Multiple sequence alignment - TraesCS2A01G480300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G480300 chr2A 100.000 3086 0 0 1 3086 718131420 718128335 0.000000e+00 5699.0
1 TraesCS2A01G480300 chr2A 79.104 670 101 19 13 661 738440257 738439606 2.840000e-115 425.0
2 TraesCS2A01G480300 chr2A 88.172 93 9 1 2499 2589 652899804 652899896 3.250000e-20 110.0
3 TraesCS2A01G480300 chr2A 96.970 33 1 0 2593 2625 741982173 741982141 4.300000e-04 56.5
4 TraesCS2A01G480300 chr2B 87.954 1129 76 29 1309 2395 699178947 699177837 0.000000e+00 1277.0
5 TraesCS2A01G480300 chr2B 87.435 581 44 16 748 1315 699179568 699179004 2.590000e-180 641.0
6 TraesCS2A01G480300 chr2B 82.435 575 47 31 2434 2972 699177758 699177202 1.300000e-123 453.0
7 TraesCS2A01G480300 chr2D 92.843 503 18 7 1897 2395 580240534 580240046 0.000000e+00 713.0
8 TraesCS2A01G480300 chr2D 86.712 444 36 13 1312 1732 580240994 580240551 3.600000e-129 472.0
9 TraesCS2A01G480300 chr2D 82.149 549 45 21 777 1315 580241722 580241217 3.680000e-114 422.0
10 TraesCS2A01G480300 chr5D 86.900 458 51 7 1 455 533861691 533861240 3.550000e-139 505.0
11 TraesCS2A01G480300 chr5D 80.870 115 9 7 2524 2625 539142668 539142554 9.170000e-11 78.7
12 TraesCS2A01G480300 chr5D 79.167 120 12 8 2524 2630 279311820 279311701 1.540000e-08 71.3
13 TraesCS2A01G480300 chr5D 91.111 45 4 0 2581 2625 446570658 446570614 9.240000e-06 62.1
14 TraesCS2A01G480300 chr1B 85.466 461 59 7 1 460 345419710 345419257 1.000000e-129 473.0
15 TraesCS2A01G480300 chr7B 84.567 473 65 7 1 469 196392665 196392197 2.170000e-126 462.0
16 TraesCS2A01G480300 chr6D 87.626 396 44 5 1 392 264691464 264691070 3.630000e-124 455.0
17 TraesCS2A01G480300 chr6D 89.474 95 8 1 2523 2617 274918259 274918167 5.410000e-23 119.0
18 TraesCS2A01G480300 chr6B 85.238 420 56 5 1 418 408700027 408699612 7.910000e-116 427.0
19 TraesCS2A01G480300 chr6B 83.738 412 57 6 45 455 255014718 255015120 6.240000e-102 381.0
20 TraesCS2A01G480300 chr3A 82.379 454 75 4 1 451 371291018 371291469 1.040000e-104 390.0
21 TraesCS2A01G480300 chr3A 92.000 75 6 0 2515 2589 151317947 151318021 4.210000e-19 106.0
22 TraesCS2A01G480300 chr3A 80.488 123 11 8 2519 2628 651627752 651627874 7.090000e-12 82.4
23 TraesCS2A01G480300 chr4B 83.413 416 57 7 1 415 529916429 529916833 2.910000e-100 375.0
24 TraesCS2A01G480300 chr1D 89.796 98 7 3 2523 2617 370339112 370339209 4.180000e-24 122.0
25 TraesCS2A01G480300 chr1D 91.892 74 4 2 2516 2589 409496441 409496370 5.440000e-18 102.0
26 TraesCS2A01G480300 chr1D 85.437 103 7 5 2519 2617 98824922 98825020 1.960000e-17 100.0
27 TraesCS2A01G480300 chr7A 79.310 174 34 2 457 629 11371885 11372057 1.500000e-23 121.0
28 TraesCS2A01G480300 chr4A 97.015 67 2 0 2523 2589 605668832 605668766 2.520000e-21 113.0
29 TraesCS2A01G480300 chr3D 95.522 67 3 0 2523 2589 463852401 463852335 1.170000e-19 108.0
30 TraesCS2A01G480300 chr5B 96.970 33 0 1 2593 2625 36481397 36481366 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G480300 chr2A 718128335 718131420 3085 True 5699.000000 5699 100.000000 1 3086 1 chr2A.!!$R1 3085
1 TraesCS2A01G480300 chr2A 738439606 738440257 651 True 425.000000 425 79.104000 13 661 1 chr2A.!!$R2 648
2 TraesCS2A01G480300 chr2B 699177202 699179568 2366 True 790.333333 1277 85.941333 748 2972 3 chr2B.!!$R1 2224
3 TraesCS2A01G480300 chr2D 580240046 580241722 1676 True 535.666667 713 87.234667 777 2395 3 chr2D.!!$R1 1618

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
296 299 0.034059 GGACTCGGCCATGGACTATG 59.966 60.0 18.4 7.92 36.5 2.23 F
718 737 0.038744 CTGGGGTCATTGTTCCTGCT 59.961 55.0 0.0 0.00 0.0 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1174 1209 0.034089 AAATTGGGCCGAGAGAAGGG 60.034 55.0 0.0 0.0 0.0 3.95 R
2602 2992 0.179081 GCACATACTCCCTCCGTTCC 60.179 60.0 0.0 0.0 0.0 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.814504 AGGAAAGGAGGAGCAAATGAA 57.185 42.857 0.00 0.00 0.00 2.57
74 75 1.558756 AGAAGCTTGACATGGAGGAGG 59.441 52.381 2.10 0.00 0.00 4.30
77 78 1.993653 CTTGACATGGAGGAGGCCA 59.006 57.895 5.01 0.00 43.23 5.36
107 109 1.107114 GAAGCTCGACATGGAGGAGA 58.893 55.000 12.41 0.00 34.56 3.71
108 110 1.686052 GAAGCTCGACATGGAGGAGAT 59.314 52.381 12.41 4.85 34.56 2.75
111 113 1.313772 CTCGACATGGAGGAGATCGT 58.686 55.000 0.00 0.00 34.47 3.73
132 134 1.660333 CCAAACAAAGAAGCTCGCGAC 60.660 52.381 3.71 2.10 0.00 5.19
156 159 1.580942 CCACCAATGCGACACCAAG 59.419 57.895 0.00 0.00 0.00 3.61
174 177 2.256461 GCAAAAGAGGTGGCGCTG 59.744 61.111 7.64 0.00 0.00 5.18
176 179 1.898574 CAAAAGAGGTGGCGCTGGT 60.899 57.895 7.64 0.00 0.00 4.00
179 182 0.605589 AAAGAGGTGGCGCTGGTAAC 60.606 55.000 7.64 0.00 0.00 2.50
187 190 2.813179 GCGCTGGTAACCATGAGCG 61.813 63.158 17.14 17.14 44.66 5.03
189 192 1.019278 CGCTGGTAACCATGAGCGTT 61.019 55.000 14.17 3.97 39.65 4.84
190 193 0.447801 GCTGGTAACCATGAGCGTTG 59.552 55.000 0.00 0.00 30.82 4.10
192 195 2.632377 CTGGTAACCATGAGCGTTGAT 58.368 47.619 0.00 0.00 30.82 2.57
193 196 2.352651 CTGGTAACCATGAGCGTTGATG 59.647 50.000 0.00 0.00 30.82 3.07
195 198 2.095853 GGTAACCATGAGCGTTGATGTG 59.904 50.000 0.00 0.00 0.00 3.21
229 232 2.731976 CCGAAGAGAAGAAGTTGGTTCG 59.268 50.000 0.00 0.00 40.49 3.95
230 233 3.552273 CCGAAGAGAAGAAGTTGGTTCGA 60.552 47.826 3.30 0.00 40.49 3.71
233 236 4.513198 AGAGAAGAAGTTGGTTCGAGAG 57.487 45.455 0.00 0.00 40.49 3.20
244 247 0.949105 GTTCGAGAGCCGGCAAAAGA 60.949 55.000 31.54 19.37 39.14 2.52
252 255 1.963515 AGCCGGCAAAAGAAGATGTTT 59.036 42.857 31.54 0.00 0.00 2.83
257 260 3.308530 GGCAAAAGAAGATGTTTGACCG 58.691 45.455 0.51 0.00 36.86 4.79
261 264 5.444122 CAAAAGAAGATGTTTGACCGAGAC 58.556 41.667 0.00 0.00 36.96 3.36
263 266 1.390463 GAAGATGTTTGACCGAGACGC 59.610 52.381 0.00 0.00 0.00 5.19
279 282 0.325296 ACGCCATGAACTAGGGAGGA 60.325 55.000 0.00 0.00 34.07 3.71
284 287 1.683917 CATGAACTAGGGAGGACTCGG 59.316 57.143 0.00 0.00 0.00 4.63
285 288 0.683504 TGAACTAGGGAGGACTCGGC 60.684 60.000 0.00 0.00 0.00 5.54
287 290 2.164332 AACTAGGGAGGACTCGGCCA 62.164 60.000 2.24 0.00 0.00 5.36
296 299 0.034059 GGACTCGGCCATGGACTATG 59.966 60.000 18.40 7.92 36.50 2.23
297 300 1.040646 GACTCGGCCATGGACTATGA 58.959 55.000 18.40 4.44 39.21 2.15
298 301 0.753262 ACTCGGCCATGGACTATGAC 59.247 55.000 18.40 0.00 39.21 3.06
301 304 1.598130 GGCCATGGACTATGACCGC 60.598 63.158 18.40 0.00 39.21 5.68
309 312 3.334691 TGGACTATGACCGCTCTTTTTG 58.665 45.455 0.00 0.00 0.00 2.44
312 315 4.093556 GGACTATGACCGCTCTTTTTGAAG 59.906 45.833 0.00 0.00 0.00 3.02
315 318 0.241213 GACCGCTCTTTTTGAAGGCC 59.759 55.000 0.00 0.00 0.00 5.19
323 326 1.611491 CTTTTTGAAGGCCGGCAAGTA 59.389 47.619 30.85 8.86 0.00 2.24
324 327 1.917872 TTTTGAAGGCCGGCAAGTAT 58.082 45.000 30.85 8.73 0.00 2.12
335 338 2.108157 CAAGTATGCCGGCCGCTA 59.892 61.111 26.77 11.33 38.78 4.26
348 351 1.209127 CCGCTAACTTTGTTGCCGG 59.791 57.895 0.00 0.00 0.00 6.13
349 352 1.442017 CGCTAACTTTGTTGCCGGC 60.442 57.895 22.73 22.73 0.00 6.13
352 355 0.165944 CTAACTTTGTTGCCGGCGAG 59.834 55.000 23.90 15.98 0.00 5.03
354 357 1.098712 AACTTTGTTGCCGGCGAGAA 61.099 50.000 21.82 21.82 0.00 2.87
361 364 1.791103 TTGCCGGCGAGAAAACTTGG 61.791 55.000 23.90 0.00 0.00 3.61
362 365 1.964373 GCCGGCGAGAAAACTTGGA 60.964 57.895 12.58 0.00 0.00 3.53
378 381 5.930837 ACTTGGAGGTTGTTCATTTTGAA 57.069 34.783 0.00 0.00 33.32 2.69
381 384 3.069443 TGGAGGTTGTTCATTTTGAAGGC 59.931 43.478 0.00 0.00 37.00 4.35
386 389 2.037901 TGTTCATTTTGAAGGCTGGCA 58.962 42.857 3.38 0.00 37.00 4.92
387 390 2.036217 TGTTCATTTTGAAGGCTGGCAG 59.964 45.455 10.94 10.94 37.00 4.85
402 405 3.390521 CAGGTGTGCCGGCCTCTA 61.391 66.667 26.77 0.59 40.50 2.43
404 407 3.075005 GGTGTGCCGGCCTCTAGA 61.075 66.667 26.77 0.00 0.00 2.43
412 415 1.017387 CCGGCCTCTAGATTTGTTGC 58.983 55.000 0.00 0.00 0.00 4.17
418 421 1.324736 CTCTAGATTTGTTGCCGACGC 59.675 52.381 0.00 0.00 0.00 5.19
440 443 2.939103 GGAAACTCGATGGGTTGATCAG 59.061 50.000 0.00 0.00 0.00 2.90
445 448 2.083774 TCGATGGGTTGATCAGTTTGC 58.916 47.619 0.00 0.00 0.00 3.68
449 452 0.244721 GGGTTGATCAGTTTGCAGGC 59.755 55.000 0.00 0.00 0.00 4.85
451 454 1.200948 GGTTGATCAGTTTGCAGGCTC 59.799 52.381 0.00 0.00 0.00 4.70
452 455 1.135859 GTTGATCAGTTTGCAGGCTCG 60.136 52.381 0.00 0.00 0.00 5.03
460 463 1.939934 GTTTGCAGGCTCGCATATGTA 59.060 47.619 11.43 0.00 42.62 2.29
463 466 1.344114 TGCAGGCTCGCATATGTATGA 59.656 47.619 4.29 0.00 36.86 2.15
469 472 0.676736 TCGCATATGTATGACGGCCA 59.323 50.000 2.24 0.00 35.75 5.36
470 473 0.790207 CGCATATGTATGACGGCCAC 59.210 55.000 2.24 0.00 35.75 5.01
