Multiple sequence alignment - TraesCS2A01G477300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G477300 chr2A 100.000 3713 0 0 3508 7220 716474195 716470483 0.000000e+00 6857
1 TraesCS2A01G477300 chr2A 100.000 2942 0 0 1 2942 716477702 716474761 0.000000e+00 5433
2 TraesCS2A01G477300 chr2A 97.063 2077 48 7 3511 5582 406692188 406690120 0.000000e+00 3485
3 TraesCS2A01G477300 chr2A 96.604 2091 53 5 3508 5582 707259652 707257564 0.000000e+00 3452
4 TraesCS2A01G477300 chr2A 96.517 2096 47 6 3508 5582 744047114 744045024 0.000000e+00 3443
5 TraesCS2A01G477300 chr2A 97.988 1640 32 1 5582 7220 735407750 735409389 0.000000e+00 2844
6 TraesCS2A01G477300 chr2A 96.220 1640 42 3 5582 7220 759034515 759036135 0.000000e+00 2667
7 TraesCS2A01G477300 chr2A 98.095 945 18 0 1293 2237 406701170 406700226 0.000000e+00 1646
8 TraesCS2A01G477300 chr2A 97.756 936 19 2 357 1292 735406820 735407753 0.000000e+00 1611
9 TraesCS2A01G477300 chr2A 98.261 575 10 0 718 1292 759033944 759034518 0.000000e+00 1007
10 TraesCS2A01G477300 chr2A 96.831 284 9 0 2659 2942 630443035 630443318 6.550000e-130 475
11 TraesCS2A01G477300 chr2A 96.441 281 10 0 357 637 759033665 759033945 1.420000e-126 464
12 TraesCS2A01G477300 chr2A 85.113 309 42 3 1 307 77336778 77336472 5.440000e-81 313
13 TraesCS2A01G477300 chr4A 97.228 2092 42 5 3508 5583 219335359 219337450 0.000000e+00 3528
14 TraesCS2A01G477300 chr4A 96.831 284 9 0 2659 2942 2761275 2760992 6.550000e-130 475
15 TraesCS2A01G477300 chr5A 96.848 2094 48 4 3508 5583 458417933 458415840 0.000000e+00 3485
16 TraesCS2A01G477300 chr5A 97.383 1108 25 3 1289 2394 661426967 661425862 0.000000e+00 1882
17 TraesCS2A01G477300 chr5A 95.395 1064 45 3 1881 2942 701820477 701819416 0.000000e+00 1690
18 TraesCS2A01G477300 chr5A 87.375 301 29 6 5301 5593 705530856 705530557 3.230000e-88 337
19 TraesCS2A01G477300 chr1A 96.759 2098 48 9 3508 5590 585701622 585703714 0.000000e+00 3480
20 TraesCS2A01G477300 chr1A 96.010 2105 54 6 3508 5582 543580916 543583020 0.000000e+00 3395
21 TraesCS2A01G477300 chr1A 92.692 1642 116 4 5582 7220 489163148 489161508 0.000000e+00 2364
22 TraesCS2A01G477300 chr1A 91.844 1410 88 17 1293 2696 584816699 584815311 0.000000e+00 1941
23 TraesCS2A01G477300 chr1A 96.487 1167 37 4 1778 2942 36289198 36288034 0.000000e+00 1925
24 TraesCS2A01G477300 chr1A 84.152 997 98 29 348 1292 489164133 489163145 0.000000e+00 911
25 TraesCS2A01G477300 chr1A 97.535 284 7 0 2659 2942 526405162 526404879 3.030000e-133 486
26 TraesCS2A01G477300 chr1A 96.831 284 8 1 2659 2942 585700343 585700625 2.360000e-129 473
27 TraesCS2A01G477300 chr1A 87.258 361 44 2 357 717 24356273 24356631 1.870000e-110 411
28 TraesCS2A01G477300 chr1A 87.258 361 44 2 357 717 24380724 24381082 1.870000e-110 411
29 TraesCS2A01G477300 chr7A 96.751 2093 47 7 3508 5582 694383422 694381333 0.000000e+00 3469
30 TraesCS2A01G477300 chr7A 92.401 1645 120 4 5578 7220 56102944 56104585 0.000000e+00 2340
31 TraesCS2A01G477300 chr7A 96.257 1416 47 5 1284 2696 712483827 712485239 0.000000e+00 2316
32 TraesCS2A01G477300 chr7A 95.668 1408 49 5 1292 2696 699030059 699031457 0.000000e+00 2252
33 TraesCS2A01G477300 chr7A 96.325 1170 37 5 1291 2459 634755102 634756266 0.000000e+00 1917
34 TraesCS2A01G477300 chr7A 96.804 1095 33 1 1286 2378 551234901 551235995 0.000000e+00 1827
35 TraesCS2A01G477300 chr7A 95.879 922 35 3 1778 2698 704367613 704366694 0.000000e+00 1489
36 TraesCS2A01G477300 chr7A 83.543 954 99 27 357 1260 56101981 56102926 0.000000e+00 839
37 TraesCS2A01G477300 chr7A 97.183 284 7 1 2659 2942 551236259 551236541 5.070000e-131 479
38 TraesCS2A01G477300 chr7A 86.728 324 43 0 1 324 733024919 733025242 1.910000e-95 361
39 TraesCS2A01G477300 chr7A 86.378 323 44 0 1 323 732922204 732922526 3.200000e-93 353
40 TraesCS2A01G477300 chr7A 84.419 353 53 2 3 354 732935335 732935686 5.360000e-91 346
41 TraesCS2A01G477300 chr7A 86.885 122 9 3 5467 5584 667949305 667949423 5.880000e-26 130
42 TraesCS2A01G477300 chr6A 96.565 2096 56 3 3508 5588 606659268 606661362 0.000000e+00 3458
43 TraesCS2A01G477300 chr6A 92.626 1641 116 4 5582 7220 587882405 587880768 0.000000e+00 2355
44 TraesCS2A01G477300 chr6A 83.874 986 101 29 357 1292 587883379 587882402 0.000000e+00 887
45 TraesCS2A01G477300 chr6A 83.439 314 52 0 9 322 610932901 610933214 7.080000e-75 292
46 TraesCS2A01G477300 chr6A 82.373 295 52 0 28 322 610945004 610945298 2.580000e-64 257
47 TraesCS2A01G477300 chr6A 86.188 181 5 4 5432 5594 10786644 10786466 2.070000e-40 178
48 TraesCS2A01G477300 chr3A 96.652 2091 51 4 3508 5582 696337589 696335502 0.000000e+00 3456
49 TraesCS2A01G477300 chr3A 96.588 1407 45 2 1292 2696 58006523 58007928 0.000000e+00 2329
50 TraesCS2A01G477300 chr3A 98.097 946 17 1 1293 2237 703804853 703803908 0.000000e+00 1646
51 TraesCS2A01G477300 chr3A 87.612 670 63 15 2279 2942 18327078 18326423 0.000000e+00 760
52 TraesCS2A01G477300 chr3A 92.683 451 31 1 2248 2696 41633587 41634037 0.000000e+00 649
53 TraesCS2A01G477300 chr3A 86.897 290 18 7 5330 5602 640645300 640645586 2.530000e-79 307
54 TraesCS2A01G477300 chr3A 88.192 271 13 8 5330 5582 666583428 666583159 9.100000e-79 305
55 TraesCS2A01G477300 chr3A 85.567 291 17 8 5330 5602 640734663 640734946 1.530000e-71 281
56 TraesCS2A01G477300 chr3B 97.195 1640 37 2 5582 7220 771429589 771427958 0.000000e+00 2765
57 TraesCS2A01G477300 chr3B 96.368 936 29 3 357 1292 771430516 771429586 0.000000e+00 1535
58 TraesCS2A01G477300 chr4D 92.931 1641 113 3 5582 7220 399430851 399429212 0.000000e+00 2385
59 TraesCS2A01G477300 chr4D 85.363 977 94 23 357 1292 399431816 399430848 0.000000e+00 966
60 TraesCS2A01G477300 chr4D 87.113 194 21 3 357 550 399426726 399426537 4.390000e-52 217
61 TraesCS2A01G477300 chr6B 92.256 1640 125 2 5582 7220 711729065 711730703 0.000000e+00 2324
62 TraesCS2A01G477300 chr6B 90.826 436 29 7 868 1292 711728633 711729068 2.260000e-159 573
63 TraesCS2A01G477300 chr6B 84.161 322 51 0 1 322 708125742 708126063 5.440000e-81 313
64 TraesCS2A01G477300 chr6B 84.416 308 48 0 1 308 708066269 708066576 3.270000e-78 303
65 TraesCS2A01G477300 chr6B 83.819 309 48 2 1 308 708072832 708073139 7.080000e-75 292
66 TraesCS2A01G477300 chr6B 83.492 315 50 2 9 322 708181146 708181459 7.080000e-75 292
67 TraesCS2A01G477300 chr6B 82.609 322 56 0 1 322 708056804 708057125 1.190000e-72 285
68 TraesCS2A01G477300 chr6B 93.478 184 5 2 5408 5584 15252196 15252013 4.290000e-67 267
69 TraesCS2A01G477300 chr5B 91.895 1641 126 5 5582 7220 594223518 594221883 0.000000e+00 2287
70 TraesCS2A01G477300 chr5B 84.623 982 101 25 352 1292 594224487 594223515 0.000000e+00 931
71 TraesCS2A01G477300 chr2B 98.291 936 16 0 357 1292 9120172 9119237 0.000000e+00 1640
72 TraesCS2A01G477300 chr2B 97.409 193 3 1 357 549 9115113 9114923 1.940000e-85 327
73 TraesCS2A01G477300 chr2B 85.161 310 42 3 1 308 118324163 118323856 1.510000e-81 315
74 TraesCS2A01G477300 chr4B 87.070 959 93 10 357 1292 390295012 390295962 0.000000e+00 1055
75 TraesCS2A01G477300 chr7B 84.663 326 48 2 1 325 750149668 750149344 2.510000e-84 324
76 TraesCS2A01G477300 chr7B 83.523 352 53 5 1 350 750320962 750321310 2.510000e-84 324
77 TraesCS2A01G477300 chr7B 86.195 297 38 3 1 295 750218791 750218496 1.170000e-82 318
78 TraesCS2A01G477300 chr6D 84.127 315 48 2 9 322 464347499 464347812 3.270000e-78 303
79 TraesCS2A01G477300 chr6D 82.609 322 56 0 1 322 464404544 464404865 1.190000e-72 285
80 TraesCS2A01G477300 chr6D 82.609 322 54 2 1 321 464432037 464432357 4.260000e-72 283


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G477300 chr2A 716470483 716477702 7219 True 6145.000000 6857 100.0000 1 7220 2 chr2A.!!$R6 7219
1 TraesCS2A01G477300 chr2A 406690120 406692188 2068 True 3485.000000 3485 97.0630 3511 5582 1 chr2A.!!$R2 2071
2 TraesCS2A01G477300 chr2A 707257564 707259652 2088 True 3452.000000 3452 96.6040 3508 5582 1 chr2A.!!$R4 2074
3 TraesCS2A01G477300 chr2A 744045024 744047114 2090 True 3443.000000 3443 96.5170 3508 5582 1 chr2A.!!$R5 2074
4 TraesCS2A01G477300 chr2A 735406820 735409389 2569 False 2227.500000 2844 97.8720 357 7220 2 chr2A.!!$F2 6863
5 TraesCS2A01G477300 chr2A 406700226 406701170 944 True 1646.000000 1646 98.0950 1293 2237 1 chr2A.!!$R3 944
6 TraesCS2A01G477300 chr2A 759033665 759036135 2470 False 1379.333333 2667 96.9740 357 7220 3 chr2A.!!$F3 6863
7 TraesCS2A01G477300 chr4A 219335359 219337450 2091 False 3528.000000 3528 97.2280 3508 5583 1 chr4A.!!$F1 2075
8 TraesCS2A01G477300 chr5A 458415840 458417933 2093 True 3485.000000 3485 96.8480 3508 5583 1 chr5A.!!$R1 2075
9 TraesCS2A01G477300 chr5A 661425862 661426967 1105 True 1882.000000 1882 97.3830 1289 2394 1 chr5A.!!$R2 1105
