Multiple sequence alignment - TraesCS2A01G471300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G471300 chr2A 100.000 3421 0 0 1 3421 713530208 713533628 0.000000e+00 6318.0
1 TraesCS2A01G471300 chr2A 89.423 104 10 1 2466 2568 713644451 713644554 2.770000e-26 130.0
2 TraesCS2A01G471300 chr2A 90.625 64 5 1 2664 2726 389538162 389538099 2.190000e-12 84.2
3 TraesCS2A01G471300 chr2D 95.069 1602 57 7 816 2405 575238701 575240292 0.000000e+00 2501.0
4 TraesCS2A01G471300 chr2D 92.377 1771 91 16 658 2405 634407108 634408857 0.000000e+00 2483.0
5 TraesCS2A01G471300 chr2D 92.075 858 51 6 2569 3421 634408851 634409696 0.000000e+00 1192.0
6 TraesCS2A01G471300 chr2D 91.259 858 64 7 2569 3421 575240286 575241137 0.000000e+00 1158.0
7 TraesCS2A01G471300 chr2D 87.886 421 43 7 2 419 469775491 469775906 3.970000e-134 488.0
8 TraesCS2A01G471300 chr2D 85.811 444 35 10 1 422 539571870 539571433 2.420000e-121 446.0
9 TraesCS2A01G471300 chr2D 96.491 171 4 2 655 824 575230840 575231009 7.230000e-72 281.0
10 TraesCS2A01G471300 chr2D 92.517 147 10 1 416 561 573962708 573962562 3.460000e-50 209.0
11 TraesCS2A01G471300 chr2D 89.865 148 11 3 416 561 573773580 573773725 1.620000e-43 187.0
12 TraesCS2A01G471300 chr2D 87.255 102 11 2 2467 2568 136462908 136462809 7.760000e-22 115.0
13 TraesCS2A01G471300 chr2D 87.129 101 12 1 2466 2566 516332521 516332620 2.790000e-21 113.0
14 TraesCS2A01G471300 chr2B 88.789 1775 145 31 655 2405 691417824 691416080 0.000000e+00 2126.0
15 TraesCS2A01G471300 chr2B 92.703 1439 76 9 946 2363 691270532 691271962 0.000000e+00 2049.0
16 TraesCS2A01G471300 chr2B 88.974 780 60 12 2569 3343 691283003 691283761 0.000000e+00 941.0
17 TraesCS2A01G471300 chr2B 94.218 294 9 2 659 951 691268745 691269031 3.130000e-120 442.0
18 TraesCS2A01G471300 chr2B 84.404 436 40 12 4 419 228731468 228731041 1.480000e-108 403.0
19 TraesCS2A01G471300 chr2B 97.561 82 2 0 3340 3421 691307428 691307509 1.280000e-29 141.0
20 TraesCS2A01G471300 chr2B 95.745 47 2 0 2359 2405 691282963 691283009 3.660000e-10 76.8
21 TraesCS2A01G471300 chr4B 75.931 1396 276 43 1015 2386 643893565 643894924 0.000000e+00 662.0
22 TraesCS2A01G471300 chr4B 88.557 402 37 8 26 422 535084229 535083832 2.390000e-131 479.0
23 TraesCS2A01G471300 chr4B 94.030 201 10 2 416 614 33648282 33648082 1.540000e-78 303.0
24 TraesCS2A01G471300 chr4B 94.000 200 11 1 416 614 110317566 110317765 5.550000e-78 302.0
25 TraesCS2A01G471300 chr4B 93.532 201 11 2 416 614 70563205 70563405 7.180000e-77 298.0
26 TraesCS2A01G471300 chr4B 87.255 102 13 0 2467 2568 497112342 497112443 2.160000e-22 117.0
27 TraesCS2A01G471300 chr4B 85.294 102 14 1 2466 2567 11572444 11572344 1.680000e-18 104.0
28 TraesCS2A01G471300 chr3D 88.610 439 24 8 4 419 66146216 66145781 8.470000e-141 510.0
29 TraesCS2A01G471300 chr3D 91.358 243 19 2 416 656 546406663 546406421 7.080000e-87 331.0
30 TraesCS2A01G471300 chr3D 82.018 228 34 7 127 350 609995245 609995021 1.620000e-43 187.0
31 TraesCS2A01G471300 chrUn 88.471 425 39 7 1 419 263240592 263241012 3.940000e-139 505.0
32 TraesCS2A01G471300 chrUn 88.276 435 29 7 4 419 369789485 369789916 5.100000e-138 501.0
33 TraesCS2A01G471300 chrUn 88.276 435 29 7 4 419 462348280 462348711 5.100000e-138 501.0
34 TraesCS2A01G471300 chrUn 85.294 102 15 0 2467 2568 287774802 287774701 4.670000e-19 106.0
35 TraesCS2A01G471300 chrUn 85.294 102 15 0 2467 2568 297963927 297963826 4.670000e-19 106.0
36 TraesCS2A01G471300 chr5B 88.318 428 40 7 1 422 635113327 635112904 3.940000e-139 505.0
37 TraesCS2A01G471300 chr5B 86.928 153 17 3 416 566 673463150 673463301 5.870000e-38 169.0
38 TraesCS2A01G471300 chr5B 80.921 152 20 2 2426 2568 474058733 474058884 1.000000e-20 111.0
39 TraesCS2A01G471300 chr6D 88.330 437 27 8 2 419 17973024 17972593 1.420000e-138 503.0
40 TraesCS2A01G471300 chr6D 93.532 201 11 2 416 614 50959811 50960011 7.180000e-77 298.0
41 TraesCS2A01G471300 chr6D 84.906 106 14 2 2467 2571 2739522 2739418 4.670000e-19 106.0
42 TraesCS2A01G471300 chr6D 97.500 40 0 1 2658 2696 372184319 372184280 2.200000e-07 67.6
