGTGTTTGCATTGCCA 59.571 40.909 6.12 0.00 0.00 4.92
3287 3448 3.090952 TGTAAGTGTGTTTGCATTGCC 57.909 42.857 6.12 0.00 0.00 4.52
3288 3449 3.862267 TGTTGTAAGTGTGTTTGCATTGC 59.138 39.130 0.46 0.46 0.00 3.56
3289 3450 5.229887 GTCTGTTGTAAGTGTGTTTGCATTG 59.770 40.000 0.00 0.00 0.00 2.82
3290 3451 5.105957 TGTCTGTTGTAAGTGTGTTTGCATT 60.106 36.000 0.00 0.00 0.00 3.56
3291 3452 4.397730 TGTCTGTTGTAAGTGTGTTTGCAT 59.602 37.500 0.00 0.00 0.00 3.96
3292 3453 3.753797 TGTCTGTTGTAAGTGTGTTTGCA 59.246 39.130 0.00 0.00 0.00 4.08
3293 3454 4.349663 TGTCTGTTGTAAGTGTGTTTGC 57.650 40.909 0.00 0.00 0.00 3.68
3296 3457 5.239306 CCATGATGTCTGTTGTAAGTGTGTT 59.761 40.000 0.00 0.00 0.00 3.32
3297 3458 4.756642 CCATGATGTCTGTTGTAAGTGTGT 59.243 41.667 0.00 0.00 0.00 3.72
3299 3460 4.326826 CCCATGATGTCTGTTGTAAGTGT 58.673 43.478 0.00 0.00 0.00 3.55
3419 3611 0.329261 CTCCCAATGTCCAGGAGCAA 59.671 55.000 0.00 0.00 40.75 3.91
3432 3648 2.043939 TCTACTAGAAGGCACCTCCCAA 59.956 50.000 0.00 0.00 34.51 4.12
3439 3660 5.392057 GGCACAAAAATCTACTAGAAGGCAC 60.392 44.000 0.00 0.00 0.00 5.01
3440 3661 4.700213 GGCACAAAAATCTACTAGAAGGCA 59.300 41.667 0.00 0.00 0.00 4.75
3507 3751 5.420104 TGATCTATGAGCTTCAGAGTTGTGA 59.580 40.000 7.40 0.00 37.06 3.58
3753 4005 7.841956 TCGGCTATCCCATTCATTTTTAAAAA 58.158 30.769 15.38 15.38 0.00 1.94
3754 4006 7.411486 TCGGCTATCCCATTCATTTTTAAAA 57.589 32.000 0.00 0.00 0.00 1.52
3755 4007 7.411486 TTCGGCTATCCCATTCATTTTTAAA 57.589 32.000 0.00 0.00 0.00 1.52
3756 4008 7.595819 ATTCGGCTATCCCATTCATTTTTAA 57.404 32.000 0.00 0.00 0.00 1.52
3757 4009 7.255801 GGAATTCGGCTATCCCATTCATTTTTA 60.256 37.037 0.00 0.00 33.31 1.52
3762 4014 3.074390 TGGAATTCGGCTATCCCATTCAT 59.926 43.478 0.00 0.00 33.31 2.57
3918 4172 2.689471 ACATATGTCATTGCGCCATTGT 59.311 40.909 4.18 5.44 0.00 2.71
4072 4327 5.416271 AATCGGCTTGGAAGTTTACTCTA 57.584 39.130 0.00 0.00 0.00 2.43
4115 4370 1.276138 CAGTCAGGTGTGGTGATGCTA 59.724 52.381 0.00 0.00 0.00 3.49
4127 4382 3.545703 CAGTCAGGTTTTTCAGTCAGGT 58.454 45.455 0.00 0.00 0.00 4.00
4128 4383 2.880890 CCAGTCAGGTTTTTCAGTCAGG 59.119 50.000 0.00 0.00 0.00 3.86
4141 4396 5.604758 TCAGAGATTATGTTCCAGTCAGG 57.395 43.478 0.00 0.00 39.47 3.86
4213 4469 1.971962 CGCGAACAAAGATTGAAGCAC 59.028 47.619 0.00 0.00 0.00 4.40
4381 4683 1.141053 AGAAGCGTGAAGTGTTTCCCT 59.859 47.619 0.00 0.00 32.09 4.20
4488 4817 1.990799 TCTATCGACAAGTTGCACGG 58.009 50.000 18.24 7.12 0.00 4.94
4492 4821 6.887376 TTTGAGTATCTATCGACAAGTTGC 57.113 37.500 1.81 0.00 34.92 4.17
