Multiple sequence alignment - TraesCS2A01G475500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G475500 chr2A 100.000 5708 0 0 1 5708 715968265 715962558 0.000000e+00 10541.0
1 TraesCS2A01G475500 chr2A 82.817 1484 208 32 1061 2523 716163647 716165104 0.000000e+00 1284.0
2 TraesCS2A01G475500 chr2A 80.603 763 103 24 2939 3668 716151749 716152499 1.080000e-151 547.0
3 TraesCS2A01G475500 chr2A 84.962 133 12 6 3806 3930 716152521 716152653 1.670000e-25 128.0
4 TraesCS2A01G475500 chr2B 91.588 2532 143 33 860 3365 695440122 695437635 0.000000e+00 3432.0
5 TraesCS2A01G475500 chr2B 91.901 1420 76 19 1950 3365 695412333 695410949 0.000000e+00 1949.0
6 TraesCS2A01G475500 chr2B 93.987 898 42 7 1031 1923 695414361 695413471 0.000000e+00 1349.0
7 TraesCS2A01G475500 chr2B 84.199 1405 184 28 1053 2434 695508131 695509520 0.000000e+00 1330.0
8 TraesCS2A01G475500 chr2B 92.567 861 34 15 3857 4693 296067583 296066729 0.000000e+00 1208.0
9 TraesCS2A01G475500 chr2B 94.311 791 33 8 4395 5181 695436639 695435857 0.000000e+00 1201.0
10 TraesCS2A01G475500 chr2B 94.561 570 26 4 3364 3933 695437541 695436977 0.000000e+00 876.0
11 TraesCS2A01G475500 chr2B 94.035 570 30 3 3364 3933 695410855 695410290 0.000000e+00 861.0
12 TraesCS2A01G475500 chr2B 95.842 457 19 0 4050 4506 695410264 695409808 0.000000e+00 739.0
13 TraesCS2A01G475500 chr2B 95.072 345 17 0 4050 4394 695436951 695436607 1.400000e-150 544.0
14 TraesCS2A01G475500 chr2B 90.556 360 16 7 5351 5708 695408993 695408650 1.450000e-125 460.0
15 TraesCS2A01G475500 chr2B 95.686 255 8 2 4719 4971 695409805 695409552 1.910000e-109 407.0
16 TraesCS2A01G475500 chr2B 88.304 342 26 8 5006 5338 695409552 695409216 1.150000e-106 398.0
17 TraesCS2A01G475500 chr2B 95.279 233 10 1 5352 5584 695435508 695435277 9.040000e-98 368.0
18 TraesCS2A01G475500 chr2B 89.474 171 9 2 4695 4857 296066646 296066477 2.080000e-49 207.0
19 TraesCS2A01G475500 chr2B 87.421 159 13 3 5184 5338 695435797 695435642 5.880000e-40 176.0
20 TraesCS2A01G475500 chr2B 89.552 134 10 3 2811 2943 248148100 248148230 3.540000e-37 167.0
21 TraesCS2A01G475500 chr2B 97.561 41 0 1 5577 5616 695376647 695376607 1.030000e-07 69.4
22 TraesCS2A01G475500 chr2D 92.552 1893 98 27 739 2592 577829981 577828093 0.000000e+00 2675.0
23 TraesCS2A01G475500 chr2D 94.508 965 40 5 4033 4988 577827666 577826706 0.000000e+00 1476.0
24 TraesCS2A01G475500 chr2D 80.352 1817 240 67 1053 2813 578040812 578042567 0.000000e+00 1269.0
25 TraesCS2A01G475500 chr2D 81.707 1558 237 31 1058 2588 578307428 578308964 0.000000e+00 1254.0
26 TraesCS2A01G475500 chr2D 81.019 1296 208 25 1061 2338 577802846 577801571 0.000000e+00 996.0
27 TraesCS2A01G475500 chr2D 79.224 1237 204 31 1249 2471 577440842 577442039 0.000000e+00 811.0
28 TraesCS2A01G475500 chr2D 81.459 836 134 14 1700 2523 578320435 578321261 0.000000e+00 665.0
29 TraesCS2A01G475500 chr2D 92.217 424 21 1 2683 3106 577828084 577827673 1.770000e-164 590.0
30 TraesCS2A01G475500 chr2D 80.332 783 107 26 2939 3687 578043517 578044286 3.010000e-152 549.0
31 TraesCS2A01G475500 chr2D 81.026 643 100 14 1058 1689 578312712 578313343 5.140000e-135 492.0
32 TraesCS2A01G475500 chr2D 84.430 456 57 10 4052 4506 577579735 577579293 2.440000e-118 436.0
33 TraesCS2A01G475500 chr2D 85.294 442 43 9 4051 4490 577800581 577800160 2.440000e-118 436.0
34 TraesCS2A01G475500 chr2D 86.395 294 24 7 5056 5338 577826677 577826389 2.000000e-79 307.0
35 TraesCS2A01G475500 chr2D 88.546 227 20 4 5488 5708 577826124 577825898 2.620000e-68 270.0
36 TraesCS2A01G475500 chr2D 92.742 124 9 0 3934 4057 607675860 607675737 4.540000e-41 180.0
37 TraesCS2A01G475500 chr2D 90.000 60 6 0 5558 5617 577444164 577444223 1.710000e-10 78.7
38 TraesCS2A01G475500 chr7B 91.768 1069 56 15 3818 4857 511462349 511461284 0.000000e+00 1458.0
39 TraesCS2A01G475500 chr7A 90.449 1068 50 13 3818 4857 296604103 296605146 0.000000e+00 1360.0
40 TraesCS2A01G475500 chr7A 90.449 1068 51 12 3818 4857 299568747 299567703 0.000000e+00 1360.0
41 TraesCS2A01G475500 chr7A 89.888 1068 57 21 3818 4857 305709067 305708023 0.000000e+00 1327.0
42 TraesCS2A01G475500 chr7A 91.935 124 9 1 2811 2933 538361760 538361883 7.600000e-39 172.0
43 TraesCS2A01G475500 chr7A 89.474 133 11 3 3935 4067 13798431 13798302 1.270000e-36 165.0
44 TraesCS2A01G475500 chr7A 90.000 90 9 0 2587 2676 574129409 574129320 3.610000e-22 117.0
45 TraesCS2A01G475500 chr7A 91.250 80 7 0 1 80 192987882 192987961 6.050000e-20 110.0
46 TraesCS2A01G475500 chr3A 91.572 439 27 3 4427 4857 71265643 71266079 1.060000e-166 597.0
47 TraesCS2A01G475500 chrUn 89.011 455 21 12 2435 2888 476501510 476501936 2.340000e-148 536.0
48 TraesCS2A01G475500 chr6A 87.381 420 23 11 3818 4217 58306381 58306790 6.740000e-124 455.0
49 TraesCS2A01G475500 chr6A 93.333 90 5 1 2587 2675 548408145 548408056 1.290000e-26 132.0
50 TraesCS2A01G475500 chr3D 92.683 123 8 1 2811 2932 422517862 422517984 5.880000e-40 176.0
51 TraesCS2A01G475500 chr3D 92.437 119 7 2 3935 4053 537915012 537914896 9.840000e-38 169.0
52 TraesCS2A01G475500 chr3D 89.313 131 9 4 3935 4062 332634654 332634782 5.920000e-35 159.0
53 TraesCS2A01G475500 chr3D 89.888 89 9 0 2584 2672 326696952 326697040 1.300000e-21 115.0
54 TraesCS2A01G475500 chr3B 92.683 123 8 1 2811 2932 550641623 550641745 5.880000e-40 176.0
55 TraesCS2A01G475500 chr6D 91.667 120 10 0 3934 4053 410395467 410395586 3.540000e-37 167.0
56 TraesCS2A01G475500 chr6D 91.398 93 8 0 2581 2673 122992100 122992192 1.670000e-25 128.0
57 TraesCS2A01G475500 chr1A 91.667 120 10 0 3934 4053 292769431 292769550 3.540000e-37 167.0
58 TraesCS2A01G475500 chr5B 91.057 123 10 1 2811 2932 243411071 243411193 1.270000e-36 165.0
59 TraesCS2A01G475500 chr6B 90.909 121 11 0 3934 4054 205267344 205267224 4.580000e-36 163.0
60 TraesCS2A01G475500 chr6B 92.771 83 6 0 2591 2673 713700246 713700328 2.790000e-23 121.0
61 TraesCS2A01G475500 chr6B 88.660 97 11 0 2580 2676 155756179 155756083 1.000000e-22 119.0
62 TraesCS2A01G475500 chr1D 89.796 98 9 1 2580 2676 198901812 198901715 2.160000e-24 124.0
63 TraesCS2A01G475500 chr5D 88.542 96 11 0 2586 2681 134916580 134916485 3.610000e-22 117.0
64 TraesCS2A01G475500 chr5D 86.792 106 12 2 2566 2670 264494423 264494527 3.610000e-22 117.0
65 TraesCS2A01G475500 chr5A 95.238 63 3 0 1 63 548846494 548846556 3.640000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G475500 chr2A 715962558 715968265 5707 True 10541.000000 10541 100.000000 1 5708 1 chr2A.!!$R1 5707
1 TraesCS2A01G475500 chr2A 716163647 716165104 1457 False 1284.000000 1284 82.817000 1061 2523 1 chr2A.!!$F1 1462
2 TraesCS2A01G475500 chr2A 716151749 716152653 904 False 337.500000 547 82.782500 2939 3930 2 chr2A.!!$F2 991
3 TraesCS2A01G475500 chr2B 695508131 695509520 1389 False 1330.000000 1330 84.199000 1053 2434 1 chr2B.!!$F2 1381
4 TraesCS2A01G475500 chr2B 695435277 695440122 4845 True 1099.500000 3432 93.038667 860 5584 6 chr2B.!!$R4 4724
5 TraesCS2A01G475500 chr2B 695408650 695414361 5711 True 880.428571 1949 92.901571 1031 5708 7 chr2B.!!$R3 4677
6 TraesCS2A01G475500 chr2B 296066477 296067583 1106 True 707.500000 1208 91.020500 3857 4857 2 chr2B.!!$R2 1000
7 TraesCS2A01G475500 chr2D 577825898 577829981 4083 True 1063.600000 2675 90.843600 739 5708 5 chr2D.!!$R4 4969
8 TraesCS2A01G475500 chr2D 578040812 578044286 3474 False 909.000000 1269 80.342000 1053 3687 2 chr2D.!!$F3 2634
9 TraesCS2A01G475500 chr2D 578307428 578313343 5915 False 873.000000 1254 81.366500 1058 2588 2 chr2D.!!$F4 1530
10 TraesCS2A01G475500 chr2D 577800160 577802846 2686 True 716.000000 996 83.156500 1061 4490 2 chr2D.!!$R3 3429
11 TraesCS2A01G475500 chr2D 578320435 578321261 826 False 665.000000 665 81.459000 1700 2523 1 chr2D.!!$F1 823
12 TraesCS2A01G475500 chr2D 577440842 577444223 3381 False 444.850000 811 84.612000 1249 5617 2 chr2D.!!$F2 4368
13 TraesCS2A01G475500 chr7B 511461284 511462349 1065 True 1458.000000 1458 91.768000 3818 4857 1 chr7B.!!$R1 1039
14 TraesCS2A01G475500 chr7A 296604103 296605146 1043 False 1360.000000 1360 90.449000 3818 4857 1 chr7A.!!$F2 1039
15 TraesCS2A01G475500 chr7A 299567703 299568747 1044 True 1360.000000 1360 90.449000 3818 4857 1 chr7A.!!$R2 1039
16 TraesCS2A01G475500 chr7A 305708023 305709067 1044 True 1327.000000 1327 89.888000 3818 4857 1 chr7A.!!$R3 1039

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
307 308 0.036306 CCACTTAGGAAGGCAACGGT 59.964 55.0 0.0 0.0 41.08 4.83 F
1134 1192 0.460284 CGCTCGAACCACCATAAGCT 60.460 55.0 0.0 0.0 0.00 3.74 F
2159 3359 0.987294 CCCCTGAGTGGTTCATGTCT 59.013 55.0 0.0 0.0 34.68 3.41 F
2891 5221 0.109913 AAGTGGTCGAAACCTTCCCC 59.890 55.0 0.0 0.0 46.60 4.81 F
2892 5222 0.767060 AGTGGTCGAAACCTTCCCCT 60.767 55.0 0.0 0.0 46.60 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2159 3359 1.691976 TCCGCTGTTTCCAGAGAGAAA 59.308 47.619 0.00 0.0 40.57 2.52 R