43 TraesCS2A01G471300 chr5D 88.101 437 29 9 2 419 545911665 545912097 6.590000e-137 497.0
44 TraesCS2A01G471300 chr5D 87.185 437 34 7 2 419 168013506 168013939 8.590000e-131 477.0
45 TraesCS2A01G471300 chr5D 89.189 148 14 2 416 561 493926721 493926574 2.100000e-42 183.0
46 TraesCS2A01G471300 chr5D 86.139 101 12 2 2467 2567 383296449 383296547 1.300000e-19 108.0
47 TraesCS2A01G471300 chr5D 89.189 74 6 2 2724 2796 45002704 45002776 1.310000e-14 91.6
48 TraesCS2A01G471300 chr1D 87.345 403 30 6 1 384 451395429 451395029 3.130000e-120 442.0
49 TraesCS2A01G471300 chr1D 77.014 422 74 18 1007 1412 69197741 69197327 1.600000e-53 220.0
50 TraesCS2A01G471300 chr1D 73.004 526 114 19 1864 2381 69196976 69196471 3.530000e-35 159.0
51 TraesCS2A01G471300 chr1B 72.683 1230 267 49 1185 2391 111259556 111258373 2.530000e-91 346.0
52 TraesCS2A01G471300 chr1B 82.249 338 56 4 2976 3311 574306297 574305962 4.320000e-74 289.0
53 TraesCS2A01G471300 chr1B 72.913 539 118 18 1864 2394 111051268 111050750 9.820000e-36 161.0
54 TraesCS2A01G471300 chr1B 82.979 94 14 2 2724 2817 225829352 225829443 2.190000e-12 84.2
55 TraesCS2A01G471300 chr7B 91.093 247 19 2 416 659 145042756 145043002 7.080000e-87 331.0
56 TraesCS2A01G471300 chr7B 82.911 316 47 5 2995 3308 71287491 71287801 9.350000e-71 278.0
57 TraesCS2A01G471300 chr7B 87.333 150 14 4 416 561 472402330 472402182 2.110000e-37 167.0
58 TraesCS2A01G471300 chr7B 87.162 148 16 3 416 561 472336845 472336699 7.590000e-37 165.0
59 TraesCS2A01G471300 chr4A 90.244 246 23 1 416 660 269223213 269223458 1.530000e-83 320.0
60 TraesCS2A01G471300 chr7D 94.030 201 10 2 416 614 453288045 453288245 1.540000e-78 303.0
61 TraesCS2A01G471300 chr7D 80.896 335 52 7 2976 3307 211763850 211763525 1.580000e-63 254.0
62 TraesCS2A01G471300 chr7D 85.321 109 11 4 2459 2567 546193279 546193176 1.300000e-19 108.0
63 TraesCS2A01G471300 chr7D 84.314 102 13 3 2467 2567 582646604 582646703 2.810000e-16 97.1
64 TraesCS2A01G471300 chr7D 92.000 50 2 2 2664 2711 629577876 629577827 6.130000e-08 69.4
65 TraesCS2A01G471300 chr3B 93.532 201 11 2 416 614 105588084 105587884 7.180000e-77 298.0
66 TraesCS2A01G471300 chr1A 71.524 1201 281 45 1211 2391 69187984 69186825 2.020000e-67 267.0
67 TraesCS2A01G471300 chr1A 79.724 217 36 5 2182 2394 68459183 68458971 2.130000e-32 150.0
68 TraesCS2A01G471300 chr1A 89.423 104 10 1 2465 2568 301386385 301386487 2.770000e-26 130.0
69 TraesCS2A01G471300 chr1A 94.340 53 3 0 2665 2717 516825298 516825350 7.870000e-12 82.4
70 TraesCS2A01G471300 chr1A 92.308 52 4 0 2665 2716 455600819 455600768 1.320000e-09 75.0
71 TraesCS2A01G471300 chr1A 84.615 65 8 2 2723 2786 516825398 516825461 2.850000e-06 63.9
72 TraesCS2A01G471300 chr5A 84.772 197 27 3 3115 3309 503666996 503667191 9.690000e-46 195.0
73 TraesCS2A01G471300 chr5A 88.060 67 7 1 2661 2726 521741971 521741905 1.020000e-10 78.7
74 TraesCS2A01G471300 chr3A 88.571 105 11 1 2465 2569 447565512 447565409 3.580000e-25 126.0
75 TraesCS2A01G471300 chr3A 96.429 56 2 0 2663 2718 724079655 724079710 3.640000e-15 93.5
76 TraesCS2A01G471300 chr7A 78.010 191 40 2 3118 3307 489562812 489563001 6.000000e-23 119.0
77 TraesCS2A01G471300 chr7A 93.220 59 3 1 2660 2717 519567153 519567211 6.080000e-13 86.1
78 TraesCS2A01G471300 chr7A 94.118 51 3 0 2666 2716 24620170 24620220 1.020000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G471300 chr2A 713530208 713533628 3420 False 6318.0 6318 100.0000 1 3421 1 chr2A.!!$F1 3420
1 TraesCS2A01G471300 chr2D 634407108 634409696 2588 False 1837.5 2483 92.2260 658 3421 2 chr2D.!!$F6 2763
2 TraesCS2A01G471300 chr2D 575238701 575241137 2436 False 1829.5 2501 93.1640 816 3421 2 chr2D.!!$F5 2605
3 TraesCS2A01G471300 chr2B 691416080 691417824 1744 True 2126.0 2126 88.7890 655 2405 1 chr2B.!!$R2 1750
4 TraesCS2A01G471300 chr2B 691268745 691271962 3217 False 1245.5 2049 93.4605 659 2363 2 chr2B.!!$F2 1704
5 TraesCS2A01G471300 chr2B 691282963 691283761 798 False 508.9 941 92.3595 2359 3343 2 chr2B.!!$F3 984