10 TraesCS2A01G477300 chr5A 701819416 701820477 1061 True 1690.000000 1690 95.3950 1881 2942 1 chr5A.!!$R3 1061
11 TraesCS2A01G477300 chr1A 543580916 543583020 2104 False 3395.000000 3395 96.0100 3508 5582 1 chr1A.!!$F3 2074
12 TraesCS2A01G477300 chr1A 585700343 585703714 3371 False 1976.500000 3480 96.7950 2659 5590 2 chr1A.!!$F4 2931
13 TraesCS2A01G477300 chr1A 584815311 584816699 1388 True 1941.000000 1941 91.8440 1293 2696 1 chr1A.!!$R3 1403
14 TraesCS2A01G477300 chr1A 36288034 36289198 1164 True 1925.000000 1925 96.4870 1778 2942 1 chr1A.!!$R1 1164
15 TraesCS2A01G477300 chr1A 489161508 489164133 2625 True 1637.500000 2364 88.4220 348 7220 2 chr1A.!!$R4 6872
16 TraesCS2A01G477300 chr7A 694381333 694383422 2089 True 3469.000000 3469 96.7510 3508 5582 1 chr7A.!!$R1 2074
17 TraesCS2A01G477300 chr7A 712483827 712485239 1412 False 2316.000000 2316 96.2570 1284 2696 1 chr7A.!!$F4 1412
18 TraesCS2A01G477300 chr7A 699030059 699031457 1398 False 2252.000000 2252 95.6680 1292 2696 1 chr7A.!!$F3 1404
19 TraesCS2A01G477300 chr7A 634755102 634756266 1164 False 1917.000000 1917 96.3250 1291 2459 1 chr7A.!!$F1 1168
20 TraesCS2A01G477300 chr7A 56101981 56104585 2604 False 1589.500000 2340 87.9720 357 7220 2 chr7A.!!$F8 6863
21 TraesCS2A01G477300 chr7A 704366694 704367613 919 True 1489.000000 1489 95.8790 1778 2698 1 chr7A.!!$R2 920
22 TraesCS2A01G477300 chr7A 551234901 551236541 1640 False 1153.000000 1827 96.9935 1286 2942 2 chr7A.!!$F9 1656
23 TraesCS2A01G477300 chr6A 606659268 606661362 2094 False 3458.000000 3458 96.5650 3508 5588 1 chr6A.!!$F1 2080
24 TraesCS2A01G477300 chr6A 587880768 587883379 2611 True 1621.000000 2355 88.2500 357 7220 2 chr6A.!!$R2 6863
25 TraesCS2A01G477300 chr3A 696335502 696337589 2087 True 3456.000000 3456 96.6520 3508 5582 1 chr3A.!!$R3 2074
26 TraesCS2A01G477300 chr3A 58006523 58007928 1405 False 2329.000000 2329 96.5880 1292 2696 1 chr3A.!!$F2 1404
27 TraesCS2A01G477300 chr3A 703803908 703804853 945 True 1646.000000 1646 98.0970 1293 2237 1 chr3A.!!$R4 944
28 TraesCS2A01G477300 chr3A 18326423 18327078 655 True 760.000000 760 87.6120 2279 2942 1 chr3A.!!$R1 663
29 TraesCS2A01G477300 chr3B 771427958 771430516 2558 True 2150.000000 2765 96.7815 357 7220 2 chr3B.!!$R1 6863
30 TraesCS2A01G477300 chr4D 399426537 399431816 5279 True 1189.333333 2385 88.4690 357 7220 3 chr4D.!!$R1 6863
31 TraesCS2A01G477300 chr6B 711728633 711730703 2070 False 1448.500000 2324 91.5410 868 7220 2 chr6B.!!$F6 6352
32 TraesCS2A01G477300 chr5B 594221883 594224487 2604 True 1609.000000 2287 88.2590 352 7220 2 chr5B.!!$R1 6868
33 TraesCS2A01G477300 chr2B 9119237 9120172 935 True 1640.000000 1640 98.2910 357 1292 1 chr2B.!!$R2 935
34 TraesCS2A01G477300 chr4B 390295012 390295962 950 False 1055.000000 1055 87.0700 357 1292 1 chr4B.!!$F1 935

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 339 0.109597 CAACTTGCTCATCGTTGGCC 60.110 55.000 0.00 0.00 35.57 5.36 F
350 351 0.179086 CGTTGGCCCCCATTATTTGC 60.179 55.000 0.00 0.00 31.53 3.68 F
354 355 1.008206 TGGCCCCCATTATTTGCTTCT 59.992 47.619 0.00 0.00 0.00 2.85 F
674 678 1.929230 CAGTCGTGTGTTGTGGTGTA 58.071 50.000 0.00 0.00 0.00 2.90 F
1717 1787 2.433604 AGCTATGTGCAGTGCAGTCTAT 59.566 45.455 20.42 12.95 45.94 1.98 F
2651 2727 1.216930 ACTAAACTTTGGGGTGGCAGT 59.783 47.619 0.00 0.00 0.00 4.40 F
4442 5003 1.743623 CATGTCCGGCGCTTGGTAA 60.744 57.895 16.85 8.53 0.00 2.85 F
4446 5007 1.003112 TCCGGCGCTTGGTAAACAT 60.003 52.632 16.85 0.00 0.00 2.71 F
5918 6536 0.036388 CAGGAGCTTAACCTTCGGCA 60.036 55.000 0.00 0.00 35.35 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1606 1676 1.068434 TCATTGTCTGTGCACTCACGA 59.932 47.619 19.41 14.0 46.01 4.35 R
1717 1787 4.127171 GCTTCAAGCCATTCGGAATAGTA 58.873 43.478 0.00 0.0 34.48 1.82 R
2162 2234 5.794687 AATTGATGACGTCGCTTTGAATA 57.205 34.783 11.62 0.0 0.00 1.75 R
2651 2727 1.514087 CGGTACTAAAGGCCTCGCA 59.486 57.895 5.23 0.0 0.00 5.10 R
2686 2805 2.236395 GGAAGAGCAGGCCTTTAGTACA 59.764 50.000 0.00 0.0 0.00 2.90 R
4446 5007 1.380785 CCGGGGCAGTAGTAGGTCA 60.381 63.158 0.00 0.0 0.00 4.02 R
5702 6320 2.818751 TTCCTCCATAATGCGGGTTT 57.181 45.000 0.00 0.0 0.00 3.27 R
6165 6783 3.954258 CCTTTTCCCACCAAGATGGATAC 59.046 47.826 2.85 0.0 43.02 2.24 R
6810 7430 3.339141 TGCGGTGATGCAACAATAACTA 58.661 40.909 0.00 0.0 43.02 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.084011 TCAAACTCATCCACATCACACA 57.916 40.909 0.00 0.00 0.00 3.72
22 23 4.654915 TCAAACTCATCCACATCACACAT 58.345 39.130 0.00 0.00 0.00 3.21
23 24 4.456566 TCAAACTCATCCACATCACACATG 59.543 41.667 0.00 0.00 0.00 3.21
24 25 3.986996 ACTCATCCACATCACACATGA 57.013 42.857 0.00 0.00 39.83 3.07
25 26 3.603532 ACTCATCCACATCACACATGAC 58.396 45.455 0.00 0.00 37.79 3.06
26 27 3.008266 ACTCATCCACATCACACATGACA 59.992 43.478 0.00 0.00 37.79 3.58
27 28 3.602483 TCATCCACATCACACATGACAG 58.398 45.455 0.00 0.00 37.79 3.51
28 29 3.261390 TCATCCACATCACACATGACAGA 59.739 43.478 0.00 0.00 37.79 3.41
29 30 3.986996 TCCACATCACACATGACAGAT 57.013 42.857 0.00 0.00 37.79 2.90
30 31 3.865446 TCCACATCACACATGACAGATC 58.135 45.455 0.00 0.00 37.79 2.75
31 32 3.516700 TCCACATCACACATGACAGATCT 59.483 43.478 0.00 0.00 37.79 2.75
32 33 4.019950 TCCACATCACACATGACAGATCTT 60.020 41.667 0.00 0.00 37.79 2.40
33 34 4.698780 CCACATCACACATGACAGATCTTT 59.301 41.667 0.00 0.00 37.79 2.52
34 35 5.182570 CCACATCACACATGACAGATCTTTT 59.817 40.000 0.00 0.00 37.79 2.27
35 36 6.084277 CACATCACACATGACAGATCTTTTG 58.916 40.000 0.00 0.00 37.79 2.44
36 37 5.766670 ACATCACACATGACAGATCTTTTGT 59.233 36.000 0.00 0.00 37.79 2.83
37 38 6.936335 ACATCACACATGACAGATCTTTTGTA 59.064 34.615 0.00 0.00 37.79 2.41
38 39 7.609146 ACATCACACATGACAGATCTTTTGTAT 59.391 33.333 0.00 0.00 37.79 2.29
39 40 7.368480 TCACACATGACAGATCTTTTGTATG 57.632 36.000 0.00 0.00 0.00 2.39
40 41 7.160726 TCACACATGACAGATCTTTTGTATGA 58.839 34.615 0.00 0.00 0.00 2.15
41 42 7.825761 TCACACATGACAGATCTTTTGTATGAT 59.174 33.333 0.00 0.00 0.00 2.45
42 43 7.908601 CACACATGACAGATCTTTTGTATGATG 59.091 37.037 0.00 0.00 0.00 3.07
43 44 7.066645 ACACATGACAGATCTTTTGTATGATGG 59.933 37.037 0.00 0.00 0.00 3.51
44 45 7.066645 CACATGACAGATCTTTTGTATGATGGT 59.933 37.037 0.00 0.00 0.00 3.55
45 46 8.267183 ACATGACAGATCTTTTGTATGATGGTA 58.733 33.333 0.00 0.00 0.00 3.25
46 47 9.112725 CATGACAGATCTTTTGTATGATGGTAA 57.887 33.333 0.00 0.00 0.00 2.85
47 48 9.685276 ATGACAGATCTTTTGTATGATGGTAAA 57.315 29.630 0.00 0.00 0.00 2.01
48 49 9.166173 TGACAGATCTTTTGTATGATGGTAAAG 57.834 33.333 0.00 0.00 0.00 1.85
49 50 7.989826 ACAGATCTTTTGTATGATGGTAAAGC 58.010 34.615 0.00 0.00 0.00 3.51
50 51 7.831193 ACAGATCTTTTGTATGATGGTAAAGCT 59.169 33.333 0.00 0.00 0.00 3.74
51 52 8.680903 CAGATCTTTTGTATGATGGTAAAGCTT 58.319 33.333 0.00 0.00 0.00 3.74
52 53 9.247861 AGATCTTTTGTATGATGGTAAAGCTTT 57.752 29.630 17.30 17.30 0.00 3.51
53 54 9.294030 GATCTTTTGTATGATGGTAAAGCTTTG 57.706 33.333 22.02 0.00 0.00 2.77
54 55 7.090173 TCTTTTGTATGATGGTAAAGCTTTGC 58.910 34.615 22.02 19.90 0.00 3.68
55 56 6.588719 TTTGTATGATGGTAAAGCTTTGCT 57.411 33.333 23.82 7.89 42.56 3.91
56 57 7.695480 TTTGTATGATGGTAAAGCTTTGCTA 57.305 32.000 23.82 19.74 38.25 3.49
57 58 6.677781 TGTATGATGGTAAAGCTTTGCTAC 57.322 37.500 23.82 17.93 38.25 3.58
58 59 6.414732 TGTATGATGGTAAAGCTTTGCTACT 58.585 36.000 23.82 10.87 38.25 2.57
59 60 7.561251 TGTATGATGGTAAAGCTTTGCTACTA 58.439 34.615 23.82 12.28 38.25 1.82
60 61 8.044309 TGTATGATGGTAAAGCTTTGCTACTAA 58.956 33.333 23.82 9.93 38.25 2.24
61 62 7.938140 ATGATGGTAAAGCTTTGCTACTAAA 57.062 32.000 23.82 7.76 38.25 1.85
62 63 7.753309 TGATGGTAAAGCTTTGCTACTAAAA 57.247 32.000 23.82 3.31 38.25 1.52
63 64 8.172352 TGATGGTAAAGCTTTGCTACTAAAAA 57.828 30.769 23.82 0.00 38.25 1.94
64 65 8.296713 TGATGGTAAAGCTTTGCTACTAAAAAG 58.703 33.333 23.82 0.00 38.25 2.27
65 66 7.576861 TGGTAAAGCTTTGCTACTAAAAAGT 57.423 32.000 23.82 0.00 38.25 2.66
66 67 8.002984 TGGTAAAGCTTTGCTACTAAAAAGTT 57.997 30.769 23.82 0.00 38.25 2.66
67 68 8.132995 TGGTAAAGCTTTGCTACTAAAAAGTTC 58.867 33.333 23.82 5.95 38.25 3.01
68 69 7.594015 GGTAAAGCTTTGCTACTAAAAAGTTCC 59.406 37.037 23.82 1.70 38.25 3.62
69 70 5.707242 AGCTTTGCTACTAAAAAGTTCCC 57.293 39.130 0.00 0.00 36.99 3.97
70 71 5.137551 AGCTTTGCTACTAAAAAGTTCCCA 58.862 37.500 0.00 0.00 36.99 4.37
71 72 5.596772 AGCTTTGCTACTAAAAAGTTCCCAA 59.403 36.000 0.00 0.00 36.99 4.12
72 73 5.690409 GCTTTGCTACTAAAAAGTTCCCAAC 59.310 40.000 0.00 0.00 36.09 3.77
73 74 6.461092 GCTTTGCTACTAAAAAGTTCCCAACT 60.461 38.462 0.00 0.00 45.46 3.16
86 87 5.946486 AGTTCCCAACTTTTCTCTTCATCT 58.054 37.500 0.00 0.00 39.04 2.90
87 88 7.079451 AGTTCCCAACTTTTCTCTTCATCTA 57.921 36.000 0.00 0.00 39.04 1.98