2612 3965 0.521735 GGGGCTAGTTCAAAACTGCG 59.478 55.000 2.65 0.0 42.84 5.18 R
4022 7346 1.265732 CGTCACGAATTACTTGTCGCG 60.266 52.381 0.00 0.0 40.95 5.87 R
4354 7678 1.066286 GTCTGCACCTGCTCTCAAGAT 60.066 52.381 0.00 0.0 42.66 2.40 R
4768 8190 2.436292 CCTGAGCTCTGTGCCTGC 60.436 66.667 16.19 0.0 44.23 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 9.986157 TTACCACCTATATTACTCCTACTATGG 57.014 37.037 0.00 0.00 0.00 2.74
73 74 6.896307 ACCACCTATATTACTCCTACTATGGC 59.104 42.308 0.00 0.00 0.00 4.40
74 75 7.126733 CCACCTATATTACTCCTACTATGGCT 58.873 42.308 0.00 0.00 0.00 4.75
75 76 8.280084 CCACCTATATTACTCCTACTATGGCTA 58.720 40.741 0.00 0.00 0.00 3.93
76 77 9.344772 CACCTATATTACTCCTACTATGGCTAG 57.655 40.741 0.00 0.00 0.00 3.42
77 78 9.071334 ACCTATATTACTCCTACTATGGCTAGT 57.929 37.037 0.00 2.91 41.19 2.57
78 79 9.563748 CCTATATTACTCCTACTATGGCTAGTC 57.436 40.741 0.00 0.00 39.04 2.59
81 82 6.511017 TTACTCCTACTATGGCTAGTCTGA 57.489 41.667 0.00 0.18 39.04 3.27
82 83 4.980573 ACTCCTACTATGGCTAGTCTGAG 58.019 47.826 0.00 14.25 39.41 3.35
83 84 4.414182 ACTCCTACTATGGCTAGTCTGAGT 59.586 45.833 15.00 15.00 40.53 3.41
84 85 5.103855 ACTCCTACTATGGCTAGTCTGAGTT 60.104 44.000 6.97 0.00 41.48 3.01
85 86 5.767670 TCCTACTATGGCTAGTCTGAGTTT 58.232 41.667 6.97 0.00 39.04 2.66
86 87 5.594725 TCCTACTATGGCTAGTCTGAGTTTG 59.405 44.000 6.97 2.49 39.04 2.93
87 88 4.744795 ACTATGGCTAGTCTGAGTTTGG 57.255 45.455 0.00 0.00 32.56 3.28
88 89 2.409948 ATGGCTAGTCTGAGTTTGGC 57.590 50.000 0.00 0.00 0.00 4.52
89 90 1.352083 TGGCTAGTCTGAGTTTGGCT 58.648 50.000 0.00 0.00 0.00 4.75
90 91 1.699634 TGGCTAGTCTGAGTTTGGCTT 59.300 47.619 0.00 0.00 0.00 4.35
91 92 2.106511 TGGCTAGTCTGAGTTTGGCTTT 59.893 45.455 0.00 0.00 0.00 3.51
92 93 2.485814 GGCTAGTCTGAGTTTGGCTTTG 59.514 50.000 0.00 0.00 0.00 2.77
93 94 3.142174 GCTAGTCTGAGTTTGGCTTTGT 58.858 45.455 0.00 0.00 0.00 2.83
94 95 3.565902 GCTAGTCTGAGTTTGGCTTTGTT 59.434 43.478 0.00 0.00 0.00 2.83
95 96 4.555511 GCTAGTCTGAGTTTGGCTTTGTTG 60.556 45.833 0.00 0.00 0.00 3.33
96 97 3.620488 AGTCTGAGTTTGGCTTTGTTGA 58.380 40.909 0.00 0.00 0.00 3.18
97 98 4.210331 AGTCTGAGTTTGGCTTTGTTGAT 58.790 39.130 0.00 0.00 0.00 2.57
98 99 4.646492 AGTCTGAGTTTGGCTTTGTTGATT 59.354 37.500 0.00 0.00 0.00 2.57
99 100 5.127682 AGTCTGAGTTTGGCTTTGTTGATTT 59.872 36.000 0.00 0.00 0.00 2.17
100 101 5.460091 GTCTGAGTTTGGCTTTGTTGATTTC 59.540 40.000 0.00 0.00 0.00 2.17
101 102 5.126869 TCTGAGTTTGGCTTTGTTGATTTCA 59.873 36.000 0.00 0.00 0.00 2.69
102 103 5.916318 TGAGTTTGGCTTTGTTGATTTCAT 58.084 33.333 0.00 0.00 0.00 2.57
103 104 5.984926 TGAGTTTGGCTTTGTTGATTTCATC 59.015 36.000 0.00 0.00 0.00 2.92
104 105 5.916318 AGTTTGGCTTTGTTGATTTCATCA 58.084 33.333 0.00 0.00 37.55 3.07
105 106 5.754890 AGTTTGGCTTTGTTGATTTCATCAC 59.245 36.000 0.00 0.00 39.39 3.06
106 107 4.255833 TGGCTTTGTTGATTTCATCACC 57.744 40.909 0.00 0.00 39.39 4.02
107 108 3.006752 TGGCTTTGTTGATTTCATCACCC 59.993 43.478 0.00 0.00 39.39 4.61
108 109 3.244976 GCTTTGTTGATTTCATCACCCG 58.755 45.455 0.00 0.00 39.39 5.28
109 110 3.305335 GCTTTGTTGATTTCATCACCCGT 60.305 43.478 0.00 0.00 39.39 5.28
110 111 4.795962 GCTTTGTTGATTTCATCACCCGTT 60.796 41.667 0.00 0.00 39.39 4.44
111 112 4.927978 TTGTTGATTTCATCACCCGTTT 57.072 36.364 0.00 0.00 39.39 3.60
112 113 4.235939 TGTTGATTTCATCACCCGTTTG 57.764 40.909 0.00 0.00 39.39 2.93
113 114 3.634448 TGTTGATTTCATCACCCGTTTGT 59.366 39.130 0.00 0.00 39.39 2.83
114 115 4.226761 GTTGATTTCATCACCCGTTTGTC 58.773 43.478 0.00 0.00 39.39 3.18
115 116 2.482336 TGATTTCATCACCCGTTTGTCG 59.518 45.455 0.00 0.00 33.59 4.35
116 117 2.242047 TTTCATCACCCGTTTGTCGA 57.758 45.000 0.00 0.00 42.86 4.20
117 118 1.790755 TTCATCACCCGTTTGTCGAG 58.209 50.000 0.00 0.00 42.86 4.04
118 119 0.963225 TCATCACCCGTTTGTCGAGA 59.037 50.000 0.00 0.00 42.86 4.04
119 120 1.548719 TCATCACCCGTTTGTCGAGAT 59.451 47.619 0.00 0.00 42.86 2.75
120 121 1.660607 CATCACCCGTTTGTCGAGATG 59.339 52.381 0.00 0.00 42.86 2.90
121 122 0.669318 TCACCCGTTTGTCGAGATGC 60.669 55.000 0.00 0.00 42.86 3.91
122 123 1.375523 ACCCGTTTGTCGAGATGCC 60.376 57.895 0.00 0.00 42.86 4.40
123 124 2.452813 CCCGTTTGTCGAGATGCCG 61.453 63.158 0.00 0.00 42.86 5.69
124 125 2.395690 CGTTTGTCGAGATGCCGC 59.604 61.111 0.00 0.00 42.86 6.53
125 126 2.094659 CGTTTGTCGAGATGCCGCT 61.095 57.895 0.00 0.00 42.86 5.52
126 127 1.421485 GTTTGTCGAGATGCCGCTG 59.579 57.895 0.00 0.00 0.00 5.18
127 128 2.390599 TTTGTCGAGATGCCGCTGC 61.391 57.895 0.00 0.00 38.26 5.25
128 129 2.786539 TTTGTCGAGATGCCGCTGCT 62.787 55.000 0.70 0.00 38.71 4.24
129 130 2.510238 GTCGAGATGCCGCTGCTT 60.510 61.111 0.70 0.00 38.71 3.91
130 131 2.103042 GTCGAGATGCCGCTGCTTT 61.103 57.895 0.70 0.00 38.71 3.51
131 132 2.102438 TCGAGATGCCGCTGCTTTG 61.102 57.895 0.70 0.00 38.71 2.77
132 133 2.101770 GAGATGCCGCTGCTTTGC 59.898 61.111 0.70 0.00 38.71 3.68
140 141 4.410743 GCTGCTTTGCGGGCTGAC 62.411 66.667 0.00 0.00 35.15 3.51
141 142 3.741476 CTGCTTTGCGGGCTGACC 61.741 66.667 0.00 0.00 0.00 4.02
142 143 4.269523 TGCTTTGCGGGCTGACCT 62.270 61.111 0.00 0.00 36.97 3.85
143 144 2.985847 GCTTTGCGGGCTGACCTT 60.986 61.111 0.00 0.00 36.97 3.50
144 145 2.564721 GCTTTGCGGGCTGACCTTT 61.565 57.895 0.00 0.00 36.97 3.11
145 146 2.041153 CTTTGCGGGCTGACCTTTT 58.959 52.632 0.00 0.00 36.97 2.27
146 147 0.039165 CTTTGCGGGCTGACCTTTTC 60.039 55.000 0.00 0.00 36.97 2.29
147 148 0.467290 TTTGCGGGCTGACCTTTTCT 60.467 50.000 0.00 0.00 36.97 2.52
148 149 0.467290 TTGCGGGCTGACCTTTTCTT 60.467 50.000 0.00 0.00 36.97 2.52
149 150 0.889186 TGCGGGCTGACCTTTTCTTC 60.889 55.000 0.00 0.00 36.97 2.87
150 151 0.606673 GCGGGCTGACCTTTTCTTCT 60.607 55.000 0.00 0.00 36.97 2.85
151 152 1.338769 GCGGGCTGACCTTTTCTTCTA 60.339 52.381 0.00 0.00 36.97 2.10
152 153 2.874457 GCGGGCTGACCTTTTCTTCTAA 60.874 50.000 0.00 0.00 36.97 2.10
153 154 3.610911 CGGGCTGACCTTTTCTTCTAAT 58.389 45.455 0.00 0.00 36.97 1.73
154 155 3.623510 CGGGCTGACCTTTTCTTCTAATC 59.376 47.826 0.00 0.00 36.97 1.75
155 156 3.948473 GGGCTGACCTTTTCTTCTAATCC 59.052 47.826 0.00 0.00 35.85 3.01
156 157 4.324641 GGGCTGACCTTTTCTTCTAATCCT 60.325 45.833 0.00 0.00 35.85 3.24
157 158 5.257262 GGCTGACCTTTTCTTCTAATCCTT 58.743 41.667 0.00 0.00 0.00 3.36
158 159 5.712446 GGCTGACCTTTTCTTCTAATCCTTT 59.288 40.000 0.00 0.00 0.00 3.11
159 160 6.127869 GGCTGACCTTTTCTTCTAATCCTTTC 60.128 42.308 0.00 0.00 0.00 2.62
160 161 6.431234 GCTGACCTTTTCTTCTAATCCTTTCA 59.569 38.462 0.00 0.00 0.00 2.69
161 162 7.040409 GCTGACCTTTTCTTCTAATCCTTTCAA 60.040 37.037 0.00 0.00 0.00 2.69
162 163 8.940397 TGACCTTTTCTTCTAATCCTTTCAAT 57.060 30.769 0.00 0.00 0.00 2.57
163 164 8.796475 TGACCTTTTCTTCTAATCCTTTCAATG 58.204 33.333 0.00 0.00 0.00 2.82
164 165 8.127150 ACCTTTTCTTCTAATCCTTTCAATGG 57.873 34.615 0.00 0.00 0.00 3.16
165 166 7.730332 ACCTTTTCTTCTAATCCTTTCAATGGT 59.270 33.333 0.00 0.00 0.00 3.55
166 167 8.246871 CCTTTTCTTCTAATCCTTTCAATGGTC 58.753 37.037 0.00 0.00 0.00 4.02
167 168 8.704849 TTTTCTTCTAATCCTTTCAATGGTCA 57.295 30.769 0.00 0.00 0.00 4.02
168 169 8.704849 TTTCTTCTAATCCTTTCAATGGTCAA 57.295 30.769 0.00 0.00 0.00 3.18
169 170 7.687941 TCTTCTAATCCTTTCAATGGTCAAC 57.312 36.000 0.00 0.00 0.00 3.18
170 171 7.461749 TCTTCTAATCCTTTCAATGGTCAACT 58.538 34.615 0.00 0.00 0.00 3.16
171 172 7.607991 TCTTCTAATCCTTTCAATGGTCAACTC 59.392 37.037 0.00 0.00 0.00 3.01
172 173 6.180472 TCTAATCCTTTCAATGGTCAACTCC 58.820 40.000 0.00 0.00 0.00 3.85
173 174 4.664688 ATCCTTTCAATGGTCAACTCCT 57.335 40.909 0.00 0.00 0.00 3.69
174 175 4.021102 TCCTTTCAATGGTCAACTCCTC 57.979 45.455 0.00 0.00 0.00 3.71
175 176 3.652869 TCCTTTCAATGGTCAACTCCTCT 59.347 43.478 0.00 0.00 0.00 3.69
176 177 4.104738 TCCTTTCAATGGTCAACTCCTCTT 59.895 41.667 0.00 0.00 0.00 2.85
177 178 4.457257 CCTTTCAATGGTCAACTCCTCTTC 59.543 45.833 0.00 0.00 0.00 2.87
178 179 3.703001 TCAATGGTCAACTCCTCTTCC 57.297 47.619 0.00 0.00 0.00 3.46
179 180 3.251484 TCAATGGTCAACTCCTCTTCCT 58.749 45.455 0.00 0.00 0.00 3.36
180 181 4.425772 TCAATGGTCAACTCCTCTTCCTA 58.574 43.478 0.00 0.00 0.00 2.94
181 182 4.467795 TCAATGGTCAACTCCTCTTCCTAG 59.532 45.833 0.00 0.00 0.00 3.02
182 183 2.821437 TGGTCAACTCCTCTTCCTAGG 58.179 52.381 0.82 0.82 38.06 3.02
183 184 1.483004 GGTCAACTCCTCTTCCTAGGC 59.517 57.143 2.96 0.00 36.51 3.93
184 185 1.483004 GTCAACTCCTCTTCCTAGGCC 59.517 57.143 2.96 0.00 36.51 5.19
185 186 1.362932 TCAACTCCTCTTCCTAGGCCT 59.637 52.381 11.78 11.78 36.51 5.19
186 187 2.192263 CAACTCCTCTTCCTAGGCCTT 58.808 52.381 12.58 0.00 36.51 4.35
187 188 1.872773 ACTCCTCTTCCTAGGCCTTG 58.127 55.000 12.58 9.54 36.51 3.61
188 189 1.362932 ACTCCTCTTCCTAGGCCTTGA 59.637 52.381 12.58 5.38 36.51 3.02
189 190 2.225650 ACTCCTCTTCCTAGGCCTTGAA 60.226 50.000 12.58 13.95 36.51 2.69
190 191 3.044894 CTCCTCTTCCTAGGCCTTGAAT 58.955 50.000 12.58 0.00 36.51 2.57