4530 4859 2.659428 ACTTGAATTGCTATCTGCCCC 58.341 47.619 0.00 0.00 42.00 5.80
4815 5209 6.020360 GTCTTTTGAAACTTTGATGCAGTCAC 60.020 38.462 0.00 0.00 36.32 3.67
5005 5825 0.894835 ACCTTTTATTTGCGGGGCAG 59.105 50.000 0.00 0.00 40.61 4.85
5091 5920 6.835488 CCTCTCAATTCCCCATAAATTTCTCA 59.165 38.462 0.00 0.00 0.00 3.27
5445 6436 9.762381 TGTCACCCCTAAAATGAAAGTTATAAT 57.238 29.630 0.00 0.00 0.00 1.28
5446 6437 9.589461 TTGTCACCCCTAAAATGAAAGTTATAA 57.411 29.630 0.00 0.00 0.00 0.98
5542 6533 1.156736 ACTTGAACCTCGAAATGCGG 58.843 50.000 0.00 0.00 41.33 5.69
5544 6535 2.412847 CGGAACTTGAACCTCGAAATGC 60.413 50.000 0.00 0.00 0.00 3.56
5920 6931 5.261216 ACCAAGAAATATGAACGGAACCAT 58.739 37.500 0.00 0.00 0.00 3.55
5926 6937 5.123186 TGCTACAACCAAGAAATATGAACGG 59.877 40.000 0.00 0.00 0.00 4.44
5937 6948 2.177394 TCGCAATGCTACAACCAAGA 57.823 45.000 2.94 0.00 0.00 3.02
5990 7002 3.942829 TGGAGGATTGTCTACTGCAAAG 58.057 45.455 0.00 0.00 29.43 2.77
6040 7052 3.140325 TCGGAGGAGCAACATTTTCTT 57.860 42.857 0.00 0.00 0.00 2.52
6044 7056 3.356529 AGATTCGGAGGAGCAACATTT 57.643 42.857 0.00 0.00 0.00 2.32
6086 7110 1.338484 GCATGAAGACTGACTGCAGGA 60.338 52.381 19.93 2.80 46.60 3.86
6095 7119 4.428209 CCTGTACTACAGCATGAAGACTG 58.572 47.826 10.36 0.00 44.63 3.51
6096 7120 3.118956 GCCTGTACTACAGCATGAAGACT 60.119 47.826 10.36 0.00 44.63 3.24
6196 7220 9.587772 GACAAGTTGTCAGTTCATACTATGTAT 57.412 33.333 27.37 0.00 46.22 2.29
6250 7274 7.050377 TGACTGAAACTCTGAATTCAAACTCT 58.950 34.615 9.88 0.00 35.31 3.24
6281 7305 2.772287 GGATATACTGAAGGGTGCAGC 58.228 52.381 7.55 7.55 36.86 5.25
6354 7397 6.058833 TCTTTACAGCAACTGTTCCATAACA 58.941 36.000 5.44 0.00 42.59 2.41
6612 7658 5.865085 AGGAATAGCAAGTTGTGTCTTACA 58.135 37.500 4.48 0.00 37.56 2.41
6743 7789 0.681243 GAAGCCATTCCAGACCCACC 60.681 60.000 0.00 0.00 0.00 4.61
6746 7792 1.026718 CGTGAAGCCATTCCAGACCC 61.027 60.000 0.00 0.00 34.28 4.46
6920 7966 3.451178 TGGAACAGCTAATAGGTGAGGAC 59.549 47.826 24.17 12.14 45.98 3.85
6927 7973 7.337942 AGACTTGAATTTGGAACAGCTAATAGG 59.662 37.037 0.00 0.00 42.39 2.57
6935 7981 6.876257 ACTAGCTAGACTTGAATTTGGAACAG 59.124 38.462 27.45 0.00 42.39 3.16
7039 8092 5.010012 CCACATATCCCCTTCATTTAGCAAC 59.990 44.000 0.00 0.00 0.00 4.17
7172 8225 4.903049 TGGTACTTACTTGAGGAAGGAACA 59.097 41.667 1.62 1.62 30.47 3.18
7194 8247 7.562454 TTGGAACTTAGAAAAGGTGTACTTG 57.438 36.000 0.00 0.00 39.96 3.16
7195 8248 8.584063 TTTTGGAACTTAGAAAAGGTGTACTT 57.416 30.769 0.00 0.00 42.52 2.24