6 TraesCS2A01G471300 chr4B 643893565 643894924 1359 False 662.0 662 75.9310 1015 2386 1 chr4B.!!$F4 1371
7 TraesCS2A01G471300 chr1B 111258373 111259556 1183 True 346.0 346 72.6830 1185 2391 1 chr1B.!!$R2 1206
8 TraesCS2A01G471300 chr1A 69186825 69187984 1159 True 267.0 267 71.5240 1211 2391 1 chr1A.!!$R2 1180

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 625 0.179250 CACACGTGTAAGCGATGTGC 60.179 55.0 22.90 0.0 46.98 4.57 F
652 653 0.462403 ACACGTGTGGGCGTTAGTTT 60.462 50.0 22.71 0.0 43.83 2.66 F
653 654 0.658897 CACGTGTGGGCGTTAGTTTT 59.341 50.0 7.58 0.0 43.83 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1821 3428 0.391661 TGAGGCGGCATGACTTTCTC 60.392 55.000 13.08 1.05 34.35 2.87 R
2297 3913 1.006102 CCCGTCGCTGTTCTTGACT 60.006 57.895 0.00 0.00 0.00 3.41 R
2499 4115 1.205179 TCTCCCGCAAATAACGTAGCA 59.795 47.619 0.00 0.00 0.00 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.509336 GCATAGACTGCGCCGTGT 60.509 61.111 9.91 8.22 41.97 4.49
27 28 2.517450 GCATAGACTGCGCCGTGTC 61.517 63.158 9.91 12.89 41.97 3.67
28 29 1.153842 CATAGACTGCGCCGTGTCA 60.154 57.895 21.38 11.53 35.81 3.58
29 30 1.153823 ATAGACTGCGCCGTGTCAC 60.154 57.895 21.38 4.55 35.81 3.67
30 31 2.558554 ATAGACTGCGCCGTGTCACC 62.559 60.000 21.38 4.22 35.81 4.02
39 40 4.428922 CGTGTCACCGCATGCGTG 62.429 66.667 35.55 30.28 37.81 5.34
40 41 3.345808 GTGTCACCGCATGCGTGT 61.346 61.111 35.55 28.73 37.81 4.49
41 42 2.024868 GTGTCACCGCATGCGTGTA 61.025 57.895 35.55 22.15 37.81 2.90
42 43 1.079474 TGTCACCGCATGCGTGTAT 60.079 52.632 35.55 17.27 37.81 2.29
43 44 1.348250 GTCACCGCATGCGTGTATG 59.652 57.895 35.55 26.31 37.81 2.39
44 45 1.079474 TCACCGCATGCGTGTATGT 60.079 52.632 35.55 23.84 37.81 2.29
45 46 1.060779 CACCGCATGCGTGTATGTG 59.939 57.895 35.55 29.57 38.09 3.21
47 48 3.792904 CGCATGCGTGTATGTGGA 58.207 55.556 31.33 0.00 35.47 4.02
48 49 2.310309 CGCATGCGTGTATGTGGAT 58.690 52.632 31.33 0.00 35.47 3.41
49 50 0.657312 CGCATGCGTGTATGTGGATT 59.343 50.000 31.33 0.00 35.47 3.01
50 51 1.063912 CGCATGCGTGTATGTGGATTT 59.936 47.619 31.33 0.00 35.47 2.17
51 52 2.477694 CGCATGCGTGTATGTGGATTTT 60.478 45.455 31.33 0.00 35.47 1.82
52 53 3.510719 GCATGCGTGTATGTGGATTTTT 58.489 40.909 0.00 0.00 0.00 1.94
101 102 9.549509 TGTTTTATCTCGTAAATGAAAAATCCG 57.450 29.630 0.00 0.00 32.56 4.18
102 103 9.763465 GTTTTATCTCGTAAATGAAAAATCCGA 57.237 29.630 0.00 0.00 32.56 4.55
105 106 9.929722 TTATCTCGTAAATGAAAAATCCGATTG 57.070 29.630 0.00 0.00 0.00 2.67
106 107 7.603963 TCTCGTAAATGAAAAATCCGATTGA 57.396 32.000 0.00 0.00 0.00 2.57
107 108 8.035165 TCTCGTAAATGAAAAATCCGATTGAA 57.965 30.769 0.00 0.00 0.00 2.69
108 109 8.508062 TCTCGTAAATGAAAAATCCGATTGAAA 58.492 29.630 0.00 0.00 0.00 2.69
109 110 9.123709 CTCGTAAATGAAAAATCCGATTGAAAA 57.876 29.630 0.00 0.00 0.00 2.29
110 111 9.632807 TCGTAAATGAAAAATCCGATTGAAAAT 57.367 25.926 0.00 0.00 0.00 1.82
111 112 9.885743 CGTAAATGAAAAATCCGATTGAAAATC 57.114 29.630 0.00 0.00 0.00 2.17
113 114 7.848223 AATGAAAAATCCGATTGAAAATCCC 57.152 32.000 0.00 0.00 0.00 3.85
114 115 6.603940 TGAAAAATCCGATTGAAAATCCCT 57.396 33.333 0.00 0.00 0.00 4.20
115 116 7.003402 TGAAAAATCCGATTGAAAATCCCTT 57.997 32.000 0.00 0.00 0.00 3.95
116 117 6.873076 TGAAAAATCCGATTGAAAATCCCTTG 59.127 34.615 0.00 0.00 0.00 3.61
117 118 4.391405 AATCCGATTGAAAATCCCTTGC 57.609 40.909 0.00 0.00 0.00 4.01
118 119 1.742831 TCCGATTGAAAATCCCTTGCG 59.257 47.619 0.00 0.00 0.00 4.85
119 120 1.742831 CCGATTGAAAATCCCTTGCGA 59.257 47.619 0.00 0.00 0.00 5.10
120 121 2.358898 CCGATTGAAAATCCCTTGCGAT 59.641 45.455 0.00 0.00 0.00 4.58
121 122 3.365832 CGATTGAAAATCCCTTGCGATG 58.634 45.455 0.00 0.00 0.00 3.84
122 123 3.065233 CGATTGAAAATCCCTTGCGATGA 59.935 43.478 0.00 0.00 0.00 2.92
123 124 4.604976 GATTGAAAATCCCTTGCGATGAG 58.395 43.478 0.00 0.00 0.00 2.90
124 125 3.348647 TGAAAATCCCTTGCGATGAGA 57.651 42.857 0.00 0.00 0.00 3.27
125 126 3.889815 TGAAAATCCCTTGCGATGAGAT 58.110 40.909 0.00 0.00 0.00 2.75
126 127 3.879295 TGAAAATCCCTTGCGATGAGATC 59.121 43.478 0.00 0.00 0.00 2.75