191 192 3.457749 CTCCTCTTCCTAGGCCTTGAATT 59.542 47.826 12.58 0.00 36.51 2.17
192 193 3.456277 TCCTCTTCCTAGGCCTTGAATTC 59.544 47.826 12.58 0.00 36.51 2.17
193 194 3.457749 CCTCTTCCTAGGCCTTGAATTCT 59.542 47.826 12.58 0.00 0.00 2.40
194 195 4.656112 CCTCTTCCTAGGCCTTGAATTCTA 59.344 45.833 12.58 0.00 0.00 2.10
195 196 5.131142 CCTCTTCCTAGGCCTTGAATTCTAA 59.869 44.000 12.58 0.00 0.00 2.10
196 197 6.353082 CCTCTTCCTAGGCCTTGAATTCTAAA 60.353 42.308 12.58 0.00 0.00 1.85
197 198 6.415573 TCTTCCTAGGCCTTGAATTCTAAAC 58.584 40.000 12.58 0.00 0.00 2.01
198 199 5.112129 TCCTAGGCCTTGAATTCTAAACC 57.888 43.478 12.58 3.62 0.00 3.27
199 200 4.538490 TCCTAGGCCTTGAATTCTAAACCA 59.462 41.667 12.58 0.00 0.00 3.67
200 201 4.640647 CCTAGGCCTTGAATTCTAAACCAC 59.359 45.833 12.58 0.00 0.00 4.16
201 202 3.431415 AGGCCTTGAATTCTAAACCACC 58.569 45.455 0.00 0.00 0.00 4.61
202 203 3.161866 GGCCTTGAATTCTAAACCACCA 58.838 45.455 7.05 0.00 0.00 4.17
203 204 3.576550 GGCCTTGAATTCTAAACCACCAA 59.423 43.478 7.05 0.00 0.00 3.67
204 205 4.222810 GGCCTTGAATTCTAAACCACCAAT 59.777 41.667 7.05 0.00 0.00 3.16
205 206 5.279960 GGCCTTGAATTCTAAACCACCAATT 60.280 40.000 7.05 0.00 0.00 2.32
206 207 6.230472 GCCTTGAATTCTAAACCACCAATTT 58.770 36.000 7.05 0.00 0.00 1.82
207 208 6.368791 GCCTTGAATTCTAAACCACCAATTTC 59.631 38.462 7.05 0.00 0.00 2.17
208 209 6.873605 CCTTGAATTCTAAACCACCAATTTCC 59.126 38.462 7.05 0.00 0.00 3.13
209 210 7.256296 CCTTGAATTCTAAACCACCAATTTCCT 60.256 37.037 7.05 0.00 0.00 3.36
210 211 7.610580 TGAATTCTAAACCACCAATTTCCTT 57.389 32.000 7.05 0.00 0.00 3.36
211 212 7.666623 TGAATTCTAAACCACCAATTTCCTTC 58.333 34.615 7.05 0.00 0.00 3.46
212 213 7.508977 TGAATTCTAAACCACCAATTTCCTTCT 59.491 33.333 7.05 0.00 0.00 2.85
213 214 6.648879 TTCTAAACCACCAATTTCCTTCTG 57.351 37.500 0.00 0.00 0.00 3.02
214 215 5.947663 TCTAAACCACCAATTTCCTTCTGA 58.052 37.500 0.00 0.00 0.00 3.27
215 216 6.369629 TCTAAACCACCAATTTCCTTCTGAA 58.630 36.000 0.00 0.00 0.00 3.02
216 217 4.937201 AACCACCAATTTCCTTCTGAAC 57.063 40.909 0.00 0.00 31.05 3.18
217 218 4.184649 ACCACCAATTTCCTTCTGAACT 57.815 40.909 0.00 0.00 31.05 3.01
218 219 4.145052 ACCACCAATTTCCTTCTGAACTC 58.855 43.478 0.00 0.00 31.05 3.01
219 220 3.507622 CCACCAATTTCCTTCTGAACTCC 59.492 47.826 0.00 0.00 31.05 3.85
220 221 4.401925 CACCAATTTCCTTCTGAACTCCT 58.598 43.478 0.00 0.00 31.05 3.69
221 222 4.829492 CACCAATTTCCTTCTGAACTCCTT 59.171 41.667 0.00 0.00 31.05 3.36
222 223 5.302823 CACCAATTTCCTTCTGAACTCCTTT 59.697 40.000 0.00 0.00 31.05 3.11
223 224 5.899547 ACCAATTTCCTTCTGAACTCCTTTT 59.100 36.000 0.00 0.00 31.05 2.27
224 225 6.183360 ACCAATTTCCTTCTGAACTCCTTTTG 60.183 38.462 0.00 0.00 31.05 2.44
225 226 6.040842 CCAATTTCCTTCTGAACTCCTTTTGA 59.959 38.462 0.00 0.00 31.05 2.69
226 227 7.417797 CCAATTTCCTTCTGAACTCCTTTTGAA 60.418 37.037 0.00 0.00 31.05 2.69
227 228 7.846101 ATTTCCTTCTGAACTCCTTTTGAAT 57.154 32.000 0.00 0.00 31.05 2.57
228 229 7.660030 TTTCCTTCTGAACTCCTTTTGAATT 57.340 32.000 0.00 0.00 31.05 2.17
229 230 6.639632 TCCTTCTGAACTCCTTTTGAATTG 57.360 37.500 0.00 0.00 0.00 2.32
230 231 6.364701 TCCTTCTGAACTCCTTTTGAATTGA 58.635 36.000 0.00 0.00 0.00 2.57
231 232 6.833416 TCCTTCTGAACTCCTTTTGAATTGAA 59.167 34.615 0.00 0.00 0.00 2.69
232 233 7.506938 TCCTTCTGAACTCCTTTTGAATTGAAT 59.493 33.333 0.00 0.00 0.00 2.57
233 234 8.796475 CCTTCTGAACTCCTTTTGAATTGAATA 58.204 33.333 0.00 0.00 0.00 1.75
236 237 8.246180 TCTGAACTCCTTTTGAATTGAATATGC 58.754 33.333 0.00 0.00 0.00 3.14
237 238 7.894708 TGAACTCCTTTTGAATTGAATATGCA 58.105 30.769 0.00 0.00 0.00 3.96
238 239 8.366401 TGAACTCCTTTTGAATTGAATATGCAA 58.634 29.630 0.00 0.00 0.00 4.08
239 240 9.206870 GAACTCCTTTTGAATTGAATATGCAAA 57.793 29.630 0.00 0.00 0.00 3.68
240 241 9.558396 AACTCCTTTTGAATTGAATATGCAAAA 57.442 25.926 0.00 10.76 37.06 2.44
241 242 9.558396 ACTCCTTTTGAATTGAATATGCAAAAA 57.442 25.926 0.00 0.00 37.80 1.94
259 260 4.749245 AAAAACACACATCGGAGACATC 57.251 40.909 0.00 0.00 42.51 3.06
260 261 1.996292 AACACACATCGGAGACATCG 58.004 50.000 0.00 0.00 42.51 3.84
261 262 0.458543 ACACACATCGGAGACATCGC 60.459 55.000 0.00 0.00 42.51 4.58
262 263 1.141881 ACACATCGGAGACATCGCC 59.858 57.895 0.00 0.00 42.51 5.54
263 264 1.592669 CACATCGGAGACATCGCCC 60.593 63.158 0.00 0.00 42.51 6.13
264 265 2.058001 ACATCGGAGACATCGCCCA 61.058 57.895 0.00 0.00 42.51 5.36
265 266 1.592669 CATCGGAGACATCGCCCAC 60.593 63.158 0.00 0.00 42.51 4.61
266 267 1.758514 ATCGGAGACATCGCCCACT 60.759 57.895 0.00 0.00 42.51 4.00
267 268 0.467474 ATCGGAGACATCGCCCACTA 60.467 55.000 0.00 0.00 42.51 2.74
268 269 1.101635 TCGGAGACATCGCCCACTAG 61.102 60.000 0.00 0.00 31.66 2.57
269 270 1.068250 GGAGACATCGCCCACTAGC 59.932 63.158 0.00 0.00 0.00 3.42
277 278 2.747855 GCCCACTAGCGCTGCTTT 60.748 61.111 22.90 0.00 40.44 3.51
278 279 2.754995 GCCCACTAGCGCTGCTTTC 61.755 63.158 22.90 0.54 40.44 2.62
279 280 1.078848 CCCACTAGCGCTGCTTTCT 60.079 57.895 22.90 0.00 40.44 2.52
280 281 1.364626 CCCACTAGCGCTGCTTTCTG 61.365 60.000 22.90 5.55 40.44 3.02
281 282 1.364626 CCACTAGCGCTGCTTTCTGG 61.365 60.000 22.90 10.96 40.44 3.86
282 283 1.078848 ACTAGCGCTGCTTTCTGGG 60.079 57.895 22.90 1.23 40.44 4.45
283 284 2.436646 TAGCGCTGCTTTCTGGGC 60.437 61.111 22.90 0.00 45.81 5.36
284 285 3.976701 TAGCGCTGCTTTCTGGGCC 62.977 63.158 22.90 0.00 46.34 5.80
286 287 3.437795 CGCTGCTTTCTGGGCCAG 61.438 66.667 28.01 28.01 0.00 4.85
287 288 3.756727 GCTGCTTTCTGGGCCAGC 61.757 66.667 29.02 18.40 0.00 4.85
288 289 3.066814 CTGCTTTCTGGGCCAGCC 61.067 66.667 29.02 16.04 32.11 4.85
298 299 3.087065 GGCCAGCCCACTTAGGAA 58.913 61.111 0.00 0.00 41.22 3.36
299 300 1.077429 GGCCAGCCCACTTAGGAAG 60.077 63.158 0.00 0.00 41.22 3.46
300 301 1.077429 GCCAGCCCACTTAGGAAGG 60.077 63.158 0.00 0.00 41.22 3.46
301 302 1.077429 CCAGCCCACTTAGGAAGGC 60.077 63.158 1.88 1.88 46.13 4.35
304 305 2.568003 GCCCACTTAGGAAGGCAAC 58.432 57.895 4.86 0.00 45.07 4.17
305 306 1.305930 GCCCACTTAGGAAGGCAACG 61.306 60.000 4.86 0.00 45.07 4.10
306 307 0.676782 CCCACTTAGGAAGGCAACGG 60.677 60.000 0.00 0.00 41.08 4.44
307 308 0.036306 CCACTTAGGAAGGCAACGGT 59.964 55.000 0.00 0.00 41.08 4.83
308 309 1.276989 CCACTTAGGAAGGCAACGGTA 59.723 52.381 0.00 0.00 41.08 4.02
309 310 2.344025 CACTTAGGAAGGCAACGGTAC 58.656 52.381 0.00 0.00 46.39 3.34
310 311 1.277273 ACTTAGGAAGGCAACGGTACC 59.723 52.381 0.16 0.16 46.39 3.34
311 312 1.276989 CTTAGGAAGGCAACGGTACCA 59.723 52.381 13.54 0.00 46.39 3.25
312 313 1.575419 TAGGAAGGCAACGGTACCAT 58.425 50.000 13.54 0.00 46.39 3.55
313 314 0.696501 AGGAAGGCAACGGTACCATT 59.303 50.000 13.54 0.00 46.39 3.16
314 315 1.074889 AGGAAGGCAACGGTACCATTT 59.925 47.619 13.54 0.80 46.39 2.32
315 316 1.890489 GGAAGGCAACGGTACCATTTT 59.110 47.619 13.54 0.00 46.39 1.82
316 317 3.083293 GGAAGGCAACGGTACCATTTTA 58.917 45.455 13.54 0.00 46.39 1.52
317 318 3.506844 GGAAGGCAACGGTACCATTTTAA 59.493 43.478 13.54 0.00 46.39 1.52
318 319 4.478699 GAAGGCAACGGTACCATTTTAAC 58.521 43.478 13.54 0.00 46.39 2.01
319 320 3.758425 AGGCAACGGTACCATTTTAACT 58.242 40.909 13.54 0.00 46.39 2.24
320 321 3.504520 AGGCAACGGTACCATTTTAACTG 59.495 43.478 13.54 0.00 46.39 3.16
321 322 3.502979 GGCAACGGTACCATTTTAACTGA 59.497 43.478 13.54 0.00 0.00 3.41
322 323 4.157105 GGCAACGGTACCATTTTAACTGAT 59.843 41.667 13.54 0.00 0.00 2.90
323 324 5.329493 GCAACGGTACCATTTTAACTGATC 58.671 41.667 13.54 0.00 0.00 2.92
324 325 5.123344 GCAACGGTACCATTTTAACTGATCT 59.877 40.000 13.54 0.00 0.00 2.75
325 326 6.349033 GCAACGGTACCATTTTAACTGATCTT 60.349 38.462 13.54 0.00 0.00 2.40
326 327 6.980051 ACGGTACCATTTTAACTGATCTTC 57.020 37.500 13.54 0.00 0.00 2.87
327 328 6.469410 ACGGTACCATTTTAACTGATCTTCA 58.531 36.000 13.54 0.00 0.00 3.02
355 356 6.111669 GTTCTAGAACCTTCTACCTGGTTT 57.888 41.667 22.74 0.00 45.48 3.27
356 357 6.531923 GTTCTAGAACCTTCTACCTGGTTTT 58.468 40.000 22.74 0.00 45.48 2.43
357 358 6.356186 TCTAGAACCTTCTACCTGGTTTTC 57.644 41.667 3.84 0.00 45.48 2.29
358 359 4.004196 AGAACCTTCTACCTGGTTTTCG 57.996 45.455 3.84 0.00 45.48 3.46
359 360 3.644738 AGAACCTTCTACCTGGTTTTCGA 59.355 43.478 3.84 0.00 45.48 3.71
360 361 4.102054 AGAACCTTCTACCTGGTTTTCGAA 59.898 41.667 3.84 0.00 45.48 3.71
361 362 4.004196 ACCTTCTACCTGGTTTTCGAAG 57.996 45.455 3.84 11.80 31.62 3.79
362 363 3.644738 ACCTTCTACCTGGTTTTCGAAGA 59.355 43.478 20.04 9.16 31.62 2.87
363 364 4.286291 ACCTTCTACCTGGTTTTCGAAGAT 59.714 41.667 20.04 8.34 30.67 2.40
364 365 5.221864 ACCTTCTACCTGGTTTTCGAAGATT 60.222 40.000 20.04 10.21 30.67 2.40
365 366 5.351740 CCTTCTACCTGGTTTTCGAAGATTC 59.648 44.000 20.04 0.00 35.04 2.52
366 367 5.740290 TCTACCTGGTTTTCGAAGATTCT 57.260 39.130 3.84 0.00 35.04 2.40
367 368 6.845758 TCTACCTGGTTTTCGAAGATTCTA 57.154 37.500 3.84 0.00 35.04 2.10
368 369 6.864342 TCTACCTGGTTTTCGAAGATTCTAG 58.136 40.000 3.84 0.00 35.04 2.43
369 370 5.740290 ACCTGGTTTTCGAAGATTCTAGA 57.260 39.130 0.00 0.00 35.04 2.43