7196 8249 8.762481 ATTTTGGAACTTAGAAAAGGTGTACT 57.238 30.769 0.00 0.00 37.01 2.73
7227 8280 9.583765 GGAAGAAATTAGAAGACGTGTACTTAT 57.416 33.333 0.00 0.00 0.00 1.73
7311 8386 3.365666 CGATATGGCCATGTTCAGAATGC 60.366 47.826 29.04 6.00 34.76 3.56
7317 8392 5.359292 TCATTTTTCGATATGGCCATGTTCA 59.641 36.000 29.04 8.65 0.00 3.18
7464 8751 0.963962 CAATATGGATGCACCTGGCC 59.036 55.000 0.00 0.00 43.89 5.36
7551 8844 2.124320 AGCTGTGTGCCGGTGTTT 60.124 55.556 1.90 0.00 44.23 2.83
7579 8872 3.948004 TATTGGCCGTGGGGTTGCC 62.948 63.158 0.00 0.00 45.56 4.52
7659 8952 1.204704 TGATGGATGGTCACGACTCAC 59.795 52.381 0.00 0.00 0.00 3.51
7660 8953 1.204704 GTGATGGATGGTCACGACTCA 59.795 52.381 0.00 0.00 36.92 3.41
7661 8954 1.927895 GTGATGGATGGTCACGACTC 58.072 55.000 0.00 0.00 36.92 3.36
7725 9018 2.815647 GGAGGAGGCGCTCAAACG 60.816 66.667 7.64 0.00 31.08 3.60
7781 9101 6.479990 TGTCTGAATAATATTCCTCTTGCACG 59.520 38.462 10.19 0.00 0.00 5.34
7797 9117 4.582869 AGAATGCTGCAACTGTCTGAATA 58.417 39.130 6.36 0.00 0.00 1.75
7798 9118 3.418995 AGAATGCTGCAACTGTCTGAAT 58.581 40.909 6.36 0.00 0.00 2.57
7845 9165 4.664150 AAGGAAAATGAAAACGAAGGCA 57.336 36.364 0.00 0.00 0.00 4.75
7899 9227 7.803724 AGTGTGTTAATTATCGAAAGTTCCAC 58.196 34.615 0.00 0.00 0.00 4.02
7926 9254 2.611518 GAGTGTGATCTGTGCTACACC 58.388 52.381 7.83 0.00 43.23 4.16
7929 9257 2.159170 GGAGGAGTGTGATCTGTGCTAC 60.159 54.545 0.00 0.00 0.00 3.58
7931 9259 0.901124 GGAGGAGTGTGATCTGTGCT 59.099 55.000 0.00 0.00 0.00 4.40
7932 9260 0.107945 GGGAGGAGTGTGATCTGTGC 60.108 60.000 0.00 0.00 0.00 4.57
7933 9261 0.539051 GGGGAGGAGTGTGATCTGTG 59.461 60.000 0.00 0.00 0.00 3.66
7934 9262 0.618968 GGGGGAGGAGTGTGATCTGT 60.619 60.000 0.00 0.00 0.00 3.41
7935 9263 0.326048 AGGGGGAGGAGTGTGATCTG 60.326 60.000 0.00 0.00 0.00 2.90
7936 9264 0.031616 GAGGGGGAGGAGTGTGATCT 60.032 60.000 0.00 0.00 0.00 2.75
7937 9265 1.051556 GGAGGGGGAGGAGTGTGATC 61.052 65.000 0.00 0.00 0.00 2.92
7938 9266 1.003573 GGAGGGGGAGGAGTGTGAT 59.996 63.158 0.00 0.00 0.00 3.06
7939 9267 2.450243 GGAGGGGGAGGAGTGTGA 59.550 66.667 0.00 0.00 0.00 3.58
7940 9268 2.689034 GGGAGGGGGAGGAGTGTG 60.689 72.222 0.00 0.00 0.00 3.82
7941 9269 4.026357 GGGGAGGGGGAGGAGTGT 62.026 72.222 0.00 0.00 0.00 3.55
7942 9270 4.825679 GGGGGAGGGGGAGGAGTG 62.826 77.778 0.00 0.00 0.00 3.51
8249 9577 3.174265 GGAGAGGGCATGGGAGGG 61.174 72.222 0.00 0.00 0.00 4.30
8250 9578 3.174265 GGGAGAGGGCATGGGAGG 61.174 72.222 0.00 0.00 0.00 4.30