475 490 5.919827 CATATGTATGACGGCCACTGGCA 62.920 52.174 21.87 0.00 42.48 4.92
485 500 2.089854 CCACTGGCATGAACTACGC 58.910 57.895 0.00 0.00 0.00 4.42
489 504 3.089784 GGCATGAACTACGCCGTG 58.910 61.111 0.00 0.00 35.79 4.94
513 531 8.134261 GTGGTGGTAAAATTTCATTTGCAAAAT 58.866 29.630 17.19 1.75 31.77 1.82
524 542 4.159321 TCATTTGCAAAATATTCCAGGCGA 59.841 37.500 17.19 0.00 0.00 5.54
531 549 2.083835 ATATTCCAGGCGACCGGACG 62.084 60.000 22.02 22.02 0.00 4.79
535 553 3.518998 CAGGCGACCGGACGAGAT 61.519 66.667 29.83 11.25 35.09 2.75
536 554 3.518998 AGGCGACCGGACGAGATG 61.519 66.667 29.83 0.60 35.09 2.90
537 555 3.823330 GGCGACCGGACGAGATGT 61.823 66.667 29.83 0.00 35.09 3.06
538 556 2.579787 GCGACCGGACGAGATGTG 60.580 66.667 29.83 0.00 35.09 3.21
539 557 2.875485 CGACCGGACGAGATGTGT 59.125 61.111 21.84 0.00 35.09 3.72
540 558 1.211969 CGACCGGACGAGATGTGTT 59.788 57.895 21.84 0.00 35.09 3.32
541 559 1.071019 CGACCGGACGAGATGTGTTG 61.071 60.000 21.84 0.00 35.09 3.33
542 560 0.736325 GACCGGACGAGATGTGTTGG 60.736 60.000 9.46 0.00 0.00 3.77
543 561 2.100631 CCGGACGAGATGTGTTGGC 61.101 63.158 0.00 0.00 0.00 4.52
544 562 2.444624 CGGACGAGATGTGTTGGCG 61.445 63.158 0.00 0.00 0.00 5.69
545 563 1.374252 GGACGAGATGTGTTGGCGT 60.374 57.895 0.00 0.00 37.97 5.68
546 564 1.626654 GGACGAGATGTGTTGGCGTG 61.627 60.000 0.00 0.00 35.09 5.34
549 567 1.269883 ACGAGATGTGTTGGCGTGTTA 60.270 47.619 0.00 0.00 33.52 2.41
551 569 1.732259 GAGATGTGTTGGCGTGTTAGG 59.268 52.381 0.00 0.00 0.00 2.69
592 611 3.378911 AAAAACGATTGGACGCCATTT 57.621 38.095 0.00 0.00 36.70 2.32
595 614 1.750193 ACGATTGGACGCCATTTCAT 58.250 45.000 0.00 0.00 36.70 2.57
603 622 3.214328 GGACGCCATTTCATTGTCCTAT 58.786 45.455 2.57 0.00 44.47 2.57
604 623 3.632145 GGACGCCATTTCATTGTCCTATT 59.368 43.478 2.57 0.00 44.47 1.73
609 628 6.127366 ACGCCATTTCATTGTCCTATTCAAAT 60.127 34.615 0.00 0.00 0.00 2.32
634 653 7.832550 TGGATAAAATTCAAACAAAACGAACG 58.167 30.769 0.00 0.00 0.00 3.95
648 667 1.325338 ACGAACGTTTTTGAGGTCGTG 59.675 47.619 7.76 0.00 36.65 4.35
661 680 1.164041 GGTCGTGTGTTGGAGTTGGG 61.164 60.000 0.00 0.00 0.00 4.12
662 681 0.179067 GTCGTGTGTTGGAGTTGGGA 60.179 55.000 0.00 0.00 0.00 4.37
663 682 0.179067 TCGTGTGTTGGAGTTGGGAC 60.179 55.000 0.00 0.00 0.00 4.46
664 683 1.495584 CGTGTGTTGGAGTTGGGACG 61.496 60.000 0.00 0.00 0.00 4.79
665 684 1.525077 TGTGTTGGAGTTGGGACGC 60.525 57.895 0.00 0.00 0.00 5.19
666 685 2.112297 TGTTGGAGTTGGGACGCC 59.888 61.111 0.00 0.00 45.04 5.68
667 686 2.671963 GTTGGAGTTGGGACGCCC 60.672 66.667 7.87 7.87 44.29 6.13
668 687 2.852075 TTGGAGTTGGGACGCCCT 60.852 61.111 14.76 0.00 45.70 5.19
669 688 2.457323 TTGGAGTTGGGACGCCCTT 61.457 57.895 14.76 2.60 45.70 3.95
670 689 2.002018 TTGGAGTTGGGACGCCCTTT 62.002 55.000 14.76 2.30 45.70 3.11
671 690 1.674651 GGAGTTGGGACGCCCTTTC 60.675 63.158 14.76 9.68 45.70 2.62
672 691 1.072505 GAGTTGGGACGCCCTTTCA 59.927 57.895 14.76 0.00 45.70 2.69
673 692 1.228154 AGTTGGGACGCCCTTTCAC 60.228 57.895 14.76 7.43 45.70 3.18
674 693 2.281208 TTGGGACGCCCTTTCACG 60.281 61.111 14.76 0.00 45.70 4.35
675 694 2.809307 TTGGGACGCCCTTTCACGA 61.809 57.895 14.76 0.00 45.70 4.35
676 695 2.119484 TTGGGACGCCCTTTCACGAT 62.119 55.000 14.76 0.00 45.70 3.73
677 696 1.814169 GGGACGCCCTTTCACGATC 60.814 63.158 7.58 0.00 41.34 3.69
678 697 1.218316 GGACGCCCTTTCACGATCT 59.782 57.895 0.00 0.00 0.00 2.75
679 698 1.084370 GGACGCCCTTTCACGATCTG 61.084 60.000 0.00 0.00 0.00 2.90
680 699 1.696832 GACGCCCTTTCACGATCTGC 61.697 60.000 0.00 0.00 0.00 4.26
702 721 5.533533 CGTAGCTGCTATACTAGTACTGG 57.466 47.826 13.20 4.89 0.00 4.00
703 722 4.392445 CGTAGCTGCTATACTAGTACTGGG 59.608 50.000 13.20 3.83 0.00 4.45
704 723 3.768878 AGCTGCTATACTAGTACTGGGG 58.231 50.000 11.30 1.35 0.00 4.96
705 724 3.140519 AGCTGCTATACTAGTACTGGGGT 59.859 47.826 11.30 7.12 0.00 4.95
706 725 3.506844 GCTGCTATACTAGTACTGGGGTC 59.493 52.174 11.30 0.00 0.00 4.46
707 726 4.726583 CTGCTATACTAGTACTGGGGTCA 58.273 47.826 11.30 0.91 0.00 4.02
708 727 5.326069 CTGCTATACTAGTACTGGGGTCAT 58.674 45.833 11.30 1.42 0.00 3.06
709 728 5.712752 TGCTATACTAGTACTGGGGTCATT 58.287 41.667 11.30 0.00 0.00 2.57
710 729 5.538813 TGCTATACTAGTACTGGGGTCATTG 59.461 44.000 11.30 1.49 0.00 2.82
711 730 5.539193 GCTATACTAGTACTGGGGTCATTGT 59.461 44.000 11.30 0.00 0.00 2.71
712 731 6.041751 GCTATACTAGTACTGGGGTCATTGTT 59.958 42.308 11.30 0.00 0.00 2.83
713 732 4.820894 ACTAGTACTGGGGTCATTGTTC 57.179 45.455 11.30 0.00 0.00 3.18
714 733 3.518303 ACTAGTACTGGGGTCATTGTTCC 59.482 47.826 11.30 0.00 0.00 3.62
715 734 2.632537 AGTACTGGGGTCATTGTTCCT 58.367 47.619 0.00 0.00 0.00 3.36
716 735 2.305927 AGTACTGGGGTCATTGTTCCTG 59.694 50.000 0.00 0.00 0.00 3.86
717 736 0.251341 ACTGGGGTCATTGTTCCTGC 60.251 55.000 0.00 0.00 0.00 4.85
718 737 0.038744 CTGGGGTCATTGTTCCTGCT 59.961 55.000 0.00 0.00 0.00 4.24
719 738 1.281867 CTGGGGTCATTGTTCCTGCTA 59.718 52.381 0.00 0.00 0.00 3.49
720 739 1.281867 TGGGGTCATTGTTCCTGCTAG 59.718 52.381 0.00 0.00 0.00 3.42
721 740 1.282157 GGGGTCATTGTTCCTGCTAGT 59.718 52.381 0.00 0.00 0.00 2.57
722 741 2.290960 GGGGTCATTGTTCCTGCTAGTT 60.291 50.000 0.00 0.00 0.00 2.24
723 742 2.749621 GGGTCATTGTTCCTGCTAGTTG 59.250 50.000 0.00 0.00 0.00 3.16
724 743 2.749621 GGTCATTGTTCCTGCTAGTTGG 59.250 50.000 0.00 0.00 0.00 3.77
725 744 3.412386 GTCATTGTTCCTGCTAGTTGGT 58.588 45.455 0.00 0.00 0.00 3.67
726 745 4.564821 GGTCATTGTTCCTGCTAGTTGGTA 60.565 45.833 0.00 0.00 0.00 3.25
727 746 4.631813 GTCATTGTTCCTGCTAGTTGGTAG 59.368 45.833 0.00 0.00 0.00 3.18
728 747 4.286032 TCATTGTTCCTGCTAGTTGGTAGT 59.714 41.667 0.00 0.00 0.00 2.73
729 748 5.482526 TCATTGTTCCTGCTAGTTGGTAGTA 59.517 40.000 0.00 0.00 0.00 1.82
730 749 5.811796 TTGTTCCTGCTAGTTGGTAGTAA 57.188 39.130 0.00 0.00 0.00 2.24
731 750 5.811796 TGTTCCTGCTAGTTGGTAGTAAA 57.188 39.130 0.00 0.00 0.00 2.01
732 751 6.177310 TGTTCCTGCTAGTTGGTAGTAAAA 57.823 37.500 0.00 0.00 0.00 1.52
733 752 5.993441 TGTTCCTGCTAGTTGGTAGTAAAAC 59.007 40.000 0.00 0.00 0.00 2.43
734 753 5.811796 TCCTGCTAGTTGGTAGTAAAACA 57.188 39.130 0.00 0.00 0.00 2.83
735 754 6.177310 TCCTGCTAGTTGGTAGTAAAACAA 57.823 37.500 0.00 0.00 0.00 2.83
736 755 6.593807 TCCTGCTAGTTGGTAGTAAAACAAA 58.406 36.000 0.00 0.00 0.00 2.83
737 756 7.228590 TCCTGCTAGTTGGTAGTAAAACAAAT 58.771 34.615 0.00 0.00 0.00 2.32
738 757 8.377034 TCCTGCTAGTTGGTAGTAAAACAAATA 58.623 33.333 0.00 0.00 0.00 1.40
739 758 8.665685 CCTGCTAGTTGGTAGTAAAACAAATAG 58.334 37.037 6.03 6.03 42.41 1.73
740 759 9.431887 CTGCTAGTTGGTAGTAAAACAAATAGA 57.568 33.333 12.85 0.52 42.23 1.98
741 760 9.431887 TGCTAGTTGGTAGTAAAACAAATAGAG 57.568 33.333 12.85 0.00 42.23 2.43
742 761 8.880750 GCTAGTTGGTAGTAAAACAAATAGAGG 58.119 37.037 12.85 0.00 42.23 3.69
743 762 7.683437 AGTTGGTAGTAAAACAAATAGAGGC 57.317 36.000 1.11 0.00 0.00 4.70
744 763 6.657966 AGTTGGTAGTAAAACAAATAGAGGCC 59.342 38.462 0.00 0.00 0.00 5.19
745 764 6.382919 TGGTAGTAAAACAAATAGAGGCCT 57.617 37.500 3.86 3.86 0.00 5.19
746 765 6.412214 TGGTAGTAAAACAAATAGAGGCCTC 58.588 40.000 26.22 26.22 0.00 4.70
766 785 6.918022 GGCCTCAAACAAATAAATATCGGAAG 59.082 38.462 0.00 0.00 0.00 3.46
826 845 1.623811 AGCCGCGGAATATAATCCTGT 59.376 47.619 33.48 0.00 37.34 4.00
827 846 1.732259 GCCGCGGAATATAATCCTGTG 59.268 52.381 33.48 5.52 37.34 3.66
828 847 1.732259 CCGCGGAATATAATCCTGTGC 59.268 52.381 24.07 0.85 37.34 4.57
829 848 1.390123 CGCGGAATATAATCCTGTGCG 59.610 52.381 11.54 11.54 39.34 5.34
830 849 1.128692 GCGGAATATAATCCTGTGCGC 59.871 52.381 0.00 0.00 37.34 6.09
862 881 1.526041 GCTTATCTGATGTGAGCGCAG 59.474 52.381 11.47 0.00 0.00 5.18
931 951 0.678366 TCTCTCTCGGGACAGACAGC 60.678 60.000 0.00 0.00 0.00 4.40
957 977 6.098679 TGTGATTTCCTTCTTGTTGTTGTTG 58.901 36.000 0.00 0.00 0.00 3.33
994 1026 4.896829 TAGAGGAGGGAGGCGGCG 62.897 72.222 0.51 0.51 0.00 6.46
1127 1159 4.619227 CACTGTGCGTCCCCGGTT 62.619 66.667 0.00 0.00 33.68 4.44
1128 1160 4.309950 ACTGTGCGTCCCCGGTTC 62.310 66.667 0.00 0.00 33.68 3.62
1129 1161 4.308458 CTGTGCGTCCCCGGTTCA 62.308 66.667 0.00 0.00 33.68 3.18
1132 1165 3.000819 TGCGTCCCCGGTTCATCT 61.001 61.111 0.00 0.00 33.68 2.90
1134 1167 1.376812 GCGTCCCCGGTTCATCTTT 60.377 57.895 0.00 0.00 33.68 2.52
1140 1173 0.912486 CCCGGTTCATCTTTCCTCCT 59.088 55.000 0.00 0.00 0.00 3.69
1143 1176 1.834263 CGGTTCATCTTTCCTCCTCCT 59.166 52.381 0.00 0.00 0.00 3.69
1144 1177 2.159028 CGGTTCATCTTTCCTCCTCCTC 60.159 54.545 0.00 0.00 0.00 3.71
1147 1180 3.039252 TCATCTTTCCTCCTCCTCCTC 57.961 52.381 0.00 0.00 0.00 3.71
1150 1183 1.289530 TCTTTCCTCCTCCTCCTCCTC 59.710 57.143 0.00 0.00 0.00 3.71