370 371 6.110411 ACCTGGTTTTCGAAGATTCTAGAA 57.890 37.500 7.82 7.82 35.04 2.10
371 372 6.166982 ACCTGGTTTTCGAAGATTCTAGAAG 58.833 40.000 11.53 0.00 35.04 2.85
372 373 5.582665 CCTGGTTTTCGAAGATTCTAGAAGG 59.417 44.000 11.53 0.00 35.04 3.46
373 374 6.110411 TGGTTTTCGAAGATTCTAGAAGGT 57.890 37.500 11.53 0.00 35.04 3.50
374 375 6.164176 TGGTTTTCGAAGATTCTAGAAGGTC 58.836 40.000 11.53 4.69 35.04 3.85
375 376 6.014499 TGGTTTTCGAAGATTCTAGAAGGTCT 60.014 38.462 11.53 7.03 35.04 3.85
376 377 6.874664 GGTTTTCGAAGATTCTAGAAGGTCTT 59.125 38.462 17.42 17.42 35.04 3.01
377 378 7.148557 GGTTTTCGAAGATTCTAGAAGGTCTTG 60.149 40.741 20.85 14.49 35.04 3.02
378 379 6.591750 TTCGAAGATTCTAGAAGGTCTTGT 57.408 37.500 20.85 3.72 35.04 3.16
379 380 6.591750 TCGAAGATTCTAGAAGGTCTTGTT 57.408 37.500 20.85 5.76 31.51 2.83
380 381 6.622549 TCGAAGATTCTAGAAGGTCTTGTTC 58.377 40.000 20.85 12.35 31.51 3.18
381 382 6.208797 TCGAAGATTCTAGAAGGTCTTGTTCA 59.791 38.462 20.85 4.64 31.51 3.18
382 383 6.309251 CGAAGATTCTAGAAGGTCTTGTTCAC 59.691 42.308 20.85 9.12 31.51 3.18
383 384 6.926630 AGATTCTAGAAGGTCTTGTTCACT 57.073 37.500 11.53 0.00 0.00 3.41
384 385 6.696411 AGATTCTAGAAGGTCTTGTTCACTG 58.304 40.000 11.53 0.00 0.00 3.66
385 386 5.871396 TTCTAGAAGGTCTTGTTCACTGT 57.129 39.130 0.00 0.00 0.00 3.55
386 387 5.201713 TCTAGAAGGTCTTGTTCACTGTG 57.798 43.478 0.17 0.17 0.00 3.66
387 388 3.914426 AGAAGGTCTTGTTCACTGTGT 57.086 42.857 7.79 0.00 0.00 3.72
388 389 4.222124 AGAAGGTCTTGTTCACTGTGTT 57.778 40.909 7.79 0.00 0.00 3.32
389 390 4.589908 AGAAGGTCTTGTTCACTGTGTTT 58.410 39.130 7.79 0.00 0.00 2.83
390 391 5.010282 AGAAGGTCTTGTTCACTGTGTTTT 58.990 37.500 7.79 0.00 0.00 2.43
391 392 5.476945 AGAAGGTCTTGTTCACTGTGTTTTT 59.523 36.000 7.79 0.00 0.00 1.94
392 393 5.059404 AGGTCTTGTTCACTGTGTTTTTG 57.941 39.130 7.79 0.00 0.00 2.44
393 394 4.522789 AGGTCTTGTTCACTGTGTTTTTGT 59.477 37.500 7.79 0.00 0.00 2.83
394 395 5.010617 AGGTCTTGTTCACTGTGTTTTTGTT 59.989 36.000 7.79 0.00 0.00 2.83
395 396 5.694458 GGTCTTGTTCACTGTGTTTTTGTTT 59.306 36.000 7.79 0.00 0.00 2.83
396 397 6.201997 GGTCTTGTTCACTGTGTTTTTGTTTT 59.798 34.615 7.79 0.00 0.00 2.43
397 398 7.280769 GTCTTGTTCACTGTGTTTTTGTTTTC 58.719 34.615 7.79 0.00 0.00 2.29
398 399 7.169140 GTCTTGTTCACTGTGTTTTTGTTTTCT 59.831 33.333 7.79 0.00 0.00 2.52
399 400 7.381139 TCTTGTTCACTGTGTTTTTGTTTTCTC 59.619 33.333 7.79 0.00 0.00 2.87
400 401 6.744112 TGTTCACTGTGTTTTTGTTTTCTCT 58.256 32.000 7.79 0.00 0.00 3.10
401 402 7.206687 TGTTCACTGTGTTTTTGTTTTCTCTT 58.793 30.769 7.79 0.00 0.00 2.85
402 403 7.708752 TGTTCACTGTGTTTTTGTTTTCTCTTT 59.291 29.630 7.79 0.00 0.00 2.52
403 404 7.636259 TCACTGTGTTTTTGTTTTCTCTTTG 57.364 32.000 7.79 0.00 0.00 2.77
404 405 7.206687 TCACTGTGTTTTTGTTTTCTCTTTGT 58.793 30.769 7.79 0.00 0.00 2.83
405 406 7.708752 TCACTGTGTTTTTGTTTTCTCTTTGTT 59.291 29.630 7.79 0.00 0.00 2.83
406 407 8.334632 CACTGTGTTTTTGTTTTCTCTTTGTTT 58.665 29.630 0.00 0.00 0.00 2.83
407 408 8.888716 ACTGTGTTTTTGTTTTCTCTTTGTTTT 58.111 25.926 0.00 0.00 0.00 2.43
408 409 9.368921 CTGTGTTTTTGTTTTCTCTTTGTTTTC 57.631 29.630 0.00 0.00 0.00 2.29
409 410 9.103861 TGTGTTTTTGTTTTCTCTTTGTTTTCT 57.896 25.926 0.00 0.00 0.00 2.52
410 411 9.929722 GTGTTTTTGTTTTCTCTTTGTTTTCTT 57.070 25.926 0.00 0.00 0.00 2.52
467 468 9.896645 ATTAGTGAAGATATGTCAAACTCATGT 57.103 29.630 0.00 0.00 0.00 3.21
469 470 8.709386 AGTGAAGATATGTCAAACTCATGTAC 57.291 34.615 0.00 0.00 0.00 2.90
470 471 8.314021 AGTGAAGATATGTCAAACTCATGTACA 58.686 33.333 0.00 0.00 0.00 2.90
471 472 9.102757 GTGAAGATATGTCAAACTCATGTACAT 57.897 33.333 1.41 1.41 35.16 2.29
472 473 9.671279 TGAAGATATGTCAAACTCATGTACATT 57.329 29.630 5.37 0.00 33.15 2.71
478 479 7.340122 TGTCAAACTCATGTACATTTTTCCA 57.660 32.000 5.37 1.50 0.00 3.53
479 480 7.950512 TGTCAAACTCATGTACATTTTTCCAT 58.049 30.769 5.37 0.00 0.00 3.41
480 481 8.420222 TGTCAAACTCATGTACATTTTTCCATT 58.580 29.630 5.37 0.00 0.00 3.16
481 482 9.260002 GTCAAACTCATGTACATTTTTCCATTT 57.740 29.630 5.37 0.00 0.00 2.32
482 483 9.829507 TCAAACTCATGTACATTTTTCCATTTT 57.170 25.926 5.37 0.00 0.00 1.82
662 663 8.862550 AAAAATTGAACTCACAGACATTTCTC 57.137 30.769 0.00 0.00 0.00 2.87
663 664 7.572523 AAATTGAACTCACAGACATTTCTCA 57.427 32.000 0.00 0.00 0.00 3.27
664 665 7.572523 AATTGAACTCACAGACATTTCTCAA 57.427 32.000 0.00 0.00 0.00 3.02
665 666 7.756395 ATTGAACTCACAGACATTTCTCAAT 57.244 32.000 0.00 0.00 0.00 2.57
666 667 7.572523 TTGAACTCACAGACATTTCTCAATT 57.427 32.000 0.00 0.00 0.00 2.32
667 668 8.675705 TTGAACTCACAGACATTTCTCAATTA 57.324 30.769 0.00 0.00 0.00 1.40
668 669 8.315391 TGAACTCACAGACATTTCTCAATTAG 57.685 34.615 0.00 0.00 0.00 1.73
669 670 7.933577 TGAACTCACAGACATTTCTCAATTAGT 59.066 33.333 0.00 0.00 0.00 2.24
670 671 7.664082 ACTCACAGACATTTCTCAATTAGTG 57.336 36.000 0.00 0.00 0.00 2.74
671 672 6.652481 ACTCACAGACATTTCTCAATTAGTGG 59.348 38.462 0.00 0.00 0.00 4.00
672 673 6.768483 TCACAGACATTTCTCAATTAGTGGA 58.232 36.000 0.00 0.00 0.00 4.02
673 674 6.650807 TCACAGACATTTCTCAATTAGTGGAC 59.349 38.462 0.00 0.00 0.00 4.02
674 675 6.427853 CACAGACATTTCTCAATTAGTGGACA 59.572 38.462 0.00 0.00 0.00 4.02
675 676 7.120285 CACAGACATTTCTCAATTAGTGGACAT 59.880 37.037 0.00 0.00 0.00 3.06
676 677 7.667219 ACAGACATTTCTCAATTAGTGGACATT 59.333 33.333 0.00 0.00 0.00 2.71
677 678 8.517878 CAGACATTTCTCAATTAGTGGACATTT 58.482 33.333 0.00 0.00 0.00 2.32
678 679 9.082313 AGACATTTCTCAATTAGTGGACATTTT 57.918 29.630 0.00 0.00 0.00 1.82
679 680 9.696917 GACATTTCTCAATTAGTGGACATTTTT 57.303 29.630 0.00 0.00 0.00 1.94
719 720 8.664211 TTTTAAATTGGCAAATTTTAGTCCGT 57.336 26.923 16.82 0.00 42.14 4.69
720 721 7.644986 TTAAATTGGCAAATTTTAGTCCGTG 57.355 32.000 16.82 0.00 42.14 4.94
721 722 3.651803 TTGGCAAATTTTAGTCCGTGG 57.348 42.857 0.00 0.00 0.00 4.94
722 723 2.865079 TGGCAAATTTTAGTCCGTGGA 58.135 42.857 0.00 0.00 0.00 4.02
723 724 3.223435 TGGCAAATTTTAGTCCGTGGAA 58.777 40.909 0.00 0.00 0.00 3.53
724 725 3.637229 TGGCAAATTTTAGTCCGTGGAAA 59.363 39.130 0.00 0.00 0.00 3.13
725 726 4.282195 TGGCAAATTTTAGTCCGTGGAAAT 59.718 37.500 0.00 0.00 0.00 2.17
726 727 5.477291 TGGCAAATTTTAGTCCGTGGAAATA 59.523 36.000 0.00 0.00 0.00 1.40
727 728 6.153680 TGGCAAATTTTAGTCCGTGGAAATAT 59.846 34.615 0.00 0.00 0.00 1.28
728 729 7.039270 GGCAAATTTTAGTCCGTGGAAATATT 58.961 34.615 0.00 0.00 0.00 1.28
729 730 7.547722 GGCAAATTTTAGTCCGTGGAAATATTT 59.452 33.333 0.00 0.00 0.00 1.40
730 731 8.592155 GCAAATTTTAGTCCGTGGAAATATTTC 58.408 33.333 18.22 18.22 36.46 2.17
731 732 9.632807 CAAATTTTAGTCCGTGGAAATATTTCA 57.367 29.630 25.55 11.94 38.92 2.69
735 736 9.849166 TTTTAGTCCGTGGAAATATTTCAATTC 57.151 29.630 25.55 11.62 38.92 2.17
736 737 8.568676 TTAGTCCGTGGAAATATTTCAATTCA 57.431 30.769 25.55 13.77 38.92 2.57
737 738 7.645058 AGTCCGTGGAAATATTTCAATTCAT 57.355 32.000 25.55 6.78 38.92 2.57
738 739 7.483307 AGTCCGTGGAAATATTTCAATTCATG 58.517 34.615 25.55 18.72 38.92 3.07
739 740 7.339212 AGTCCGTGGAAATATTTCAATTCATGA 59.661 33.333 25.55 13.54 38.92 3.07
740 741 7.973388 GTCCGTGGAAATATTTCAATTCATGAA 59.027 33.333 25.55 11.26 46.22 2.57
777 778 4.493547 TCCGATCATGTTTTCAATTTGCC 58.506 39.130 0.00 0.00 0.00 4.52
1005 1029 1.425031 CACGTAGGTGCGCGTAGTA 59.575 57.895 8.43 0.00 39.48 1.82
1043 1087 3.262420 CAGTGGTTAGGTCTCCATTTCG 58.738 50.000 0.00 0.00 36.09 3.46
1044 1088 2.904434 AGTGGTTAGGTCTCCATTTCGT 59.096 45.455 0.00 0.00 36.09 3.85
1045 1089 3.326880 AGTGGTTAGGTCTCCATTTCGTT 59.673 43.478 0.00 0.00 36.09 3.85
1046 1090 3.683340 GTGGTTAGGTCTCCATTTCGTTC 59.317 47.826 0.00 0.00 36.09 3.95
1079 1131 3.070576 GCCATGGCTTCCCACCAC 61.071 66.667 29.98 0.00 45.77 4.16
1134 1192 0.460284 CGCTCGAACCACCATAAGCT 60.460 55.000 0.00 0.00 0.00 3.74
1171 1229 1.752436 GCTCCGAGAGATCTTCCTCCA 60.752 57.143 0.00 0.00 33.76 3.86
1223 1283 4.947147 TTCACCTGCCGCGCCTTT 62.947 61.111 0.00 0.00 0.00 3.11
1322 1382 2.598394 ACACCCTGCATGCACACC 60.598 61.111 18.46 0.00 0.00 4.16
1325 1388 3.740397 CCCTGCATGCACACCGTG 61.740 66.667 18.46 5.77 36.51 4.94
1374 1440 2.367202 GCCGGATTCAGTCCCCTCA 61.367 63.158 5.05 0.00 44.77 3.86
1384 1456 1.606889 GTCCCCTCAGAGACCACGT 60.607 63.158 0.00 0.00 0.00 4.49
1469 1556 1.573829 GCATCGAAAACCGGAGCACA 61.574 55.000 9.46 0.00 37.99 4.57
1691 1778 1.689273 GAGTGGCAGATCTTACCGGAT 59.311 52.381 9.46 0.00 0.00 4.18
1931 2402 5.506686 TCTGTATCGTCATTGAGAAGGAG 57.493 43.478 0.00 0.00 0.00 3.69
1987 3185 1.696832 GACGGCGTCCAGAGATTTGC 61.697 60.000 28.72 0.00 0.00 3.68
2007 3205 2.356553 TGCACAGTACGTTCCCGC 60.357 61.111 0.00 0.00 37.70 6.13
2159 3359 0.987294 CCCCTGAGTGGTTCATGTCT 59.013 55.000 0.00 0.00 34.68 3.41
2385 3603 5.471116 TGATGTATTGCTGTGAAGATATGCC 59.529 40.000 0.00 0.00 0.00 4.40
2391 3609 2.735663 GCTGTGAAGATATGCCATCGAG 59.264 50.000 0.00 0.00 0.00 4.04
2612 3965 8.184304 ACTACCTCTGATCCATAATAAGTGTC 57.816 38.462 0.00 0.00 0.00 3.67