88 89 7.518188 AGTTCCCAACTTTTCTCTTCATCTAA 58.482 34.615 0.00 0.00 39.04 2.10
89 90 7.663493 AGTTCCCAACTTTTCTCTTCATCTAAG 59.337 37.037 0.00 0.00 39.04 2.18
90 91 7.079451 TCCCAACTTTTCTCTTCATCTAAGT 57.921 36.000 0.00 0.00 36.51 2.24
91 92 6.936900 TCCCAACTTTTCTCTTCATCTAAGTG 59.063 38.462 0.00 0.00 36.51 3.16
92 93 6.348868 CCCAACTTTTCTCTTCATCTAAGTGC 60.349 42.308 0.00 0.00 36.51 4.40
93 94 6.429385 CCAACTTTTCTCTTCATCTAAGTGCT 59.571 38.462 0.00 0.00 36.51 4.40
94 95 7.040823 CCAACTTTTCTCTTCATCTAAGTGCTT 60.041 37.037 0.00 0.00 36.51 3.91
95 96 7.665561 ACTTTTCTCTTCATCTAAGTGCTTC 57.334 36.000 0.00 0.00 36.51 3.86
96 97 7.220030 ACTTTTCTCTTCATCTAAGTGCTTCA 58.780 34.615 0.00 0.00 36.51 3.02
97 98 7.716998 ACTTTTCTCTTCATCTAAGTGCTTCAA 59.283 33.333 0.00 0.00 36.51 2.69
98 99 8.450578 TTTTCTCTTCATCTAAGTGCTTCAAA 57.549 30.769 0.00 0.00 36.51 2.69
99 100 8.450578 TTTCTCTTCATCTAAGTGCTTCAAAA 57.549 30.769 0.00 0.00 36.51 2.44
100 101 7.426929 TCTCTTCATCTAAGTGCTTCAAAAC 57.573 36.000 0.00 0.00 36.51 2.43
101 102 6.992123 TCTCTTCATCTAAGTGCTTCAAAACA 59.008 34.615 0.00 0.00 36.51 2.83
102 103 7.663081 TCTCTTCATCTAAGTGCTTCAAAACAT 59.337 33.333 0.00 0.00 36.51 2.71
103 104 7.587629 TCTTCATCTAAGTGCTTCAAAACATG 58.412 34.615 0.00 0.00 36.51 3.21
104 105 7.445096 TCTTCATCTAAGTGCTTCAAAACATGA 59.555 33.333 0.00 0.00 36.51 3.07
105 106 7.509141 TCATCTAAGTGCTTCAAAACATGAA 57.491 32.000 0.00 0.00 45.71 2.57
106 107 7.362662 TCATCTAAGTGCTTCAAAACATGAAC 58.637 34.615 0.00 0.00 43.08 3.18
107 108 6.691754 TCTAAGTGCTTCAAAACATGAACA 57.308 33.333 0.00 0.00 43.08 3.18
108 109 7.275888 TCTAAGTGCTTCAAAACATGAACAT 57.724 32.000 0.00 0.00 43.08 2.71
109 110 7.140705 TCTAAGTGCTTCAAAACATGAACATG 58.859 34.615 12.43 12.43 43.08 3.21
110 111 4.624015 AGTGCTTCAAAACATGAACATGG 58.376 39.130 17.25 2.04 43.08 3.66
111 112 3.742369 GTGCTTCAAAACATGAACATGGG 59.258 43.478 17.25 5.93 43.08 4.00
112 113 3.387374 TGCTTCAAAACATGAACATGGGT 59.613 39.130 17.25 4.09 43.08 4.51
113 114 4.141756 TGCTTCAAAACATGAACATGGGTT 60.142 37.500 17.25 9.18 43.08 4.11
114 115 4.211794 GCTTCAAAACATGAACATGGGTTG 59.788 41.667 17.25 17.76 43.08 3.77
115 116 4.333913 TCAAAACATGAACATGGGTTGG 57.666 40.909 21.11 13.05 42.91 3.77
116 117 2.807392 CAAAACATGAACATGGGTTGGC 59.193 45.455 17.25 0.00 42.91 4.52
117 118 1.714541 AACATGAACATGGGTTGGCA 58.285 45.000 17.25 0.00 42.91 4.92
118 119 1.941377 ACATGAACATGGGTTGGCAT 58.059 45.000 17.25 0.00 42.91 4.40
119 120 1.826720 ACATGAACATGGGTTGGCATC 59.173 47.619 17.25 0.00 42.91 3.91
120 121 2.104967 CATGAACATGGGTTGGCATCT 58.895 47.619 6.87 0.00 37.36 2.90
121 122 1.548081 TGAACATGGGTTGGCATCTG 58.452 50.000 0.00 0.00 37.36 2.90
122 123 1.075212 TGAACATGGGTTGGCATCTGA 59.925 47.619 0.00 0.00 37.36 3.27
123 124 2.170166 GAACATGGGTTGGCATCTGAA 58.830 47.619 0.00 0.00 37.36 3.02
124 125 1.549203 ACATGGGTTGGCATCTGAAC 58.451 50.000 0.00 0.00 0.00 3.18
125 126 1.203038 ACATGGGTTGGCATCTGAACA 60.203 47.619 0.00 0.00 0.00 3.18
126 127 2.104967 CATGGGTTGGCATCTGAACAT 58.895 47.619 0.00 0.00 0.00 2.71
127 128 1.548081 TGGGTTGGCATCTGAACATG 58.452 50.000 0.00 0.00 0.00 3.21
128 129 1.075212 TGGGTTGGCATCTGAACATGA 59.925 47.619 0.00 0.00 0.00 3.07
129 130 2.291735 TGGGTTGGCATCTGAACATGAT 60.292 45.455 0.00 0.00 0.00 2.45
130 131 2.762327 GGGTTGGCATCTGAACATGATT 59.238 45.455 0.00 0.00 0.00 2.57
131 132 3.196254 GGGTTGGCATCTGAACATGATTT 59.804 43.478 0.00 0.00 0.00 2.17
132 133 4.178540 GGTTGGCATCTGAACATGATTTG 58.821 43.478 0.00 0.00 0.00 2.32
133 134 3.513680 TGGCATCTGAACATGATTTGC 57.486 42.857 0.00 0.00 0.00 3.68
134 135 2.826725 TGGCATCTGAACATGATTTGCA 59.173 40.909 0.00 0.00 0.00 4.08
135 136 3.258622 TGGCATCTGAACATGATTTGCAA 59.741 39.130 0.00 0.00 0.00 4.08
136 137 3.615496 GGCATCTGAACATGATTTGCAAC 59.385 43.478 0.00 0.00 0.00 4.17
137 138 4.239304 GCATCTGAACATGATTTGCAACA 58.761 39.130 0.00 0.00 0.00 3.33
138 139 4.868171 GCATCTGAACATGATTTGCAACAT 59.132 37.500 0.00 0.00 0.00 2.71
139 140 5.005394 GCATCTGAACATGATTTGCAACATC 59.995 40.000 0.00 6.65 0.00 3.06
140 141 5.970317 TCTGAACATGATTTGCAACATCT 57.030 34.783 16.99 3.30 0.00 2.90
141 142 6.335471 TCTGAACATGATTTGCAACATCTT 57.665 33.333 16.99 11.14 0.00 2.40
142 143 6.384224 TCTGAACATGATTTGCAACATCTTC 58.616 36.000 16.99 13.44 0.00 2.87
143 144 5.472148 TGAACATGATTTGCAACATCTTCC 58.528 37.500 16.99 3.74 0.00 3.46
144 145 5.244402 TGAACATGATTTGCAACATCTTCCT 59.756 36.000 16.99 5.85 0.00 3.36
145 146 5.733620 ACATGATTTGCAACATCTTCCTT 57.266 34.783 16.99 2.60 0.00 3.36
146 147 6.105397 ACATGATTTGCAACATCTTCCTTT 57.895 33.333 16.99 1.27 0.00 3.11
147 148 6.161381 ACATGATTTGCAACATCTTCCTTTC 58.839 36.000 16.99 0.00 0.00 2.62
148 149 4.797471 TGATTTGCAACATCTTCCTTTCG 58.203 39.130 16.99 0.00 0.00 3.46
149 150 4.278170 TGATTTGCAACATCTTCCTTTCGT 59.722 37.500 16.99 0.00 0.00 3.85
150 151 3.624326 TTGCAACATCTTCCTTTCGTG 57.376 42.857 0.00 0.00 0.00 4.35
151 152 2.571212 TGCAACATCTTCCTTTCGTGT 58.429 42.857 0.00 0.00 0.00 4.49
152 153 2.290367 TGCAACATCTTCCTTTCGTGTG 59.710 45.455 0.00 0.00 0.00 3.82
153 154 2.350772 GCAACATCTTCCTTTCGTGTGG 60.351 50.000 0.00 0.00 0.00 4.17
154 155 2.878406 CAACATCTTCCTTTCGTGTGGT 59.122 45.455 0.00 0.00 0.00 4.16
155 156 3.208747 ACATCTTCCTTTCGTGTGGTT 57.791 42.857 0.00 0.00 0.00 3.67
156 157 4.345859 ACATCTTCCTTTCGTGTGGTTA 57.654 40.909 0.00 0.00 0.00 2.85
157 158 4.315803 ACATCTTCCTTTCGTGTGGTTAG 58.684 43.478 0.00 0.00 0.00 2.34
158 159 2.762745 TCTTCCTTTCGTGTGGTTAGC 58.237 47.619 0.00 0.00 0.00 3.09
159 160 2.103432 TCTTCCTTTCGTGTGGTTAGCA 59.897 45.455 0.00 0.00 0.00 3.49
160 161 2.163818 TCCTTTCGTGTGGTTAGCAG 57.836 50.000 0.00 0.00 0.00 4.24
161 162 1.414919 TCCTTTCGTGTGGTTAGCAGT 59.585 47.619 0.00 0.00 0.00 4.40
162 163 2.629137 TCCTTTCGTGTGGTTAGCAGTA 59.371 45.455 0.00 0.00 0.00 2.74
163 164 2.735134 CCTTTCGTGTGGTTAGCAGTAC 59.265 50.000 0.00 0.00 0.00 2.73
164 165 3.554337 CCTTTCGTGTGGTTAGCAGTACT 60.554 47.826 0.00 0.00 0.00 2.73
165 166 3.293311 TTCGTGTGGTTAGCAGTACTC 57.707 47.619 0.00 0.00 0.00 2.59
166 167 2.511659 TCGTGTGGTTAGCAGTACTCT 58.488 47.619 0.00 0.00 0.00 3.24
167 168 3.678289 TCGTGTGGTTAGCAGTACTCTA 58.322 45.455 0.00 0.00 0.00 2.43
168 169 3.438087 TCGTGTGGTTAGCAGTACTCTAC 59.562 47.826 0.00 0.00 0.00 2.59
169 170 3.439476 CGTGTGGTTAGCAGTACTCTACT 59.561 47.826 0.00 0.00 40.28 2.57
170 171 4.633126 CGTGTGGTTAGCAGTACTCTACTA 59.367 45.833 0.00 0.00 37.23 1.82
171 172 5.447010 CGTGTGGTTAGCAGTACTCTACTAC 60.447 48.000 0.00 0.00 37.23 2.73
172 173 4.946157 TGTGGTTAGCAGTACTCTACTACC 59.054 45.833 0.00 4.70 37.23 3.18
173 174 4.946157 GTGGTTAGCAGTACTCTACTACCA 59.054 45.833 15.06 15.06 37.23 3.25
174 175 5.593502 GTGGTTAGCAGTACTCTACTACCAT 59.406 44.000 18.63 0.00 37.23 3.55
175 176 6.096564 GTGGTTAGCAGTACTCTACTACCATT 59.903 42.308 18.63 0.00 37.23 3.16
176 177 7.284034 GTGGTTAGCAGTACTCTACTACCATTA 59.716 40.741 18.63 4.79 37.23 1.90
177 178 7.501559 TGGTTAGCAGTACTCTACTACCATTAG 59.498 40.741 15.06 0.00 37.23 1.73
178 179 7.718753 GGTTAGCAGTACTCTACTACCATTAGA 59.281 40.741 13.13 0.00 37.23 2.10
179 180 9.287373 GTTAGCAGTACTCTACTACCATTAGAT 57.713 37.037 0.00 0.00 37.23 1.98
180 181 7.753309 AGCAGTACTCTACTACCATTAGATG 57.247 40.000 0.00 0.00 37.23 2.90
181 182 6.207810 AGCAGTACTCTACTACCATTAGATGC 59.792 42.308 0.00 0.00 37.23 3.91
182 183 6.604012 CAGTACTCTACTACCATTAGATGCG 58.396 44.000 0.00 0.00 37.23 4.73
183 184 6.205076 CAGTACTCTACTACCATTAGATGCGT 59.795 42.308 0.00 0.00 37.23 5.24
184 185 5.692613 ACTCTACTACCATTAGATGCGTC 57.307 43.478 0.00 0.00 0.00 5.19
185 186 5.378332 ACTCTACTACCATTAGATGCGTCT 58.622 41.667 14.07 14.07 38.52 4.18
186 187 5.239744 ACTCTACTACCATTAGATGCGTCTG 59.760 44.000 18.98 4.06 35.87 3.51
187 188 3.735237 ACTACCATTAGATGCGTCTGG 57.265 47.619 18.98 14.24 35.87 3.86
188 189 3.296854 ACTACCATTAGATGCGTCTGGA 58.703 45.455 18.98 7.46 35.87 3.86
189 190 3.704566 ACTACCATTAGATGCGTCTGGAA 59.295 43.478 18.98 6.14 35.87 3.53
190 191 3.627395 ACCATTAGATGCGTCTGGAAA 57.373 42.857 18.98 5.38 35.87 3.13
191 192 3.535561 ACCATTAGATGCGTCTGGAAAG 58.464 45.455 18.98 2.90 35.87 2.62
192 193 2.874701 CCATTAGATGCGTCTGGAAAGG 59.125 50.000 18.98 8.35 35.87 3.11
193 194 2.024176 TTAGATGCGTCTGGAAAGGC 57.976 50.000 18.98 0.00 35.87 4.35
194 195 1.195115 TAGATGCGTCTGGAAAGGCT 58.805 50.000 18.98 0.00 35.87 4.58
195 196 0.326264 AGATGCGTCTGGAAAGGCTT 59.674 50.000 7.89 0.00 32.13 4.35
196 197 1.168714 GATGCGTCTGGAAAGGCTTT 58.831 50.000 13.25 13.25 0.00 3.51
197 198 2.027192 AGATGCGTCTGGAAAGGCTTTA 60.027 45.455 13.37 0.00 32.13 1.85
198 199 2.264005 TGCGTCTGGAAAGGCTTTAA 57.736 45.000 13.37 3.56 0.00 1.52
199 200 2.790433 TGCGTCTGGAAAGGCTTTAAT 58.210 42.857 13.37 0.00 0.00 1.40