1163 1196 0.550147 CCTCCTCCTTCTTCCCCCAA 60.550 60.000 0.00 0.00 0.00 4.12
1169 1204 2.376855 CTCCTTCTTCCCCCAACTCTTT 59.623 50.000 0.00 0.00 0.00 2.52
1170 1205 2.108250 TCCTTCTTCCCCCAACTCTTTG 59.892 50.000 0.00 0.00 0.00 2.77
1171 1206 1.889170 CTTCTTCCCCCAACTCTTTGC 59.111 52.381 0.00 0.00 0.00 3.68
1172 1207 0.112412 TCTTCCCCCAACTCTTTGCC 59.888 55.000 0.00 0.00 0.00 4.52
1173 1208 1.228429 TTCCCCCAACTCTTTGCCG 60.228 57.895 0.00 0.00 0.00 5.69
1174 1209 3.373565 CCCCCAACTCTTTGCCGC 61.374 66.667 0.00 0.00 0.00 6.53
1175 1210 3.373565 CCCCAACTCTTTGCCGCC 61.374 66.667 0.00 0.00 0.00 6.13
1182 1217 1.298014 CTCTTTGCCGCCCTTCTCT 59.702 57.895 0.00 0.00 0.00 3.10
1183 1218 0.742635 CTCTTTGCCGCCCTTCTCTC 60.743 60.000 0.00 0.00 0.00 3.20
1195 1230 1.065126 CCTTCTCTCGGCCCAATTTCT 60.065 52.381 0.00 0.00 0.00 2.52
1200 1235 2.159382 TCTCGGCCCAATTTCTTGTTC 58.841 47.619 0.00 0.00 0.00 3.18
1203 1238 3.691575 TCGGCCCAATTTCTTGTTCATA 58.308 40.909 0.00 0.00 0.00 2.15
1207 1242 4.142160 GGCCCAATTTCTTGTTCATACTCC 60.142 45.833 0.00 0.00 0.00 3.85
1212 1247 6.072728 CCAATTTCTTGTTCATACTCCGTTCA 60.073 38.462 0.00 0.00 0.00 3.18
1219 1254 6.037786 TGTTCATACTCCGTTCAATTCTCT 57.962 37.500 0.00 0.00 0.00 3.10
1220 1255 5.869344 TGTTCATACTCCGTTCAATTCTCTG 59.131 40.000 0.00 0.00 0.00 3.35
1223 1258 2.966050 ACTCCGTTCAATTCTCTGAGC 58.034 47.619 0.00 0.00 0.00 4.26
1234 1269 1.103987 TCTCTGAGCCCGGATTCTCG 61.104 60.000 0.73 3.78 32.20 4.04
1243 1278 2.020836 CCGGATTCTCGGCGTTTTCG 62.021 60.000 6.85 5.06 43.71 3.46
1266 1301 0.597637 CGTGGATCCTCGAAATCCCG 60.598 60.000 27.93 17.31 41.78 5.14
1301 1336 4.757149 GGAGATCTTGCGGCATAATTAACT 59.243 41.667 2.28 0.00 0.00 2.24
1322 1583 0.523072 CCTTTGCGTGTTCCATCCTG 59.477 55.000 0.00 0.00 0.00 3.86
1335 1596 1.339824 CCATCCTGTTCTTCTGCTGCT 60.340 52.381 0.00 0.00 0.00 4.24
1336 1597 2.008329 CATCCTGTTCTTCTGCTGCTC 58.992 52.381 0.00 0.00 0.00 4.26
1338 1599 0.320247 CCTGTTCTTCTGCTGCTCGT 60.320 55.000 0.00 0.00 0.00 4.18
1339 1600 0.788995 CTGTTCTTCTGCTGCTCGTG 59.211 55.000 0.00 0.00 0.00 4.35
1342 1603 1.224069 TTCTTCTGCTGCTCGTGTGC 61.224 55.000 0.00 0.00 0.00 4.57
1351 1612 1.806542 CTGCTCGTGTGCCTTTTACAT 59.193 47.619 0.00 0.00 0.00 2.29
1353 1614 2.739913 TGCTCGTGTGCCTTTTACATAC 59.260 45.455 0.00 0.00 0.00 2.39
1355 1616 3.181520 GCTCGTGTGCCTTTTACATACAG 60.182 47.826 0.00 0.00 0.00 2.74
1360 1626 5.623673 CGTGTGCCTTTTACATACAGAAAAC 59.376 40.000 0.00 0.00 0.00 2.43
1364 1630 8.035394 TGTGCCTTTTACATACAGAAAACAAAA 58.965 29.630 0.00 0.00 0.00 2.44
1387 1653 6.555463 AAATCCTGCAAATTGATGAGGAAT 57.445 33.333 11.24 3.02 36.42 3.01
1395 1667 2.076207 TTGATGAGGAATGCATGGGG 57.924 50.000 0.00 0.00 0.00 4.96
1398 1670 0.263765 ATGAGGAATGCATGGGGCTT 59.736 50.000 0.00 0.00 45.15 4.35
1416 1692 4.035675 GGGCTTATGATTACTGTGTTCTGC 59.964 45.833 0.00 0.00 0.00 4.26
1429 1705 2.035066 GTGTTCTGCACTCAAATTGCCT 59.965 45.455 0.00 0.00 44.41 4.75
1432 1708 3.648339 TCTGCACTCAAATTGCCTTTC 57.352 42.857 0.00 0.00 39.39 2.62
1436 1712 4.768583 TGCACTCAAATTGCCTTTCTTTT 58.231 34.783 0.00 0.00 39.39 2.27
1438 1714 5.752955 TGCACTCAAATTGCCTTTCTTTTAC 59.247 36.000 0.00 0.00 39.39 2.01
1441 1717 7.136119 CACTCAAATTGCCTTTCTTTTACGTA 58.864 34.615 0.00 0.00 0.00 3.57
1447 1723 8.611654 AATTGCCTTTCTTTTACGTAGACTTA 57.388 30.769 0.00 0.00 0.00 2.24
1450 1726 8.436046 TGCCTTTCTTTTACGTAGACTTAAAA 57.564 30.769 0.00 4.60 31.60 1.52
1455 1731 7.951530 TCTTTTACGTAGACTTAAAAGGTGG 57.048 36.000 21.65 6.73 42.76 4.61
1493 1773 2.562912 CATGTTGTGCAGGTCGCC 59.437 61.111 0.00 0.00 41.33 5.54
1626 1910 3.053991 TGTCCCGGTAACCAATCATTCAT 60.054 43.478 0.00 0.00 0.00 2.57
1627 1911 3.951680 GTCCCGGTAACCAATCATTCATT 59.048 43.478 0.00 0.00 0.00 2.57
1628 1912 4.036380 GTCCCGGTAACCAATCATTCATTC 59.964 45.833 0.00 0.00 0.00 2.67
1629 1913 3.951037 CCCGGTAACCAATCATTCATTCA 59.049 43.478 0.00 0.00 0.00 2.57
1647 1931 8.940397 TTCATTCATTCCCCTAATTATTCTCC 57.060 34.615 0.00 0.00 0.00 3.71
1672 1956 8.960591 CCCCTCATGGCTTATTATTGTTTATAG 58.039 37.037 0.00 0.00 0.00 1.31
1673 1957 9.520515 CCCTCATGGCTTATTATTGTTTATAGT 57.479 33.333 0.00 0.00 0.00 2.12
1721 2014 9.487790 AAGATTTAGACTCAACTTTCTTCAGAG 57.512 33.333 0.00 0.00 0.00 3.35
1749 2043 3.609798 GGGGCTACCTACTCACTCA 57.390 57.895 0.00 0.00 36.80 3.41
1775 2069 7.359262 TCAAATGATAAATTGACTCGACGTT 57.641 32.000 0.00 0.00 30.94 3.99
1818 2112 0.874390 TGGCATGCTCGTTTCTCAAC 59.126 50.000 18.92 0.00 0.00 3.18
1832 2126 7.981142 TCGTTTCTCAACAAACAAGAATTACT 58.019 30.769 0.00 0.00 36.23 2.24
1835 2129 9.226345 GTTTCTCAACAAACAAGAATTACTCAG 57.774 33.333 0.00 0.00 36.44 3.35
1836 2130 6.959361 TCTCAACAAACAAGAATTACTCAGC 58.041 36.000 0.00 0.00 0.00 4.26
1843 2137 8.345565 ACAAACAAGAATTACTCAGCTTTGTAG 58.654 33.333 0.00 0.00 29.76 2.74
1847 2141 8.585881 ACAAGAATTACTCAGCTTTGTAGTCTA 58.414 33.333 0.00 0.00 0.00 2.59
1852 2146 9.593134 AATTACTCAGCTTTGTAGTCTATTCTG 57.407 33.333 0.00 0.00 0.00 3.02
1859 2153 6.314896 AGCTTTGTAGTCTATTCTGAACATGC 59.685 38.462 0.00 0.00 0.00 4.06
1873 2167 0.541863 ACATGCGGCCTAGTTAAGCT 59.458 50.000 0.00 0.00 0.00 3.74
1874 2168 1.760613 ACATGCGGCCTAGTTAAGCTA 59.239 47.619 0.00 0.00 0.00 3.32
1878 2172 2.698797 TGCGGCCTAGTTAAGCTAAGAT 59.301 45.455 0.00 0.00 0.00 2.40
1883 2177 4.273724 GGCCTAGTTAAGCTAAGATGCAAC 59.726 45.833 0.00 0.00 34.99 4.17
1886 2180 5.232414 CCTAGTTAAGCTAAGATGCAACGAC 59.768 44.000 0.00 0.00 34.99 4.34
1887 2181 3.612860 AGTTAAGCTAAGATGCAACGACG 59.387 43.478 0.00 0.00 34.99 5.12
1986 2289 1.067776 GTGGTGAAGAAGATCGTCGGT 60.068 52.381 2.87 0.00 0.00 4.69
1993 2296 1.359459 GAAGATCGTCGGTGCCAACC 61.359 60.000 0.00 0.00 43.76 3.77
2052 2355 3.921767 TTCGCTCGGCTCTGCTGTG 62.922 63.158 0.00 0.00 36.18 3.66
2086 2389 6.986817 CCCTGACATAGTCATCGAAAAATAGT 59.013 38.462 0.00 0.00 41.94 2.12
2126 2430 1.803519 CTCCGAGTGCTGTTCGCTC 60.804 63.158 0.00 0.00 46.25 5.03
2183 2493 8.035984 TGAATCTTATCTGATCTGATCTGATGC 58.964 37.037 32.81 18.15 44.42 3.91
2252 2565 6.072119 GCTACTGGCTAAGGTTAATTGTTGTT 60.072 38.462 0.00 0.00 38.06 2.83
2275 2588 5.099575 TGATTAGTAGTACATGCGTGTGTG 58.900 41.667 21.92 0.00 39.39 3.82
2315 2629 6.683974 AAATATGATGGTTCAGTGTACTGC 57.316 37.500 7.14 0.00 43.46 4.40
2316 2630 2.078849 TGATGGTTCAGTGTACTGCG 57.921 50.000 7.14 0.00 43.46 5.18
2345 2659 3.128852 TGCCCGTTAATACAGTTGTGT 57.871 42.857 0.00 0.00 41.06 3.72
2346 2660 2.809119 TGCCCGTTAATACAGTTGTGTG 59.191 45.455 0.00 0.00 37.52 3.82
2395 2718 2.579410 TCTTTGCTCCCCTTGTTACC 57.421 50.000 0.00 0.00 0.00 2.85
2396 2719 1.777878 TCTTTGCTCCCCTTGTTACCA 59.222 47.619 0.00 0.00 0.00 3.25
2402 2725 0.690762 TCCCCTTGTTACCAGTGAGC 59.309 55.000 0.00 0.00 0.00 4.26
2408 2731 3.583806 CTTGTTACCAGTGAGCTGAGAG 58.416 50.000 0.00 0.00 45.28 3.20
2411 2734 3.005897 TGTTACCAGTGAGCTGAGAGTTC 59.994 47.826 0.00 0.00 45.28 3.01
2428 2751 5.622346 GAGTTCTCTCTGGGGTGATATTT 57.378 43.478 0.00 0.00 37.68 1.40
2429 2752 5.363939 GAGTTCTCTCTGGGGTGATATTTG 58.636 45.833 0.00 0.00 37.68 2.32
2430 2753 3.845781 TCTCTCTGGGGTGATATTTGC 57.154 47.619 0.00 0.00 0.00 3.68
2431 2754 2.103094 TCTCTCTGGGGTGATATTTGCG 59.897 50.000 0.00 0.00 0.00 4.85
2432 2755 1.140852 TCTCTGGGGTGATATTTGCGG 59.859 52.381 0.00 0.00 0.00 5.69
2462 2819 3.766068 AGTGCAGATACCCAGATGATG 57.234 47.619 0.00 0.00 0.00 3.07
2535 2892 2.226962 TGTTAGCTACTCCCTCCGTT 57.773 50.000 0.00 0.00 0.00 4.44
2536 2893 2.532843 TGTTAGCTACTCCCTCCGTTT 58.467 47.619 0.00 0.00 0.00 3.60
2537 2894 2.901839 TGTTAGCTACTCCCTCCGTTTT 59.098 45.455 0.00 0.00 0.00 2.43
2541 2898 2.572104 AGCTACTCCCTCCGTTTTGAAT 59.428 45.455 0.00 0.00 0.00 2.57
2548 2905 3.504520 TCCCTCCGTTTTGAATTACTTGC 59.495 43.478 0.00 0.00 0.00 4.01
2551 2908 4.226761 CTCCGTTTTGAATTACTTGCCAC 58.773 43.478 0.00 0.00 0.00 5.01
2552 2909 3.632604 TCCGTTTTGAATTACTTGCCACA 59.367 39.130 0.00 0.00 0.00 4.17
2553 2910 3.980775 CCGTTTTGAATTACTTGCCACAG 59.019 43.478 0.00 0.00 0.00 3.66
2554 2911 3.980775 CGTTTTGAATTACTTGCCACAGG 59.019 43.478 0.00 0.00 0.00 4.00
2555 2912 4.499019 CGTTTTGAATTACTTGCCACAGGT 60.499 41.667 0.00 0.00 0.00 4.00
2593 2960 8.073355 AGATGTATTTTAGTTTTAGATCGGCG 57.927 34.615 0.00 0.00 0.00 6.46
2594 2961 7.924412 AGATGTATTTTAGTTTTAGATCGGCGA 59.076 33.333 13.87 13.87 0.00 5.54
2595 2962 7.459394 TGTATTTTAGTTTTAGATCGGCGAG 57.541 36.000 17.22 0.00 0.00 5.03
2598 2988 9.023967 GTATTTTAGTTTTAGATCGGCGAGTAA 57.976 33.333 17.22 12.78 0.00 2.24
2602 2992 6.345920 AGTTTTAGATCGGCGAGTAATTTG 57.654 37.500 17.22 0.00 0.00 2.32