2615 3968 5.509670 CCTCTGATCCATAATAAGTGTCGCA 60.510 44.000 0.00 0.00 0.00 5.10
2616 3969 5.532557 TCTGATCCATAATAAGTGTCGCAG 58.467 41.667 0.00 0.00 0.00 5.18
2618 3971 5.670485 TGATCCATAATAAGTGTCGCAGTT 58.330 37.500 5.48 5.48 0.00 3.16
2619 3972 6.112734 TGATCCATAATAAGTGTCGCAGTTT 58.887 36.000 5.46 0.00 0.00 2.66
2620 3973 6.597672 TGATCCATAATAAGTGTCGCAGTTTT 59.402 34.615 5.46 3.95 0.00 2.43
2621 3974 6.176975 TCCATAATAAGTGTCGCAGTTTTG 57.823 37.500 5.46 1.31 0.00 2.44
2622 3975 5.935206 TCCATAATAAGTGTCGCAGTTTTGA 59.065 36.000 5.46 0.00 0.00 2.69
2627 3980 4.795970 AAGTGTCGCAGTTTTGAACTAG 57.204 40.909 0.00 0.00 40.46 2.57
2628 3981 2.544267 AGTGTCGCAGTTTTGAACTAGC 59.456 45.455 0.00 0.36 40.46 3.42
2629 3982 1.871039 TGTCGCAGTTTTGAACTAGCC 59.129 47.619 0.00 0.00 40.46 3.93
2630 3983 1.197036 GTCGCAGTTTTGAACTAGCCC 59.803 52.381 0.00 0.00 40.46 5.19
2631 3984 0.521735 CGCAGTTTTGAACTAGCCCC 59.478 55.000 0.00 0.00 40.46 5.80
2632 3985 1.616159 GCAGTTTTGAACTAGCCCCA 58.384 50.000 0.00 0.00 40.46 4.96
2633 3986 1.541588 GCAGTTTTGAACTAGCCCCAG 59.458 52.381 0.00 0.00 40.46 4.45
2635 3988 3.222603 CAGTTTTGAACTAGCCCCAGTT 58.777 45.455 0.00 0.00 40.46 3.16
2665 4018 7.895759 ACTGCAACACTTATTTTGTATTGGAT 58.104 30.769 0.00 0.00 0.00 3.41
2738 4101 9.938280 TTGGAGGGTTTAGATTATATGATAACG 57.062 33.333 0.00 0.00 0.00 3.18
2886 5216 0.549469 ACCCAAAGTGGTCGAAACCT 59.451 50.000 0.00 0.00 46.60 3.50
2887 5217 1.064240 ACCCAAAGTGGTCGAAACCTT 60.064 47.619 0.00 0.00 46.60 3.50
2891 5221 0.109913 AAGTGGTCGAAACCTTCCCC 59.890 55.000 0.00 0.00 46.60 4.81
2892 5222 0.767060 AGTGGTCGAAACCTTCCCCT 60.767 55.000 0.00 0.00 46.60 4.79
3145 6274 7.730364 TTTTTCCTGTCTTCTACATCAGTTC 57.270 36.000 0.00 0.00 37.50 3.01
3258 6403 5.512753 TTCAAGCTTTGCATTCAACTGTA 57.487 34.783 0.00 0.00 30.75 2.74
3262 6407 5.368256 AGCTTTGCATTCAACTGTAAGAG 57.632 39.130 0.00 0.00 37.43 2.85
3429 6677 7.736447 AGAAAAAGACTGTCCAAGAATAGTG 57.264 36.000 3.76 0.00 0.00 2.74
3620 6883 7.282585 CAATTGGATAGAGGAGTTTGTATCCA 58.717 38.462 7.56 7.56 46.00 3.41
3624 6887 8.742125 TGGATAGAGGAGTTTGTATCCAATAT 57.258 34.615 8.85 0.00 45.14 1.28
3677 6940 8.524487 TGTTAAAGCCAATTAAATATCAACCGT 58.476 29.630 0.00 0.00 0.00 4.83
3739 7002 5.049405 CCAGATACTGGTTTGTCACTTTGAC 60.049 44.000 9.36 0.00 45.82 3.18
3863 7142 7.335422 CAGCAGAGTTAAAATGTTCTAGATGGT 59.665 37.037 0.00 0.00 0.00 3.55
3943 7257 5.080337 TGATCTGTATCACATACTCCCTCC 58.920 45.833 0.00 0.00 37.20 4.30
3946 7260 3.637229 CTGTATCACATACTCCCTCCGTT 59.363 47.826 0.00 0.00 36.70 4.44
4038 7362 2.068837 TTCCGCGACAAGTAATTCGT 57.931 45.000 8.23 0.00 37.56 3.85
4047 7371 2.298163 ACAAGTAATTCGTGACGGAGGT 59.702 45.455 4.70 0.00 0.00 3.85
4354 7678 7.500720 TTATTGATAACCGTGAGAGATCGTA 57.499 36.000 0.00 0.00 0.00 3.43
4597 7927 0.320421 GTTGGCGTCCTGAGTGCTTA 60.320 55.000 0.00 0.00 0.00 3.09
4646 7976 0.835971 TGGTTGAGGCAGCTGGAGTA 60.836 55.000 17.12 0.00 0.00 2.59
4669 7999 3.908103 AGCAAGGAGTTTAGTCAAGGGTA 59.092 43.478 0.00 0.00 0.00 3.69
4676 8006 1.952621 TTAGTCAAGGGTAGCTGCCT 58.047 50.000 21.02 3.87 0.00 4.75
4687 8017 1.345741 GTAGCTGCCTGATGCCATCTA 59.654 52.381 6.21 0.00 40.16 1.98
4768 8190 3.009723 ACATTCAGGCGATACTGTTTGG 58.990 45.455 0.00 0.00 39.48 3.28
4834 8305 3.889196 TGTTGAAATGCGTTGGTACTC 57.111 42.857 0.00 0.00 0.00 2.59
5033 8530 2.849294 ACTGGTGCTTCTTCTTCTCC 57.151 50.000 0.00 0.00 0.00 3.71
5144 8645 5.607477 TGAAGGTCATATAAGTAAAGGCGG 58.393 41.667 0.00 0.00 0.00 6.13
5149 8650 4.989168 GTCATATAAGTAAAGGCGGGTGAG 59.011 45.833 0.00 0.00 0.00 3.51
5243 8903 5.806286 TCATAACTGCGCTGCTATTTTTAC 58.194 37.500 14.80 0.00 0.00 2.01
5291 8951 3.181434 TGGTCAGGTTTATTCAGGTTGCT 60.181 43.478 0.00 0.00 0.00 3.91
5299 8959 1.538687 ATTCAGGTTGCTGCAAGGGC 61.539 55.000 16.53 4.02 41.68 5.19
5338 9007 0.685097 TTACTCTGGAGTGTGCACCC 59.315 55.000 15.69 9.14 42.52 4.61
5339 9008 1.192146 TACTCTGGAGTGTGCACCCC 61.192 60.000 15.69 13.30 42.52 4.95
5340 9009 2.122413 TCTGGAGTGTGCACCCCT 60.122 61.111 15.69 10.28 29.61 4.79
5367 9260 3.893763 CGAGGGAGCGCAGACGAT 61.894 66.667 11.47 0.00 43.93 3.73
5368 9261 2.279120 GAGGGAGCGCAGACGATG 60.279 66.667 11.47 0.00 43.93 3.84
5398 9294 5.480642 TTGTGAACAAATGGTTATGGCAT 57.519 34.783 4.88 4.88 40.63 4.40
5429 9325 3.788227 AACATTGGGAGCAGTAGACAA 57.212 42.857 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.986157 CCATAGTAGGAGTAATATAGGTGGTAA 57.014 37.037 0.00 0.00 0.00 2.85
47 48 8.057623 GCCATAGTAGGAGTAATATAGGTGGTA 58.942 40.741 0.00 0.00 0.00 3.25
48 49 6.896307 GCCATAGTAGGAGTAATATAGGTGGT 59.104 42.308 0.00 0.00 0.00 4.16
49 50 7.126733 AGCCATAGTAGGAGTAATATAGGTGG 58.873 42.308 0.00 0.00 0.00 4.61
50 51 9.344772 CTAGCCATAGTAGGAGTAATATAGGTG 57.655 40.741 0.00 0.00 0.00 4.00
51 52 9.071334 ACTAGCCATAGTAGGAGTAATATAGGT 57.929 37.037 0.00 0.00 40.57 3.08
52 53 9.563748 GACTAGCCATAGTAGGAGTAATATAGG 57.436 40.741 0.00 0.00 42.46 2.57
55 56 8.837737 TCAGACTAGCCATAGTAGGAGTAATAT 58.162 37.037 0.00 0.00 42.46 1.28
56 57 8.215954 TCAGACTAGCCATAGTAGGAGTAATA 57.784 38.462 0.00 0.00 42.46 0.98
57 58 7.092748 TCAGACTAGCCATAGTAGGAGTAAT 57.907 40.000 0.00 0.00 42.46 1.89
58 59 6.101442 ACTCAGACTAGCCATAGTAGGAGTAA 59.899 42.308 14.74 0.00 44.98 2.24
59 60 5.607592 ACTCAGACTAGCCATAGTAGGAGTA 59.392 44.000 14.74 0.00 44.98 2.59
60 61 4.414182 ACTCAGACTAGCCATAGTAGGAGT 59.586 45.833 12.25 12.25 43.61 3.85
61 62 4.980573 ACTCAGACTAGCCATAGTAGGAG 58.019 47.826 11.37 11.37 42.46 3.69
62 63 5.390087 AACTCAGACTAGCCATAGTAGGA 57.610 43.478 0.00 0.00 42.46 2.94
63 64 5.221342 CCAAACTCAGACTAGCCATAGTAGG 60.221 48.000 0.00 0.00 42.46 3.18
64 65 5.737635 GCCAAACTCAGACTAGCCATAGTAG 60.738 48.000 0.00 0.00 42.46 2.57
65 66 4.099573 GCCAAACTCAGACTAGCCATAGTA 59.900 45.833 0.00 0.00 42.46 1.82
66 67 3.118592 GCCAAACTCAGACTAGCCATAGT 60.119 47.826 0.00 0.00 45.16 2.12
67 68 3.133721 AGCCAAACTCAGACTAGCCATAG 59.866 47.826 0.00 0.00 34.96 2.23
68 69 3.107601 AGCCAAACTCAGACTAGCCATA 58.892 45.455 0.00 0.00 0.00 2.74
69 70 1.912043 AGCCAAACTCAGACTAGCCAT 59.088 47.619 0.00 0.00 0.00 4.40
70 71 1.352083 AGCCAAACTCAGACTAGCCA 58.648 50.000 0.00 0.00 0.00 4.75
71 72 2.481289 AAGCCAAACTCAGACTAGCC 57.519 50.000 0.00 0.00 0.00 3.93
72 73 3.142174 ACAAAGCCAAACTCAGACTAGC 58.858 45.455 0.00 0.00 0.00 3.42
73 74 4.816385 TCAACAAAGCCAAACTCAGACTAG 59.184 41.667 0.00 0.00 0.00 2.57
74 75 4.776349 TCAACAAAGCCAAACTCAGACTA 58.224 39.130 0.00 0.00 0.00 2.59
75 76 3.620488 TCAACAAAGCCAAACTCAGACT 58.380 40.909 0.00 0.00 0.00 3.24
76 77 4.574599 ATCAACAAAGCCAAACTCAGAC 57.425 40.909 0.00 0.00 0.00 3.51
77 78 5.126869 TGAAATCAACAAAGCCAAACTCAGA 59.873 36.000 0.00 0.00 0.00 3.27
78 79 5.350633 TGAAATCAACAAAGCCAAACTCAG 58.649 37.500 0.00 0.00 0.00 3.35
79 80 5.336150 TGAAATCAACAAAGCCAAACTCA 57.664 34.783 0.00 0.00 0.00 3.41
80 81 6.457851 GATGAAATCAACAAAGCCAAACTC 57.542 37.500 0.00 0.00 44.70 3.01
93 94 3.058570 CGACAAACGGGTGATGAAATCAA 60.059 43.478 0.00 0.00 46.46 2.57
94 95 2.482336 CGACAAACGGGTGATGAAATCA 59.518 45.455 0.00 0.00 44.41 2.57
95 96 2.739913 TCGACAAACGGGTGATGAAATC 59.260 45.455 0.00 0.00 42.64 2.17
96 97 2.742053 CTCGACAAACGGGTGATGAAAT 59.258 45.455 0.00 0.00 42.82 2.17
97 98 2.139917 CTCGACAAACGGGTGATGAAA 58.860 47.619 0.00 0.00 42.82 2.69
98 99 1.341852 TCTCGACAAACGGGTGATGAA 59.658 47.619 0.00 0.00 43.73 2.57
99 100 0.963225 TCTCGACAAACGGGTGATGA 59.037 50.000 0.00 0.00 43.73 2.92
100 101 1.660607 CATCTCGACAAACGGGTGATG 59.339 52.381 0.00 0.00 43.73 3.07
101 102 2.007049 GCATCTCGACAAACGGGTGAT 61.007 52.381 0.00 0.00 43.73 3.06
102 103 0.669318 GCATCTCGACAAACGGGTGA 60.669 55.000 0.00 0.00 43.73 4.02
103 104 1.635663 GGCATCTCGACAAACGGGTG 61.636 60.000 0.00 0.00 43.73 4.61
104 105 1.375523 GGCATCTCGACAAACGGGT 60.376 57.895 0.00 0.00 43.73 5.28
105 106 2.452813 CGGCATCTCGACAAACGGG 61.453 63.158 0.00 0.00 44.81 5.28
106 107 3.081133 CGGCATCTCGACAAACGG 58.919 61.111 0.00 0.00 42.82 4.44
107 108 2.094659 AGCGGCATCTCGACAAACG 61.095 57.895 1.45 0.00 44.09 3.60
108 109 1.421485 CAGCGGCATCTCGACAAAC 59.579 57.895 1.45 0.00 0.00 2.93
109 110 2.390599 GCAGCGGCATCTCGACAAA 61.391 57.895 3.18 0.00 40.72 2.83
110 111 2.786539 AAGCAGCGGCATCTCGACAA 62.787 55.000 12.44 0.00 44.61 3.18
111 112 2.786539 AAAGCAGCGGCATCTCGACA 62.787 55.000 12.44 0.00 44.61 4.35
112 113 2.103042 AAAGCAGCGGCATCTCGAC 61.103 57.895 12.44 0.00 44.61 4.20
113 114 2.102438 CAAAGCAGCGGCATCTCGA 61.102 57.895 12.44 0.00 44.61 4.04
114 115 2.402388 CAAAGCAGCGGCATCTCG 59.598 61.111 12.44 0.00 44.61 4.04
115 116 2.101770 GCAAAGCAGCGGCATCTC 59.898 61.111 12.44 0.00 44.61 2.75
123 124 4.410743 GTCAGCCCGCAAAGCAGC 62.411 66.667 0.00 0.00 0.00 5.25
124 125 3.741476 GGTCAGCCCGCAAAGCAG 61.741 66.667 0.00 0.00 0.00 4.24
125 126 3.790416 AAGGTCAGCCCGCAAAGCA 62.790 57.895 0.00 0.00 38.74 3.91
126 127 2.087462 AAAAGGTCAGCCCGCAAAGC 62.087 55.000 0.00 0.00 38.74 3.51