127 128 3.853355 AAATCCCTTGCGATGAGATCT 57.147 42.857 0.00 0.00 0.00 2.75
128 129 3.853355 AATCCCTTGCGATGAGATCTT 57.147 42.857 0.00 0.00 0.00 2.40
129 130 2.898729 TCCCTTGCGATGAGATCTTC 57.101 50.000 0.00 0.00 0.00 2.87
130 131 1.067669 TCCCTTGCGATGAGATCTTCG 59.932 52.381 11.64 11.64 43.58 3.79
131 132 1.067669 CCCTTGCGATGAGATCTTCGA 59.932 52.381 18.67 3.64 43.48 3.71
132 133 2.481969 CCCTTGCGATGAGATCTTCGAA 60.482 50.000 18.67 7.16 43.48 3.71
133 134 3.190079 CCTTGCGATGAGATCTTCGAAA 58.810 45.455 18.67 13.94 43.48 3.46
134 135 3.000724 CCTTGCGATGAGATCTTCGAAAC 59.999 47.826 18.67 4.05 43.48 2.78
135 136 3.510388 TGCGATGAGATCTTCGAAACT 57.490 42.857 18.67 0.00 43.48 2.66
136 137 4.632538 TGCGATGAGATCTTCGAAACTA 57.367 40.909 18.67 0.00 43.48 2.24
137 138 4.602006 TGCGATGAGATCTTCGAAACTAG 58.398 43.478 18.67 0.00 43.48 2.57
138 139 4.335594 TGCGATGAGATCTTCGAAACTAGA 59.664 41.667 18.67 0.00 43.48 2.43
139 140 5.009110 TGCGATGAGATCTTCGAAACTAGAT 59.991 40.000 18.67 0.00 43.48 1.98
140 141 5.567534 GCGATGAGATCTTCGAAACTAGATC 59.432 44.000 18.67 14.39 44.54 2.75
190 191 5.765072 TTTTTGTTAAAAGTTGCCGTGTC 57.235 34.783 0.00 0.00 0.00 3.67
191 192 4.705337 TTTGTTAAAAGTTGCCGTGTCT 57.295 36.364 0.00 0.00 0.00 3.41
192 193 5.814764 TTTGTTAAAAGTTGCCGTGTCTA 57.185 34.783 0.00 0.00 0.00 2.59
193 194 6.380095 TTTGTTAAAAGTTGCCGTGTCTAT 57.620 33.333 0.00 0.00 0.00 1.98
194 195 6.380095 TTGTTAAAAGTTGCCGTGTCTATT 57.620 33.333 0.00 0.00 0.00 1.73
195 196 5.753744 TGTTAAAAGTTGCCGTGTCTATTG 58.246 37.500 0.00 0.00 0.00 1.90
196 197 2.989422 AAAGTTGCCGTGTCTATTGC 57.011 45.000 0.00 0.00 0.00 3.56
197 198 1.890876 AAGTTGCCGTGTCTATTGCA 58.109 45.000 0.00 0.00 0.00 4.08
198 199 1.156736 AGTTGCCGTGTCTATTGCAC 58.843 50.000 0.00 0.00 32.63 4.57
199 200 0.871722 GTTGCCGTGTCTATTGCACA 59.128 50.000 0.00 0.00 36.71 4.57
200 201 1.468520 GTTGCCGTGTCTATTGCACAT 59.531 47.619 0.00 0.00 36.71 3.21
201 202 1.085893 TGCCGTGTCTATTGCACATG 58.914 50.000 0.00 0.00 36.71 3.21
202 203 1.338579 TGCCGTGTCTATTGCACATGA 60.339 47.619 0.00 0.00 36.71 3.07
203 204 1.737236 GCCGTGTCTATTGCACATGAA 59.263 47.619 0.00 0.00 36.71 2.57
204 205 2.355756 GCCGTGTCTATTGCACATGAAT 59.644 45.455 0.00 0.00 36.71 2.57
205 206 3.181497 GCCGTGTCTATTGCACATGAATT 60.181 43.478 0.00 0.00 36.71 2.17
206 207 4.345288 CCGTGTCTATTGCACATGAATTG 58.655 43.478 0.00 0.00 36.71 2.32
207 208 3.787634 CGTGTCTATTGCACATGAATTGC 59.212 43.478 0.00 0.00 40.63 3.56
208 209 4.107622 GTGTCTATTGCACATGAATTGCC 58.892 43.478 0.00 0.00 39.39 4.52
209 210 3.762823 TGTCTATTGCACATGAATTGCCA 59.237 39.130 0.00 0.00 39.39 4.92
210 211 4.403113 TGTCTATTGCACATGAATTGCCAT 59.597 37.500 0.00 0.00 39.39 4.40
211 212 5.105269 TGTCTATTGCACATGAATTGCCATT 60.105 36.000 0.00 0.00 39.39 3.16
212 213 6.096564 TGTCTATTGCACATGAATTGCCATTA 59.903 34.615 0.00 0.00 39.39 1.90
213 214 7.149973 GTCTATTGCACATGAATTGCCATTAT 58.850 34.615 0.00 0.00 39.39 1.28
214 215 8.298854 GTCTATTGCACATGAATTGCCATTATA 58.701 33.333 0.00 0.00 39.39 0.98
215 216 9.027202 TCTATTGCACATGAATTGCCATTATAT 57.973 29.630 0.00 0.00 39.39 0.86
216 217 9.647797 CTATTGCACATGAATTGCCATTATATT 57.352 29.630 0.00 0.00 39.39 1.28
217 218 8.911918 ATTGCACATGAATTGCCATTATATTT 57.088 26.923 0.00 0.00 39.39 1.40
218 219 9.999660 ATTGCACATGAATTGCCATTATATTTA 57.000 25.926 0.00 0.00 39.39 1.40
219 220 8.815141 TGCACATGAATTGCCATTATATTTAC 57.185 30.769 0.00 0.00 39.39 2.01
220 221 8.419442 TGCACATGAATTGCCATTATATTTACA 58.581 29.630 0.00 0.00 39.39 2.41
221 222 8.702438 GCACATGAATTGCCATTATATTTACAC 58.298 33.333 0.00 0.00 33.58 2.90
222 223 9.970395 CACATGAATTGCCATTATATTTACACT 57.030 29.630 0.00 0.00 0.00 3.55
223 224 9.970395 ACATGAATTGCCATTATATTTACACTG 57.030 29.630 0.00 0.00 0.00 3.66
230 231 7.479980 TGCCATTATATTTACACTGAAGTTGC 58.520 34.615 0.00 0.00 0.00 4.17
231 232 6.918022 GCCATTATATTTACACTGAAGTTGCC 59.082 38.462 0.00 0.00 0.00 4.52
232 233 7.416213 GCCATTATATTTACACTGAAGTTGCCA 60.416 37.037 0.00 0.00 0.00 4.92
233 234 8.632679 CCATTATATTTACACTGAAGTTGCCAT 58.367 33.333 0.00 0.00 0.00 4.40