2604 2994 4.659111 TTAGATCGGCGAGTAATTTGGA 57.341 40.909 17.22 0.00 0.00 3.53
2617 3007 4.720273 AGTAATTTGGAACGGAGGGAGTAT 59.280 41.667 0.00 0.00 0.00 2.12
2621 3011 0.179081 GGAACGGAGGGAGTATGTGC 60.179 60.000 0.00 0.00 0.00 4.57
2622 3012 0.179081 GAACGGAGGGAGTATGTGCC 60.179 60.000 0.00 0.00 36.73 5.01
2623 3013 0.907704 AACGGAGGGAGTATGTGCCA 60.908 55.000 0.00 0.00 39.84 4.92
2624 3014 0.907704 ACGGAGGGAGTATGTGCCAA 60.908 55.000 0.00 0.00 39.84 4.52
2625 3015 0.469917 CGGAGGGAGTATGTGCCAAT 59.530 55.000 0.00 0.00 39.84 3.16
2626 3016 1.811558 CGGAGGGAGTATGTGCCAATG 60.812 57.143 0.00 0.00 39.84 2.82
2628 3018 2.292267 GAGGGAGTATGTGCCAATGTG 58.708 52.381 0.00 0.00 39.84 3.21
2632 3022 1.745087 GAGTATGTGCCAATGTGGGTG 59.255 52.381 0.00 0.00 38.19 4.61
2633 3023 0.817013 GTATGTGCCAATGTGGGTGG 59.183 55.000 0.00 0.00 38.19 4.61
2634 3024 0.324183 TATGTGCCAATGTGGGTGGG 60.324 55.000 0.00 0.00 38.19 4.61
2635 3025 2.203625 GTGCCAATGTGGGTGGGT 60.204 61.111 0.00 0.00 38.19 4.51
2636 3026 1.075836 GTGCCAATGTGGGTGGGTA 59.924 57.895 0.00 0.00 38.19 3.69
2637 3027 0.965363 GTGCCAATGTGGGTGGGTAG 60.965 60.000 0.00 0.00 38.19 3.18
2638 3028 1.379843 GCCAATGTGGGTGGGTAGG 60.380 63.158 0.00 0.00 38.19 3.18
2639 3029 2.083715 CCAATGTGGGTGGGTAGGT 58.916 57.895 0.00 0.00 32.67 3.08
2640 3030 1.291109 CCAATGTGGGTGGGTAGGTA 58.709 55.000 0.00 0.00 32.67 3.08
2658 3048 7.094720 GGGTAGGTAGGATCATATTATCGATCG 60.095 44.444 9.36 9.36 39.16 3.69
2659 3049 7.660617 GGTAGGTAGGATCATATTATCGATCGA 59.339 40.741 21.86 21.86 39.16 3.59
2660 3050 9.221933 GTAGGTAGGATCATATTATCGATCGAT 57.778 37.037 31.39 31.39 39.16 3.59
2661 3051 8.330466 AGGTAGGATCATATTATCGATCGATC 57.670 38.462 32.50 17.04 39.16 3.69
2676 3066 1.887854 TCGATCTCGGTGTTGGTACAA 59.112 47.619 0.00 0.00 41.74 2.41
2728 3121 1.804372 GCGACTGAATCAGTAGGCAGG 60.804 57.143 24.77 10.28 45.44 4.85
2729 3122 1.804372 CGACTGAATCAGTAGGCAGGC 60.804 57.143 16.71 0.92 45.44 4.85
2730 3123 1.208052 GACTGAATCAGTAGGCAGGCA 59.792 52.381 16.71 0.00 45.44 4.75
2731 3124 1.209019 ACTGAATCAGTAGGCAGGCAG 59.791 52.381 15.09 0.00 43.46 4.85
2740 3133 1.635817 TAGGCAGGCAGATTCCCACC 61.636 60.000 0.00 0.00 0.00 4.61
2746 3139 1.002624 GCAGATTCCCACCGAACCA 60.003 57.895 0.00 0.00 31.79 3.67
2775 3168 4.508861 CCTTGGAATGAACAAAACTGCAAG 59.491 41.667 0.00 0.00 42.29 4.01
2779 3172 2.582728 TGAACAAAACTGCAAGCCTG 57.417 45.000 0.00 0.00 37.60 4.85
2823 3216 0.743688 CCAGATCTCCAGACCAGACG 59.256 60.000 0.00 0.00 0.00 4.18
2834 3227 0.737715 GACCAGACGAGCCACATGTC 60.738 60.000 0.00 0.00 0.00 3.06
2871 3264 2.437200 GCAGCCTGCAGATACTCTAG 57.563 55.000 17.39 0.00 44.26 2.43
2872 3265 1.686052 GCAGCCTGCAGATACTCTAGT 59.314 52.381 17.39 0.00 44.26 2.57
2873 3266 2.887783 GCAGCCTGCAGATACTCTAGTA 59.112 50.000 17.39 0.00 44.26 1.82
2874 3267 3.305064 GCAGCCTGCAGATACTCTAGTAC 60.305 52.174 17.39 0.00 44.26 2.73
2875 3268 4.141287 CAGCCTGCAGATACTCTAGTACT 58.859 47.826 17.39 0.00 32.72 2.73
2876 3269 5.309638 CAGCCTGCAGATACTCTAGTACTA 58.690 45.833 17.39 1.89 32.72 1.82
2877 3270 5.943416 CAGCCTGCAGATACTCTAGTACTAT 59.057 44.000 17.39 0.00 32.72 2.12
2878 3271 6.093495 CAGCCTGCAGATACTCTAGTACTATC 59.907 46.154 17.39 0.00 32.72 2.08
2879 3272 5.941058 GCCTGCAGATACTCTAGTACTATCA 59.059 44.000 17.39 0.00 32.72 2.15
2880 3273 6.601613 GCCTGCAGATACTCTAGTACTATCAT 59.398 42.308 17.39 0.00 32.72 2.45
2896 3289 6.775594 ACTATCATTCCAAAGTAAAAGGGC 57.224 37.500 0.00 0.00 0.00 5.19
2897 3290 6.494059 ACTATCATTCCAAAGTAAAAGGGCT 58.506 36.000 0.00 0.00 0.00 5.19
2898 3291 6.954102 ACTATCATTCCAAAGTAAAAGGGCTT 59.046 34.615 0.00 0.00 0.00 4.35
2900 3293 7.978099 ATCATTCCAAAGTAAAAGGGCTTAT 57.022 32.000 0.00 0.00 0.00 1.73
2903 3296 9.487442 TCATTCCAAAGTAAAAGGGCTTATATT 57.513 29.630 0.00 0.00 0.00 1.28
2938 3331 8.213679 CCAAAAGAGGATACATTATTGGAGAGA 58.786 37.037 0.00 0.00 38.64 3.10
2939 3332 9.050601 CAAAAGAGGATACATTATTGGAGAGAC 57.949 37.037 0.00 0.00 41.41 3.36
2940 3333 8.560124 AAAGAGGATACATTATTGGAGAGACT 57.440 34.615 0.00 0.00 41.41 3.24
2972 3366 1.578583 GGTACACACCACACAGTGAC 58.421 55.000 7.81 0.00 45.04 3.67
2973 3367 1.205657 GTACACACCACACAGTGACG 58.794 55.000 7.81 0.00 40.34 4.35
2974 3368 0.103390 TACACACCACACAGTGACGG 59.897 55.000 7.81 9.80 40.34 4.79
2975 3369 1.153449 CACACCACACAGTGACGGT 60.153 57.895 7.81 10.48 40.34 4.83
2976 3370 1.153449 ACACCACACAGTGACGGTG 60.153 57.895 29.90 29.90 44.30 4.94
2978 3372 1.143183 ACCACACAGTGACGGTGTC 59.857 57.895 18.26 0.00 45.89 3.67
2979 3373 1.594293 CCACACAGTGACGGTGTCC 60.594 63.158 18.26 0.00 45.89 4.02
2980 3374 1.441729 CACACAGTGACGGTGTCCT 59.558 57.895 18.26 0.00 45.89 3.85
2981 3375 0.597637 CACACAGTGACGGTGTCCTC 60.598 60.000 18.26 0.00 45.89 3.71
2982 3376 1.040893 ACACAGTGACGGTGTCCTCA 61.041 55.000 15.57 0.00 45.89 3.86
2983 3377 0.319040 CACAGTGACGGTGTCCTCAG 60.319 60.000 7.71 0.00 0.00 3.35
2984 3378 1.373497 CAGTGACGGTGTCCTCAGC 60.373 63.158 0.00 0.00 38.52 4.26
2985 3379 1.832608 AGTGACGGTGTCCTCAGCA 60.833 57.895 0.00 0.00 41.52 4.41
2986 3380 1.188219 AGTGACGGTGTCCTCAGCAT 61.188 55.000 0.00 0.00 41.52 3.79
2987 3381 0.737715 GTGACGGTGTCCTCAGCATC 60.738 60.000 0.00 0.00 41.52 3.91
2988 3382 1.517257 GACGGTGTCCTCAGCATCG 60.517 63.158 0.00 0.00 44.98 3.84
2989 3383 1.934220 GACGGTGTCCTCAGCATCGA 61.934 60.000 4.95 0.00 42.44 3.59
2990 3384 1.323271 ACGGTGTCCTCAGCATCGAT 61.323 55.000 4.95 0.00 42.44 3.59
2991 3385 0.668535 CGGTGTCCTCAGCATCGATA 59.331 55.000 0.00 0.00 42.44 2.92
2992 3386 1.067060 CGGTGTCCTCAGCATCGATAA 59.933 52.381 0.00 0.00 42.44 1.75
2993 3387 2.474816 GGTGTCCTCAGCATCGATAAC 58.525 52.381 0.00 0.00 41.16 1.89
2994 3388 2.101582 GGTGTCCTCAGCATCGATAACT 59.898 50.000 0.00 0.00 41.16 2.24
2995 3389 3.376540 GTGTCCTCAGCATCGATAACTC 58.623 50.000 0.00 0.00 0.00 3.01
2996 3390 3.067461 GTGTCCTCAGCATCGATAACTCT 59.933 47.826 0.00 0.00 0.00 3.24
2997 3391 3.316588 TGTCCTCAGCATCGATAACTCTC 59.683 47.826 0.00 0.00 0.00 3.20
2998 3392 3.568007 GTCCTCAGCATCGATAACTCTCT 59.432 47.826 0.00 0.00 0.00 3.10
2999 3393 4.037446 GTCCTCAGCATCGATAACTCTCTT 59.963 45.833 0.00 0.00 0.00 2.85
3000 3394 4.037327 TCCTCAGCATCGATAACTCTCTTG 59.963 45.833 0.00 0.00 0.00 3.02
3001 3395 3.711086 TCAGCATCGATAACTCTCTTGC 58.289 45.455 0.00 0.00 0.00 4.01
3002 3396 2.799412 CAGCATCGATAACTCTCTTGCC 59.201 50.000 0.00 0.00 0.00 4.52
3003 3397 1.789464 GCATCGATAACTCTCTTGCCG 59.211 52.381 0.00 0.00 0.00 5.69
3004 3398 2.799917 GCATCGATAACTCTCTTGCCGT 60.800 50.000 0.00 0.00 0.00 5.68
3005 3399 2.561733 TCGATAACTCTCTTGCCGTG 57.438 50.000 0.00 0.00 0.00 4.94
3006 3400 0.924090 CGATAACTCTCTTGCCGTGC 59.076 55.000 0.00 0.00 0.00 5.34
3007 3401 1.291132 GATAACTCTCTTGCCGTGCC 58.709 55.000 0.00 0.00 0.00 5.01
3008 3402 0.905357 ATAACTCTCTTGCCGTGCCT 59.095 50.000 0.00 0.00 0.00 4.75
3009 3403 1.552578 TAACTCTCTTGCCGTGCCTA 58.447 50.000 0.00 0.00 0.00 3.93
3010 3404 0.037232 AACTCTCTTGCCGTGCCTAC 60.037 55.000 0.00 0.00 0.00 3.18
3011 3405 0.900647 ACTCTCTTGCCGTGCCTACT 60.901 55.000 0.00 0.00 0.00 2.57
3012 3406 0.459237 CTCTCTTGCCGTGCCTACTG 60.459 60.000 0.00 0.00 0.00 2.74
3013 3407 1.448540 CTCTTGCCGTGCCTACTGG 60.449 63.158 0.00 0.00 0.00 4.00
3025 3419 0.683973 CCTACTGGCTAGCCATCAGG 59.316 60.000 33.28 33.28 46.15 3.86
3039 3433 4.082665 CCATCAGGCAATCATCAGTAGT 57.917 45.455 0.00 0.00 0.00 2.73
3040 3434 5.219343 CCATCAGGCAATCATCAGTAGTA 57.781 43.478 0.00 0.00 0.00 1.82
3041 3435 5.236282 CCATCAGGCAATCATCAGTAGTAG 58.764 45.833 0.00 0.00 0.00 2.57
3042 3436 4.944619 TCAGGCAATCATCAGTAGTAGG 57.055 45.455 0.00 0.00 0.00 3.18
3043 3437 4.546674 TCAGGCAATCATCAGTAGTAGGA 58.453 43.478 0.00 0.00 0.00 2.94
3044 3438 4.586421 TCAGGCAATCATCAGTAGTAGGAG 59.414 45.833 0.00 0.00 0.00 3.69
3045 3439 4.343526 CAGGCAATCATCAGTAGTAGGAGT 59.656 45.833 0.00 0.00 0.00 3.85
3046 3440 4.343526 AGGCAATCATCAGTAGTAGGAGTG 59.656 45.833 0.00 0.00 0.00 3.51
3047 3441 4.502259 GGCAATCATCAGTAGTAGGAGTGG 60.502 50.000 0.00 0.00 0.00 4.00
3048 3442 4.100189 GCAATCATCAGTAGTAGGAGTGGT 59.900 45.833 0.00 0.00 0.00 4.16
3049 3443 5.737635 GCAATCATCAGTAGTAGGAGTGGTC 60.738 48.000 0.00 0.00 0.00 4.02
3050 3444 3.542648 TCATCAGTAGTAGGAGTGGTCG 58.457 50.000 0.00 0.00 0.00 4.79
3051 3445 2.414994 TCAGTAGTAGGAGTGGTCGG 57.585 55.000 0.00 0.00 0.00 4.79
3052 3446 0.739561 CAGTAGTAGGAGTGGTCGGC 59.260 60.000 0.00 0.00 0.00 5.54
3053 3447 0.330604 AGTAGTAGGAGTGGTCGGCA 59.669 55.000 0.00 0.00 0.00 5.69