127 128 0.039165 GAAAAGGTCAGCCCGCAAAG 60.039 55.000 0.00 0.00 38.74 2.77
128 129 0.467290 AGAAAAGGTCAGCCCGCAAA 60.467 50.000 0.00 0.00 38.74 3.68
129 130 0.467290 AAGAAAAGGTCAGCCCGCAA 60.467 50.000 0.00 0.00 38.74 4.85
130 131 0.889186 GAAGAAAAGGTCAGCCCGCA 60.889 55.000 0.00 0.00 38.74 5.69
131 132 0.606673 AGAAGAAAAGGTCAGCCCGC 60.607 55.000 0.00 0.00 38.74 6.13
132 133 2.762535 TAGAAGAAAAGGTCAGCCCG 57.237 50.000 0.00 0.00 38.74 6.13
133 134 3.948473 GGATTAGAAGAAAAGGTCAGCCC 59.052 47.826 0.00 0.00 34.57 5.19
134 135 4.849518 AGGATTAGAAGAAAAGGTCAGCC 58.150 43.478 0.00 0.00 0.00 4.85
135 136 6.431234 TGAAAGGATTAGAAGAAAAGGTCAGC 59.569 38.462 0.00 0.00 0.00 4.26
136 137 7.986085 TGAAAGGATTAGAAGAAAAGGTCAG 57.014 36.000 0.00 0.00 0.00 3.51
137 138 8.796475 CATTGAAAGGATTAGAAGAAAAGGTCA 58.204 33.333 0.00 0.00 0.00 4.02
138 139 8.246871 CCATTGAAAGGATTAGAAGAAAAGGTC 58.753 37.037 0.00 0.00 0.00 3.85
139 140 7.730332 ACCATTGAAAGGATTAGAAGAAAAGGT 59.270 33.333 0.00 0.00 0.00 3.50
140 141 8.127150 ACCATTGAAAGGATTAGAAGAAAAGG 57.873 34.615 0.00 0.00 0.00 3.11
141 142 8.796475 TGACCATTGAAAGGATTAGAAGAAAAG 58.204 33.333 0.00 0.00 0.00 2.27
142 143 8.704849 TGACCATTGAAAGGATTAGAAGAAAA 57.295 30.769 0.00 0.00 0.00 2.29
143 144 8.576442 GTTGACCATTGAAAGGATTAGAAGAAA 58.424 33.333 0.00 0.00 0.00 2.52
144 145 7.944554 AGTTGACCATTGAAAGGATTAGAAGAA 59.055 33.333 0.00 0.00 0.00 2.52
145 146 7.461749 AGTTGACCATTGAAAGGATTAGAAGA 58.538 34.615 0.00 0.00 0.00 2.87
146 147 7.148171 GGAGTTGACCATTGAAAGGATTAGAAG 60.148 40.741 0.00 0.00 0.00 2.85
147 148 6.659242 GGAGTTGACCATTGAAAGGATTAGAA 59.341 38.462 0.00 0.00 0.00 2.10
148 149 6.012508 AGGAGTTGACCATTGAAAGGATTAGA 60.013 38.462 0.00 0.00 0.00 2.10
149 150 6.183347 AGGAGTTGACCATTGAAAGGATTAG 58.817 40.000 0.00 0.00 0.00 1.73
150 151 6.012508 AGAGGAGTTGACCATTGAAAGGATTA 60.013 38.462 0.00 0.00 0.00 1.75
151 152 5.003096 AGGAGTTGACCATTGAAAGGATT 57.997 39.130 0.00 0.00 0.00 3.01
152 153 4.290722 AGAGGAGTTGACCATTGAAAGGAT 59.709 41.667 0.00 0.00 0.00 3.24
153 154 3.652869 AGAGGAGTTGACCATTGAAAGGA 59.347 43.478 0.00 0.00 0.00 3.36
154 155 4.026356 AGAGGAGTTGACCATTGAAAGG 57.974 45.455 0.00 0.00 0.00 3.11
155 156 4.457257 GGAAGAGGAGTTGACCATTGAAAG 59.543 45.833 0.00 0.00 0.00 2.62
156 157 4.104738 AGGAAGAGGAGTTGACCATTGAAA 59.895 41.667 0.00 0.00 0.00 2.69
157 158 3.652869 AGGAAGAGGAGTTGACCATTGAA 59.347 43.478 0.00 0.00 0.00 2.69
158 159 3.251484 AGGAAGAGGAGTTGACCATTGA 58.749 45.455 0.00 0.00 0.00 2.57
159 160 3.710209 AGGAAGAGGAGTTGACCATTG 57.290 47.619 0.00 0.00 0.00 2.82
160 161 3.777522 CCTAGGAAGAGGAGTTGACCATT 59.222 47.826 1.05 0.00 39.15 3.16
161 162 3.379452 CCTAGGAAGAGGAGTTGACCAT 58.621 50.000 1.05 0.00 39.15 3.55
162 163 2.821437 CCTAGGAAGAGGAGTTGACCA 58.179 52.381 1.05 0.00 39.15 4.02
163 164 1.483004 GCCTAGGAAGAGGAGTTGACC 59.517 57.143 14.75 0.00 39.15 4.02
164 165 1.483004 GGCCTAGGAAGAGGAGTTGAC 59.517 57.143 14.75 0.00 39.15 3.18
165 166 1.362932 AGGCCTAGGAAGAGGAGTTGA 59.637 52.381 14.75 0.00 39.15 3.18
166 167 1.872773 AGGCCTAGGAAGAGGAGTTG 58.127 55.000 14.75 0.00 39.15 3.16
167 168 2.192263 CAAGGCCTAGGAAGAGGAGTT 58.808 52.381 14.75 0.00 39.15 3.01
168 169 1.362932 TCAAGGCCTAGGAAGAGGAGT 59.637 52.381 14.75 0.00 39.15 3.85
169 170 2.166907 TCAAGGCCTAGGAAGAGGAG 57.833 55.000 14.75 0.00 39.15 3.69
170 171 2.642171 TTCAAGGCCTAGGAAGAGGA 57.358 50.000 14.75 0.00 39.15 3.71
171 172 3.457749 AGAATTCAAGGCCTAGGAAGAGG 59.542 47.826 14.75 0.00 39.88 3.69
172 173 4.769345 AGAATTCAAGGCCTAGGAAGAG 57.231 45.455 14.75 0.00 0.00 2.85
173 174 6.415573 GTTTAGAATTCAAGGCCTAGGAAGA 58.584 40.000 14.75 0.48 0.00 2.87
174 175 5.590663 GGTTTAGAATTCAAGGCCTAGGAAG 59.409 44.000 14.75 0.00 0.00 3.46
175 176 5.014755 TGGTTTAGAATTCAAGGCCTAGGAA 59.985 40.000 14.75 18.91 0.00 3.36
176 177 4.538490 TGGTTTAGAATTCAAGGCCTAGGA 59.462 41.667 14.75 3.83 0.00 2.94
177 178 4.640647 GTGGTTTAGAATTCAAGGCCTAGG 59.359 45.833 5.16 3.67 0.00 3.02
178 179 4.640647 GGTGGTTTAGAATTCAAGGCCTAG 59.359 45.833 5.16 0.00 0.00 3.02
179 180 4.043561 TGGTGGTTTAGAATTCAAGGCCTA 59.956 41.667 5.16 0.00 0.00 3.93
180 181 3.181423 TGGTGGTTTAGAATTCAAGGCCT 60.181 43.478 0.00 0.00 0.00 5.19
181 182 3.161866 TGGTGGTTTAGAATTCAAGGCC 58.838 45.455 8.44 0.00 0.00 5.19
182 183 4.864704 TTGGTGGTTTAGAATTCAAGGC 57.135 40.909 8.44 0.00 0.00 4.35
183 184 6.873605 GGAAATTGGTGGTTTAGAATTCAAGG 59.126 38.462 8.44 0.00 0.00 3.61
184 185 7.670364 AGGAAATTGGTGGTTTAGAATTCAAG 58.330 34.615 8.44 0.00 0.00 3.02
185 186 7.610580 AGGAAATTGGTGGTTTAGAATTCAA 57.389 32.000 8.44 0.00 0.00 2.69
186 187 7.508977 AGAAGGAAATTGGTGGTTTAGAATTCA 59.491 33.333 8.44 0.00 0.00 2.57
187 188 7.814587 CAGAAGGAAATTGGTGGTTTAGAATTC 59.185 37.037 0.00 0.00 0.00 2.17
188 189 7.508977 TCAGAAGGAAATTGGTGGTTTAGAATT 59.491 33.333 0.00 0.00 0.00 2.17
189 190 7.010160 TCAGAAGGAAATTGGTGGTTTAGAAT 58.990 34.615 0.00 0.00 0.00 2.40
190 191 6.369629 TCAGAAGGAAATTGGTGGTTTAGAA 58.630 36.000 0.00 0.00 0.00 2.10
191 192 5.947663 TCAGAAGGAAATTGGTGGTTTAGA 58.052 37.500 0.00 0.00 0.00 2.10
192 193 6.265422 AGTTCAGAAGGAAATTGGTGGTTTAG 59.735 38.462 0.00 0.00 37.23 1.85
193 194 6.133356 AGTTCAGAAGGAAATTGGTGGTTTA 58.867 36.000 0.00 0.00 37.23 2.01
194 195 4.962362 AGTTCAGAAGGAAATTGGTGGTTT 59.038 37.500 0.00 0.00 37.23 3.27
195 196 4.546674 AGTTCAGAAGGAAATTGGTGGTT 58.453 39.130 0.00 0.00 37.23 3.67
196 197 4.145052 GAGTTCAGAAGGAAATTGGTGGT 58.855 43.478 0.00 0.00 37.23 4.16
197 198 3.507622 GGAGTTCAGAAGGAAATTGGTGG 59.492 47.826 0.00 0.00 37.23 4.61
198 199 4.401925 AGGAGTTCAGAAGGAAATTGGTG 58.598 43.478 0.00 0.00 37.23 4.17
199 200 4.731313 AGGAGTTCAGAAGGAAATTGGT 57.269 40.909 0.00 0.00 37.23 3.67
200 201 6.040842 TCAAAAGGAGTTCAGAAGGAAATTGG 59.959 38.462 0.00 0.00 37.23 3.16
201 202 7.042797 TCAAAAGGAGTTCAGAAGGAAATTG 57.957 36.000 0.00 0.00 37.23 2.32
202 203 7.660030 TTCAAAAGGAGTTCAGAAGGAAATT 57.340 32.000 0.00 0.00 37.23 1.82
203 204 7.846101 ATTCAAAAGGAGTTCAGAAGGAAAT 57.154 32.000 0.00 0.00 37.23 2.17
204 205 7.341769 TCAATTCAAAAGGAGTTCAGAAGGAAA 59.658 33.333 0.00 0.00 37.23 3.13
205 206 6.833416 TCAATTCAAAAGGAGTTCAGAAGGAA 59.167 34.615 0.00 0.00 0.00 3.36
206 207 6.364701 TCAATTCAAAAGGAGTTCAGAAGGA 58.635 36.000 0.00 0.00 0.00 3.36
207 208 6.639632 TCAATTCAAAAGGAGTTCAGAAGG 57.360 37.500 0.00 0.00 0.00 3.46
210 211 8.246180 GCATATTCAATTCAAAAGGAGTTCAGA 58.754 33.333 0.00 0.00 0.00 3.27
211 212 8.030692 TGCATATTCAATTCAAAAGGAGTTCAG 58.969 33.333 0.00 0.00 0.00 3.02
212 213 7.894708 TGCATATTCAATTCAAAAGGAGTTCA 58.105 30.769 0.00 0.00 0.00 3.18
213 214 8.761575 TTGCATATTCAATTCAAAAGGAGTTC 57.238 30.769 0.00 0.00 0.00 3.01
214 215 9.558396 TTTTGCATATTCAATTCAAAAGGAGTT 57.442 25.926 0.00 0.00 33.39 3.01
215 216 9.558396 TTTTTGCATATTCAATTCAAAAGGAGT 57.442 25.926 0.00 0.00 37.74 3.85
238 239 3.186409 CGATGTCTCCGATGTGTGTTTTT 59.814 43.478 0.00 0.00 0.00 1.94
239 240 2.736721 CGATGTCTCCGATGTGTGTTTT 59.263 45.455 0.00 0.00 0.00 2.43
240 241 2.337583 CGATGTCTCCGATGTGTGTTT 58.662 47.619 0.00 0.00 0.00 2.83
241 242 1.996292 CGATGTCTCCGATGTGTGTT 58.004 50.000 0.00 0.00 0.00 3.32
242 243 0.458543 GCGATGTCTCCGATGTGTGT 60.459 55.000 0.00 0.00 0.00 3.72
243 244 1.148157 GGCGATGTCTCCGATGTGTG 61.148 60.000 0.00 0.00 0.00 3.82
244 245 1.141881 GGCGATGTCTCCGATGTGT 59.858 57.895 0.00 0.00 0.00 3.72
245 246 1.592669 GGGCGATGTCTCCGATGTG 60.593 63.158 0.00 0.00 0.00 3.21
246 247 2.058001 TGGGCGATGTCTCCGATGT 61.058 57.895 0.00 0.00 0.00 3.06
247 248 1.592669 GTGGGCGATGTCTCCGATG 60.593 63.158 0.00 0.00 0.00 3.84
248 249 0.467474 TAGTGGGCGATGTCTCCGAT 60.467 55.000 0.00 0.00 0.00 4.18
249 250 1.077285 TAGTGGGCGATGTCTCCGA 60.077 57.895 0.00 0.00 0.00 4.55
250 251 1.360551 CTAGTGGGCGATGTCTCCG 59.639 63.158 0.00 0.00 0.00 4.63
251 252 1.068250 GCTAGTGGGCGATGTCTCC 59.932 63.158 0.00 0.00 0.00 3.71
252 253 4.740235 GCTAGTGGGCGATGTCTC 57.260 61.111 0.00 0.00 0.00 3.36
261 262 1.078848 AGAAAGCAGCGCTAGTGGG 60.079 57.895 10.99 0.00 38.25 4.61
262 263 1.364626 CCAGAAAGCAGCGCTAGTGG 61.365 60.000 10.99 7.04 38.25 4.00
263 264 1.364626 CCCAGAAAGCAGCGCTAGTG 61.365 60.000 10.99 0.00 38.25 2.74
264 265 1.078848 CCCAGAAAGCAGCGCTAGT 60.079 57.895 10.99 0.00 38.25 2.57
265 266 2.467826 GCCCAGAAAGCAGCGCTAG 61.468 63.158 10.99 5.98 38.25 3.42
266 267 2.436646 GCCCAGAAAGCAGCGCTA 60.437 61.111 10.99 0.00 38.25 4.26
269 270 3.437795 CTGGCCCAGAAAGCAGCG 61.438 66.667 4.15 0.00 32.44 5.18
270 271 3.756727 GCTGGCCCAGAAAGCAGC 61.757 66.667 16.85 0.00 36.91 5.25
271 272 3.066814 GGCTGGCCCAGAAAGCAG 61.067 66.667 16.85 0.00 38.73 4.24
281 282 1.077429 CTTCCTAAGTGGGCTGGCC 60.077 63.158 14.23 14.23 36.20 5.36
282 283 1.077429 CCTTCCTAAGTGGGCTGGC 60.077 63.158 0.00 0.00 36.20 4.85
283 284 1.077429 GCCTTCCTAAGTGGGCTGG 60.077 63.158 0.00 0.00 41.20 4.85