200 201 3.153919 TGCGTCTGGAAAGGCTTTAATT 58.846 40.909 13.37 0.00 0.00 1.40
201 202 3.057596 TGCGTCTGGAAAGGCTTTAATTG 60.058 43.478 13.37 4.14 0.00 2.32
202 203 3.057526 GCGTCTGGAAAGGCTTTAATTGT 60.058 43.478 13.37 0.00 0.00 2.71
203 204 4.723248 CGTCTGGAAAGGCTTTAATTGTC 58.277 43.478 13.37 0.00 0.00 3.18
204 205 4.379499 CGTCTGGAAAGGCTTTAATTGTCC 60.379 45.833 13.37 9.42 0.00 4.02
205 206 4.767409 GTCTGGAAAGGCTTTAATTGTCCT 59.233 41.667 13.37 0.00 0.00 3.85
206 207 4.766891 TCTGGAAAGGCTTTAATTGTCCTG 59.233 41.667 13.37 12.41 0.00 3.86
207 208 4.479158 TGGAAAGGCTTTAATTGTCCTGT 58.521 39.130 13.37 0.00 0.00 4.00
208 209 4.898861 TGGAAAGGCTTTAATTGTCCTGTT 59.101 37.500 13.37 0.00 0.00 3.16
209 210 5.365314 TGGAAAGGCTTTAATTGTCCTGTTT 59.635 36.000 13.37 0.00 0.00 2.83
210 211 6.551601 TGGAAAGGCTTTAATTGTCCTGTTTA 59.448 34.615 13.37 0.00 0.00 2.01
211 212 7.234577 TGGAAAGGCTTTAATTGTCCTGTTTAT 59.765 33.333 13.37 0.00 0.00 1.40
212 213 8.094548 GGAAAGGCTTTAATTGTCCTGTTTATT 58.905 33.333 13.37 0.00 0.00 1.40
213 214 9.489084 GAAAGGCTTTAATTGTCCTGTTTATTT 57.511 29.630 13.37 0.00 0.00 1.40
214 215 8.831715 AAGGCTTTAATTGTCCTGTTTATTTG 57.168 30.769 0.00 0.00 0.00 2.32
215 216 6.873605 AGGCTTTAATTGTCCTGTTTATTTGC 59.126 34.615 0.00 0.00 0.00 3.68
216 217 6.873605 GGCTTTAATTGTCCTGTTTATTTGCT 59.126 34.615 0.00 0.00 0.00 3.91
217 218 7.063426 GGCTTTAATTGTCCTGTTTATTTGCTC 59.937 37.037 0.00 0.00 0.00 4.26
218 219 7.063426 GCTTTAATTGTCCTGTTTATTTGCTCC 59.937 37.037 0.00 0.00 0.00 4.70
219 220 5.405935 AATTGTCCTGTTTATTTGCTCCC 57.594 39.130 0.00 0.00 0.00 4.30
220 221 3.517296 TGTCCTGTTTATTTGCTCCCA 57.483 42.857 0.00 0.00 0.00 4.37
221 222 4.046286 TGTCCTGTTTATTTGCTCCCAT 57.954 40.909 0.00 0.00 0.00 4.00
222 223 3.763360 TGTCCTGTTTATTTGCTCCCATG 59.237 43.478 0.00 0.00 0.00 3.66
223 224 3.763897 GTCCTGTTTATTTGCTCCCATGT 59.236 43.478 0.00 0.00 0.00 3.21
224 225 3.763360 TCCTGTTTATTTGCTCCCATGTG 59.237 43.478 0.00 0.00 0.00 3.21
225 226 3.511146 CCTGTTTATTTGCTCCCATGTGT 59.489 43.478 0.00 0.00 0.00 3.72
226 227 4.380867 CCTGTTTATTTGCTCCCATGTGTC 60.381 45.833 0.00 0.00 0.00 3.67
227 228 4.406456 TGTTTATTTGCTCCCATGTGTCT 58.594 39.130 0.00 0.00 0.00 3.41
228 229 4.218200 TGTTTATTTGCTCCCATGTGTCTG 59.782 41.667 0.00 0.00 0.00 3.51
229 230 2.592102 ATTTGCTCCCATGTGTCTGT 57.408 45.000 0.00 0.00 0.00 3.41
230 231 2.363306 TTTGCTCCCATGTGTCTGTT 57.637 45.000 0.00 0.00 0.00 3.16
231 232 2.363306 TTGCTCCCATGTGTCTGTTT 57.637 45.000 0.00 0.00 0.00 2.83
232 233 1.896220 TGCTCCCATGTGTCTGTTTC 58.104 50.000 0.00 0.00 0.00 2.78
233 234 1.168714 GCTCCCATGTGTCTGTTTCC 58.831 55.000 0.00 0.00 0.00 3.13
234 235 1.826385 CTCCCATGTGTCTGTTTCCC 58.174 55.000 0.00 0.00 0.00 3.97
235 236 1.073763 CTCCCATGTGTCTGTTTCCCA 59.926 52.381 0.00 0.00 0.00 4.37
236 237 1.202879 TCCCATGTGTCTGTTTCCCAC 60.203 52.381 0.00 0.00 0.00 4.61
237 238 1.478471 CCCATGTGTCTGTTTCCCACA 60.478 52.381 0.00 0.00 42.70 4.17
238 239 1.608590 CCATGTGTCTGTTTCCCACAC 59.391 52.381 0.00 0.00 41.47 3.82
240 241 2.727123 TGTGTCTGTTTCCCACACAT 57.273 45.000 0.02 0.00 44.26 3.21
241 242 2.571212 TGTGTCTGTTTCCCACACATC 58.429 47.619 0.02 0.00 44.26 3.06
242 243 2.092699 TGTGTCTGTTTCCCACACATCA 60.093 45.455 0.02 0.00 44.26 3.07
243 244 3.149196 GTGTCTGTTTCCCACACATCAT 58.851 45.455 0.00 0.00 40.22 2.45
244 245 3.189287 GTGTCTGTTTCCCACACATCATC 59.811 47.826 0.00 0.00 40.22 2.92
245 246 2.749621 GTCTGTTTCCCACACATCATCC 59.250 50.000 0.00 0.00 0.00 3.51
246 247 1.739466 CTGTTTCCCACACATCATCCG 59.261 52.381 0.00 0.00 0.00 4.18
247 248 1.094785 GTTTCCCACACATCATCCGG 58.905 55.000 0.00 0.00 0.00 5.14
248 249 0.988063 TTTCCCACACATCATCCGGA 59.012 50.000 6.61 6.61 0.00 5.14
249 250 0.988063 TTCCCACACATCATCCGGAA 59.012 50.000 9.01 0.00 0.00 4.30
250 251 0.251916 TCCCACACATCATCCGGAAC 59.748 55.000 9.01 0.00 0.00 3.62
251 252 0.253044 CCCACACATCATCCGGAACT 59.747 55.000 9.01 0.00 0.00 3.01
252 253 1.484653 CCCACACATCATCCGGAACTA 59.515 52.381 9.01 0.00 0.00 2.24
253 254 2.550978 CCACACATCATCCGGAACTAC 58.449 52.381 9.01 0.00 0.00 2.73
254 255 2.168521 CCACACATCATCCGGAACTACT 59.831 50.000 9.01 0.00 0.00 2.57
255 256 3.383505 CCACACATCATCCGGAACTACTA 59.616 47.826 9.01 0.00 0.00 1.82
256 257 4.499865 CCACACATCATCCGGAACTACTAG 60.500 50.000 9.01 0.00 0.00 2.57
257 258 3.637229 ACACATCATCCGGAACTACTAGG 59.363 47.826 9.01 0.00 0.00 3.02
258 259 3.637229 CACATCATCCGGAACTACTAGGT 59.363 47.826 9.01 0.00 0.00 3.08
259 260 4.825634 CACATCATCCGGAACTACTAGGTA 59.174 45.833 9.01 0.00 0.00 3.08
260 261 5.477291 CACATCATCCGGAACTACTAGGTAT 59.523 44.000 9.01 0.00 0.00 2.73
261 262 5.711036 ACATCATCCGGAACTACTAGGTATC 59.289 44.000 9.01 0.00 0.00 2.24
262 263 5.579753 TCATCCGGAACTACTAGGTATCT 57.420 43.478 9.01 0.00 0.00 1.98
263 264 5.558818 TCATCCGGAACTACTAGGTATCTC 58.441 45.833 9.01 0.00 0.00 2.75
264 265 5.310068 TCATCCGGAACTACTAGGTATCTCT 59.690 44.000 9.01 0.00 0.00 3.10
265 266 5.643421 TCCGGAACTACTAGGTATCTCTT 57.357 43.478 0.00 0.00 0.00 2.85
266 267 6.011122 TCCGGAACTACTAGGTATCTCTTT 57.989 41.667 0.00 0.00 0.00 2.52
267 268 6.430007 TCCGGAACTACTAGGTATCTCTTTT 58.570 40.000 0.00 0.00 0.00 2.27
268 269 6.320672 TCCGGAACTACTAGGTATCTCTTTTG 59.679 42.308 0.00 0.00 0.00 2.44
269 270 5.978322 CGGAACTACTAGGTATCTCTTTTGC 59.022 44.000 0.00 0.00 0.00 3.68
270 271 6.405508 CGGAACTACTAGGTATCTCTTTTGCA 60.406 42.308 0.00 0.00 0.00 4.08
271 272 7.328737 GGAACTACTAGGTATCTCTTTTGCAA 58.671 38.462 0.00 0.00 0.00 4.08
272 273 7.278203 GGAACTACTAGGTATCTCTTTTGCAAC 59.722 40.741 0.00 0.00 0.00 4.17
273 274 7.241042 ACTACTAGGTATCTCTTTTGCAACA 57.759 36.000 0.00 0.00 0.00 3.33
274 275 7.324178 ACTACTAGGTATCTCTTTTGCAACAG 58.676 38.462 6.25 6.25 0.00 3.16
275 276 6.360370 ACTAGGTATCTCTTTTGCAACAGA 57.640 37.500 14.34 14.34 0.00 3.41
276 277 6.769512 ACTAGGTATCTCTTTTGCAACAGAA 58.230 36.000 15.74 8.02 0.00 3.02
277 278 7.224297 ACTAGGTATCTCTTTTGCAACAGAAA 58.776 34.615 15.74 3.87 0.00 2.52
278 279 6.959639 AGGTATCTCTTTTGCAACAGAAAA 57.040 33.333 15.74 8.03 0.00 2.29
279 280 7.530426 AGGTATCTCTTTTGCAACAGAAAAT 57.470 32.000 15.74 13.76 0.00 1.82
280 281 7.597386 AGGTATCTCTTTTGCAACAGAAAATC 58.403 34.615 15.74 5.46 0.00 2.17
281 282 7.231317 AGGTATCTCTTTTGCAACAGAAAATCA 59.769 33.333 15.74 0.00 0.00 2.57
282 283 7.327032 GGTATCTCTTTTGCAACAGAAAATCAC 59.673 37.037 15.74 9.39 0.00 3.06
283 284 6.455360 TCTCTTTTGCAACAGAAAATCACT 57.545 33.333 15.74 0.00 0.00 3.41
284 285 6.866480 TCTCTTTTGCAACAGAAAATCACTT 58.134 32.000 15.74 0.00 0.00 3.16
285 286 7.995289 TCTCTTTTGCAACAGAAAATCACTTA 58.005 30.769 15.74 0.00 0.00 2.24
286 287 8.632679 TCTCTTTTGCAACAGAAAATCACTTAT 58.367 29.630 15.74 0.00 0.00 1.73
287 288 8.801715 TCTTTTGCAACAGAAAATCACTTATC 57.198 30.769 12.82 0.00 0.00 1.75
288 289 8.632679 TCTTTTGCAACAGAAAATCACTTATCT 58.367 29.630 12.82 0.00 0.00 1.98
289 290 9.252962 CTTTTGCAACAGAAAATCACTTATCTT 57.747 29.630 6.78 0.00 0.00 2.40
290 291 8.801715 TTTGCAACAGAAAATCACTTATCTTC 57.198 30.769 0.00 0.00 0.00 2.87
291 292 7.750229 TGCAACAGAAAATCACTTATCTTCT 57.250 32.000 0.00 0.00 0.00 2.85
292 293 8.169977 TGCAACAGAAAATCACTTATCTTCTT 57.830 30.769 0.00 0.00 0.00 2.52
293 294 8.292448 TGCAACAGAAAATCACTTATCTTCTTC 58.708 33.333 0.00 0.00 0.00 2.87
294 295 7.752686 GCAACAGAAAATCACTTATCTTCTTCC 59.247 37.037 0.00 0.00 0.00 3.46
295 296 7.929941 ACAGAAAATCACTTATCTTCTTCCC 57.070 36.000 0.00 0.00 0.00 3.97
296 297 6.887002 ACAGAAAATCACTTATCTTCTTCCCC 59.113 38.462 0.00 0.00 0.00 4.81
297 298 6.886459 CAGAAAATCACTTATCTTCTTCCCCA 59.114 38.462 0.00 0.00 0.00 4.96
298 299 6.887002 AGAAAATCACTTATCTTCTTCCCCAC 59.113 38.462 0.00 0.00 0.00 4.61
299 300 5.779241 AATCACTTATCTTCTTCCCCACA 57.221 39.130 0.00 0.00 0.00 4.17
300 301 5.983333 ATCACTTATCTTCTTCCCCACAT 57.017 39.130 0.00 0.00 0.00 3.21
301 302 5.359194 TCACTTATCTTCTTCCCCACATC 57.641 43.478 0.00 0.00 0.00 3.06
302 303 4.782691 TCACTTATCTTCTTCCCCACATCA 59.217 41.667 0.00 0.00 0.00 3.07
303 304 5.429762 TCACTTATCTTCTTCCCCACATCAT 59.570 40.000 0.00 0.00 0.00 2.45
304 305 6.615316 TCACTTATCTTCTTCCCCACATCATA 59.385 38.462 0.00 0.00 0.00 2.15
305 306 6.708054 CACTTATCTTCTTCCCCACATCATAC 59.292 42.308 0.00 0.00 0.00 2.39
306 307 6.617371 ACTTATCTTCTTCCCCACATCATACT 59.383 38.462 0.00 0.00 0.00 2.12
307 308 5.559148 ATCTTCTTCCCCACATCATACTC 57.441 43.478 0.00 0.00 0.00 2.59
308 309 3.711704 TCTTCTTCCCCACATCATACTCC 59.288 47.826 0.00 0.00 0.00 3.85
309 310 3.421394 TCTTCCCCACATCATACTCCT 57.579 47.619 0.00 0.00 0.00 3.69
310 311 3.041211 TCTTCCCCACATCATACTCCTG 58.959 50.000 0.00 0.00 0.00 3.86
311 312 1.131638 TCCCCACATCATACTCCTGC 58.868 55.000 0.00 0.00 0.00 4.85
312 313 0.839277 CCCCACATCATACTCCTGCA 59.161 55.000 0.00 0.00 0.00 4.41