3054 3448 1.180029 GTAGTAGGAGTGGTCGGCAA 58.820 55.000 0.00 0.00 0.00 4.52
3055 3449 1.547372 GTAGTAGGAGTGGTCGGCAAA 59.453 52.381 0.00 0.00 0.00 3.68
3056 3450 0.320697 AGTAGGAGTGGTCGGCAAAC 59.679 55.000 0.00 0.00 0.00 2.93
3057 3451 0.320697 GTAGGAGTGGTCGGCAAACT 59.679 55.000 0.00 0.00 0.00 2.66
3058 3452 0.606604 TAGGAGTGGTCGGCAAACTC 59.393 55.000 12.33 12.33 39.70 3.01
3059 3453 2.027625 GGAGTGGTCGGCAAACTCG 61.028 63.158 13.83 0.00 41.03 4.18
3060 3454 1.300697 GAGTGGTCGGCAAACTCGT 60.301 57.895 6.37 0.00 31.75 4.18
3061 3455 1.557443 GAGTGGTCGGCAAACTCGTG 61.557 60.000 6.37 0.00 31.75 4.35
3062 3456 1.885850 GTGGTCGGCAAACTCGTGT 60.886 57.895 0.00 0.00 0.00 4.49
3063 3457 1.593209 TGGTCGGCAAACTCGTGTC 60.593 57.895 0.00 0.00 0.00 3.67
3064 3458 1.593209 GGTCGGCAAACTCGTGTCA 60.593 57.895 0.00 0.00 0.00 3.58
3065 3459 1.557443 GGTCGGCAAACTCGTGTCAG 61.557 60.000 0.00 0.00 0.00 3.51
3066 3460 0.874607 GTCGGCAAACTCGTGTCAGT 60.875 55.000 0.00 0.00 0.00 3.41
3067 3461 0.179094 TCGGCAAACTCGTGTCAGTT 60.179 50.000 0.00 0.00 38.30 3.16
3068 3462 0.042188 CGGCAAACTCGTGTCAGTTG 60.042 55.000 0.00 0.00 36.69 3.16
3069 3463 0.317020 GGCAAACTCGTGTCAGTTGC 60.317 55.000 14.16 14.16 36.69 4.17
3070 3464 0.317020 GCAAACTCGTGTCAGTTGCC 60.317 55.000 12.30 0.00 36.69 4.52
3071 3465 1.299541 CAAACTCGTGTCAGTTGCCT 58.700 50.000 0.00 0.00 36.69 4.75
3072 3466 2.479837 CAAACTCGTGTCAGTTGCCTA 58.520 47.619 0.00 0.00 36.69 3.93
3073 3467 2.150397 AACTCGTGTCAGTTGCCTAC 57.850 50.000 0.00 0.00 35.18 3.18
3074 3468 0.317479 ACTCGTGTCAGTTGCCTACC 59.683 55.000 0.00 0.00 0.00 3.18
3075 3469 0.389948 CTCGTGTCAGTTGCCTACCC 60.390 60.000 0.00 0.00 0.00 3.69
3076 3470 0.830444 TCGTGTCAGTTGCCTACCCT 60.830 55.000 0.00 0.00 0.00 4.34
3077 3471 0.892755 CGTGTCAGTTGCCTACCCTA 59.107 55.000 0.00 0.00 0.00 3.53
3078 3472 1.403780 CGTGTCAGTTGCCTACCCTAC 60.404 57.143 0.00 0.00 0.00 3.18
3079 3473 1.900486 GTGTCAGTTGCCTACCCTACT 59.100 52.381 0.00 0.00 0.00 2.57
3080 3474 1.899814 TGTCAGTTGCCTACCCTACTG 59.100 52.381 0.00 0.00 39.07 2.74
3081 3475 2.176889 GTCAGTTGCCTACCCTACTGA 58.823 52.381 0.00 0.00 42.42 3.41
3082 3476 2.766828 GTCAGTTGCCTACCCTACTGAT 59.233 50.000 7.01 0.00 44.82 2.90
3083 3477 3.197983 GTCAGTTGCCTACCCTACTGATT 59.802 47.826 7.01 0.00 44.82 2.57
3084 3478 4.404715 GTCAGTTGCCTACCCTACTGATTA 59.595 45.833 7.01 0.00 44.82 1.75
3085 3479 4.404715 TCAGTTGCCTACCCTACTGATTAC 59.595 45.833 0.00 0.00 40.75 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.002087 TCCTCCTTTCCTTGTCGCTTC 59.998 52.381 0.00 0.00 0.00 3.86
1 2 1.002544 CTCCTCCTTTCCTTGTCGCTT 59.997 52.381 0.00 0.00 0.00 4.68
2 3 0.610687 CTCCTCCTTTCCTTGTCGCT 59.389 55.000 0.00 0.00 0.00 4.93
3 4 1.021920 GCTCCTCCTTTCCTTGTCGC 61.022 60.000 0.00 0.00 0.00 5.19
4 5 0.321671 TGCTCCTCCTTTCCTTGTCG 59.678 55.000 0.00 0.00 0.00 4.35
5 6 2.568623 TTGCTCCTCCTTTCCTTGTC 57.431 50.000 0.00 0.00 0.00 3.18
6 7 3.160269 CATTTGCTCCTCCTTTCCTTGT 58.840 45.455 0.00 0.00 0.00 3.16
7 8 3.424703 TCATTTGCTCCTCCTTTCCTTG 58.575 45.455 0.00 0.00 0.00 3.61
8 9 3.814504 TCATTTGCTCCTCCTTTCCTT 57.185 42.857 0.00 0.00 0.00 3.36
9 10 3.814504 TTCATTTGCTCCTCCTTTCCT 57.185 42.857 0.00 0.00 0.00 3.36
10 11 4.082125 TCTTTCATTTGCTCCTCCTTTCC 58.918 43.478 0.00 0.00 0.00 3.13
11 12 5.911378 ATCTTTCATTTGCTCCTCCTTTC 57.089 39.130 0.00 0.00 0.00 2.62
17 18 7.577303 TCCAAGTATATCTTTCATTTGCTCCT 58.423 34.615 0.00 0.00 33.63 3.69
74 75 1.377856 GCTTCCTCCTCTTGGTGGC 60.378 63.158 0.00 0.00 44.47 5.01
77 78 0.251832 TCGAGCTTCCTCCTCTTGGT 60.252 55.000 0.00 0.00 34.49 3.67
107 109 2.480419 CGAGCTTCTTTGTTTGGACGAT 59.520 45.455 0.00 0.00 0.00 3.73
108 110 1.864711 CGAGCTTCTTTGTTTGGACGA 59.135 47.619 0.00 0.00 0.00 4.20
111 113 0.586319 CGCGAGCTTCTTTGTTTGGA 59.414 50.000 0.00 0.00 0.00 3.53
116 118 2.022129 CGGTCGCGAGCTTCTTTGT 61.022 57.895 32.55 0.00 0.00 2.83
118 120 1.444553 CTCGGTCGCGAGCTTCTTT 60.445 57.895 32.55 0.00 0.00 2.52
132 134 4.776322 TCGCATTGGTGGCCTCGG 62.776 66.667 3.32 0.00 0.00 4.63
140 142 2.268076 GCCTTGGTGTCGCATTGGT 61.268 57.895 0.00 0.00 0.00 3.67
141 143 1.804396 TTGCCTTGGTGTCGCATTGG 61.804 55.000 0.00 0.00 31.44 3.16
156 159 2.985847 AGCGCCACCTCTTTTGCC 60.986 61.111 2.29 0.00 0.00 4.52
174 177 2.095853 CACATCAACGCTCATGGTTACC 59.904 50.000 0.00 0.00 0.00 2.85
176 179 3.000041 GTCACATCAACGCTCATGGTTA 59.000 45.455 0.00 0.00 0.00 2.85
179 182 0.729116 GGTCACATCAACGCTCATGG 59.271 55.000 0.00 0.00 0.00 3.66
187 190 2.228822 GGGACATGTTGGTCACATCAAC 59.771 50.000 0.00 0.00 43.17 3.18
189 192 1.271871 GGGGACATGTTGGTCACATCA 60.272 52.381 0.00 0.00 43.17 3.07
190 193 1.463674 GGGGACATGTTGGTCACATC 58.536 55.000 0.00 0.00 43.17 3.06
192 195 1.072332 CGGGGACATGTTGGTCACA 59.928 57.895 0.00 0.00 43.10 3.58
193 196 0.250553 TTCGGGGACATGTTGGTCAC 60.251 55.000 0.00 0.00 40.54 3.67
195 198 0.323629 TCTTCGGGGACATGTTGGTC 59.676 55.000 0.00 0.00 37.06 4.02
206 209 1.348036 ACCAACTTCTTCTCTTCGGGG 59.652 52.381 0.00 0.00 0.00 5.73
229 232 1.399791 CATCTTCTTTTGCCGGCTCTC 59.600 52.381 29.70 0.00 0.00 3.20
230 233 1.271597 ACATCTTCTTTTGCCGGCTCT 60.272 47.619 29.70 0.00 0.00 4.09
233 236 2.061028 CAAACATCTTCTTTTGCCGGC 58.939 47.619 22.73 22.73 0.00 6.13
244 247 1.429463 GCGTCTCGGTCAAACATCTT 58.571 50.000 0.00 0.00 0.00 2.40
252 255 1.080093 GTTCATGGCGTCTCGGTCA 60.080 57.895 0.00 0.00 0.00 4.02
257 260 1.067821 CTCCCTAGTTCATGGCGTCTC 59.932 57.143 0.00 0.00 0.00 3.36
261 264 0.105039 GTCCTCCCTAGTTCATGGCG 59.895 60.000 0.00 0.00 0.00 5.69
263 266 1.683917 CGAGTCCTCCCTAGTTCATGG 59.316 57.143 0.00 0.00 0.00 3.66
279 282 0.753262 GTCATAGTCCATGGCCGAGT 59.247 55.000 6.96 0.00 32.76 4.18
284 287 0.601311 GAGCGGTCATAGTCCATGGC 60.601 60.000 6.96 2.00 38.62 4.40
285 288 1.043816 AGAGCGGTCATAGTCCATGG 58.956 55.000 18.15 4.97 35.16 3.66
287 290 3.914426 AAAAGAGCGGTCATAGTCCAT 57.086 42.857 18.15 0.00 0.00 3.41
296 299 0.241213 GGCCTTCAAAAAGAGCGGTC 59.759 55.000 6.48 6.48 34.14 4.79
297 300 1.515521 CGGCCTTCAAAAAGAGCGGT 61.516 55.000 0.00 0.00 34.14 5.68
298 301 1.210155 CGGCCTTCAAAAAGAGCGG 59.790 57.895 0.00 0.00 34.14 5.52
301 304 0.673437 TTGCCGGCCTTCAAAAAGAG 59.327 50.000 26.77 0.00 34.14 2.85
309 312 3.111038 GCATACTTGCCGGCCTTC 58.889 61.111 26.77 1.83 43.38 3.46
329 332 1.442017 CGGCAACAAAGTTAGCGGC 60.442 57.895 0.00 0.00 0.00 6.53
332 335 1.442017 CGCCGGCAACAAAGTTAGC 60.442 57.895 28.98 0.00 0.00 3.09
335 338 1.098712 TTCTCGCCGGCAACAAAGTT 61.099 50.000 28.98 0.00 0.00 2.66
348 351 1.947456 ACAACCTCCAAGTTTTCTCGC 59.053 47.619 0.00 0.00 0.00 5.03
349 352 3.625764 TGAACAACCTCCAAGTTTTCTCG 59.374 43.478 0.00 0.00 0.00 4.04
352 355 6.816140 TCAAAATGAACAACCTCCAAGTTTTC 59.184 34.615 0.00 0.00 0.00 2.29
354 357 6.293004 TCAAAATGAACAACCTCCAAGTTT 57.707 33.333 0.00 0.00 0.00 2.66
361 364 4.301628 CAGCCTTCAAAATGAACAACCTC 58.698 43.478 0.00 0.00 32.21 3.85
362 365 3.070015 CCAGCCTTCAAAATGAACAACCT 59.930 43.478 0.00 0.00 32.21 3.50
386 389 2.880629 ATCTAGAGGCCGGCACACCT 62.881 60.000 30.85 16.56 37.24 4.00
387 390 1.972660 AATCTAGAGGCCGGCACACC 61.973 60.000 30.85 11.04 0.00 4.16
394 397 1.017387 GGCAACAAATCTAGAGGCCG 58.983 55.000 0.00 0.00 0.00 6.13
399 402 1.355971 GCGTCGGCAACAAATCTAGA 58.644 50.000 0.00 0.00 39.62 2.43
402 405 2.677003 CCGCGTCGGCAACAAATCT 61.677 57.895 4.92 0.00 41.17 2.40
418 421 1.933853 GATCAACCCATCGAGTTTCCG 59.066 52.381 0.00 0.00 0.00 4.30
420 423 3.600388 ACTGATCAACCCATCGAGTTTC 58.400 45.455 0.00 0.00 0.00 2.78
426 429 1.811965 TGCAAACTGATCAACCCATCG 59.188 47.619 0.00 0.00 0.00 3.84
428 431 2.173519 CCTGCAAACTGATCAACCCAT 58.826 47.619 0.00 0.00 0.00 4.00
429 432 1.619654 CCTGCAAACTGATCAACCCA 58.380 50.000 0.00 0.00 0.00 4.51
445 448 1.988467 CGTCATACATATGCGAGCCTG 59.012 52.381 1.58 0.00 36.23 4.85
449 452 1.336795 TGGCCGTCATACATATGCGAG 60.337 52.381 1.58 0.00 36.23 5.03
451 454 0.790207 GTGGCCGTCATACATATGCG 59.210 55.000 1.58 0.00 34.98 4.73
452 455 1.800586 CAGTGGCCGTCATACATATGC 59.199 52.381 1.58 0.00 33.76 3.14
475 490 1.079405 CCACCACGGCGTAGTTCAT 60.079 57.895 14.22 0.00 0.00 2.57
485 500 4.151512 GCAAATGAAATTTTACCACCACGG 59.848 41.667 0.00 0.00 46.10 4.94
487 502 6.610741 TTGCAAATGAAATTTTACCACCAC 57.389 33.333 0.00 0.00 46.10 4.16
488 503 7.630242 TTTTGCAAATGAAATTTTACCACCA 57.370 28.000 13.65 0.00 46.10 4.17
513 531 2.777972 CGTCCGGTCGCCTGGAATA 61.778 63.158 8.43 0.00 35.67 1.75
521 539 2.579787 CACATCTCGTCCGGTCGC 60.580 66.667 16.54 0.00 0.00 5.19
524 542 1.292223 CCAACACATCTCGTCCGGT 59.708 57.895 0.00 0.00 0.00 5.28