284 285 0.038166 TTGCCTTCCTAAGTGGGCTG 59.962 55.000 0.00 0.00 44.36 4.85
285 286 0.038310 GTTGCCTTCCTAAGTGGGCT 59.962 55.000 0.00 0.00 44.36 5.19
286 287 1.305930 CGTTGCCTTCCTAAGTGGGC 61.306 60.000 0.00 0.00 44.31 5.36
287 288 0.676782 CCGTTGCCTTCCTAAGTGGG 60.677 60.000 0.00 0.00 36.20 4.61
288 289 0.036306 ACCGTTGCCTTCCTAAGTGG 59.964 55.000 0.00 0.00 37.10 4.00
289 290 2.344025 GTACCGTTGCCTTCCTAAGTG 58.656 52.381 0.00 0.00 0.00 3.16
290 291 1.277273 GGTACCGTTGCCTTCCTAAGT 59.723 52.381 0.00 0.00 0.00 2.24
291 292 1.276989 TGGTACCGTTGCCTTCCTAAG 59.723 52.381 7.57 0.00 0.00 2.18
292 293 1.350071 TGGTACCGTTGCCTTCCTAA 58.650 50.000 7.57 0.00 0.00 2.69
293 294 1.575419 ATGGTACCGTTGCCTTCCTA 58.425 50.000 7.57 0.00 0.00 2.94
294 295 0.696501 AATGGTACCGTTGCCTTCCT 59.303 50.000 18.79 0.00 0.00 3.36
295 296 1.541379 AAATGGTACCGTTGCCTTCC 58.459 50.000 20.13 0.00 0.00 3.46
296 297 4.216902 AGTTAAAATGGTACCGTTGCCTTC 59.783 41.667 20.13 9.89 0.00 3.46
297 298 4.022676 CAGTTAAAATGGTACCGTTGCCTT 60.023 41.667 20.13 12.91 0.00 4.35
298 299 3.504520 CAGTTAAAATGGTACCGTTGCCT 59.495 43.478 20.13 10.34 0.00 4.75
299 300 3.502979 TCAGTTAAAATGGTACCGTTGCC 59.497 43.478 20.13 8.36 0.00 4.52
300 301 4.752661 TCAGTTAAAATGGTACCGTTGC 57.247 40.909 20.13 10.65 0.00 4.17
301 302 6.737254 AGATCAGTTAAAATGGTACCGTTG 57.263 37.500 20.13 7.47 0.00 4.10
302 303 6.938030 TGAAGATCAGTTAAAATGGTACCGTT 59.062 34.615 13.90 13.90 0.00 4.44
303 304 6.469410 TGAAGATCAGTTAAAATGGTACCGT 58.531 36.000 7.57 3.49 0.00 4.83
304 305 6.816640 TCTGAAGATCAGTTAAAATGGTACCG 59.183 38.462 7.57 0.00 44.58 4.02
305 306 8.561738 TTCTGAAGATCAGTTAAAATGGTACC 57.438 34.615 4.43 4.43 44.58 3.34
306 307 8.669243 CCTTCTGAAGATCAGTTAAAATGGTAC 58.331 37.037 18.68 0.00 44.58 3.34
307 308 8.383175 ACCTTCTGAAGATCAGTTAAAATGGTA 58.617 33.333 18.68 0.00 44.58 3.25
308 309 7.234355 ACCTTCTGAAGATCAGTTAAAATGGT 58.766 34.615 18.68 0.99 44.58 3.55
309 310 7.693969 ACCTTCTGAAGATCAGTTAAAATGG 57.306 36.000 18.68 0.37 44.58 3.16
310 311 9.007901 AGAACCTTCTGAAGATCAGTTAAAATG 57.992 33.333 18.68 0.05 44.58 2.32
312 313 9.712305 CTAGAACCTTCTGAAGATCAGTTAAAA 57.288 33.333 18.68 3.33 44.58 1.52
313 314 9.090103 TCTAGAACCTTCTGAAGATCAGTTAAA 57.910 33.333 18.68 5.33 44.58 1.52
314 315 8.651589 TCTAGAACCTTCTGAAGATCAGTTAA 57.348 34.615 18.68 5.62 44.58 2.01
315 316 8.524487 GTTCTAGAACCTTCTGAAGATCAGTTA 58.476 37.037 22.74 5.18 39.11 2.24
316 317 7.382898 GTTCTAGAACCTTCTGAAGATCAGTT 58.617 38.462 22.74 13.10 39.11 3.16
317 318 6.930731 GTTCTAGAACCTTCTGAAGATCAGT 58.069 40.000 22.74 5.20 39.11 3.41
332 333 5.741962 AACCAGGTAGAAGGTTCTAGAAC 57.258 43.478 24.73 24.73 44.51 3.01
333 334 6.517864 CGAAAACCAGGTAGAAGGTTCTAGAA 60.518 42.308 0.00 0.00 46.92 2.10
334 335 5.047519 CGAAAACCAGGTAGAAGGTTCTAGA 60.048 44.000 0.00 0.00 46.92 2.43
335 336 5.047519 TCGAAAACCAGGTAGAAGGTTCTAG 60.048 44.000 0.00 0.00 46.92 2.43
336 337 4.834496 TCGAAAACCAGGTAGAAGGTTCTA 59.166 41.667 0.00 0.00 46.92 2.10
337 338 3.644738 TCGAAAACCAGGTAGAAGGTTCT 59.355 43.478 0.00 0.00 46.92 3.01
338 339 3.999046 TCGAAAACCAGGTAGAAGGTTC 58.001 45.455 0.00 0.00 46.92 3.62
340 341 3.644738 TCTTCGAAAACCAGGTAGAAGGT 59.355 43.478 18.95 0.00 40.61 3.50
341 342 4.267349 TCTTCGAAAACCAGGTAGAAGG 57.733 45.455 18.95 7.84 36.64 3.46
342 343 6.166982 AGAATCTTCGAAAACCAGGTAGAAG 58.833 40.000 15.57 15.57 37.14 2.85
343 344 6.110411 AGAATCTTCGAAAACCAGGTAGAA 57.890 37.500 0.00 0.00 0.00 2.10
344 345 5.740290 AGAATCTTCGAAAACCAGGTAGA 57.260 39.130 0.00 0.00 0.00 2.59
345 346 6.864342 TCTAGAATCTTCGAAAACCAGGTAG 58.136 40.000 0.00 0.00 0.00 3.18
346 347 6.845758 TCTAGAATCTTCGAAAACCAGGTA 57.154 37.500 0.00 0.00 0.00 3.08
347 348 5.740290 TCTAGAATCTTCGAAAACCAGGT 57.260 39.130 0.00 0.00 0.00 4.00
348 349 5.582665 CCTTCTAGAATCTTCGAAAACCAGG 59.417 44.000 5.44 0.00 0.00 4.45
349 350 6.166982 ACCTTCTAGAATCTTCGAAAACCAG 58.833 40.000 5.44 0.00 0.00 4.00
350 351 6.014499 AGACCTTCTAGAATCTTCGAAAACCA 60.014 38.462 5.44 0.00 0.00 3.67
351 352 6.399743 AGACCTTCTAGAATCTTCGAAAACC 58.600 40.000 5.44 0.00 0.00 3.27
352 353 7.385478 ACAAGACCTTCTAGAATCTTCGAAAAC 59.615 37.037 15.43 0.00 28.85 2.43
353 354 7.442656 ACAAGACCTTCTAGAATCTTCGAAAA 58.557 34.615 15.43 0.00 28.85 2.29
354 355 6.994221 ACAAGACCTTCTAGAATCTTCGAAA 58.006 36.000 15.43 0.00 28.85 3.46
355 356 6.591750 ACAAGACCTTCTAGAATCTTCGAA 57.408 37.500 15.43 0.00 28.85 3.71
356 357 6.208797 TGAACAAGACCTTCTAGAATCTTCGA 59.791 38.462 15.43 1.89 28.85 3.71
357 358 6.309251 GTGAACAAGACCTTCTAGAATCTTCG 59.691 42.308 15.43 13.52 28.85 3.79
358 359 7.330700 CAGTGAACAAGACCTTCTAGAATCTTC 59.669 40.741 15.43 8.56 28.85 2.87
359 360 7.158021 CAGTGAACAAGACCTTCTAGAATCTT 58.842 38.462 13.35 13.35 31.53 2.40
360 361 6.268847 ACAGTGAACAAGACCTTCTAGAATCT 59.731 38.462 5.44 4.16 0.00 2.40
361 362 6.367422 CACAGTGAACAAGACCTTCTAGAATC 59.633 42.308 5.44 1.62 0.00 2.52
362 363 6.183361 ACACAGTGAACAAGACCTTCTAGAAT 60.183 38.462 7.81 0.00 0.00 2.40
363 364 5.128827 ACACAGTGAACAAGACCTTCTAGAA 59.871 40.000 7.81 4.81 0.00 2.10
364 365 4.649674 ACACAGTGAACAAGACCTTCTAGA 59.350 41.667 7.81 0.00 0.00 2.43
365 366 4.950050 ACACAGTGAACAAGACCTTCTAG 58.050 43.478 7.81 0.00 0.00 2.43
366 367 5.353394 AACACAGTGAACAAGACCTTCTA 57.647 39.130 7.81 0.00 0.00 2.10
367 368 3.914426 ACACAGTGAACAAGACCTTCT 57.086 42.857 7.81 0.00 0.00 2.85
368 369 4.965119 AAACACAGTGAACAAGACCTTC 57.035 40.909 7.81 0.00 0.00 3.46
369 370 5.010617 ACAAAAACACAGTGAACAAGACCTT 59.989 36.000 7.81 0.00 0.00 3.50
370 371 4.522789 ACAAAAACACAGTGAACAAGACCT 59.477 37.500 7.81 0.00 0.00 3.85
371 372 4.805219 ACAAAAACACAGTGAACAAGACC 58.195 39.130 7.81 0.00 0.00 3.85
372 373 6.763303 AAACAAAAACACAGTGAACAAGAC 57.237 33.333 7.81 0.00 0.00 3.01
373 374 7.206687 AGAAAACAAAAACACAGTGAACAAGA 58.793 30.769 7.81 0.00 0.00 3.02
374 375 7.382218 AGAGAAAACAAAAACACAGTGAACAAG 59.618 33.333 7.81 0.00 0.00 3.16
375 376 7.206687 AGAGAAAACAAAAACACAGTGAACAA 58.793 30.769 7.81 0.00 0.00 2.83
376 377 6.744112 AGAGAAAACAAAAACACAGTGAACA 58.256 32.000 7.81 0.00 0.00 3.18
377 378 7.637709 AAGAGAAAACAAAAACACAGTGAAC 57.362 32.000 7.81 0.00 0.00 3.18
378 379 7.708752 ACAAAGAGAAAACAAAAACACAGTGAA 59.291 29.630 7.81 0.00 0.00 3.18
379 380 7.206687 ACAAAGAGAAAACAAAAACACAGTGA 58.793 30.769 7.81 0.00 0.00 3.41
380 381 7.406799 ACAAAGAGAAAACAAAAACACAGTG 57.593 32.000 0.00 0.00 0.00 3.66
381 382 8.432110 AAACAAAGAGAAAACAAAAACACAGT 57.568 26.923 0.00 0.00 0.00 3.55
382 383 9.368921 GAAAACAAAGAGAAAACAAAAACACAG 57.631 29.630 0.00 0.00 0.00 3.66
383 384 9.103861 AGAAAACAAAGAGAAAACAAAAACACA 57.896 25.926 0.00 0.00 0.00 3.72
384 385 9.929722 AAGAAAACAAAGAGAAAACAAAAACAC 57.070 25.926 0.00 0.00 0.00 3.32
441 442 9.896645 ACATGAGTTTGACATATCTTCACTAAT 57.103 29.630 0.00 0.00 0.00 1.73
443 444 9.803315 GTACATGAGTTTGACATATCTTCACTA 57.197 33.333 0.00 0.00 0.00 2.74
444 445 8.314021 TGTACATGAGTTTGACATATCTTCACT 58.686 33.333 0.00 0.00 0.00 3.41
445 446 8.479313 TGTACATGAGTTTGACATATCTTCAC 57.521 34.615 0.00 0.00 0.00 3.18
446 447 9.671279 AATGTACATGAGTTTGACATATCTTCA 57.329 29.630 9.63 0.00 30.69 3.02
452 453 9.072375 TGGAAAAATGTACATGAGTTTGACATA 57.928 29.630 9.63 0.00 30.69 2.29
453 454 7.950512 TGGAAAAATGTACATGAGTTTGACAT 58.049 30.769 9.63 0.00 32.18 3.06
454 455 7.340122 TGGAAAAATGTACATGAGTTTGACA 57.660 32.000 9.63 6.69 0.00 3.58
455 456 8.816640 AATGGAAAAATGTACATGAGTTTGAC 57.183 30.769 9.63 4.38 0.00 3.18
456 457 9.829507 AAAATGGAAAAATGTACATGAGTTTGA 57.170 25.926 9.63 1.08 0.00 2.69
637 638 8.469200 TGAGAAATGTCTGTGAGTTCAATTTTT 58.531 29.630 0.00 0.00 32.80 1.94
638 639 7.999679 TGAGAAATGTCTGTGAGTTCAATTTT 58.000 30.769 0.00 0.00 32.80 1.82
639 640 7.572523 TGAGAAATGTCTGTGAGTTCAATTT 57.427 32.000 0.00 0.00 32.80 1.82
640 641 7.572523 TTGAGAAATGTCTGTGAGTTCAATT 57.427 32.000 0.00 0.00 32.80 2.32
641 642 7.756395 ATTGAGAAATGTCTGTGAGTTCAAT 57.244 32.000 0.00 0.00 32.80 2.57
642 643 7.572523 AATTGAGAAATGTCTGTGAGTTCAA 57.427 32.000 0.00 0.00 32.80 2.69
643 644 7.933577 ACTAATTGAGAAATGTCTGTGAGTTCA 59.066 33.333 0.00 0.00 32.80 3.18
644 645 8.226448 CACTAATTGAGAAATGTCTGTGAGTTC 58.774 37.037 0.00 0.00 32.80 3.01
645 646 7.173907 CCACTAATTGAGAAATGTCTGTGAGTT 59.826 37.037 0.00 0.00 32.80 3.01
646 647 6.652481 CCACTAATTGAGAAATGTCTGTGAGT 59.348 38.462 0.00 0.00 32.80 3.41
647 648 6.875726 TCCACTAATTGAGAAATGTCTGTGAG 59.124 38.462 0.00 0.00 32.80 3.51
648 649 6.650807 GTCCACTAATTGAGAAATGTCTGTGA 59.349 38.462 0.00 0.00 32.80 3.58
649 650 6.427853 TGTCCACTAATTGAGAAATGTCTGTG 59.572 38.462 0.00 0.00 32.80 3.66
650 651 6.533730 TGTCCACTAATTGAGAAATGTCTGT 58.466 36.000 0.00 0.00 32.80 3.41
651 652 7.621428 ATGTCCACTAATTGAGAAATGTCTG 57.379 36.000 0.00 0.00 32.80 3.51
652 653 8.641498 AAATGTCCACTAATTGAGAAATGTCT 57.359 30.769 0.00 0.00 36.55 3.41