8251 9579 3.174265 GGGGAGAGGGCATGGGAG 61.174 72.222 0.00 0.00 0.00 4.30
8254 9582 3.866582 GACGGGGAGAGGGCATGG 61.867 72.222 0.00 0.00 0.00 3.66
8255 9583 2.765807 AGACGGGGAGAGGGCATG 60.766 66.667 0.00 0.00 0.00 4.06
8256 9584 2.444895 GAGACGGGGAGAGGGCAT 60.445 66.667 0.00 0.00 0.00 4.40
8258 9586 4.816984 TCGAGACGGGGAGAGGGC 62.817 72.222 0.00 0.00 0.00 5.19
8259 9587 2.829458 GTCGAGACGGGGAGAGGG 60.829 72.222 0.00 0.00 0.00 4.30
8260 9588 2.829458 GGTCGAGACGGGGAGAGG 60.829 72.222 0.00 0.00 0.00 3.69
8261 9589 2.829458 GGGTCGAGACGGGGAGAG 60.829 72.222 0.00 0.00 0.00 3.20
8262 9590 4.437587 GGGGTCGAGACGGGGAGA 62.438 72.222 0.00 0.00 0.00 3.71
8277 9605 1.834822 GAGATGGACGAGGAGGGGG 60.835 68.421 0.00 0.00 0.00 5.40
8278 9606 0.825840 GAGAGATGGACGAGGAGGGG 60.826 65.000 0.00 0.00 0.00 4.79
8279 9607 0.184933 AGAGAGATGGACGAGGAGGG 59.815 60.000 0.00 0.00 0.00 4.30
8280 9608 1.953686 GAAGAGAGATGGACGAGGAGG 59.046 57.143 0.00 0.00 0.00 4.30
8281 9609 2.357637 GTGAAGAGAGATGGACGAGGAG 59.642 54.545 0.00 0.00 0.00 3.69
8282 9610 2.370349 GTGAAGAGAGATGGACGAGGA 58.630 52.381 0.00 0.00 0.00 3.71
8283 9611 1.407258 GGTGAAGAGAGATGGACGAGG 59.593 57.143 0.00 0.00 0.00 4.63
8284 9612 1.064803 CGGTGAAGAGAGATGGACGAG 59.935 57.143 0.00 0.00 0.00 4.18
8285 9613 1.095600 CGGTGAAGAGAGATGGACGA 58.904 55.000 0.00 0.00 0.00 4.20
8286 9614 0.526524 GCGGTGAAGAGAGATGGACG 60.527 60.000 0.00 0.00 0.00 4.79
8287 9615 0.179097 GGCGGTGAAGAGAGATGGAC 60.179 60.000 0.00 0.00 0.00 4.02
8288 9616 1.667154 CGGCGGTGAAGAGAGATGGA 61.667 60.000 0.00 0.00 0.00 3.41
8289 9617 1.227089 CGGCGGTGAAGAGAGATGG 60.227 63.158 0.00 0.00 0.00 3.51
8290 9618 1.880340 GCGGCGGTGAAGAGAGATG 60.880 63.158 9.78 0.00 0.00 2.90
8291 9619 2.496817 GCGGCGGTGAAGAGAGAT 59.503 61.111 9.78 0.00 0.00 2.75
8292 9620 3.760035 GGCGGCGGTGAAGAGAGA 61.760 66.667 9.78 0.00 0.00 3.10
8351 9679 4.452733 CGTGAGGAAGGGACGCCC 62.453 72.222 6.80 6.80 45.90 6.13
8359 9687 3.997064 CTCCAGGCGCGTGAGGAAG 62.997 68.421 30.22 17.01 0.00 3.46
8360 9688 4.069232 CTCCAGGCGCGTGAGGAA 62.069 66.667 30.22 12.02 0.00 3.36
8415 9743 3.991536 GAGAACTCCGCCACCGAGC 62.992 68.421 0.00 0.00 36.29 5.03
8416 9744 2.182030 GAGAACTCCGCCACCGAG 59.818 66.667 0.00 0.00 36.29 4.63
8417 9745 3.379445 GGAGAACTCCGCCACCGA 61.379 66.667 5.06 0.00 40.36 4.69
8425 9753 3.839432 CGAGGCCCGGAGAACTCC 61.839 72.222 0.73 10.51 46.18 3.85
8510 9838 3.801997 AGATCTGGGCCAAGCGGG 61.802 66.667 8.04 0.00 40.85 6.13