313 314 1.422781 CCCCACATCATACTCCTGCAT 59.577 52.381 0.00 0.00 0.00 3.96
314 315 2.158564 CCCCACATCATACTCCTGCATT 60.159 50.000 0.00 0.00 0.00 3.56
315 316 3.559069 CCCACATCATACTCCTGCATTT 58.441 45.455 0.00 0.00 0.00 2.32
316 317 3.317149 CCCACATCATACTCCTGCATTTG 59.683 47.826 0.00 0.00 0.00 2.32
317 318 4.201657 CCACATCATACTCCTGCATTTGA 58.798 43.478 0.00 0.00 0.00 2.69
318 319 4.825634 CCACATCATACTCCTGCATTTGAT 59.174 41.667 0.00 0.00 0.00 2.57
319 320 5.048921 CCACATCATACTCCTGCATTTGATC 60.049 44.000 0.00 0.00 0.00 2.92
320 321 5.529800 CACATCATACTCCTGCATTTGATCA 59.470 40.000 0.00 0.00 0.00 2.92
321 322 6.038936 CACATCATACTCCTGCATTTGATCAA 59.961 38.462 3.38 3.38 0.00 2.57
322 323 6.039047 ACATCATACTCCTGCATTTGATCAAC 59.961 38.462 7.89 0.00 0.00 3.18
323 324 5.748402 TCATACTCCTGCATTTGATCAACT 58.252 37.500 7.89 0.00 0.00 3.16
324 325 6.182627 TCATACTCCTGCATTTGATCAACTT 58.817 36.000 7.89 0.00 0.00 2.66
325 326 4.778534 ACTCCTGCATTTGATCAACTTG 57.221 40.909 7.89 10.16 0.00 3.16
326 327 3.057033 ACTCCTGCATTTGATCAACTTGC 60.057 43.478 25.32 25.32 33.02 4.01
327 328 3.159472 TCCTGCATTTGATCAACTTGCT 58.841 40.909 28.97 6.14 33.36 3.91
328 329 3.192001 TCCTGCATTTGATCAACTTGCTC 59.808 43.478 28.97 12.78 33.36 4.26
329 330 3.057104 CCTGCATTTGATCAACTTGCTCA 60.057 43.478 28.97 17.05 33.36 4.26
330 331 4.381612 CCTGCATTTGATCAACTTGCTCAT 60.382 41.667 28.97 11.01 33.36 2.90
331 332 4.740268 TGCATTTGATCAACTTGCTCATC 58.260 39.130 28.97 11.78 33.36 2.92
332 333 3.789756 GCATTTGATCAACTTGCTCATCG 59.210 43.478 25.00 4.04 30.99 3.84
333 334 4.673580 GCATTTGATCAACTTGCTCATCGT 60.674 41.667 25.00 0.00 30.99 3.73
334 335 5.396484 CATTTGATCAACTTGCTCATCGTT 58.604 37.500 7.89 0.00 0.00 3.85
335 336 4.408993 TTGATCAACTTGCTCATCGTTG 57.591 40.909 3.38 0.00 39.38 4.10
336 337 2.743664 TGATCAACTTGCTCATCGTTGG 59.256 45.455 0.00 0.00 38.74 3.77
337 338 0.874390 TCAACTTGCTCATCGTTGGC 59.126 50.000 0.00 0.00 38.74 4.52
338 339 0.109597 CAACTTGCTCATCGTTGGCC 60.110 55.000 0.00 0.00 35.57 5.36
339 340 1.244019 AACTTGCTCATCGTTGGCCC 61.244 55.000 0.00 0.00 0.00 5.80
340 341 2.361104 TTGCTCATCGTTGGCCCC 60.361 61.111 0.00 0.00 0.00 5.80
341 342 3.936772 TTGCTCATCGTTGGCCCCC 62.937 63.158 0.00 0.00 0.00 5.40
342 343 4.424711 GCTCATCGTTGGCCCCCA 62.425 66.667 0.00 0.00 0.00 4.96
343 344 2.597340 CTCATCGTTGGCCCCCAT 59.403 61.111 0.00 0.00 31.53 4.00
344 345 1.076777 CTCATCGTTGGCCCCCATT 60.077 57.895 0.00 0.00 31.53 3.16
345 346 0.182537 CTCATCGTTGGCCCCCATTA 59.817 55.000 0.00 0.00 31.53 1.90
346 347 0.850100 TCATCGTTGGCCCCCATTAT 59.150 50.000 0.00 0.00 31.53 1.28
347 348 1.216678 TCATCGTTGGCCCCCATTATT 59.783 47.619 0.00 0.00 31.53 1.40
348 349 2.038659 CATCGTTGGCCCCCATTATTT 58.961 47.619 0.00 0.00 31.53 1.40
349 350 1.479709 TCGTTGGCCCCCATTATTTG 58.520 50.000 0.00 0.00 31.53 2.32
350 351 0.179086 CGTTGGCCCCCATTATTTGC 60.179 55.000 0.00 0.00 31.53 3.68
351 352 1.203237 GTTGGCCCCCATTATTTGCT 58.797 50.000 0.00 0.00 31.53 3.91
352 353 1.559219 GTTGGCCCCCATTATTTGCTT 59.441 47.619 0.00 0.00 31.53 3.91
353 354 1.494960 TGGCCCCCATTATTTGCTTC 58.505 50.000 0.00 0.00 0.00 3.86
354 355 1.008206 TGGCCCCCATTATTTGCTTCT 59.992 47.619 0.00 0.00 0.00 2.85
355 356 2.246067 TGGCCCCCATTATTTGCTTCTA 59.754 45.455 0.00 0.00 0.00 2.10
463 467 8.646004 TGGATCGAGATGAGATCTAGAAAATTT 58.354 33.333 0.00 0.00 42.83 1.82
674 678 1.929230 CAGTCGTGTGTTGTGGTGTA 58.071 50.000 0.00 0.00 0.00 2.90
1027 1096 7.768582 TGTCAGAACAATCTAAAGACAAGTCAA 59.231 33.333 2.72 0.00 34.80 3.18
1031 1100 5.316987 ACAATCTAAAGACAAGTCAAGGGG 58.683 41.667 2.72 0.00 0.00 4.79
1513 1582 3.780850 CCCCCATGAAGACCTTTAGTACT 59.219 47.826 0.00 0.00 0.00 2.73
1606 1676 4.101119 AGGCAGTATGAGCGGTTTATAAGT 59.899 41.667 0.00 0.00 39.69 2.24
1717 1787 2.433604 AGCTATGTGCAGTGCAGTCTAT 59.566 45.455 20.42 12.95 45.94 1.98
1876 1947 6.790282 TCTGACATCATTTGTTGTTTTTCGA 58.210 32.000 0.00 0.00 39.18 3.71
1919 1990 6.640518 AGAGAGCTAAATGACCGTGAAATTA 58.359 36.000 0.00 0.00 0.00 1.40
2162 2234 5.590259 ACTTCTTTTGTGTTCAGTATGCAGT 59.410 36.000 0.00 0.00 34.76 4.40
2258 2330 7.324935 TGTTCAATATGCAGCATTCAATTTCT 58.675 30.769 14.58 0.00 0.00 2.52
2472 2548 3.644606 CAGTGGGCCTGCCAGACT 61.645 66.667 10.86 8.28 37.98 3.24
2569 2645 5.004361 AGCCTGCTATATAGAGGAGTTCA 57.996 43.478 22.44 7.68 33.27 3.18
2651 2727 1.216930 ACTAAACTTTGGGGTGGCAGT 59.783 47.619 0.00 0.00 0.00 4.40
2765 2884 1.921346 TGGTGGCTCCAACCGGTAT 60.921 57.895 8.00 0.00 44.12 2.73
2771 2890 2.572556 TGGCTCCAACCGGTATTAAAGA 59.427 45.455 8.00 0.00 0.00 2.52
3892 4449 3.517296 TTTCCTTGTTGATGGTAGGCA 57.483 42.857 0.00 0.00 0.00 4.75
4121 4678 4.642429 AGTTTACTTGAAGACGGAGCATT 58.358 39.130 0.00 0.00 0.00 3.56
4172 4733 5.506730 TGGAGACACATACACCCATTTTA 57.493 39.130 0.00 0.00 33.40 1.52
4233 4794 1.915489 TGAGCCTGGTATGGTTGTCAT 59.085 47.619 0.00 0.00 39.78 3.06
4362 4923 9.850628 GCATGCATATGTTTATGTCTTTGATAT 57.149 29.630 14.21 0.00 37.99 1.63
4416 4977 9.974980 ATTTGTATTGTCAGTTTATTTCGGTTT 57.025 25.926 0.00 0.00 0.00 3.27
4442 5003 1.743623 CATGTCCGGCGCTTGGTAA 60.744 57.895 16.85 8.53 0.00 2.85
4446 5007 1.003112 TCCGGCGCTTGGTAAACAT 60.003 52.632 16.85 0.00 0.00 2.71
4620 5184 7.576861 TGAACTACGGTCACATCTATAATCA 57.423 36.000 0.00 0.00 0.00 2.57
4810 5374 2.092646 TCAATGGTTAGCTTACGGCCAT 60.093 45.455 2.24 0.00 43.05 4.40
5074 5643 2.209690 TGTCTCATGTCCGTGTCCTA 57.790 50.000 0.00 0.00 0.00 2.94
5108 5677 6.714356 TGTTGGTGATGATTATGTTGAACTCA 59.286 34.615 0.00 0.00 0.00 3.41
5702 6320 4.102210 TGGGAAATCAAACAAAATGCAGGA 59.898 37.500 0.00 0.00 0.00 3.86
5752 6370 4.157246 TCTAAGTCAGGGCACAAAGTCTA 58.843 43.478 0.00 0.00 0.00 2.59
5918 6536 0.036388 CAGGAGCTTAACCTTCGGCA 60.036 55.000 0.00 0.00 35.35 5.69
6043 6661 2.432456 GTGCAGATGACCGTGCGA 60.432 61.111 0.00 0.00 42.96 5.10
6149 6767 4.927267 AAGGACACACAAAGGATGGATA 57.073 40.909 0.00 0.00 0.00 2.59
6157 6775 6.947733 ACACACAAAGGATGGATATTTTGAGA 59.052 34.615 3.15 0.00 35.21 3.27
6165 6783 5.105473 GGATGGATATTTTGAGATGCATGGG 60.105 44.000 2.46 0.00 34.63 4.00
6501 7120 8.995220 TGTTTGTATCTTATACACCTTGTTCAC 58.005 33.333 0.00 0.00 0.00 3.18
6603 7222 6.413783 TGTCTTTACCTCATGTTCTACACA 57.586 37.500 0.00 0.00 40.71 3.72
6810 7430 6.942005 TGTATCATGTTTGTCTTCCTGTCAAT 59.058 34.615 0.00 0.00 0.00 2.57
6968 7588 6.254522 GGGCTCTTATCCTAGTATTGGTCTA 58.745 44.000 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.456566 TCATGTGTGATGTGGATGAGTTTG 59.543 41.667 0.00 0.00 0.00 2.93
7 8 3.602483 TCTGTCATGTGTGATGTGGATG 58.398 45.455 0.00 0.00 36.60 3.51
9 10 3.516700 AGATCTGTCATGTGTGATGTGGA 59.483 43.478 0.00 0.00 36.60 4.02
10 11 3.870274 AGATCTGTCATGTGTGATGTGG 58.130 45.455 0.00 0.00 36.60 4.17
11 12 5.874895 AAAGATCTGTCATGTGTGATGTG 57.125 39.130 0.00 0.00 36.60 3.21
12 13 5.766670 ACAAAAGATCTGTCATGTGTGATGT 59.233 36.000 0.00 0.00 36.60 3.06
13 14 6.250344 ACAAAAGATCTGTCATGTGTGATG 57.750 37.500 0.00 0.00 36.60 3.07
14 15 7.825761 TCATACAAAAGATCTGTCATGTGTGAT 59.174 33.333 17.77 0.00 34.37 3.06
15 16 7.160726 TCATACAAAAGATCTGTCATGTGTGA 58.839 34.615 17.77 17.77 35.56 3.58
16 17 7.368480 TCATACAAAAGATCTGTCATGTGTG 57.632 36.000 15.11 15.11 32.94 3.82
17 18 7.066645 CCATCATACAAAAGATCTGTCATGTGT 59.933 37.037 0.00 0.00 0.00 3.72
18 19 7.066645 ACCATCATACAAAAGATCTGTCATGTG 59.933 37.037 0.00 0.00 0.00 3.21
19 20 7.114754 ACCATCATACAAAAGATCTGTCATGT 58.885 34.615 0.00 2.18 0.00 3.21
20 21 7.563888 ACCATCATACAAAAGATCTGTCATG 57.436 36.000 0.00 0.00 0.00 3.07
21 22 9.685276 TTTACCATCATACAAAAGATCTGTCAT 57.315 29.630 0.00 0.00 0.00 3.06
22 23 9.166173 CTTTACCATCATACAAAAGATCTGTCA 57.834 33.333 0.00 0.00 30.44 3.58
23 24 8.125448 GCTTTACCATCATACAAAAGATCTGTC 58.875 37.037 0.00 0.00 30.44 3.51
24 25 7.831193 AGCTTTACCATCATACAAAAGATCTGT 59.169 33.333 0.00 0.00 30.44 3.41
25 26 8.218338 AGCTTTACCATCATACAAAAGATCTG 57.782 34.615 0.00 0.00 30.44 2.90
26 27 8.814038 AAGCTTTACCATCATACAAAAGATCT 57.186 30.769 0.00 0.00 30.44 2.75
27 28 9.294030 CAAAGCTTTACCATCATACAAAAGATC 57.706 33.333 12.25 0.00 30.44 2.75
28 29 7.761249 GCAAAGCTTTACCATCATACAAAAGAT 59.239 33.333 12.25 0.00 30.44 2.40
29 30 7.039784 AGCAAAGCTTTACCATCATACAAAAGA 60.040 33.333 12.25 0.00 33.89 2.52
30 31 7.092716 AGCAAAGCTTTACCATCATACAAAAG 58.907 34.615 12.25 0.00 33.89 2.27
31 32 6.991938 AGCAAAGCTTTACCATCATACAAAA 58.008 32.000 12.25 0.00 33.89 2.44
32 33 6.588719 AGCAAAGCTTTACCATCATACAAA 57.411 33.333 12.25 0.00 33.89 2.83
33 34 6.884295 AGTAGCAAAGCTTTACCATCATACAA 59.116 34.615 12.25 0.00 40.44 2.41
34 35 6.414732 AGTAGCAAAGCTTTACCATCATACA 58.585 36.000 12.25 0.00 40.44 2.29
35 36 6.927294 AGTAGCAAAGCTTTACCATCATAC 57.073 37.500 12.25 4.69 40.44 2.39
36 37 9.456147 TTTTAGTAGCAAAGCTTTACCATCATA 57.544 29.630 12.25 0.00 40.44 2.15