234 235 9.454585 CATTATATTTACACTGAAGTTGCCATG 57.545 33.333 0.00 0.00 0.00 3.66
235 236 8.800370 TTATATTTACACTGAAGTTGCCATGA 57.200 30.769 0.00 0.00 0.00 3.07
236 237 7.886629 ATATTTACACTGAAGTTGCCATGAT 57.113 32.000 0.00 0.00 0.00 2.45
237 238 8.978874 ATATTTACACTGAAGTTGCCATGATA 57.021 30.769 0.00 0.00 0.00 2.15
238 239 7.886629 ATTTACACTGAAGTTGCCATGATAT 57.113 32.000 0.00 0.00 0.00 1.63
239 240 6.682423 TTACACTGAAGTTGCCATGATATG 57.318 37.500 0.00 0.00 0.00 1.78
240 241 4.592942 ACACTGAAGTTGCCATGATATGT 58.407 39.130 0.00 0.00 0.00 2.29
241 242 5.012239 ACACTGAAGTTGCCATGATATGTT 58.988 37.500 0.00 0.00 0.00 2.71
242 243 5.477984 ACACTGAAGTTGCCATGATATGTTT 59.522 36.000 0.00 0.00 0.00 2.83
243 244 6.032094 CACTGAAGTTGCCATGATATGTTTC 58.968 40.000 0.00 0.00 0.00 2.78
244 245 5.711506 ACTGAAGTTGCCATGATATGTTTCA 59.288 36.000 0.00 0.00 0.00 2.69
245 246 6.379133 ACTGAAGTTGCCATGATATGTTTCAT 59.621 34.615 0.00 0.00 36.79 2.57
246 247 6.798482 TGAAGTTGCCATGATATGTTTCATC 58.202 36.000 0.00 0.00 34.09 2.92
247 248 6.604396 TGAAGTTGCCATGATATGTTTCATCT 59.396 34.615 0.00 0.00 34.09 2.90
248 249 7.774625 TGAAGTTGCCATGATATGTTTCATCTA 59.225 33.333 0.00 0.00 34.09 1.98
249 250 8.701908 AAGTTGCCATGATATGTTTCATCTAT 57.298 30.769 0.00 0.00 34.09 1.98
250 251 8.701908 AGTTGCCATGATATGTTTCATCTATT 57.298 30.769 0.00 0.00 34.09 1.73
251 252 9.139734 AGTTGCCATGATATGTTTCATCTATTT 57.860 29.630 0.00 0.00 34.09 1.40
252 253 9.754382 GTTGCCATGATATGTTTCATCTATTTT 57.246 29.630 0.00 0.00 34.09 1.82
311 312 7.444629 AAAACGGGGAATTAAGAAACTAGAC 57.555 36.000 0.00 0.00 0.00 2.59
312 313 6.370186 AACGGGGAATTAAGAAACTAGACT 57.630 37.500 0.00 0.00 0.00 3.24
313 314 6.370186 ACGGGGAATTAAGAAACTAGACTT 57.630 37.500 0.00 1.96 0.00 3.01
314 315 6.171213 ACGGGGAATTAAGAAACTAGACTTG 58.829 40.000 0.00 0.00 0.00 3.16
315 316 6.171213 CGGGGAATTAAGAAACTAGACTTGT 58.829 40.000 0.00 0.00 0.00 3.16
316 317 6.313164 CGGGGAATTAAGAAACTAGACTTGTC 59.687 42.308 0.00 0.00 0.00 3.18
317 318 7.166167 GGGGAATTAAGAAACTAGACTTGTCA 58.834 38.462 0.00 0.00 0.00 3.58
318 319 7.829706 GGGGAATTAAGAAACTAGACTTGTCAT 59.170 37.037 0.00 0.00 0.00 3.06
319 320 8.669243 GGGAATTAAGAAACTAGACTTGTCATG 58.331 37.037 0.00 0.00 0.00 3.07
320 321 8.178313 GGAATTAAGAAACTAGACTTGTCATGC 58.822 37.037 0.00 0.00 0.00 4.06
321 322 8.621532 AATTAAGAAACTAGACTTGTCATGCA 57.378 30.769 0.00 0.00 0.00 3.96
322 323 5.931441 AAGAAACTAGACTTGTCATGCAC 57.069 39.130 0.00 0.00 0.00 4.57
323 324 4.319177 AGAAACTAGACTTGTCATGCACC 58.681 43.478 0.00 0.00 0.00 5.01
324 325 3.769739 AACTAGACTTGTCATGCACCA 57.230 42.857 0.00 0.00 0.00 4.17
325 326 3.988976 ACTAGACTTGTCATGCACCAT 57.011 42.857 0.00 0.00 0.00 3.55
326 327 5.420725 AACTAGACTTGTCATGCACCATA 57.579 39.130 0.00 0.00 0.00 2.74
327 328 5.420725 ACTAGACTTGTCATGCACCATAA 57.579 39.130 0.00 0.00 0.00 1.90
328 329 5.804639 ACTAGACTTGTCATGCACCATAAA 58.195 37.500 0.00 0.00 0.00 1.40
329 330 5.643777 ACTAGACTTGTCATGCACCATAAAC 59.356 40.000 0.00 0.00 0.00 2.01
330 331 4.655963 AGACTTGTCATGCACCATAAACT 58.344 39.130 3.49 0.00 0.00 2.66
331 332 5.804639 AGACTTGTCATGCACCATAAACTA 58.195 37.500 3.49 0.00 0.00 2.24
332 333 6.237901 AGACTTGTCATGCACCATAAACTAA 58.762 36.000 3.49 0.00 0.00 2.24
333 334 6.714810 AGACTTGTCATGCACCATAAACTAAA 59.285 34.615 3.49 0.00 0.00 1.85
334 335 7.230510 AGACTTGTCATGCACCATAAACTAAAA 59.769 33.333 3.49 0.00 0.00 1.52
335 336 7.895759 ACTTGTCATGCACCATAAACTAAAAT 58.104 30.769 0.00 0.00 0.00 1.82
336 337 8.367156 ACTTGTCATGCACCATAAACTAAAATT 58.633 29.630 0.00 0.00 0.00 1.82
337 338 8.531622 TTGTCATGCACCATAAACTAAAATTG 57.468 30.769 0.00 0.00 0.00 2.32
338 339 6.589523 TGTCATGCACCATAAACTAAAATTGC 59.410 34.615 0.00 0.00 0.00 3.56
339 340 6.035975 GTCATGCACCATAAACTAAAATTGCC 59.964 38.462 0.00 0.00 0.00 4.52
340 341 5.474578 TGCACCATAAACTAAAATTGCCA 57.525 34.783 0.00 0.00 0.00 4.92
341 342 6.047511 TGCACCATAAACTAAAATTGCCAT 57.952 33.333 0.00 0.00 0.00 4.40
342 343 5.873712 TGCACCATAAACTAAAATTGCCATG 59.126 36.000 0.00 0.00 0.00 3.66
343 344 6.105333 GCACCATAAACTAAAATTGCCATGA 58.895 36.000 0.00 0.00 0.00 3.07