8511 9839 2.515523 CAGATCTGGGCCAAGCGG 60.516 66.667 15.38 0.00 0.00 5.52
8512 9840 2.515523 CCAGATCTGGGCCAAGCG 60.516 66.667 31.14 5.44 46.81 4.68
8521 9849 0.685458 CCCAAAAGGGCCCAGATCTG 60.685 60.000 27.56 16.24 34.21 2.90
8522 9850 1.699752 CCCAAAAGGGCCCAGATCT 59.300 57.895 27.56 0.00 34.21 2.75
8523 9851 4.362479 CCCAAAAGGGCCCAGATC 57.638 61.111 27.56 0.00 34.21 2.75
8531 9859 1.686800 CAGATGGGGCCCAAAAGGG 60.687 63.158 32.57 13.88 36.95 3.95
8532 9860 1.686800 CCAGATGGGGCCCAAAAGG 60.687 63.158 32.57 25.88 36.95 3.11
8533 9861 4.039042 CCAGATGGGGCCCAAAAG 57.961 61.111 32.57 21.03 36.95 2.27
8577 9905 0.656785 CTAGGGAGCTACGTCGTCAC 59.343 60.000 0.00 0.00 0.00 3.67
8578 9906 0.251354 ACTAGGGAGCTACGTCGTCA 59.749 55.000 0.00 0.00 0.00 4.35
8579 9907 0.656785 CACTAGGGAGCTACGTCGTC 59.343 60.000 0.00 0.00 0.00 4.20
8580 9908 0.747283 CCACTAGGGAGCTACGTCGT 60.747 60.000 2.21 2.21 40.01 4.34
8581 9909 0.747283 ACCACTAGGGAGCTACGTCG 60.747 60.000 0.00 0.00 41.15 5.12
8582 9910 0.739561 CACCACTAGGGAGCTACGTC 59.260 60.000 0.00 0.00 41.15 4.34
8583 9911 0.330604 TCACCACTAGGGAGCTACGT 59.669 55.000 0.00 0.00 41.15 3.57
8584 9912 1.025812 CTCACCACTAGGGAGCTACG 58.974 60.000 0.00 0.00 41.15 3.51
8585 9913 1.342175 ACCTCACCACTAGGGAGCTAC 60.342 57.143 0.00 0.00 41.15 3.58
8586 9914 1.008403 ACCTCACCACTAGGGAGCTA 58.992 55.000 0.00 0.00 41.15 3.32
8587 9915 0.616111 CACCTCACCACTAGGGAGCT 60.616 60.000 0.00 0.00 41.15 4.09
8588 9916 0.614979 TCACCTCACCACTAGGGAGC 60.615 60.000 0.00 0.00 41.15 4.70
8589 9917 1.479709 CTCACCTCACCACTAGGGAG 58.520 60.000 0.00 0.00 41.15 4.30
8590 9918 0.041238 CCTCACCTCACCACTAGGGA 59.959 60.000 0.00 0.00 41.15 4.20
8591 9919 1.617947 GCCTCACCTCACCACTAGGG 61.618 65.000 0.00 0.00 44.81 3.53
8592 9920 1.901085 GCCTCACCTCACCACTAGG 59.099 63.158 0.00 0.00 40.20 3.02
8593 9921 1.513158 CGCCTCACCTCACCACTAG 59.487 63.158 0.00 0.00 0.00 2.57
8594 9922 1.982395 CCGCCTCACCTCACCACTA 60.982 63.158 0.00 0.00 0.00 2.74
8595 9923 3.314331 CCGCCTCACCTCACCACT 61.314 66.667 0.00 0.00 0.00 4.00
8615 9943 3.434319 CATCACCACCGCAGCCAC 61.434 66.667 0.00 0.00 0.00 5.01
8616 9944 4.720902 CCATCACCACCGCAGCCA 62.721 66.667 0.00 0.00 0.00 4.75
8619 9947 2.821366 GAGCCATCACCACCGCAG 60.821 66.667 0.00 0.00 0.00 5.18
8620 9948 4.408821 GGAGCCATCACCACCGCA 62.409 66.667 0.00 0.00 0.00 5.69
8622 9950 4.838152 CCGGAGCCATCACCACCG 62.838 72.222 0.00 0.00 42.67 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.