37 38 7.938140 TTTAGTAGCAAAGCTTTACCATCAT 57.062 32.000 12.25 0.00 40.44 2.45
38 39 7.753309 TTTTAGTAGCAAAGCTTTACCATCA 57.247 32.000 12.25 0.00 40.44 3.07
39 40 8.297426 ACTTTTTAGTAGCAAAGCTTTACCATC 58.703 33.333 12.25 2.27 40.44 3.51
40 41 8.178313 ACTTTTTAGTAGCAAAGCTTTACCAT 57.822 30.769 12.25 0.78 40.44 3.55
41 42 7.576861 ACTTTTTAGTAGCAAAGCTTTACCA 57.423 32.000 12.25 0.00 40.44 3.25
42 43 7.594015 GGAACTTTTTAGTAGCAAAGCTTTACC 59.406 37.037 12.25 6.16 40.44 2.85
43 44 7.594015 GGGAACTTTTTAGTAGCAAAGCTTTAC 59.406 37.037 12.25 6.31 40.44 2.01
44 45 7.285858 TGGGAACTTTTTAGTAGCAAAGCTTTA 59.714 33.333 12.25 0.00 40.44 1.85
45 46 6.097696 TGGGAACTTTTTAGTAGCAAAGCTTT 59.902 34.615 5.69 5.69 40.44 3.51
46 47 5.596772 TGGGAACTTTTTAGTAGCAAAGCTT 59.403 36.000 0.00 0.00 40.44 3.74
47 48 5.137551 TGGGAACTTTTTAGTAGCAAAGCT 58.862 37.500 0.00 0.00 43.41 3.74
48 49 5.447624 TGGGAACTTTTTAGTAGCAAAGC 57.552 39.130 4.54 0.00 33.92 3.51
49 50 7.039313 AGTTGGGAACTTTTTAGTAGCAAAG 57.961 36.000 0.00 3.46 39.04 2.77
63 64 5.946486 AGATGAAGAGAAAAGTTGGGAACT 58.054 37.500 0.00 0.00 45.46 3.01
64 65 7.445707 ACTTAGATGAAGAGAAAAGTTGGGAAC 59.554 37.037 0.00 0.00 38.65 3.62
65 66 7.445402 CACTTAGATGAAGAGAAAAGTTGGGAA 59.555 37.037 0.00 0.00 38.65 3.97
66 67 6.936900 CACTTAGATGAAGAGAAAAGTTGGGA 59.063 38.462 0.00 0.00 38.65 4.37
67 68 6.348868 GCACTTAGATGAAGAGAAAAGTTGGG 60.349 42.308 0.00 0.00 38.65 4.12
68 69 6.429385 AGCACTTAGATGAAGAGAAAAGTTGG 59.571 38.462 0.00 0.00 38.65 3.77
69 70 7.432350 AGCACTTAGATGAAGAGAAAAGTTG 57.568 36.000 0.00 0.00 38.65 3.16
70 71 7.716998 TGAAGCACTTAGATGAAGAGAAAAGTT 59.283 33.333 0.00 0.00 38.65 2.66
71 72 7.220030 TGAAGCACTTAGATGAAGAGAAAAGT 58.780 34.615 0.00 0.00 38.65 2.66
72 73 7.664082 TGAAGCACTTAGATGAAGAGAAAAG 57.336 36.000 0.00 0.00 38.65 2.27
73 74 8.450578 TTTGAAGCACTTAGATGAAGAGAAAA 57.549 30.769 0.00 0.00 38.65 2.29
74 75 8.345565 GTTTTGAAGCACTTAGATGAAGAGAAA 58.654 33.333 0.00 0.00 38.65 2.52
75 76 7.498900 TGTTTTGAAGCACTTAGATGAAGAGAA 59.501 33.333 0.00 0.00 38.65 2.87
76 77 6.992123 TGTTTTGAAGCACTTAGATGAAGAGA 59.008 34.615 0.00 0.00 38.65 3.10
77 78 7.194607 TGTTTTGAAGCACTTAGATGAAGAG 57.805 36.000 0.00 0.00 38.65 2.85
78 79 7.445096 TCATGTTTTGAAGCACTTAGATGAAGA 59.555 33.333 0.00 0.00 38.65 2.87
79 80 7.587629 TCATGTTTTGAAGCACTTAGATGAAG 58.412 34.615 0.00 0.00 41.37 3.02
80 81 7.509141 TCATGTTTTGAAGCACTTAGATGAA 57.491 32.000 0.00 0.00 0.00 2.57
81 82 7.013178 TGTTCATGTTTTGAAGCACTTAGATGA 59.987 33.333 0.00 0.00 44.89 2.92
82 83 7.140705 TGTTCATGTTTTGAAGCACTTAGATG 58.859 34.615 0.00 0.00 44.89 2.90
83 84 7.275888 TGTTCATGTTTTGAAGCACTTAGAT 57.724 32.000 0.00 0.00 44.89 1.98
84 85 6.691754 TGTTCATGTTTTGAAGCACTTAGA 57.308 33.333 0.00 0.00 44.89 2.10
85 86 6.364165 CCATGTTCATGTTTTGAAGCACTTAG 59.636 38.462 11.13 0.00 44.89 2.18
86 87 6.215121 CCATGTTCATGTTTTGAAGCACTTA 58.785 36.000 11.13 0.00 44.89 2.24
87 88 5.051816 CCATGTTCATGTTTTGAAGCACTT 58.948 37.500 11.13 0.00 44.89 3.16
88 89 4.501915 CCCATGTTCATGTTTTGAAGCACT 60.502 41.667 11.13 0.00 44.89 4.40
89 90 3.742369 CCCATGTTCATGTTTTGAAGCAC 59.258 43.478 11.13 0.00 44.89 4.40
90 91 3.387374 ACCCATGTTCATGTTTTGAAGCA 59.613 39.130 11.13 0.00 44.89 3.91
91 92 3.993920 ACCCATGTTCATGTTTTGAAGC 58.006 40.909 11.13 0.00 44.89 3.86
92 93 4.751098 CCAACCCATGTTCATGTTTTGAAG 59.249 41.667 17.54 5.84 44.89 3.02
93 94 4.701765 CCAACCCATGTTCATGTTTTGAA 58.298 39.130 17.54 0.00 42.09 2.69
94 95 3.494048 GCCAACCCATGTTCATGTTTTGA 60.494 43.478 17.54 0.00 30.42 2.69
95 96 2.807392 GCCAACCCATGTTCATGTTTTG 59.193 45.455 11.13 12.00 30.42 2.44
96 97 2.437281 TGCCAACCCATGTTCATGTTTT 59.563 40.909 11.13 2.27 30.42 2.43
97 98 2.045524 TGCCAACCCATGTTCATGTTT 58.954 42.857 11.13 2.57 30.42 2.83
98 99 1.714541 TGCCAACCCATGTTCATGTT 58.285 45.000 11.13 0.00 30.42 2.71
99 100 1.826720 GATGCCAACCCATGTTCATGT 59.173 47.619 11.13 0.00 30.42 3.21
100 101 2.104967 AGATGCCAACCCATGTTCATG 58.895 47.619 5.88 5.88 30.42 3.07
101 102 2.104967 CAGATGCCAACCCATGTTCAT 58.895 47.619 0.00 0.00 30.42 2.57
102 103 1.075212 TCAGATGCCAACCCATGTTCA 59.925 47.619 0.00 0.00 30.42 3.18
103 104 1.838112 TCAGATGCCAACCCATGTTC 58.162 50.000 0.00 0.00 30.42 3.18
104 105 1.895131 GTTCAGATGCCAACCCATGTT 59.105 47.619 0.00 0.00 34.14 2.71
105 106 1.203038 TGTTCAGATGCCAACCCATGT 60.203 47.619 0.00 0.00 0.00 3.21
106 107 1.548081 TGTTCAGATGCCAACCCATG 58.452 50.000 0.00 0.00 0.00 3.66
107 108 2.104967 CATGTTCAGATGCCAACCCAT 58.895 47.619 0.00 0.00 0.00 4.00
108 109 1.075212 TCATGTTCAGATGCCAACCCA 59.925 47.619 0.00 0.00 0.00 4.51
109 110 1.838112 TCATGTTCAGATGCCAACCC 58.162 50.000 0.00 0.00 0.00 4.11
110 111 4.178540 CAAATCATGTTCAGATGCCAACC 58.821 43.478 0.00 0.00 0.00 3.77
111 112 3.615496 GCAAATCATGTTCAGATGCCAAC 59.385 43.478 0.00 0.00 0.00 3.77
112 113 3.258622 TGCAAATCATGTTCAGATGCCAA 59.741 39.130 0.00 0.00 0.00 4.52
113 114 2.826725 TGCAAATCATGTTCAGATGCCA 59.173 40.909 0.00 0.00 0.00 4.92
114 115 3.513680 TGCAAATCATGTTCAGATGCC 57.486 42.857 0.00 0.00 0.00 4.40
115 116 4.239304 TGTTGCAAATCATGTTCAGATGC 58.761 39.130 0.00 0.00 0.00 3.91
116 117 6.330278 AGATGTTGCAAATCATGTTCAGATG 58.670 36.000 17.89 0.00 0.00 2.90
117 118 6.525578 AGATGTTGCAAATCATGTTCAGAT 57.474 33.333 17.89 0.00 0.00 2.90
118 119 5.970317 AGATGTTGCAAATCATGTTCAGA 57.030 34.783 17.89 0.00 0.00 3.27
119 120 5.575606 GGAAGATGTTGCAAATCATGTTCAG 59.424 40.000 26.94 0.00 42.29 3.02
120 121 5.244402 AGGAAGATGTTGCAAATCATGTTCA 59.756 36.000 26.94 11.68 42.29 3.18
121 122 5.717119 AGGAAGATGTTGCAAATCATGTTC 58.283 37.500 21.96 21.96 40.88 3.18
122 123 5.733620 AGGAAGATGTTGCAAATCATGTT 57.266 34.783 10.92 10.92 31.83 2.71
123 124 5.733620 AAGGAAGATGTTGCAAATCATGT 57.266 34.783 17.89 8.51 0.00 3.21
124 125 5.287752 CGAAAGGAAGATGTTGCAAATCATG 59.712 40.000 17.89 0.00 0.00 3.07
125 126 5.047802 ACGAAAGGAAGATGTTGCAAATCAT 60.048 36.000 17.89 11.75 0.00 2.45
126 127 4.278170 ACGAAAGGAAGATGTTGCAAATCA 59.722 37.500 17.89 7.97 0.00 2.57
127 128 4.618489 CACGAAAGGAAGATGTTGCAAATC 59.382 41.667 0.00 7.09 0.00 2.17
128 129 4.037923 ACACGAAAGGAAGATGTTGCAAAT 59.962 37.500 0.00 0.00 0.00 2.32
129 130 3.380004 ACACGAAAGGAAGATGTTGCAAA 59.620 39.130 0.00 0.00 0.00 3.68
130 131 2.948979 ACACGAAAGGAAGATGTTGCAA 59.051 40.909 0.00 0.00 0.00 4.08
131 132 2.290367 CACACGAAAGGAAGATGTTGCA 59.710 45.455 0.00 0.00 0.00 4.08
132 133 2.350772 CCACACGAAAGGAAGATGTTGC 60.351 50.000 0.00 0.00 0.00 4.17
133 134 2.878406 ACCACACGAAAGGAAGATGTTG 59.122 45.455 0.00 0.00 0.00 3.33
134 135 3.208747 ACCACACGAAAGGAAGATGTT 57.791 42.857 0.00 0.00 0.00 2.71
135 136 2.930826 ACCACACGAAAGGAAGATGT 57.069 45.000 0.00 0.00 0.00 3.06
136 137 3.125316 GCTAACCACACGAAAGGAAGATG 59.875 47.826 0.00 0.00 0.00 2.90
137 138 3.244422 TGCTAACCACACGAAAGGAAGAT 60.244 43.478 0.00 0.00 0.00 2.40
138 139 2.103432 TGCTAACCACACGAAAGGAAGA 59.897 45.455 0.00 0.00 0.00 2.87
139 140 2.480419 CTGCTAACCACACGAAAGGAAG 59.520 50.000 0.00 0.00 0.00 3.46
140 141 2.158871 ACTGCTAACCACACGAAAGGAA 60.159 45.455 0.00 0.00 0.00 3.36
141 142 1.414919 ACTGCTAACCACACGAAAGGA 59.585 47.619 0.00 0.00 0.00 3.36
142 143 1.878953 ACTGCTAACCACACGAAAGG 58.121 50.000 0.00 0.00 0.00 3.11
143 144 3.650139 AGTACTGCTAACCACACGAAAG 58.350 45.455 0.00 0.00 0.00 2.62
144 145 3.319972 AGAGTACTGCTAACCACACGAAA 59.680 43.478 0.00 0.00 0.00 3.46
145 146 2.889045 AGAGTACTGCTAACCACACGAA 59.111 45.455 0.00 0.00 0.00 3.85
146 147 2.511659 AGAGTACTGCTAACCACACGA 58.488 47.619 0.00 0.00 0.00 4.35
147 148 3.439476 AGTAGAGTACTGCTAACCACACG 59.561 47.826 0.00 0.00 37.32 4.49
148 149 5.163673 GGTAGTAGAGTACTGCTAACCACAC 60.164 48.000 0.00 0.00 41.14 3.82
149 150 4.946157 GGTAGTAGAGTACTGCTAACCACA 59.054 45.833 0.00 0.00 41.14 4.17
150 151 4.946157 TGGTAGTAGAGTACTGCTAACCAC 59.054 45.833 0.00 1.55 44.52 4.16
151 152 5.183530 TGGTAGTAGAGTACTGCTAACCA 57.816 43.478 0.00 10.19 44.52 3.67
152 153 6.712179 AATGGTAGTAGAGTACTGCTAACC 57.288 41.667 0.00 7.92 44.52 2.85
153 154 8.674263 TCTAATGGTAGTAGAGTACTGCTAAC 57.326 38.462 0.00 3.54 45.07 2.34
154 155 9.286170 CATCTAATGGTAGTAGAGTACTGCTAA 57.714 37.037 0.00 0.00 41.48 3.09
155 156 7.390996 GCATCTAATGGTAGTAGAGTACTGCTA 59.609 40.741 0.00 0.00 40.63 3.49
156 157 6.207810 GCATCTAATGGTAGTAGAGTACTGCT 59.792 42.308 0.00 0.00 40.63 4.24
157 158 6.383415 GCATCTAATGGTAGTAGAGTACTGC 58.617 44.000 0.00 0.00 39.81 4.40
158 159 6.205076 ACGCATCTAATGGTAGTAGAGTACTG 59.795 42.308 0.00 0.00 39.81 2.74
159 160 6.297582 ACGCATCTAATGGTAGTAGAGTACT 58.702 40.000 0.00 0.00 42.68 2.73
160 161 6.427547 AGACGCATCTAATGGTAGTAGAGTAC 59.572 42.308 0.00 0.00 31.46 2.73
161 162 6.427242 CAGACGCATCTAATGGTAGTAGAGTA 59.573 42.308 0.00 0.00 32.25 2.59