344 345 6.762661 GCACCATAAACTAAAATTGCCATGAT 59.237 34.615 0.00 0.00 0.00 2.45
345 346 7.925483 GCACCATAAACTAAAATTGCCATGATA 59.075 33.333 0.00 0.00 0.00 2.15
346 347 9.248291 CACCATAAACTAAAATTGCCATGATAC 57.752 33.333 0.00 0.00 0.00 2.24
347 348 8.976353 ACCATAAACTAAAATTGCCATGATACA 58.024 29.630 0.00 0.00 0.00 2.29
348 349 9.985730 CCATAAACTAAAATTGCCATGATACAT 57.014 29.630 0.00 0.00 0.00 2.29
350 351 7.775397 AAACTAAAATTGCCATGATACATGC 57.225 32.000 0.00 3.56 0.00 4.06
351 352 6.468333 ACTAAAATTGCCATGATACATGCA 57.532 33.333 0.00 0.00 0.00 3.96
352 353 6.275335 ACTAAAATTGCCATGATACATGCAC 58.725 36.000 0.00 2.20 32.63 4.57
353 354 5.347620 AAAATTGCCATGATACATGCACT 57.652 34.783 0.00 1.37 32.63 4.40
354 355 5.347620 AAATTGCCATGATACATGCACTT 57.652 34.783 0.00 6.23 32.63 3.16
355 356 6.468333 AAATTGCCATGATACATGCACTTA 57.532 33.333 0.00 0.00 32.63 2.24
356 357 6.468333 AATTGCCATGATACATGCACTTAA 57.532 33.333 0.00 0.00 32.63 1.85
357 358 5.911378 TTGCCATGATACATGCACTTAAA 57.089 34.783 0.00 0.00 32.63 1.52
358 359 5.911378 TGCCATGATACATGCACTTAAAA 57.089 34.783 0.00 0.00 0.00 1.52
359 360 6.278172 TGCCATGATACATGCACTTAAAAA 57.722 33.333 0.00 0.00 0.00 1.94
407 408 9.927668 AAAATATTTTCATGGTCAAAGTACTGG 57.072 29.630 7.64 0.00 0.00 4.00
408 409 8.877864 AATATTTTCATGGTCAAAGTACTGGA 57.122 30.769 0.00 0.00 0.00 3.86
409 410 6.824305 ATTTTCATGGTCAAAGTACTGGAG 57.176 37.500 0.00 0.00 0.00 3.86
410 411 4.974645 TTCATGGTCAAAGTACTGGAGT 57.025 40.909 0.00 0.00 0.00 3.85
411 412 4.974645 TCATGGTCAAAGTACTGGAGTT 57.025 40.909 0.00 0.00 0.00 3.01
412 413 4.641396 TCATGGTCAAAGTACTGGAGTTG 58.359 43.478 0.00 0.00 0.00 3.16
413 414 2.846193 TGGTCAAAGTACTGGAGTTGC 58.154 47.619 0.00 0.00 0.00 4.17
414 415 2.152016 GGTCAAAGTACTGGAGTTGCC 58.848 52.381 0.00 0.00 37.10 4.52
415 416 2.486548 GGTCAAAGTACTGGAGTTGCCA 60.487 50.000 0.00 0.00 46.96 4.92
433 434 3.652057 CCATCAACATGGGGTCTAGTT 57.348 47.619 0.00 0.00 45.63 2.24
434 435 3.968265 CCATCAACATGGGGTCTAGTTT 58.032 45.455 0.00 0.00 45.63 2.66
435 436 4.344104 CCATCAACATGGGGTCTAGTTTT 58.656 43.478 0.00 0.00 45.63 2.43
436 437 4.158394 CCATCAACATGGGGTCTAGTTTTG 59.842 45.833 0.00 0.00 45.63 2.44
437 438 4.715534 TCAACATGGGGTCTAGTTTTGA 57.284 40.909 0.00 0.00 0.00 2.69
438 439 5.055265 TCAACATGGGGTCTAGTTTTGAA 57.945 39.130 0.00 0.00 0.00 2.69
439 440 5.070001 TCAACATGGGGTCTAGTTTTGAAG 58.930 41.667 0.00 0.00 0.00 3.02
440 441 4.993705 ACATGGGGTCTAGTTTTGAAGA 57.006 40.909 0.00 0.00 0.00 2.87
441 442 5.520748 ACATGGGGTCTAGTTTTGAAGAT 57.479 39.130 0.00 0.00 0.00 2.40
442 443 5.501156 ACATGGGGTCTAGTTTTGAAGATC 58.499 41.667 0.00 0.00 0.00 2.75
443 444 5.251700 ACATGGGGTCTAGTTTTGAAGATCT 59.748 40.000 0.00 0.00 0.00 2.75
444 445 5.422214 TGGGGTCTAGTTTTGAAGATCTC 57.578 43.478 0.00 0.00 0.00 2.75
445 446 4.081642 TGGGGTCTAGTTTTGAAGATCTCG 60.082 45.833 0.00 0.00 0.00 4.04
446 447 4.081586 GGGGTCTAGTTTTGAAGATCTCGT 60.082 45.833 0.00 0.00 0.00 4.18
447 448 5.103687 GGGTCTAGTTTTGAAGATCTCGTC 58.896 45.833 0.00 0.00 0.00 4.20
448 449 4.794246 GGTCTAGTTTTGAAGATCTCGTCG 59.206 45.833 0.00 0.00 0.00 5.12
449 450 5.391736 GGTCTAGTTTTGAAGATCTCGTCGA 60.392 44.000 0.00 0.00 0.00 4.20
450 451 5.735427 GTCTAGTTTTGAAGATCTCGTCGAG 59.265 44.000 16.33 16.33 0.00 4.04
451 452 4.768130 AGTTTTGAAGATCTCGTCGAGA 57.232 40.909 26.15 26.15 43.20 4.04
452 453 4.477780 AGTTTTGAAGATCTCGTCGAGAC 58.522 43.478 26.46 18.95 41.76 3.36
468 469 6.583912 GTCGAGACGGATTTAATGATGAAA 57.416 37.500 0.00 0.00 0.00 2.69
469 470 7.000575 GTCGAGACGGATTTAATGATGAAAA 57.999 36.000 0.00 0.00 0.00 2.29
470 471 7.461107 GTCGAGACGGATTTAATGATGAAAAA 58.539 34.615 0.00 0.00 0.00 1.94
519 520 7.696992 AGGAGATAAAACATTTTTAAGCCGA 57.303 32.000 0.00 0.00 0.00 5.54
520 521 8.117813 AGGAGATAAAACATTTTTAAGCCGAA 57.882 30.769 0.00 0.00 0.00 4.30
521 522 8.581578 AGGAGATAAAACATTTTTAAGCCGAAA 58.418 29.630 0.00 0.00 0.00 3.46
522 523 9.198837 GGAGATAAAACATTTTTAAGCCGAAAA 57.801 29.630 0.00 0.00 0.00 2.29
524 525 8.984764 AGATAAAACATTTTTAAGCCGAAAACC 58.015 29.630 0.00 0.00 0.00 3.27