531 549 1.732259 CCTAACACGCCAACACATCTC 59.268 52.381 0.00 0.00 0.00 2.75
535 553 2.248135 CGCCTAACACGCCAACACA 61.248 57.895 0.00 0.00 0.00 3.72
536 554 2.554272 CGCCTAACACGCCAACAC 59.446 61.111 0.00 0.00 0.00 3.32
577 595 2.159393 ACAATGAAATGGCGTCCAATCG 60.159 45.455 2.68 0.00 36.95 3.34
578 596 3.438360 GACAATGAAATGGCGTCCAATC 58.562 45.455 2.68 5.64 36.95 2.67
579 597 2.166254 GGACAATGAAATGGCGTCCAAT 59.834 45.455 2.68 0.00 44.55 3.16
580 598 1.543802 GGACAATGAAATGGCGTCCAA 59.456 47.619 2.68 0.00 44.55 3.53
587 606 7.784037 TCCATTTGAATAGGACAATGAAATGG 58.216 34.615 0.00 0.00 35.23 3.16
609 628 7.488471 ACGTTCGTTTTGTTTGAATTTTATCCA 59.512 29.630 0.00 0.00 0.00 3.41
619 638 5.117287 CCTCAAAAACGTTCGTTTTGTTTGA 59.883 36.000 28.00 25.02 44.43 2.69
621 640 4.983538 ACCTCAAAAACGTTCGTTTTGTTT 59.016 33.333 28.00 15.35 44.43 2.83
625 644 3.120234 ACGACCTCAAAAACGTTCGTTTT 60.120 39.130 23.94 23.94 46.31 2.43
628 647 1.325338 CACGACCTCAAAAACGTTCGT 59.675 47.619 0.00 0.79 36.86 3.85
630 649 2.094734 ACACACGACCTCAAAAACGTTC 59.905 45.455 0.00 0.00 36.86 3.95
631 650 2.078392 ACACACGACCTCAAAAACGTT 58.922 42.857 0.00 0.00 36.86 3.99
633 652 2.436670 CAACACACGACCTCAAAAACG 58.563 47.619 0.00 0.00 0.00 3.60
634 653 2.420722 TCCAACACACGACCTCAAAAAC 59.579 45.455 0.00 0.00 0.00 2.43
639 658 0.828022 AACTCCAACACACGACCTCA 59.172 50.000 0.00 0.00 0.00 3.86
640 659 1.217882 CAACTCCAACACACGACCTC 58.782 55.000 0.00 0.00 0.00 3.85
641 660 0.179056 CCAACTCCAACACACGACCT 60.179 55.000 0.00 0.00 0.00 3.85
643 662 0.179067 TCCCAACTCCAACACACGAC 60.179 55.000 0.00 0.00 0.00 4.34
648 667 2.258726 GGCGTCCCAACTCCAACAC 61.259 63.158 0.00 0.00 30.20 3.32
661 680 1.696832 GCAGATCGTGAAAGGGCGTC 61.697 60.000 0.00 0.00 0.00 5.19
662 681 1.741770 GCAGATCGTGAAAGGGCGT 60.742 57.895 0.00 0.00 0.00 5.68
663 682 2.802667 CGCAGATCGTGAAAGGGCG 61.803 63.158 0.00 0.00 36.93 6.13
664 683 3.093278 CGCAGATCGTGAAAGGGC 58.907 61.111 0.00 0.00 0.00 5.19
673 692 2.160615 AGTATAGCAGCTACGCAGATCG 59.839 50.000 3.59 0.00 45.38 3.69
674 693 3.840890 AGTATAGCAGCTACGCAGATC 57.159 47.619 3.59 0.00 0.00 2.75
675 694 4.328536 ACTAGTATAGCAGCTACGCAGAT 58.671 43.478 3.59 0.00 44.39 2.90
676 695 3.741249 ACTAGTATAGCAGCTACGCAGA 58.259 45.455 3.59 0.00 44.39 4.26
677 696 4.691685 AGTACTAGTATAGCAGCTACGCAG 59.308 45.833 3.59 2.68 44.39 5.18
678 697 4.451435 CAGTACTAGTATAGCAGCTACGCA 59.549 45.833 3.59 0.00 44.39 5.24
679 698 4.142859 CCAGTACTAGTATAGCAGCTACGC 60.143 50.000 3.59 0.39 44.39 4.42
680 699 4.392445 CCCAGTACTAGTATAGCAGCTACG 59.608 50.000 3.59 0.00 44.39 3.51
681 700 4.701171 CCCCAGTACTAGTATAGCAGCTAC 59.299 50.000 3.59 0.00 44.39 3.58
682 701 4.353191 ACCCCAGTACTAGTATAGCAGCTA 59.647 45.833 4.10 4.10 44.39 3.32
683 702 3.140519 ACCCCAGTACTAGTATAGCAGCT 59.859 47.826 5.75 0.00 44.39 4.24
684 703 3.498334 ACCCCAGTACTAGTATAGCAGC 58.502 50.000 5.75 0.00 44.39 5.25
685 704 4.726583 TGACCCCAGTACTAGTATAGCAG 58.273 47.826 5.75 0.00 44.39 4.24
686 705 4.801521 TGACCCCAGTACTAGTATAGCA 57.198 45.455 5.75 0.00 44.39 3.49
687 706 5.539193 ACAATGACCCCAGTACTAGTATAGC 59.461 44.000 5.75 0.00 44.39 2.97
688 707 7.255871 GGAACAATGACCCCAGTACTAGTATAG 60.256 44.444 5.75 1.89 46.50 1.31
689 708 6.552350 GGAACAATGACCCCAGTACTAGTATA 59.448 42.308 5.75 0.00 0.00 1.47
690 709 5.365895 GGAACAATGACCCCAGTACTAGTAT 59.634 44.000 5.75 0.00 0.00 2.12
691 710 4.713321 GGAACAATGACCCCAGTACTAGTA 59.287 45.833 0.00 0.00 0.00 1.82
692 711 3.518303 GGAACAATGACCCCAGTACTAGT 59.482 47.826 0.00 0.00 0.00 2.57
693 712 3.775316 AGGAACAATGACCCCAGTACTAG 59.225 47.826 0.00 0.00 0.00 2.57
694 713 3.517901 CAGGAACAATGACCCCAGTACTA 59.482 47.826 0.00 0.00 0.00 1.82
695 714 2.305927 CAGGAACAATGACCCCAGTACT 59.694 50.000 0.00 0.00 0.00 2.73
696 715 2.711542 CAGGAACAATGACCCCAGTAC 58.288 52.381 0.00 0.00 0.00 2.73
697 716 1.004277 GCAGGAACAATGACCCCAGTA 59.996 52.381 0.00 0.00 0.00 2.74
698 717 0.251341 GCAGGAACAATGACCCCAGT 60.251 55.000 0.00 0.00 0.00 4.00
699 718 0.038744 AGCAGGAACAATGACCCCAG 59.961 55.000 0.00 0.00 0.00 4.45
700 719 1.281867 CTAGCAGGAACAATGACCCCA 59.718 52.381 0.00 0.00 0.00 4.96
701 720 1.282157 ACTAGCAGGAACAATGACCCC 59.718 52.381 0.00 0.00 0.00 4.95
702 721 2.749621 CAACTAGCAGGAACAATGACCC 59.250 50.000 0.00 0.00 0.00 4.46
703 722 2.749621 CCAACTAGCAGGAACAATGACC 59.250 50.000 0.00 0.00 0.00 4.02
704 723 3.412386 ACCAACTAGCAGGAACAATGAC 58.588 45.455 7.98 0.00 0.00 3.06
705 724 3.788227 ACCAACTAGCAGGAACAATGA 57.212 42.857 7.98 0.00 0.00 2.57
706 725 4.579869 ACTACCAACTAGCAGGAACAATG 58.420 43.478 7.98 0.00 0.00 2.82
707 726 4.910458 ACTACCAACTAGCAGGAACAAT 57.090 40.909 7.98 0.00 0.00 2.71
708 727 5.811796 TTACTACCAACTAGCAGGAACAA 57.188 39.130 7.98 0.00 0.00 2.83
709 728 5.811796 TTTACTACCAACTAGCAGGAACA 57.188 39.130 7.98 0.00 0.00 3.18
710 729 5.993441 TGTTTTACTACCAACTAGCAGGAAC 59.007 40.000 7.98 2.17 0.00 3.62
711 730 6.177310 TGTTTTACTACCAACTAGCAGGAA 57.823 37.500 7.98 0.00 0.00 3.36
712 731 5.811796 TGTTTTACTACCAACTAGCAGGA 57.188 39.130 7.98 0.00 0.00 3.86
713 732 6.870971 TTTGTTTTACTACCAACTAGCAGG 57.129 37.500 0.00 0.00 0.00 4.85
714 733 9.431887 TCTATTTGTTTTACTACCAACTAGCAG 57.568 33.333 0.00 0.00 0.00 4.24
715 734 9.431887 CTCTATTTGTTTTACTACCAACTAGCA 57.568 33.333 0.00 0.00 0.00 3.49
716 735 8.880750 CCTCTATTTGTTTTACTACCAACTAGC 58.119 37.037 0.00 0.00 0.00 3.42
717 736 8.880750 GCCTCTATTTGTTTTACTACCAACTAG 58.119 37.037 0.00 0.00 0.00 2.57
718 737 7.825761 GGCCTCTATTTGTTTTACTACCAACTA 59.174 37.037 0.00 0.00 0.00 2.24
719 738 6.657966 GGCCTCTATTTGTTTTACTACCAACT 59.342 38.462 0.00 0.00 0.00 3.16
720 739 6.657966 AGGCCTCTATTTGTTTTACTACCAAC 59.342 38.462 0.00 0.00 0.00 3.77
721 740 6.786122 AGGCCTCTATTTGTTTTACTACCAA 58.214 36.000 0.00 0.00 0.00 3.67
722 741 6.013206 TGAGGCCTCTATTTGTTTTACTACCA 60.013 38.462 32.28 4.09 0.00 3.25
723 742 6.412214 TGAGGCCTCTATTTGTTTTACTACC 58.588 40.000 32.28 1.17 0.00 3.18
724 743 7.916914 TTGAGGCCTCTATTTGTTTTACTAC 57.083 36.000 32.28 1.55 0.00 2.73
725 744 7.940137 TGTTTGAGGCCTCTATTTGTTTTACTA 59.060 33.333 32.28 4.87 0.00 1.82
726 745 6.775629 TGTTTGAGGCCTCTATTTGTTTTACT 59.224 34.615 32.28 0.00 0.00 2.24
727 746 6.977213 TGTTTGAGGCCTCTATTTGTTTTAC 58.023 36.000 32.28 17.37 0.00 2.01
728 747 7.589958 TTGTTTGAGGCCTCTATTTGTTTTA 57.410 32.000 32.28 6.14 0.00 1.52
729 748 6.478512 TTGTTTGAGGCCTCTATTTGTTTT 57.521 33.333 32.28 0.00 0.00 2.43
730 749 6.478512 TTTGTTTGAGGCCTCTATTTGTTT 57.521 33.333 32.28 0.00 0.00 2.83
731 750 6.670695 ATTTGTTTGAGGCCTCTATTTGTT 57.329 33.333 32.28 10.92 0.00 2.83
732 751 7.775053 TTATTTGTTTGAGGCCTCTATTTGT 57.225 32.000 32.28 15.48 0.00 2.83
736 755 9.003658 CGATATTTATTTGTTTGAGGCCTCTAT 57.996 33.333 32.28 16.83 0.00 1.98
737 756 7.444183 CCGATATTTATTTGTTTGAGGCCTCTA 59.556 37.037 32.28 23.49 0.00 2.43
738 757 6.263168 CCGATATTTATTTGTTTGAGGCCTCT 59.737 38.462 32.28 13.72 0.00 3.69
739 758 6.262273 TCCGATATTTATTTGTTTGAGGCCTC 59.738 38.462 26.78 26.78 0.00 4.70
740 759 6.126409 TCCGATATTTATTTGTTTGAGGCCT 58.874 36.000 3.86 3.86 0.00 5.19
741 760 6.385649 TCCGATATTTATTTGTTTGAGGCC 57.614 37.500 0.00 0.00 0.00 5.19
742 761 6.417930 GCTTCCGATATTTATTTGTTTGAGGC 59.582 38.462 0.00 0.00 0.00 4.70
743 762 6.632834 CGCTTCCGATATTTATTTGTTTGAGG 59.367 38.462 0.00 0.00 36.29 3.86
744 763 6.632834 CCGCTTCCGATATTTATTTGTTTGAG 59.367 38.462 0.00 0.00 36.29 3.02
745 764 6.316640 TCCGCTTCCGATATTTATTTGTTTGA 59.683 34.615 0.00 0.00 36.29 2.69
746 765 6.413818 GTCCGCTTCCGATATTTATTTGTTTG 59.586 38.462 0.00 0.00 36.29 2.93
760 779 2.736995 CGCTTTGTCCGCTTCCGA 60.737 61.111 0.00 0.00 36.29 4.55
807 826 1.732259 CACAGGATTATATTCCGCGGC 59.268 52.381 23.51 2.88 40.94 6.53
812 831 2.160417 GCAGCGCACAGGATTATATTCC 59.840 50.000 11.47 5.65 35.90 3.01
866 885 0.532196 GGCAATCCACTACGGCCTAC 60.532 60.000 0.00 0.00 41.39 3.18
867 886 0.978667 TGGCAATCCACTACGGCCTA 60.979 55.000 0.00 0.00 44.85 3.93
868 887 2.297895 TGGCAATCCACTACGGCCT 61.298 57.895 0.00 0.00 44.85 5.19
869 888 2.270850 TGGCAATCCACTACGGCC 59.729 61.111 0.00 0.00 44.82 6.13
931 951 5.163519 ACAACAACAAGAAGGAAATCACAGG 60.164 40.000 0.00 0.00 0.00 4.00
957 977 0.955919 CCTCCTCCGGCAACAAGAAC 60.956 60.000 0.00 0.00 0.00 3.01
995 1027 3.740128 ATCTCCACGTCCATGCCGC 62.740 63.158 3.27 0.00 0.00 6.53
996 1028 1.592669 GATCTCCACGTCCATGCCG 60.593 63.158 0.00 1.94 0.00 5.69
1122 1154 1.134371 GGAGGAGGAAAGATGAACCGG 60.134 57.143 0.00 0.00 0.00 5.28
1124 1156 2.171659 GGAGGAGGAGGAAAGATGAACC 59.828 54.545 0.00 0.00 0.00 3.62