162 163 5.239744 CAGACGCATCTAATGGTAGTAGAGT 59.760 44.000 0.00 0.00 32.25 3.24
163 164 5.335269 CCAGACGCATCTAATGGTAGTAGAG 60.335 48.000 0.00 0.00 32.25 2.43
164 165 4.519350 CCAGACGCATCTAATGGTAGTAGA 59.481 45.833 0.00 0.00 32.25 2.59
165 166 4.519350 TCCAGACGCATCTAATGGTAGTAG 59.481 45.833 0.00 0.00 32.25 2.57
166 167 4.466827 TCCAGACGCATCTAATGGTAGTA 58.533 43.478 0.00 0.00 32.25 1.82
167 168 3.296854 TCCAGACGCATCTAATGGTAGT 58.703 45.455 0.00 0.00 32.25 2.73
168 169 4.322080 TTCCAGACGCATCTAATGGTAG 57.678 45.455 0.00 0.00 32.25 3.18
169 170 4.442893 CCTTTCCAGACGCATCTAATGGTA 60.443 45.833 0.00 0.00 32.25 3.25
170 171 3.535561 CTTTCCAGACGCATCTAATGGT 58.464 45.455 0.00 0.00 32.25 3.55
171 172 2.874701 CCTTTCCAGACGCATCTAATGG 59.125 50.000 0.00 0.00 32.25 3.16
172 173 2.289002 GCCTTTCCAGACGCATCTAATG 59.711 50.000 0.00 0.00 32.25 1.90
173 174 2.171448 AGCCTTTCCAGACGCATCTAAT 59.829 45.455 0.00 0.00 32.25 1.73
174 175 1.555075 AGCCTTTCCAGACGCATCTAA 59.445 47.619 0.00 0.00 32.25 2.10
175 176 1.195115 AGCCTTTCCAGACGCATCTA 58.805 50.000 0.00 0.00 32.25 1.98
176 177 0.326264 AAGCCTTTCCAGACGCATCT 59.674 50.000 0.00 0.00 34.57 2.90
177 178 1.168714 AAAGCCTTTCCAGACGCATC 58.831 50.000 0.00 0.00 0.00 3.91
178 179 2.489938 TAAAGCCTTTCCAGACGCAT 57.510 45.000 0.00 0.00 0.00 4.73
179 180 2.264005 TTAAAGCCTTTCCAGACGCA 57.736 45.000 0.00 0.00 0.00 5.24
180 181 3.057526 ACAATTAAAGCCTTTCCAGACGC 60.058 43.478 0.00 0.00 0.00 5.19
181 182 4.379499 GGACAATTAAAGCCTTTCCAGACG 60.379 45.833 0.00 0.00 0.00 4.18
182 183 4.767409 AGGACAATTAAAGCCTTTCCAGAC 59.233 41.667 0.00 0.00 0.00 3.51
183 184 4.766891 CAGGACAATTAAAGCCTTTCCAGA 59.233 41.667 0.00 0.00 0.00 3.86
184 185 4.524328 ACAGGACAATTAAAGCCTTTCCAG 59.476 41.667 0.00 0.00 0.00 3.86
185 186 4.479158 ACAGGACAATTAAAGCCTTTCCA 58.521 39.130 0.00 0.00 0.00 3.53
186 187 5.468540 AACAGGACAATTAAAGCCTTTCC 57.531 39.130 0.00 0.00 0.00 3.13
187 188 9.489084 AAATAAACAGGACAATTAAAGCCTTTC 57.511 29.630 0.00 0.00 0.00 2.62
188 189 9.271828 CAAATAAACAGGACAATTAAAGCCTTT 57.728 29.630 0.00 0.00 0.00 3.11
189 190 7.387673 GCAAATAAACAGGACAATTAAAGCCTT 59.612 33.333 0.00 0.00 0.00 4.35
190 191 6.873605 GCAAATAAACAGGACAATTAAAGCCT 59.126 34.615 0.00 0.00 0.00 4.58
191 192 6.873605 AGCAAATAAACAGGACAATTAAAGCC 59.126 34.615 0.00 0.00 0.00 4.35
192 193 7.063426 GGAGCAAATAAACAGGACAATTAAAGC 59.937 37.037 0.00 0.00 0.00 3.51
193 194 7.545615 GGGAGCAAATAAACAGGACAATTAAAG 59.454 37.037 0.00 0.00 0.00 1.85
194 195 7.015682 TGGGAGCAAATAAACAGGACAATTAAA 59.984 33.333 0.00 0.00 0.00 1.52
195 196 6.495181 TGGGAGCAAATAAACAGGACAATTAA 59.505 34.615 0.00 0.00 0.00 1.40
196 197 6.013379 TGGGAGCAAATAAACAGGACAATTA 58.987 36.000 0.00 0.00 0.00 1.40
197 198 4.837860 TGGGAGCAAATAAACAGGACAATT 59.162 37.500 0.00 0.00 0.00 2.32
198 199 4.415596 TGGGAGCAAATAAACAGGACAAT 58.584 39.130 0.00 0.00 0.00 2.71
199 200 3.838565 TGGGAGCAAATAAACAGGACAA 58.161 40.909 0.00 0.00 0.00 3.18
200 201 3.517296 TGGGAGCAAATAAACAGGACA 57.483 42.857 0.00 0.00 0.00 4.02
201 202 3.763897 ACATGGGAGCAAATAAACAGGAC 59.236 43.478 0.00 0.00 0.00 3.85
202 203 3.763360 CACATGGGAGCAAATAAACAGGA 59.237 43.478 0.00 0.00 0.00 3.86
203 204 3.511146 ACACATGGGAGCAAATAAACAGG 59.489 43.478 0.00 0.00 0.00 4.00
204 205 4.460382 AGACACATGGGAGCAAATAAACAG 59.540 41.667 0.00 0.00 0.00 3.16
205 206 4.218200 CAGACACATGGGAGCAAATAAACA 59.782 41.667 0.00 0.00 0.00 2.83
206 207 4.218417 ACAGACACATGGGAGCAAATAAAC 59.782 41.667 0.00 0.00 0.00 2.01
207 208 4.406456 ACAGACACATGGGAGCAAATAAA 58.594 39.130 0.00 0.00 0.00 1.40
208 209 4.032960 ACAGACACATGGGAGCAAATAA 57.967 40.909 0.00 0.00 0.00 1.40
209 210 3.719268 ACAGACACATGGGAGCAAATA 57.281 42.857 0.00 0.00 0.00 1.40
210 211 2.592102 ACAGACACATGGGAGCAAAT 57.408 45.000 0.00 0.00 0.00 2.32
211 212 2.363306 AACAGACACATGGGAGCAAA 57.637 45.000 0.00 0.00 0.00 3.68
212 213 2.229792 GAAACAGACACATGGGAGCAA 58.770 47.619 0.00 0.00 0.00 3.91
213 214 1.545428 GGAAACAGACACATGGGAGCA 60.545 52.381 0.00 0.00 0.00 4.26
214 215 1.168714 GGAAACAGACACATGGGAGC 58.831 55.000 0.00 0.00 0.00 4.70
215 216 1.073763 TGGGAAACAGACACATGGGAG 59.926 52.381 0.00 0.00 0.00 4.30
216 217 1.144691 TGGGAAACAGACACATGGGA 58.855 50.000 0.00 0.00 0.00 4.37
217 218 1.247567 GTGGGAAACAGACACATGGG 58.752 55.000 0.00 0.00 35.30 4.00
218 219 1.608590 GTGTGGGAAACAGACACATGG 59.391 52.381 0.00 0.00 45.60 3.66
224 225 2.749621 GGATGATGTGTGGGAAACAGAC 59.250 50.000 0.00 0.00 43.28 3.51
225 226 2.615240 CGGATGATGTGTGGGAAACAGA 60.615 50.000 0.00 0.00 40.26 3.41
226 227 1.739466 CGGATGATGTGTGGGAAACAG 59.261 52.381 0.00 0.00 40.26 3.16
227 228 1.612991 CCGGATGATGTGTGGGAAACA 60.613 52.381 0.00 0.00 36.04 2.83
228 229 1.094785 CCGGATGATGTGTGGGAAAC 58.905 55.000 0.00 0.00 0.00 2.78
229 230 0.988063 TCCGGATGATGTGTGGGAAA 59.012 50.000 0.00 0.00 0.00 3.13
230 231 0.988063 TTCCGGATGATGTGTGGGAA 59.012 50.000 4.15 0.00 0.00 3.97
231 232 0.251916 GTTCCGGATGATGTGTGGGA 59.748 55.000 4.15 0.00 0.00 4.37
232 233 0.253044 AGTTCCGGATGATGTGTGGG 59.747 55.000 4.15 0.00 0.00 4.61
233 234 2.168521 AGTAGTTCCGGATGATGTGTGG 59.831 50.000 4.15 0.00 0.00 4.17
234 235 3.526931 AGTAGTTCCGGATGATGTGTG 57.473 47.619 4.15 0.00 0.00 3.82
235 236 3.637229 CCTAGTAGTTCCGGATGATGTGT 59.363 47.826 4.15 0.00 0.00 3.72
236 237 3.637229 ACCTAGTAGTTCCGGATGATGTG 59.363 47.826 4.15 0.00 0.00 3.21
237 238 3.912248 ACCTAGTAGTTCCGGATGATGT 58.088 45.455 4.15 0.00 0.00 3.06
238 239 5.946972 AGATACCTAGTAGTTCCGGATGATG 59.053 44.000 4.15 0.00 0.00 3.07
239 240 6.012333 AGAGATACCTAGTAGTTCCGGATGAT 60.012 42.308 4.15 0.00 0.00 2.45
240 241 5.310068 AGAGATACCTAGTAGTTCCGGATGA 59.690 44.000 4.15 0.00 0.00 2.92
241 242 5.562635 AGAGATACCTAGTAGTTCCGGATG 58.437 45.833 4.15 0.00 0.00 3.51
242 243 5.846528 AGAGATACCTAGTAGTTCCGGAT 57.153 43.478 4.15 0.00 0.00 4.18
243 244 5.643421 AAGAGATACCTAGTAGTTCCGGA 57.357 43.478 0.00 0.00 0.00 5.14
244 245 6.505272 CAAAAGAGATACCTAGTAGTTCCGG 58.495 44.000 0.00 0.00 0.00 5.14
245 246 5.978322 GCAAAAGAGATACCTAGTAGTTCCG 59.022 44.000 0.00 0.00 0.00 4.30
246 247 6.875076 TGCAAAAGAGATACCTAGTAGTTCC 58.125 40.000 0.00 0.00 0.00 3.62
247 248 7.817962 TGTTGCAAAAGAGATACCTAGTAGTTC 59.182 37.037 0.00 0.00 0.00 3.01
248 249 7.676947 TGTTGCAAAAGAGATACCTAGTAGTT 58.323 34.615 0.00 0.00 0.00 2.24
249 250 7.178628 TCTGTTGCAAAAGAGATACCTAGTAGT 59.821 37.037 15.62 0.00 0.00 2.73
250 251 7.548097 TCTGTTGCAAAAGAGATACCTAGTAG 58.452 38.462 15.62 0.00 0.00 2.57
251 252 7.476540 TCTGTTGCAAAAGAGATACCTAGTA 57.523 36.000 15.62 0.00 0.00 1.82
252 253 6.360370 TCTGTTGCAAAAGAGATACCTAGT 57.640 37.500 15.62 0.00 0.00 2.57
253 254 7.672983 TTTCTGTTGCAAAAGAGATACCTAG 57.327 36.000 18.57 0.00 0.00 3.02
254 255 8.635765 ATTTTCTGTTGCAAAAGAGATACCTA 57.364 30.769 18.57 0.18 0.00 3.08
255 256 6.959639 TTTTCTGTTGCAAAAGAGATACCT 57.040 33.333 18.57 0.00 0.00 3.08
256 257 7.327032 GTGATTTTCTGTTGCAAAAGAGATACC 59.673 37.037 18.57 9.51 0.00 2.73
257 258 8.078596 AGTGATTTTCTGTTGCAAAAGAGATAC 58.921 33.333 18.57 13.27 0.00 2.24
258 259 8.169977 AGTGATTTTCTGTTGCAAAAGAGATA 57.830 30.769 18.57 9.18 0.00 1.98
259 260 7.047460 AGTGATTTTCTGTTGCAAAAGAGAT 57.953 32.000 18.57 16.09 0.00 2.75
260 261 6.455360 AGTGATTTTCTGTTGCAAAAGAGA 57.545 33.333 18.57 12.39 0.00 3.10
261 262 8.807667 ATAAGTGATTTTCTGTTGCAAAAGAG 57.192 30.769 18.57 7.18 0.00 2.85
262 263 8.632679 AGATAAGTGATTTTCTGTTGCAAAAGA 58.367 29.630 15.62 15.62 0.00 2.52
263 264 8.807667 AGATAAGTGATTTTCTGTTGCAAAAG 57.192 30.769 10.64 10.64 0.00 2.27
264 265 9.248291 GAAGATAAGTGATTTTCTGTTGCAAAA 57.752 29.630 0.00 0.00 0.00 2.44
265 266 8.632679 AGAAGATAAGTGATTTTCTGTTGCAAA 58.367 29.630 0.00 0.00 37.55 3.68
266 267 8.169977 AGAAGATAAGTGATTTTCTGTTGCAA 57.830 30.769 0.00 0.00 37.55 4.08
267 268 7.750229 AGAAGATAAGTGATTTTCTGTTGCA 57.250 32.000 0.00 0.00 37.55 4.08
268 269 7.752686 GGAAGAAGATAAGTGATTTTCTGTTGC 59.247 37.037 0.00 0.00 37.88 4.17
269 270 8.239998 GGGAAGAAGATAAGTGATTTTCTGTTG 58.760 37.037 0.00 0.00 37.88 3.33
270 271 7.394641 GGGGAAGAAGATAAGTGATTTTCTGTT 59.605 37.037 0.00 0.00 37.88 3.16
271 272 6.887002 GGGGAAGAAGATAAGTGATTTTCTGT 59.113 38.462 0.00 0.00 37.88 3.41
272 273 6.886459 TGGGGAAGAAGATAAGTGATTTTCTG 59.114 38.462 0.00 0.00 37.88 3.02
273 274 6.887002 GTGGGGAAGAAGATAAGTGATTTTCT 59.113 38.462 0.00 0.00 39.97 2.52
274 275 6.659242 TGTGGGGAAGAAGATAAGTGATTTTC 59.341 38.462 0.00 0.00 0.00 2.29
275 276 6.552008 TGTGGGGAAGAAGATAAGTGATTTT 58.448 36.000 0.00 0.00 0.00 1.82
276 277 6.139679 TGTGGGGAAGAAGATAAGTGATTT 57.860 37.500 0.00 0.00 0.00 2.17
277 278 5.779241 TGTGGGGAAGAAGATAAGTGATT 57.221 39.130 0.00 0.00 0.00 2.57
278 279 5.429762 TGATGTGGGGAAGAAGATAAGTGAT 59.570 40.000 0.00 0.00 0.00 3.06