525 526 6.986904 AAAACATTTTTAAGCCGAAAACCA 57.013 29.167 0.00 0.00 0.00 3.67
526 527 6.986904 AAACATTTTTAAGCCGAAAACCAA 57.013 29.167 0.00 0.00 0.00 3.67
527 528 6.986904 AACATTTTTAAGCCGAAAACCAAA 57.013 29.167 0.00 0.00 0.00 3.28
528 529 6.986904 ACATTTTTAAGCCGAAAACCAAAA 57.013 29.167 0.00 0.00 0.00 2.44
529 530 7.379098 ACATTTTTAAGCCGAAAACCAAAAA 57.621 28.000 0.00 0.00 31.65 1.94
551 552 6.585695 AAAAATCTGCTGATGTGATCTGTT 57.414 33.333 6.88 0.00 32.44 3.16
552 553 5.814764 AAATCTGCTGATGTGATCTGTTC 57.185 39.130 6.88 0.00 32.44 3.18
553 554 3.967332 TCTGCTGATGTGATCTGTTCA 57.033 42.857 0.00 0.00 0.00 3.18
554 555 4.482952 TCTGCTGATGTGATCTGTTCAT 57.517 40.909 0.00 0.00 36.54 2.57
555 556 5.603170 TCTGCTGATGTGATCTGTTCATA 57.397 39.130 0.00 0.00 36.54 2.15
556 557 5.354767 TCTGCTGATGTGATCTGTTCATAC 58.645 41.667 0.00 0.00 36.54 2.39
557 558 4.114794 TGCTGATGTGATCTGTTCATACG 58.885 43.478 0.00 0.00 36.54 3.06
558 559 4.115516 GCTGATGTGATCTGTTCATACGT 58.884 43.478 0.00 0.00 36.54 3.57
559 560 4.026228 GCTGATGTGATCTGTTCATACGTG 60.026 45.833 0.00 0.00 36.54 4.49
560 561 4.432712 TGATGTGATCTGTTCATACGTGG 58.567 43.478 0.00 0.00 36.54 4.94
561 562 3.245518 TGTGATCTGTTCATACGTGGG 57.754 47.619 0.00 0.00 36.54 4.61
562 563 2.829120 TGTGATCTGTTCATACGTGGGA 59.171 45.455 0.00 0.00 36.54 4.37
563 564 3.259625 TGTGATCTGTTCATACGTGGGAA 59.740 43.478 0.00 0.00 36.54 3.97
564 565 4.250464 GTGATCTGTTCATACGTGGGAAA 58.750 43.478 0.00 0.00 36.54 3.13
565 566 4.693566 GTGATCTGTTCATACGTGGGAAAA 59.306 41.667 0.00 0.00 36.54 2.29
566 567 5.354234 GTGATCTGTTCATACGTGGGAAAAT 59.646 40.000 0.00 0.00 36.54 1.82
567 568 5.353956 TGATCTGTTCATACGTGGGAAAATG 59.646 40.000 0.00 0.00 0.00 2.32
568 569 4.900684 TCTGTTCATACGTGGGAAAATGA 58.099 39.130 0.00 0.00 0.00 2.57
569 570 4.935205 TCTGTTCATACGTGGGAAAATGAG 59.065 41.667 0.00 0.00 30.53 2.90
570 571 4.647611 TGTTCATACGTGGGAAAATGAGT 58.352 39.130 0.00 0.00 30.53 3.41
571 572 4.454161 TGTTCATACGTGGGAAAATGAGTG 59.546 41.667 0.00 0.00 30.53 3.51
572 573 3.605634 TCATACGTGGGAAAATGAGTGG 58.394 45.455 0.00 0.00 0.00 4.00
573 574 3.008594 TCATACGTGGGAAAATGAGTGGT 59.991 43.478 0.00 0.00 0.00 4.16
574 575 1.604604 ACGTGGGAAAATGAGTGGTG 58.395 50.000 0.00 0.00 0.00 4.17
575 576 1.142060 ACGTGGGAAAATGAGTGGTGA 59.858 47.619 0.00 0.00 0.00 4.02
576 577 2.224769 ACGTGGGAAAATGAGTGGTGAT 60.225 45.455 0.00 0.00 0.00 3.06
577 578 2.162208 CGTGGGAAAATGAGTGGTGATG 59.838 50.000 0.00 0.00 0.00 3.07
578 579 2.493278 GTGGGAAAATGAGTGGTGATGG 59.507 50.000 0.00 0.00 0.00 3.51
579 580 2.378208 TGGGAAAATGAGTGGTGATGGA 59.622 45.455 0.00 0.00 0.00 3.41
580 581 3.019564 GGGAAAATGAGTGGTGATGGAG 58.980 50.000 0.00 0.00 0.00 3.86
581 582 3.308402 GGGAAAATGAGTGGTGATGGAGA 60.308 47.826 0.00 0.00 0.00 3.71
582 583 3.691609 GGAAAATGAGTGGTGATGGAGAC 59.308 47.826 0.00 0.00 0.00 3.36
583 584 2.680312 AATGAGTGGTGATGGAGACG 57.320 50.000 0.00 0.00 0.00 4.18
584 585 1.561643 ATGAGTGGTGATGGAGACGT 58.438 50.000 0.00 0.00 0.00 4.34
585 586 0.603065 TGAGTGGTGATGGAGACGTG 59.397 55.000 0.00 0.00 0.00 4.49
586 587 0.603569 GAGTGGTGATGGAGACGTGT 59.396 55.000 0.00 0.00 0.00 4.49
587 588 0.318441 AGTGGTGATGGAGACGTGTG 59.682 55.000 0.00 0.00 0.00 3.82
588 589 0.670546 GTGGTGATGGAGACGTGTGG 60.671 60.000 0.00 0.00 0.00 4.17
589 590 1.079127 GGTGATGGAGACGTGTGGG 60.079 63.158 0.00 0.00 0.00 4.61
590 591 1.741770 GTGATGGAGACGTGTGGGC 60.742 63.158 0.00 0.00 0.00 5.36
591 592 2.509336 GATGGAGACGTGTGGGCG 60.509 66.667 0.00 0.00 37.94 6.13
592 593 2.994995 ATGGAGACGTGTGGGCGA 60.995 61.111 0.00 0.00 35.59 5.54
593 594 2.298158 GATGGAGACGTGTGGGCGAT 62.298 60.000 0.00 0.00 35.59 4.58
594 595 2.509336 GGAGACGTGTGGGCGATG 60.509 66.667 0.00 0.00 35.59 3.84
595 596 2.261671 GAGACGTGTGGGCGATGT 59.738 61.111 0.00 0.00 35.59 3.06
596 597 2.048222 AGACGTGTGGGCGATGTG 60.048 61.111 0.00 0.00 35.59 3.21
597 598 3.788766 GACGTGTGGGCGATGTGC 61.789 66.667 0.00 0.00 45.38 4.57
606 607 4.036804 GCGATGTGCAAACGCCCA 62.037 61.111 18.18 0.00 45.35 5.36
607 608 2.126888 CGATGTGCAAACGCCCAC 60.127 61.111 0.00 0.00 0.00 4.61