1125 1157 3.111484 AGGAGGAGGAGGAAAGATGAAC 58.889 50.000 0.00 0.00 0.00 3.18
1127 1159 2.359781 GGAGGAGGAGGAGGAAAGATGA 60.360 54.545 0.00 0.00 0.00 2.92
1128 1160 2.046292 GGAGGAGGAGGAGGAAAGATG 58.954 57.143 0.00 0.00 0.00 2.90
1129 1161 1.943860 AGGAGGAGGAGGAGGAAAGAT 59.056 52.381 0.00 0.00 0.00 2.40
1132 1165 0.340208 GGAGGAGGAGGAGGAGGAAA 59.660 60.000 0.00 0.00 0.00 3.13
1134 1167 0.556380 AAGGAGGAGGAGGAGGAGGA 60.556 60.000 0.00 0.00 0.00 3.71
1140 1173 0.340208 GGGAAGAAGGAGGAGGAGGA 59.660 60.000 0.00 0.00 0.00 3.71
1143 1176 1.396594 GGGGGAAGAAGGAGGAGGA 59.603 63.158 0.00 0.00 0.00 3.71
1144 1177 0.550147 TTGGGGGAAGAAGGAGGAGG 60.550 60.000 0.00 0.00 0.00 4.30
1147 1180 0.621082 GAGTTGGGGGAAGAAGGAGG 59.379 60.000 0.00 0.00 0.00 4.30
1150 1183 2.519013 CAAAGAGTTGGGGGAAGAAGG 58.481 52.381 0.00 0.00 0.00 3.46
1163 1196 1.003233 GAGAAGGGCGGCAAAGAGT 60.003 57.895 12.47 0.00 0.00 3.24
1174 1209 0.034089 AAATTGGGCCGAGAGAAGGG 60.034 55.000 0.00 0.00 0.00 3.95
1175 1210 1.065126 AGAAATTGGGCCGAGAGAAGG 60.065 52.381 0.00 0.00 0.00 3.46
1182 1217 1.988293 TGAACAAGAAATTGGGCCGA 58.012 45.000 0.00 0.00 0.00 5.54
1183 1218 3.443681 AGTATGAACAAGAAATTGGGCCG 59.556 43.478 0.00 0.00 0.00 6.13
1187 1222 5.880054 ACGGAGTATGAACAAGAAATTGG 57.120 39.130 0.00 0.00 41.94 3.16
1195 1230 6.368791 CAGAGAATTGAACGGAGTATGAACAA 59.631 38.462 0.00 0.00 45.00 2.83
1200 1235 4.505922 GCTCAGAGAATTGAACGGAGTATG 59.494 45.833 0.00 0.00 45.00 2.39
1207 1242 1.002366 CGGGCTCAGAGAATTGAACG 58.998 55.000 0.00 0.00 0.00 3.95
1212 1247 2.103941 GAGAATCCGGGCTCAGAGAATT 59.896 50.000 0.00 0.00 0.00 2.17
1243 1278 4.508128 TTCGAGGATCCACGGCGC 62.508 66.667 27.87 0.00 0.00 6.53
1244 1279 1.215655 GATTTCGAGGATCCACGGCG 61.216 60.000 27.87 18.16 0.00 6.46
1266 1301 3.126000 GCAAGATCTCCGGCTATAAATGC 59.874 47.826 0.00 0.00 0.00 3.56
1290 1325 3.547468 CACGCAAAGGCAGTTAATTATGC 59.453 43.478 2.94 2.94 41.24 3.14
1292 1327 5.385509 AACACGCAAAGGCAGTTAATTAT 57.614 34.783 0.00 0.00 41.24 1.28
1322 1583 0.510359 CACACGAGCAGCAGAAGAAC 59.490 55.000 0.00 0.00 0.00 3.01
1335 1596 4.260139 TCTGTATGTAAAAGGCACACGA 57.740 40.909 0.00 0.00 0.00 4.35
1336 1597 5.351233 TTTCTGTATGTAAAAGGCACACG 57.649 39.130 0.00 0.00 0.00 4.49
1338 1599 6.701145 TGTTTTCTGTATGTAAAAGGCACA 57.299 33.333 0.00 0.00 0.00 4.57
1339 1600 7.995463 TTTGTTTTCTGTATGTAAAAGGCAC 57.005 32.000 0.00 0.00 0.00 5.01
1364 1630 6.346096 CATTCCTCATCAATTTGCAGGATTT 58.654 36.000 10.58 2.77 33.17 2.17
1366 1632 4.202223 GCATTCCTCATCAATTTGCAGGAT 60.202 41.667 10.58 0.00 33.17 3.24
1368 1634 3.118920 TGCATTCCTCATCAATTTGCAGG 60.119 43.478 0.00 0.00 34.03 4.85
1372 1638 4.377021 CCCATGCATTCCTCATCAATTTG 58.623 43.478 0.00 0.00 0.00 2.32
1373 1639 3.389983 CCCCATGCATTCCTCATCAATTT 59.610 43.478 0.00 0.00 0.00 1.82
1384 1650 4.768968 AGTAATCATAAGCCCCATGCATTC 59.231 41.667 0.00 0.00 44.83 2.67
1387 1653 3.117550 ACAGTAATCATAAGCCCCATGCA 60.118 43.478 0.00 0.00 44.83 3.96
1395 1667 5.801350 TGCAGAACACAGTAATCATAAGC 57.199 39.130 0.00 0.00 0.00 3.09
1416 1692 5.977129 ACGTAAAAGAAAGGCAATTTGAGTG 59.023 36.000 0.00 0.00 0.00 3.51
1422 1698 7.506328 AAGTCTACGTAAAAGAAAGGCAATT 57.494 32.000 0.00 0.00 0.00 2.32
1424 1700 8.436046 TTTAAGTCTACGTAAAAGAAAGGCAA 57.564 30.769 0.00 0.00 29.38 4.52
1436 1712 5.473066 AAGCCACCTTTTAAGTCTACGTA 57.527 39.130 0.00 0.00 0.00 3.57
1438 1714 4.083484 CCAAAGCCACCTTTTAAGTCTACG 60.083 45.833 0.00 0.00 39.20 3.51
1441 1717 3.910989 ACCAAAGCCACCTTTTAAGTCT 58.089 40.909 0.00 0.00 39.20 3.24
1447 1723 6.295632 GGATAATGTAACCAAAGCCACCTTTT 60.296 38.462 0.00 0.00 39.20 2.27
1450 1726 4.278310 GGATAATGTAACCAAAGCCACCT 58.722 43.478 0.00 0.00 0.00 4.00
1455 1731 4.532834 TGGAGGGATAATGTAACCAAAGC 58.467 43.478 0.00 0.00 0.00 3.51
1571 1851 2.165437 GACGAAGAGGAAGAGCATGTCT 59.835 50.000 0.00 0.00 36.94 3.41
1626 1910 5.923061 AGGGGAGAATAATTAGGGGAATGAA 59.077 40.000 0.00 0.00 0.00 2.57
1627 1911 5.495787 AGGGGAGAATAATTAGGGGAATGA 58.504 41.667 0.00 0.00 0.00 2.57
1628 1912 5.313240 TGAGGGGAGAATAATTAGGGGAATG 59.687 44.000 0.00 0.00 0.00 2.67
1629 1913 5.495787 TGAGGGGAGAATAATTAGGGGAAT 58.504 41.667 0.00 0.00 0.00 3.01
1647 1931 9.520515 ACTATAAACAATAATAAGCCATGAGGG 57.479 33.333 0.00 0.00 40.85 4.30
1672 1956 6.647212 TGTTGTCGAAGAATGATGTGATAC 57.353 37.500 0.00 0.00 39.69 2.24
1673 1957 7.096551 TCTTGTTGTCGAAGAATGATGTGATA 58.903 34.615 0.00 0.00 39.69 2.15
1721 2014 1.574263 AGGTAGCCCCTCTCTGTTTC 58.426 55.000 0.00 0.00 40.71 2.78
1746 2040 9.430838 GTCGAGTCAATTTATCATTTGATTGAG 57.569 33.333 0.00 0.00 38.69 3.02
1747 2041 8.116136 CGTCGAGTCAATTTATCATTTGATTGA 58.884 33.333 0.00 0.00 36.47 2.57
1748 2042 7.904977 ACGTCGAGTCAATTTATCATTTGATTG 59.095 33.333 0.00 0.00 34.60 2.67
1749 2043 7.974675 ACGTCGAGTCAATTTATCATTTGATT 58.025 30.769 0.00 0.00 34.60 2.57
1783 2077 7.308169 CGAGCATGCCATAATCTTTTGAGATAA 60.308 37.037 15.66 0.00 0.00 1.75
1790 2084 4.989279 AACGAGCATGCCATAATCTTTT 57.011 36.364 15.66 0.00 0.00 2.27
1818 2112 8.345565 ACTACAAAGCTGAGTAATTCTTGTTTG 58.654 33.333 0.43 0.00 0.00 2.93
1832 2126 6.993079 TGTTCAGAATAGACTACAAAGCTGA 58.007 36.000 0.00 0.00 0.00 4.26
1835 2129 6.481984 GCATGTTCAGAATAGACTACAAAGC 58.518 40.000 0.00 0.00 0.00 3.51
1836 2130 6.237942 CCGCATGTTCAGAATAGACTACAAAG 60.238 42.308 0.00 0.00 0.00 2.77
1843 2137 1.599542 GGCCGCATGTTCAGAATAGAC 59.400 52.381 0.00 0.00 0.00 2.59
1847 2141 1.210478 ACTAGGCCGCATGTTCAGAAT 59.790 47.619 0.00 0.00 0.00 2.40
1852 2146 1.330829 GCTTAACTAGGCCGCATGTTC 59.669 52.381 0.00 0.00 0.00 3.18
1859 2153 3.060602 GCATCTTAGCTTAACTAGGCCG 58.939 50.000 0.00 0.00 30.79 6.13
1873 2167 9.498307 CATATATATACACGTCGTTGCATCTTA 57.502 33.333 0.00 0.00 0.00 2.10
1874 2168 7.009265 GCATATATATACACGTCGTTGCATCTT 59.991 37.037 0.00 0.00 0.00 2.40
1878 2172 5.462405 TGCATATATATACACGTCGTTGCA 58.538 37.500 10.57 10.57 34.33 4.08
1883 2177 4.042398 GCCCTGCATATATATACACGTCG 58.958 47.826 0.00 0.00 0.00 5.12
1886 2180 3.796717 CACGCCCTGCATATATATACACG 59.203 47.826 0.00 0.00 0.00 4.49
1887 2181 4.755411 ACACGCCCTGCATATATATACAC 58.245 43.478 0.00 0.00 0.00 2.90
2052 2355 2.691011 GACTATGTCAGGGAGAGTGGTC 59.309 54.545 0.00 0.00 32.09 4.02
2086 2389 4.816385 AGAAGATTCAGAGACGCAAAACAA 59.184 37.500 0.00 0.00 0.00 2.83
2126 2430 2.202960 ACACACACACCGGAACCG 60.203 61.111 9.46 6.25 39.44 4.44
2198 2508 1.231958 CGCCCTACTCTCCTCTAGCG 61.232 65.000 0.00 0.00 36.06 4.26
2252 2565 5.099575 CACACACGCATGTACTACTAATCA 58.900 41.667 0.00 0.00 36.72 2.57
2261 2574 0.586319 ACAAGCACACACGCATGTAC 59.414 50.000 0.00 0.00 41.67 2.90
2262 2575 1.304254 AACAAGCACACACGCATGTA 58.696 45.000 0.00 0.00 42.57 2.29
2263 2576 0.455410 AAACAAGCACACACGCATGT 59.545 45.000 0.00 0.00 45.08 3.21
2275 2588 7.489574 TCATATTTTCAACCCAAAAACAAGC 57.510 32.000 0.00 0.00 0.00 4.01
2345 2659 1.136891 CCTGTCAGACAGTCACACACA 59.863 52.381 25.88 0.00 44.50 3.72
2346 2660 1.137086 ACCTGTCAGACAGTCACACAC 59.863 52.381 25.88 0.00 44.50 3.82
2408 2731 3.879892 GCAAATATCACCCCAGAGAGAAC 59.120 47.826 0.00 0.00 0.00 3.01
2411 2734 2.487934 CGCAAATATCACCCCAGAGAG 58.512 52.381 0.00 0.00 0.00 3.20
2420 2743 0.808125 TGTGGTGCCGCAAATATCAC 59.192 50.000 1.48 0.26 33.12 3.06
2427 2750 1.140589 CACTTTTGTGGTGCCGCAA 59.859 52.632 12.62 12.62 46.16 4.85
2428 2751 2.804167 CACTTTTGTGGTGCCGCA 59.196 55.556 0.00 0.00 46.16 5.69
2462 2819 9.871238 TCAGAGAAAGTTCAGTATAATAACCAC 57.129 33.333 0.00 0.00 0.00 4.16
2498 2855 3.176552 ACAAGATAGCAGTAGCAGCTG 57.823 47.619 10.11 10.11 45.49 4.24
2535 2892 5.184864 CCATACCTGTGGCAAGTAATTCAAA 59.815 40.000 0.00 0.00 31.43 2.69
2536 2893 4.704540 CCATACCTGTGGCAAGTAATTCAA 59.295 41.667 0.00 0.00 31.43 2.69
2537 2894 4.018870 TCCATACCTGTGGCAAGTAATTCA 60.019 41.667 0.00 0.00 39.19 2.57
2541 2898 3.265737 ACATCCATACCTGTGGCAAGTAA 59.734 43.478 0.00 0.00 39.19 2.24
2548 2905 6.438741 ACATCTAGATACATCCATACCTGTGG 59.561 42.308 4.54 0.00 40.76 4.17
2589 2956 0.372334 CCGTTCCAAATTACTCGCCG 59.628 55.000 0.00 0.00 0.00 6.46
2590 2957 1.664151 CTCCGTTCCAAATTACTCGCC 59.336 52.381 0.00 0.00 0.00 5.54
2591 2958 1.664151 CCTCCGTTCCAAATTACTCGC 59.336 52.381 0.00 0.00 0.00 5.03
2592 2959 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
2593 2960 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
2594 2961 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2595 2962 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2598 2988 2.844348 ACATACTCCCTCCGTTCCAAAT 59.156 45.455 0.00 0.00 0.00 2.32
2602 2992 0.179081 GCACATACTCCCTCCGTTCC 60.179 60.000 0.00 0.00 0.00 3.62