279 280 4.782691 TGATGTGGGGAAGAAGATAAGTGA 59.217 41.667 0.00 0.00 0.00 3.41
280 281 5.102953 TGATGTGGGGAAGAAGATAAGTG 57.897 43.478 0.00 0.00 0.00 3.16
281 282 5.983333 ATGATGTGGGGAAGAAGATAAGT 57.017 39.130 0.00 0.00 0.00 2.24
282 283 7.072263 AGTATGATGTGGGGAAGAAGATAAG 57.928 40.000 0.00 0.00 0.00 1.73
283 284 6.043243 GGAGTATGATGTGGGGAAGAAGATAA 59.957 42.308 0.00 0.00 0.00 1.75
284 285 5.544176 GGAGTATGATGTGGGGAAGAAGATA 59.456 44.000 0.00 0.00 0.00 1.98
285 286 4.349342 GGAGTATGATGTGGGGAAGAAGAT 59.651 45.833 0.00 0.00 0.00 2.40
286 287 3.711704 GGAGTATGATGTGGGGAAGAAGA 59.288 47.826 0.00 0.00 0.00 2.87
287 288 3.713764 AGGAGTATGATGTGGGGAAGAAG 59.286 47.826 0.00 0.00 0.00 2.85
288 289 3.455910 CAGGAGTATGATGTGGGGAAGAA 59.544 47.826 0.00 0.00 0.00 2.52
289 290 3.041211 CAGGAGTATGATGTGGGGAAGA 58.959 50.000 0.00 0.00 0.00 2.87
290 291 2.486191 GCAGGAGTATGATGTGGGGAAG 60.486 54.545 0.00 0.00 0.00 3.46
291 292 1.490490 GCAGGAGTATGATGTGGGGAA 59.510 52.381 0.00 0.00 0.00 3.97
292 293 1.131638 GCAGGAGTATGATGTGGGGA 58.868 55.000 0.00 0.00 0.00 4.81
293 294 0.839277 TGCAGGAGTATGATGTGGGG 59.161 55.000 0.00 0.00 0.00 4.96
294 295 2.945080 ATGCAGGAGTATGATGTGGG 57.055 50.000 0.00 0.00 0.00 4.61
295 296 4.201657 TCAAATGCAGGAGTATGATGTGG 58.798 43.478 0.00 0.00 0.00 4.17
296 297 5.529800 TGATCAAATGCAGGAGTATGATGTG 59.470 40.000 0.00 0.00 0.00 3.21
297 298 5.687780 TGATCAAATGCAGGAGTATGATGT 58.312 37.500 0.00 0.00 0.00 3.06
298 299 6.262496 AGTTGATCAAATGCAGGAGTATGATG 59.738 38.462 10.35 0.00 0.00 3.07
299 300 6.363065 AGTTGATCAAATGCAGGAGTATGAT 58.637 36.000 10.35 0.00 0.00 2.45
300 301 5.748402 AGTTGATCAAATGCAGGAGTATGA 58.252 37.500 10.35 0.00 0.00 2.15
301 302 6.263344 CAAGTTGATCAAATGCAGGAGTATG 58.737 40.000 10.35 0.00 0.00 2.39
302 303 5.163581 GCAAGTTGATCAAATGCAGGAGTAT 60.164 40.000 29.01 4.36 36.21 2.12
303 304 4.156556 GCAAGTTGATCAAATGCAGGAGTA 59.843 41.667 29.01 0.00 36.21 2.59
304 305 3.057033 GCAAGTTGATCAAATGCAGGAGT 60.057 43.478 29.01 5.61 36.21 3.85
305 306 3.192844 AGCAAGTTGATCAAATGCAGGAG 59.807 43.478 32.41 13.69 37.67 3.69
306 307 3.159472 AGCAAGTTGATCAAATGCAGGA 58.841 40.909 32.41 3.28 37.67 3.86
307 308 3.057104 TGAGCAAGTTGATCAAATGCAGG 60.057 43.478 32.41 16.62 40.12 4.85
308 309 4.168922 TGAGCAAGTTGATCAAATGCAG 57.831 40.909 32.41 18.72 40.12 4.41
309 310 4.673320 CGATGAGCAAGTTGATCAAATGCA 60.673 41.667 32.41 21.34 46.47 3.96
310 311 3.789756 CGATGAGCAAGTTGATCAAATGC 59.210 43.478 26.09 27.72 46.47 3.56
311 312 4.978186 ACGATGAGCAAGTTGATCAAATG 58.022 39.130 26.09 19.69 46.47 2.32
312 313 5.396484 CAACGATGAGCAAGTTGATCAAAT 58.604 37.500 26.09 12.16 46.47 2.32
313 314 4.320421 CCAACGATGAGCAAGTTGATCAAA 60.320 41.667 26.09 5.76 46.47 2.69
314 315 3.189080 CCAACGATGAGCAAGTTGATCAA 59.811 43.478 26.09 11.16 46.47 2.57
316 317 2.476854 GCCAACGATGAGCAAGTTGATC 60.477 50.000 14.20 14.20 45.66 2.92
317 318 1.470098 GCCAACGATGAGCAAGTTGAT 59.530 47.619 7.16 0.00 45.66 2.57
318 319 0.874390 GCCAACGATGAGCAAGTTGA 59.126 50.000 7.16 0.00 45.66 3.18
319 320 0.109597 GGCCAACGATGAGCAAGTTG 60.110 55.000 0.00 0.00 43.31 3.16
320 321 1.244019 GGGCCAACGATGAGCAAGTT 61.244 55.000 4.39 0.00 0.00 2.66
321 322 1.675641 GGGCCAACGATGAGCAAGT 60.676 57.895 4.39 0.00 0.00 3.16
322 323 2.409870 GGGGCCAACGATGAGCAAG 61.410 63.158 4.39 0.00 0.00 4.01
323 324 2.361104 GGGGCCAACGATGAGCAA 60.361 61.111 4.39 0.00 0.00 3.91
324 325 4.424711 GGGGGCCAACGATGAGCA 62.425 66.667 4.39 0.00 0.00 4.26
325 326 3.721370 ATGGGGGCCAACGATGAGC 62.721 63.158 4.39 0.00 36.95 4.26
326 327 0.182537 TAATGGGGGCCAACGATGAG 59.817 55.000 4.39 0.00 36.95 2.90
327 328 0.850100 ATAATGGGGGCCAACGATGA 59.150 50.000 4.39 0.00 36.95 2.92
328 329 1.703411 AATAATGGGGGCCAACGATG 58.297 50.000 4.39 0.00 36.95 3.84
329 330 2.038659 CAAATAATGGGGGCCAACGAT 58.961 47.619 4.39 0.00 36.95 3.73
330 331 1.479709 CAAATAATGGGGGCCAACGA 58.520 50.000 4.39 0.00 36.95 3.85
331 332 0.179086 GCAAATAATGGGGGCCAACG 60.179 55.000 4.39 0.00 36.95 4.10
332 333 1.203237 AGCAAATAATGGGGGCCAAC 58.797 50.000 4.39 0.00 36.95 3.77
333 334 1.836802 GAAGCAAATAATGGGGGCCAA 59.163 47.619 4.39 0.00 36.95 4.52
334 335 1.008206 AGAAGCAAATAATGGGGGCCA 59.992 47.619 4.39 0.00 38.19 5.36
335 336 1.793414 AGAAGCAAATAATGGGGGCC 58.207 50.000 0.00 0.00 0.00 5.80
336 337 4.262592 CCAATAGAAGCAAATAATGGGGGC 60.263 45.833 0.00 0.00 0.00 5.80
337 338 4.901250 ACCAATAGAAGCAAATAATGGGGG 59.099 41.667 0.00 0.00 0.00 5.40
338 339 5.363580 ACACCAATAGAAGCAAATAATGGGG 59.636 40.000 0.00 0.00 32.53 4.96
339 340 6.096705 TCACACCAATAGAAGCAAATAATGGG 59.903 38.462 0.00 0.00 0.00 4.00
340 341 7.099266 TCACACCAATAGAAGCAAATAATGG 57.901 36.000 0.00 0.00 0.00 3.16
341 342 7.765307 ACTCACACCAATAGAAGCAAATAATG 58.235 34.615 0.00 0.00 0.00 1.90
342 343 7.944729 ACTCACACCAATAGAAGCAAATAAT 57.055 32.000 0.00 0.00 0.00 1.28
343 344 7.309133 CCAACTCACACCAATAGAAGCAAATAA 60.309 37.037 0.00 0.00 0.00 1.40
344 345 6.150976 CCAACTCACACCAATAGAAGCAAATA 59.849 38.462 0.00 0.00 0.00 1.40
345 346 5.047802 CCAACTCACACCAATAGAAGCAAAT 60.048 40.000 0.00 0.00 0.00 2.32
346 347 4.278170 CCAACTCACACCAATAGAAGCAAA 59.722 41.667 0.00 0.00 0.00 3.68
347 348 3.820467 CCAACTCACACCAATAGAAGCAA 59.180 43.478 0.00 0.00 0.00 3.91
348 349 3.072330 TCCAACTCACACCAATAGAAGCA 59.928 43.478 0.00 0.00 0.00 3.91
349 350 3.674997 TCCAACTCACACCAATAGAAGC 58.325 45.455 0.00 0.00 0.00 3.86
350 351 6.824305 AATTCCAACTCACACCAATAGAAG 57.176 37.500 0.00 0.00 0.00 2.85
351 352 8.877864 ATAAATTCCAACTCACACCAATAGAA 57.122 30.769 0.00 0.00 0.00 2.10
463 467 2.811514 GCAGAGGCGATGGATGGGA 61.812 63.158 0.00 0.00 0.00 4.37
674 678 0.752376 GACGGGGATTCGGAGAGACT 60.752 60.000 0.00 0.00 38.43 3.24
1606 1676 1.068434 TCATTGTCTGTGCACTCACGA 59.932 47.619 19.41 14.00 46.01 4.35
1717 1787 4.127171 GCTTCAAGCCATTCGGAATAGTA 58.873 43.478 0.00 0.00 34.48 1.82
1772 1843 8.943909 AGTCCGGAGTTCAAATAAGTTATTAG 57.056 34.615 3.06 0.00 0.00 1.73
2162 2234 5.794687 AATTGATGACGTCGCTTTGAATA 57.205 34.783 11.62 0.00 0.00 1.75
2239 2311 8.687292 TCTTCTAGAAATTGAATGCTGCATAT 57.313 30.769 16.58 2.86 0.00 1.78
2622 2698 4.104102 ACCCCAAAGTTTAGTCTCACATCA 59.896 41.667 0.00 0.00 0.00 3.07
2625 2701 3.434453 CCACCCCAAAGTTTAGTCTCACA 60.434 47.826 0.00 0.00 0.00 3.58
2651 2727 1.514087 CGGTACTAAAGGCCTCGCA 59.486 57.895 5.23 0.00 0.00 5.10
2686 2805 2.236395 GGAAGAGCAGGCCTTTAGTACA 59.764 50.000 0.00 0.00 0.00 2.90
2771 2890 9.228949 CGTAAGTGTTGTATATATAGGAGAGGT 57.771 37.037 0.00 0.00 0.00 3.85
3795 4352 4.645667 TTTCGTCGTCAGATGACATTTG 57.354 40.909 20.58 6.36 44.99 2.32
4098 4655 4.067972 TGCTCCGTCTTCAAGTAAACTT 57.932 40.909 0.00 0.00 36.45 2.66
4172 4733 2.355444 GTGCTTGCCAAGTTTTGCATTT 59.645 40.909 6.28 0.00 37.33 2.32
4233 4794 4.994907 TCTTCCGGACGAATATCAAAGA 57.005 40.909 8.43 0.00 0.00 2.52
4404 4965 7.382759 GGACATGTTTGCTTAAACCGAAATAAA 59.617 33.333 0.00 0.00 31.87 1.40
4416 4977 1.917782 GCGCCGGACATGTTTGCTTA 61.918 55.000 5.05 0.00 0.00 3.09
4442 5003 1.838077 GGGGCAGTAGTAGGTCATGTT 59.162 52.381 0.00 0.00 0.00 2.71
4446 5007 1.380785 CCGGGGCAGTAGTAGGTCA 60.381 63.158 0.00 0.00 0.00 4.02
4717 5281 6.098409 AGTCCCTGTTGAAGAACATCGTATAT 59.902 38.462 0.00 0.00 41.33 0.86
4810 5374 5.993441 CACTCATGTGCAATGTAGGATATCA 59.007 40.000 4.83 0.00 37.38 2.15
4972 5537 9.402320 GTATAGCTCTCCTGATTCATCATACTA 57.598 37.037 0.00 0.00 36.02 1.82
5054 5623 1.561643 AGGACACGGACATGAGACAT 58.438 50.000 0.00 0.00 0.00 3.06
5074 5643 5.964958 AATCATCACCAACATCGAAGTTT 57.035 34.783 2.74 0.00 0.00 2.66
5702 6320 2.818751 TTCCTCCATAATGCGGGTTT 57.181 45.000 0.00 0.00 0.00 3.27
5735 6353 4.575885 TGTTATAGACTTTGTGCCCTGAC 58.424 43.478 0.00 0.00 0.00 3.51
5752 6370 6.653020 TCAATTCACCAGCATACTCTGTTAT 58.347 36.000 0.00 0.00 32.32 1.89
5826 6444 6.099413 TGTGATGAATGGCTAGATCTCTCTTT 59.901 38.462 0.00 0.00 32.66 2.52
5918 6536 9.965902 ATTCTGGTTGAGAGAATATAAGTTGTT 57.034 29.630 0.00 0.00 38.20 2.83
6043 6661 3.994392 CGGCGGTATTGCATAGATAAAGT 59.006 43.478 0.00 0.00 36.28 2.66
6149 6767 4.806892 TGGATACCCATGCATCTCAAAAT 58.193 39.130 0.00 0.00 37.58 1.82
6165 6783 3.954258 CCTTTTCCCACCAAGATGGATAC 59.046 47.826 2.85 0.00 43.02 2.24
6501 7120 3.120782 GCTACACGAACCTTGTCTTTACG 59.879 47.826 0.00 0.00 0.00 3.18
6537 7156 2.666317 TCCTCGTCCTGCAATAGATGA 58.334 47.619 0.00 0.00 0.00 2.92
6810 7430 3.339141 TGCGGTGATGCAACAATAACTA 58.661 40.909 0.00 0.00 43.02 2.24
6968 7588 9.671279 ATTCTTTCAAATGGTTTTTCACTTCTT 57.329 25.926 0.00 0.00 0.00 2.52
7123 7743 4.432712 GGCACACAAGTCTTTGAAAACAT 58.567 39.130 0.00 0.00 37.73 2.71
7174 7794 5.003778 CCGTTGTCCGTACGTAGAATTTTAG 59.996 44.000 15.21 0.00 37.30 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.