653 654 9.696917 AAAAATGTCCACTAATTGAGAAATGTC 57.303 29.630 0.00 0.00 0.00 3.06
693 694 9.110502 ACGGACTAAAATTTGCCAATTTAAAAA 57.889 25.926 8.76 0.00 41.02 1.94
694 695 8.552034 CACGGACTAAAATTTGCCAATTTAAAA 58.448 29.630 8.76 0.00 41.02 1.52
695 696 7.171678 CCACGGACTAAAATTTGCCAATTTAAA 59.828 33.333 8.76 0.00 41.02 1.52
696 697 6.647067 CCACGGACTAAAATTTGCCAATTTAA 59.353 34.615 8.76 0.00 41.02 1.52
697 698 6.015350 TCCACGGACTAAAATTTGCCAATTTA 60.015 34.615 8.76 0.00 41.02 1.40
698 699 4.994217 CCACGGACTAAAATTTGCCAATTT 59.006 37.500 2.76 2.76 43.29 1.82
699 700 4.282195 TCCACGGACTAAAATTTGCCAATT 59.718 37.500 0.00 0.00 33.72 2.32
700 701 3.829601 TCCACGGACTAAAATTTGCCAAT 59.170 39.130 0.00 0.00 0.00 3.16
701 702 3.223435 TCCACGGACTAAAATTTGCCAA 58.777 40.909 0.00 0.00 0.00 4.52
702 703 2.865079 TCCACGGACTAAAATTTGCCA 58.135 42.857 0.00 0.00 0.00 4.92
703 704 3.926821 TTCCACGGACTAAAATTTGCC 57.073 42.857 0.00 0.00 0.00 4.52
704 705 8.474006 AAATATTTCCACGGACTAAAATTTGC 57.526 30.769 0.00 0.00 0.00 3.68
705 706 9.632807 TGAAATATTTCCACGGACTAAAATTTG 57.367 29.630 22.42 0.00 36.36 2.32
709 710 9.849166 GAATTGAAATATTTCCACGGACTAAAA 57.151 29.630 22.42 8.70 36.36 1.52
710 711 9.015367 TGAATTGAAATATTTCCACGGACTAAA 57.985 29.630 22.42 9.32 36.36 1.85
711 712 8.568676 TGAATTGAAATATTTCCACGGACTAA 57.431 30.769 22.42 9.94 36.36 2.24
712 713 8.620416 CATGAATTGAAATATTTCCACGGACTA 58.380 33.333 22.42 1.69 36.36 2.59
713 714 7.339212 TCATGAATTGAAATATTTCCACGGACT 59.661 33.333 22.42 3.47 36.36 3.85
714 715 7.479980 TCATGAATTGAAATATTTCCACGGAC 58.520 34.615 22.42 11.22 36.36 4.79
715 716 7.637631 TCATGAATTGAAATATTTCCACGGA 57.362 32.000 22.42 12.44 36.36 4.69
716 717 7.758980 TGTTCATGAATTGAAATATTTCCACGG 59.241 33.333 22.42 10.78 45.71 4.94
717 718 8.686397 TGTTCATGAATTGAAATATTTCCACG 57.314 30.769 22.42 8.40 45.71 4.94
744 745 9.102757 TGAAAACATGATCGGAAATTTCAAAAA 57.897 25.926 19.49 2.46 33.74 1.94
745 746 8.654230 TGAAAACATGATCGGAAATTTCAAAA 57.346 26.923 19.49 4.86 33.74 2.44
746 747 8.654230 TTGAAAACATGATCGGAAATTTCAAA 57.346 26.923 19.49 7.30 40.36 2.69
747 748 8.830201 ATTGAAAACATGATCGGAAATTTCAA 57.170 26.923 19.49 19.38 44.46 2.69
748 749 8.830201 AATTGAAAACATGATCGGAAATTTCA 57.170 26.923 19.49 0.48 34.55 2.69
749 750 9.532697 CAAATTGAAAACATGATCGGAAATTTC 57.467 29.630 9.83 9.83 0.00 2.17
750 751 8.016801 GCAAATTGAAAACATGATCGGAAATTT 58.983 29.630 0.00 0.00 0.00 1.82
751 752 7.361116 GGCAAATTGAAAACATGATCGGAAATT 60.361 33.333 0.00 0.00 0.00 1.82
752 753 6.092533 GGCAAATTGAAAACATGATCGGAAAT 59.907 34.615 0.00 0.00 0.00 2.17
753 754 5.407995 GGCAAATTGAAAACATGATCGGAAA 59.592 36.000 0.00 0.00 0.00 3.13
754 755 4.928615 GGCAAATTGAAAACATGATCGGAA 59.071 37.500 0.00 0.00 0.00 4.30
755 756 4.021632 TGGCAAATTGAAAACATGATCGGA 60.022 37.500 0.00 0.00 0.00 4.55
756 757 4.244066 TGGCAAATTGAAAACATGATCGG 58.756 39.130 0.00 0.00 0.00 4.18
757 758 5.177142 TGTTGGCAAATTGAAAACATGATCG 59.823 36.000 0.00 0.00 0.00 3.69
758 759 6.542574 TGTTGGCAAATTGAAAACATGATC 57.457 33.333 0.00 0.00 0.00 2.92
759 760 7.513371 AATGTTGGCAAATTGAAAACATGAT 57.487 28.000 19.97 8.85 39.80 2.45
760 761 6.939132 AATGTTGGCAAATTGAAAACATGA 57.061 29.167 19.97 1.75 39.80 3.07
761 762 7.988904 AAAATGTTGGCAAATTGAAAACATG 57.011 28.000 19.97 0.00 39.80 3.21
931 954 5.173854 GCGTTCCTTTTTCTGTCATTCTTTG 59.826 40.000 0.00 0.00 0.00 2.77
1025 1069 3.325425 TGAACGAAATGGAGACCTAACCA 59.675 43.478 0.00 0.00 40.57 3.67
1043 1087 3.537297 GTCGCGCTCGAGCTGAAC 61.537 66.667 32.88 22.73 46.46 3.18
1044 1088 3.953444 CTGTCGCGCTCGAGCTGAA 62.953 63.158 32.88 16.10 46.46 3.02
1045 1089 4.467062 CTGTCGCGCTCGAGCTGA 62.467 66.667 32.88 26.50 46.46 4.26
1195 1253 2.182842 CAGGTGAAGGCGGCATAGC 61.183 63.158 13.08 6.48 0.00 2.97
1322 1382 4.785453 GAGGGGAAGGCTGGCACG 62.785 72.222 3.38 0.00 0.00 5.34
1325 1388 3.803162 GAGGAGGGGAAGGCTGGC 61.803 72.222 0.00 0.00 0.00 4.85
1328 1391 2.685380 CGTGAGGAGGGGAAGGCT 60.685 66.667 0.00 0.00 0.00 4.58
1384 1456 4.865761 CGGAATCGGAAGCGGCGA 62.866 66.667 12.98 0.00 0.00 5.54
1685 1772 4.203076 GGCGTCGCAGTATCCGGT 62.203 66.667 20.50 0.00 0.00 5.28
1729 1816 2.032528 CATCCACCACCGTGCTGT 59.967 61.111 0.00 0.00 38.79 4.40
1931 2402 2.202295 TCCAAAGAAAAAGCGTGCAC 57.798 45.000 6.82 6.82 0.00 4.57
1987 3185 2.380410 GGGAACGTACTGTGCAGCG 61.380 63.158 0.00 0.00 0.00 5.18
2007 3205 3.062763 CCTCCATAAATCTAGCGTGCAG 58.937 50.000 0.00 0.00 0.00 4.41
2159 3359 1.691976 TCCGCTGTTTCCAGAGAGAAA 59.308 47.619 0.00 0.00 40.57 2.52
2247 3447 2.431419 TCACCGTGTTGTCTACCAAAGA 59.569 45.455 0.00 0.00 34.07 2.52
2412 3630 8.079211 TCCTCTACTATGAGTTATGCAAAAGT 57.921 34.615 0.00 0.00 32.50 2.66
2471 3710 2.093106 AGTAGTTGAGGTCGCCTACTG 58.907 52.381 10.00 0.00 38.85 2.74
2477 3772 3.293311 TGTACAAGTAGTTGAGGTCGC 57.707 47.619 17.23 1.57 37.10 5.19
2595 3948 5.276461 ACTGCGACACTTATTATGGATCA 57.724 39.130 0.00 0.00 0.00 2.92
2612 3965 0.521735 GGGGCTAGTTCAAAACTGCG 59.478 55.000 2.65 0.00 42.84 5.18
2615 3968 3.595190 AACTGGGGCTAGTTCAAAACT 57.405 42.857 2.58 0.00 45.40 2.66
2622 3975 3.595190 AGTTTTGAACTGGGGCTAGTT 57.405 42.857 7.27 7.27 43.24 2.24
2632 3985 7.602265 ACAAAATAAGTGTTGCAGTTTTGAACT 59.398 29.630 13.35 0.00 44.06 3.01
2633 3986 7.738345 ACAAAATAAGTGTTGCAGTTTTGAAC 58.262 30.769 13.35 0.74 38.26 3.18
2635 3988 9.593134 AATACAAAATAAGTGTTGCAGTTTTGA 57.407 25.926 13.35 1.18 38.26 2.69
2636 3989 9.635632 CAATACAAAATAAGTGTTGCAGTTTTG 57.364 29.630 0.00 0.00 40.48 2.44
2637 3990 8.825745 CCAATACAAAATAAGTGTTGCAGTTTT 58.174 29.630 0.00 0.00 36.95 2.43
2645 3998 8.650143 ACTCCATCCAATACAAAATAAGTGTT 57.350 30.769 0.00 0.00 0.00 3.32
2681 4034 4.822026 ACACCACTGACAAATCTAGCTAC 58.178 43.478 0.00 0.00 0.00 3.58
2883 5213 2.936032 GCAGGGTCAGGGGAAGGT 60.936 66.667 0.00 0.00 0.00 3.50
2886 5216 2.528127 TTCGCAGGGTCAGGGGAA 60.528 61.111 0.00 0.00 34.16 3.97
2887 5217 3.003173 CTTCGCAGGGTCAGGGGA 61.003 66.667 0.00 0.00 0.00 4.81
3020 5930 9.119329 GACAAATCTAGCTATTCATACACTACG 57.881 37.037 0.00 0.00 0.00 3.51
3166 6295 9.754382 GGCATGAAATTATGAAACACATATTCT 57.246 29.630 0.00 0.00 40.56 2.40
3258 6403 7.233757 GGGGATAATCATGTGTACTACTCTCTT 59.766 40.741 0.00 0.00 0.00 2.85
3262 6407 6.665992 TGGGGATAATCATGTGTACTACTC 57.334 41.667 0.00 0.00 0.00 2.59
3288 6434 5.825593 ACATGGAAGAGGTTAGAAAGTGA 57.174 39.130 0.00 0.00 0.00 3.41
3293 6439 5.001232 CCGAAAACATGGAAGAGGTTAGAA 58.999 41.667 0.00 0.00 0.00 2.10
3429 6677 7.687941 TTTGGAAACAGATAGGAAGATGTTC 57.312 36.000 0.00 0.00 44.54 3.18
3517 6767 9.626045 AAAGAAATGAACGGTTAAGATTTGATC 57.374 29.630 8.78 0.00 0.00 2.92
3677 6940 8.827177 ATGTGAAGATTTTACAGAGTTAACGA 57.173 30.769 0.00 0.00 0.00 3.85
3837 7116 7.335422 ACCATCTAGAACATTTTAACTCTGCTG 59.665 37.037 0.00 0.00 0.00 4.41
3840 7119 9.877178 ACTACCATCTAGAACATTTTAACTCTG 57.123 33.333 0.00 0.00 0.00 3.35
3851 7130 6.192044 TGATACACCACTACCATCTAGAACA 58.808 40.000 0.00 0.00 0.00 3.18
3917 7211 7.002250 AGGGAGTATGTGATACAGATCATTG 57.998 40.000 0.00 0.00 43.95 2.82
3943 7257 4.406069 TCTACGACAAGTAATTCCGAACG 58.594 43.478 0.00 0.00 34.45 3.95
3946 7260 5.808540 CCATTTCTACGACAAGTAATTCCGA 59.191 40.000 0.00 0.00 34.45 4.55
4022 7346 1.265732 CGTCACGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 40.95 5.87
4038 7362 5.124457 GTGTAGACAAATACTACCTCCGTCA 59.876 44.000 0.00 0.00 39.30 4.35
4130 7454 1.403679 CACTTCCAACGCTGTTTCCAA 59.596 47.619 0.00 0.00 0.00 3.53
4354 7678 1.066286 GTCTGCACCTGCTCTCAAGAT 60.066 52.381 0.00 0.00 42.66 2.40
4646 7976 3.138468 ACCCTTGACTAAACTCCTTGCTT 59.862 43.478 0.00 0.00 0.00 3.91
4768 8190 2.436292 CCTGAGCTCTGTGCCTGC 60.436 66.667 16.19 0.00 44.23 4.85
5033 8530 7.318141 AGGTTGCACATCATTGATTAGAAAAG 58.682 34.615 0.00 0.00 0.00 2.27
5095 8594 7.981102 ACTCTCGCACATATATACACTTCTA 57.019 36.000 0.00 0.00 0.00 2.10
5197 8857 3.769739 TCACACTACAAGCATCTTGGT 57.230 42.857 10.80 0.00 0.00 3.67
5338 9007 1.168714 CTCCCTCGAAAAAGGCAAGG 58.831 55.000 0.00 0.00 34.88 3.61
5339 9008 0.523519 GCTCCCTCGAAAAAGGCAAG 59.476 55.000 0.00 0.00 34.88 4.01
5340 9009 1.234615 CGCTCCCTCGAAAAAGGCAA 61.235 55.000 0.00 0.00 34.88 4.52
5344 9013 0.670546 TCTGCGCTCCCTCGAAAAAG 60.671 55.000 9.73 0.00 0.00 2.27
5345 9014 0.949105 GTCTGCGCTCCCTCGAAAAA 60.949 55.000 9.73 0.00 0.00 1.94
5346 9015 1.374252 GTCTGCGCTCCCTCGAAAA 60.374 57.895 9.73 0.00 0.00 2.29
5348 9017 4.116328 CGTCTGCGCTCCCTCGAA 62.116 66.667 9.73 0.00 0.00 3.71
5398 9294 3.243704 GCTCCCAATGTTAACTGCAAACA 60.244 43.478 7.22 4.98 40.85 2.83
5459 9355 4.567747 GCCTCCCAATGTCTCCTTTCTAAA 60.568 45.833 0.00 0.00 0.00 1.85
5460 9356 3.054361 GCCTCCCAATGTCTCCTTTCTAA 60.054 47.826 0.00 0.00 0.00 2.10
5461 9357 2.505819 GCCTCCCAATGTCTCCTTTCTA 59.494 50.000 0.00 0.00 0.00 2.10
5475 9371 1.973515 CTATCAGCATAGTGCCTCCCA 59.026 52.381 0.00 0.00 46.52 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.