2604 2994 0.907704 TGGCACATACTCCCTCCGTT 60.908 55.000 0.00 0.00 0.00 4.44
2617 3007 1.720077 TACCCACCCACATTGGCACA 61.720 55.000 0.00 0.00 35.79 4.57
2621 3011 1.211949 CTACCTACCCACCCACATTGG 59.788 57.143 0.00 0.00 37.25 3.16
2622 3012 1.211949 CCTACCTACCCACCCACATTG 59.788 57.143 0.00 0.00 0.00 2.82
2623 3013 1.081513 TCCTACCTACCCACCCACATT 59.918 52.381 0.00 0.00 0.00 2.71
2624 3014 0.720232 TCCTACCTACCCACCCACAT 59.280 55.000 0.00 0.00 0.00 3.21
2625 3015 0.720232 ATCCTACCTACCCACCCACA 59.280 55.000 0.00 0.00 0.00 4.17
2626 3016 1.343681 TGATCCTACCTACCCACCCAC 60.344 57.143 0.00 0.00 0.00 4.61
2628 3018 2.417719 ATGATCCTACCTACCCACCC 57.582 55.000 0.00 0.00 0.00 4.61
2632 3022 7.094720 CGATCGATAATATGATCCTACCTACCC 60.095 44.444 10.26 0.00 38.17 3.69
2633 3023 7.660617 TCGATCGATAATATGATCCTACCTACC 59.339 40.741 15.15 0.00 38.17 3.18
2634 3024 8.604640 TCGATCGATAATATGATCCTACCTAC 57.395 38.462 15.15 0.00 38.17 3.18
2635 3025 9.438228 GATCGATCGATAATATGATCCTACCTA 57.562 37.037 29.45 0.00 38.17 3.08
2636 3026 8.160765 AGATCGATCGATAATATGATCCTACCT 58.839 37.037 29.45 14.26 38.17 3.08
2637 3027 8.330466 AGATCGATCGATAATATGATCCTACC 57.670 38.462 29.45 12.29 38.17 3.18
2638 3028 8.166066 CGAGATCGATCGATAATATGATCCTAC 58.834 40.741 29.45 12.70 45.56 3.18
2639 3029 7.332182 CCGAGATCGATCGATAATATGATCCTA 59.668 40.741 29.45 0.00 45.56 2.94
2640 3030 6.148645 CCGAGATCGATCGATAATATGATCCT 59.851 42.308 29.45 18.37 45.56 3.24
2658 3048 2.993899 CACTTGTACCAACACCGAGATC 59.006 50.000 0.00 0.00 34.61 2.75
2659 3049 2.870435 GCACTTGTACCAACACCGAGAT 60.870 50.000 0.00 0.00 34.61 2.75
2660 3050 1.539496 GCACTTGTACCAACACCGAGA 60.539 52.381 0.00 0.00 34.61 4.04
2661 3051 0.865769 GCACTTGTACCAACACCGAG 59.134 55.000 0.00 0.00 34.61 4.63
2699 3089 1.626321 TGATTCAGTCGCACCCCTAAA 59.374 47.619 0.00 0.00 0.00 1.85
2702 3092 1.194781 ACTGATTCAGTCGCACCCCT 61.195 55.000 13.61 0.00 41.21 4.79
2710 3103 1.208052 TGCCTGCCTACTGATTCAGTC 59.792 52.381 22.16 9.50 41.21 3.51
2728 3121 0.608035 TTGGTTCGGTGGGAATCTGC 60.608 55.000 0.00 0.00 36.67 4.26
2729 3122 1.539827 GTTTGGTTCGGTGGGAATCTG 59.460 52.381 0.00 0.00 36.67 2.90
2730 3123 1.546998 GGTTTGGTTCGGTGGGAATCT 60.547 52.381 0.00 0.00 36.67 2.40
2731 3124 0.885879 GGTTTGGTTCGGTGGGAATC 59.114 55.000 0.00 0.00 36.92 2.52
2740 3133 1.394618 TTCCAAGGTGGTTTGGTTCG 58.605 50.000 4.84 0.00 46.23 3.95
2746 3139 5.045942 AGTTTTGTTCATTCCAAGGTGGTTT 60.046 36.000 0.00 0.00 39.03 3.27
2792 3185 2.133553 GAGATCTGGTCACATGATGCG 58.866 52.381 0.00 0.00 0.00 4.73
2823 3216 1.293924 CTGAATCCGACATGTGGCTC 58.706 55.000 1.15 6.25 0.00 4.70
2834 3227 1.364626 GCACCACTGAGCTGAATCCG 61.365 60.000 0.00 0.00 0.00 4.18
2870 3263 7.556635 GCCCTTTTACTTTGGAATGATAGTACT 59.443 37.037 0.00 0.00 0.00 2.73
2871 3264 7.556635 AGCCCTTTTACTTTGGAATGATAGTAC 59.443 37.037 0.00 0.00 0.00 2.73
2872 3265 7.639378 AGCCCTTTTACTTTGGAATGATAGTA 58.361 34.615 0.00 0.00 0.00 1.82
2873 3266 6.494059 AGCCCTTTTACTTTGGAATGATAGT 58.506 36.000 0.00 0.00 0.00 2.12
2874 3267 7.410120 AAGCCCTTTTACTTTGGAATGATAG 57.590 36.000 0.00 0.00 0.00 2.08
2876 3269 7.978099 ATAAGCCCTTTTACTTTGGAATGAT 57.022 32.000 0.00 0.00 0.00 2.45
2877 3270 9.487442 AATATAAGCCCTTTTACTTTGGAATGA 57.513 29.630 0.00 0.00 0.00 2.57
2896 3289 9.838339 TCCTCTTTTGGCTTTCTCTAATATAAG 57.162 33.333 0.00 0.00 0.00 1.73
2900 3293 8.768397 TGTATCCTCTTTTGGCTTTCTCTAATA 58.232 33.333 0.00 0.00 0.00 0.98
2901 3294 7.633789 TGTATCCTCTTTTGGCTTTCTCTAAT 58.366 34.615 0.00 0.00 0.00 1.73
2903 3296 6.620877 TGTATCCTCTTTTGGCTTTCTCTA 57.379 37.500 0.00 0.00 0.00 2.43
2904 3297 5.505181 TGTATCCTCTTTTGGCTTTCTCT 57.495 39.130 0.00 0.00 0.00 3.10
2905 3298 6.765915 AATGTATCCTCTTTTGGCTTTCTC 57.234 37.500 0.00 0.00 0.00 2.87
2938 3331 7.500720 GGTGTGTACCACAGTTATAAAAAGT 57.499 36.000 14.03 0.00 45.43 2.66
2972 3366 0.668535 TATCGATGCTGAGGACACCG 59.331 55.000 8.54 0.00 0.00 4.94
2973 3367 2.101582 AGTTATCGATGCTGAGGACACC 59.898 50.000 8.54 0.00 0.00 4.16
2974 3368 3.067461 AGAGTTATCGATGCTGAGGACAC 59.933 47.826 8.54 0.00 0.00 3.67
2975 3369 3.291584 AGAGTTATCGATGCTGAGGACA 58.708 45.455 8.54 0.00 0.00 4.02
2976 3370 3.568007 AGAGAGTTATCGATGCTGAGGAC 59.432 47.826 8.54 0.00 0.00 3.85
2977 3371 3.826524 AGAGAGTTATCGATGCTGAGGA 58.173 45.455 8.54 0.00 0.00 3.71
2978 3372 4.297510 CAAGAGAGTTATCGATGCTGAGG 58.702 47.826 8.54 0.00 0.00 3.86
2979 3373 3.735240 GCAAGAGAGTTATCGATGCTGAG 59.265 47.826 8.54 0.00 35.41 3.35
2980 3374 3.491619 GGCAAGAGAGTTATCGATGCTGA 60.492 47.826 8.54 0.00 37.20 4.26
2981 3375 2.799412 GGCAAGAGAGTTATCGATGCTG 59.201 50.000 8.54 0.00 37.20 4.41
2982 3376 2.544694 CGGCAAGAGAGTTATCGATGCT 60.545 50.000 8.54 6.08 37.20 3.79
2983 3377 1.789464 CGGCAAGAGAGTTATCGATGC 59.211 52.381 8.54 0.09 36.67 3.91
2984 3378 2.791560 CACGGCAAGAGAGTTATCGATG 59.208 50.000 8.54 0.00 0.00 3.84
2985 3379 2.799917 GCACGGCAAGAGAGTTATCGAT 60.800 50.000 2.16 2.16 0.00 3.59
2986 3380 1.469251 GCACGGCAAGAGAGTTATCGA 60.469 52.381 0.00 0.00 0.00 3.59
2987 3381 0.924090 GCACGGCAAGAGAGTTATCG 59.076 55.000 0.00 0.00 0.00 2.92
2988 3382 1.134670 AGGCACGGCAAGAGAGTTATC 60.135 52.381 0.00 0.00 0.00 1.75
2989 3383 0.905357 AGGCACGGCAAGAGAGTTAT 59.095 50.000 0.00 0.00 0.00 1.89
2990 3384 1.203994 GTAGGCACGGCAAGAGAGTTA 59.796 52.381 0.00 0.00 0.00 2.24
2991 3385 0.037232 GTAGGCACGGCAAGAGAGTT 60.037 55.000 0.00 0.00 0.00 3.01
2992 3386 0.900647 AGTAGGCACGGCAAGAGAGT 60.901 55.000 0.00 0.00 0.00 3.24
2993 3387 0.459237 CAGTAGGCACGGCAAGAGAG 60.459 60.000 0.00 0.00 0.00 3.20
2994 3388 1.591703 CAGTAGGCACGGCAAGAGA 59.408 57.895 0.00 0.00 0.00 3.10
2995 3389 1.448540 CCAGTAGGCACGGCAAGAG 60.449 63.158 0.00 0.00 0.00 2.85
2996 3390 2.662596 CCAGTAGGCACGGCAAGA 59.337 61.111 0.00 0.00 0.00 3.02
3018 3412 4.082665 ACTACTGATGATTGCCTGATGG 57.917 45.455 0.00 0.00 0.00 3.51
3019 3413 5.011431 TCCTACTACTGATGATTGCCTGATG 59.989 44.000 0.00 0.00 0.00 3.07
3020 3414 5.150715 TCCTACTACTGATGATTGCCTGAT 58.849 41.667 0.00 0.00 0.00 2.90
3021 3415 4.546674 TCCTACTACTGATGATTGCCTGA 58.453 43.478 0.00 0.00 0.00 3.86
3022 3416 4.343526 ACTCCTACTACTGATGATTGCCTG 59.656 45.833 0.00 0.00 0.00 4.85
3023 3417 4.343526 CACTCCTACTACTGATGATTGCCT 59.656 45.833 0.00 0.00 0.00 4.75
3024 3418 4.502259 CCACTCCTACTACTGATGATTGCC 60.502 50.000 0.00 0.00 0.00 4.52
3025 3419 4.100189 ACCACTCCTACTACTGATGATTGC 59.900 45.833 0.00 0.00 0.00 3.56
3026 3420 5.506483 CGACCACTCCTACTACTGATGATTG 60.506 48.000 0.00 0.00 0.00 2.67
3027 3421 4.580995 CGACCACTCCTACTACTGATGATT 59.419 45.833 0.00 0.00 0.00 2.57
3028 3422 4.138290 CGACCACTCCTACTACTGATGAT 58.862 47.826 0.00 0.00 0.00 2.45
3029 3423 3.542648 CGACCACTCCTACTACTGATGA 58.457 50.000 0.00 0.00 0.00 2.92
3030 3424 2.619177 CCGACCACTCCTACTACTGATG 59.381 54.545 0.00 0.00 0.00 3.07
3031 3425 2.933573 CCGACCACTCCTACTACTGAT 58.066 52.381 0.00 0.00 0.00 2.90
3032 3426 1.681166 GCCGACCACTCCTACTACTGA 60.681 57.143 0.00 0.00 0.00 3.41
3033 3427 0.739561 GCCGACCACTCCTACTACTG 59.260 60.000 0.00 0.00 0.00 2.74
3034 3428 0.330604 TGCCGACCACTCCTACTACT 59.669 55.000 0.00 0.00 0.00 2.57
3035 3429 1.180029 TTGCCGACCACTCCTACTAC 58.820 55.000 0.00 0.00 0.00 2.73
3036 3430 1.547372 GTTTGCCGACCACTCCTACTA 59.453 52.381 0.00 0.00 0.00 1.82
3037 3431 0.320697 GTTTGCCGACCACTCCTACT 59.679 55.000 0.00 0.00 0.00 2.57
3038 3432 0.320697 AGTTTGCCGACCACTCCTAC 59.679 55.000 0.00 0.00 0.00 3.18
3039 3433 0.606604 GAGTTTGCCGACCACTCCTA 59.393 55.000 0.00 0.00 32.26 2.94
3040 3434 1.371558 GAGTTTGCCGACCACTCCT 59.628 57.895 0.00 0.00 32.26 3.69
3041 3435 2.027625 CGAGTTTGCCGACCACTCC 61.028 63.158 0.00 0.00 34.55 3.85
3042 3436 1.300697 ACGAGTTTGCCGACCACTC 60.301 57.895 0.00 0.00 34.68 3.51
3043 3437 1.594293 CACGAGTTTGCCGACCACT 60.594 57.895 0.00 0.00 0.00 4.00
3044 3438 1.828331 GACACGAGTTTGCCGACCAC 61.828 60.000 0.00 0.00 0.00 4.16
3045 3439 1.593209 GACACGAGTTTGCCGACCA 60.593 57.895 0.00 0.00 0.00 4.02
3046 3440 1.557443 CTGACACGAGTTTGCCGACC 61.557 60.000 0.00 0.00 0.00 4.79
3047 3441 0.874607 ACTGACACGAGTTTGCCGAC 60.875 55.000 0.00 0.00 0.00 4.79
3048 3442 0.179094 AACTGACACGAGTTTGCCGA 60.179 50.000 0.00 0.00 31.92 5.54
3049 3443 0.042188 CAACTGACACGAGTTTGCCG 60.042 55.000 0.00 0.00 33.75 5.69
3050 3444 0.317020 GCAACTGACACGAGTTTGCC 60.317 55.000 9.00 0.00 33.75 4.52
3051 3445 0.317020 GGCAACTGACACGAGTTTGC 60.317 55.000 11.06 11.06 33.75 3.68
3052 3446 3.825812 GGCAACTGACACGAGTTTG 57.174 52.632 0.00 0.00 33.75 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.