608 609 2.902419 CGATGTGCAAACGCCCACA 61.902 57.895 0.00 0.00 45.01 4.17
609 610 1.371635 GATGTGCAAACGCCCACAC 60.372 57.895 0.00 0.00 43.89 3.82
610 611 3.192954 ATGTGCAAACGCCCACACG 62.193 57.895 0.00 0.00 43.89 4.49
617 618 2.663852 ACGCCCACACGTGTAAGC 60.664 61.111 22.90 24.04 46.28 3.09
618 619 3.773630 CGCCCACACGTGTAAGCG 61.774 66.667 34.91 34.91 40.54 4.68
619 620 2.356553 GCCCACACGTGTAAGCGA 60.357 61.111 22.90 0.00 35.59 4.93
620 621 1.740296 GCCCACACGTGTAAGCGAT 60.740 57.895 22.90 0.00 35.59 4.58
621 622 1.966493 GCCCACACGTGTAAGCGATG 61.966 60.000 22.90 7.00 35.59 3.84
622 623 0.669318 CCCACACGTGTAAGCGATGT 60.669 55.000 22.90 0.00 35.59 3.06
623 624 0.438445 CCACACGTGTAAGCGATGTG 59.562 55.000 22.90 5.41 40.24 3.21
624 625 0.179250 CACACGTGTAAGCGATGTGC 60.179 55.000 22.90 0.00 46.98 4.57
633 634 2.572812 GCGATGTGCAAATGCCCA 59.427 55.556 0.00 0.00 45.45 5.36
634 635 1.806758 GCGATGTGCAAATGCCCAC 60.807 57.895 0.00 0.00 45.45 4.61
635 636 1.585517 CGATGTGCAAATGCCCACA 59.414 52.632 0.00 2.02 45.01 4.17
636 637 0.733566 CGATGTGCAAATGCCCACAC 60.734 55.000 0.00 0.00 43.89 3.82
637 638 0.733566 GATGTGCAAATGCCCACACG 60.734 55.000 0.00 0.00 43.89 4.49
638 639 1.462731 ATGTGCAAATGCCCACACGT 61.463 50.000 2.46 0.00 43.89 4.49
639 640 1.661197 GTGCAAATGCCCACACGTG 60.661 57.895 15.48 15.48 41.18 4.49
640 641 2.124060 TGCAAATGCCCACACGTGT 61.124 52.632 17.22 17.22 41.18 4.49
641 642 1.661197 GCAAATGCCCACACGTGTG 60.661 57.895 36.13 36.13 45.23 3.82
649 650 3.240203 CACACGTGTGGGCGTTAG 58.760 61.111 35.65 12.08 43.83 2.34
650 651 1.593209 CACACGTGTGGGCGTTAGT 60.593 57.895 35.65 1.12 43.83 2.24
651 652 1.144496 ACACGTGTGGGCGTTAGTT 59.856 52.632 22.71 0.00 43.83 2.24
652 653 0.462403 ACACGTGTGGGCGTTAGTTT 60.462 50.000 22.71 0.00 43.83 2.66
653 654 0.658897 CACGTGTGGGCGTTAGTTTT 59.341 50.000 7.58 0.00 43.83 2.43
654 655 1.064357 CACGTGTGGGCGTTAGTTTTT 59.936 47.619 7.58 0.00 43.83 1.94
655 656 1.331447 ACGTGTGGGCGTTAGTTTTTC 59.669 47.619 0.00 0.00 43.04 2.29
656 657 1.334329 CGTGTGGGCGTTAGTTTTTCC 60.334 52.381 0.00 0.00 0.00 3.13
657 658 0.945813 TGTGGGCGTTAGTTTTTCCG 59.054 50.000 0.00 0.00 0.00 4.30
869 886 0.740737 GATTGGTCCGAGGCATTTGG 59.259 55.000 0.00 0.00 0.00 3.28
906 941 7.093640 ACAGTACAGTAATGGATTAGGAACGAA 60.094 37.037 12.50 0.00 0.00 3.85
913 948 2.074339 GATTAGGAACGAACGGCGCG 62.074 60.000 6.90 0.00 46.04 6.86
914 949 2.824071 ATTAGGAACGAACGGCGCGT 62.824 55.000 6.90 6.80 46.04 6.01
917 952 4.696172 GAACGAACGGCGCGTGTG 62.696 66.667 12.96 0.00 46.04 3.82
919 954 4.627447 ACGAACGGCGCGTGTGTA 62.627 61.111 6.90 0.00 46.04 2.90
961 2514 3.933332 CTCCGGACACTTGATACCTTTTC 59.067 47.826 0.00 0.00 0.00 2.29
976 2531 3.052036 CCTTTTCCATGCAGAAACAACG 58.948 45.455 0.88 0.00 35.53 4.10
996 2552 4.466827 ACGGAACAAAATTAGAACACCCT 58.533 39.130 0.00 0.00 0.00 4.34
1027 2583 1.291588 CTCAGCTTCACCGTGCTCT 59.708 57.895 0.00 0.00 37.44 4.09
1303 2859 1.068417 CAAGGGGTGACGTTCGTCA 59.932 57.895 21.38 21.38 42.09 4.35
1448 3007 3.139025 CCCCTGGTGATCATTCAGGTAAT 59.861 47.826 29.90 0.00 44.78 1.89
1451 3010 6.364701 CCCTGGTGATCATTCAGGTAATTAA 58.635 40.000 29.90 0.00 44.78 1.40
1453 3012 6.016777 CCTGGTGATCATTCAGGTAATTAAGC 60.017 42.308 26.90 2.17 42.17 3.09
1808 3415 2.031465 GTGTTCGGCCCTTCGGAA 59.969 61.111 0.00 0.00 0.00 4.30
1975 3582 2.740055 CGTGAGGAGGCACAGCAC 60.740 66.667 0.00 0.00 38.69 4.40
2072 3685 4.749310 AGCTGCTCGTTGGCGGAG 62.749 66.667 0.00 0.00 40.74 4.63
2396 4012 2.355513 GGAGATCCAGAGCTTGCTCAAA 60.356 50.000 22.44 9.18 35.64 2.69
2399 4015 2.469274 TCCAGAGCTTGCTCAAAGAG 57.531 50.000 22.44 7.87 38.24 2.85
2405 4021 5.163468 CCAGAGCTTGCTCAAAGAGAGTATA 60.163 44.000 22.44 0.00 46.47 1.47
2406 4022 5.978919 CAGAGCTTGCTCAAAGAGAGTATAG 59.021 44.000 22.44 0.00 46.47 1.31
2407 4023 5.656416 AGAGCTTGCTCAAAGAGAGTATAGT 59.344 40.000 22.44 0.00 46.47 2.12
2408 4024 6.154363 AGAGCTTGCTCAAAGAGAGTATAGTT 59.846 38.462 22.44 0.00 46.47 2.24
2409 4025 6.105333 AGCTTGCTCAAAGAGAGTATAGTTG 58.895 40.000 0.00 0.00 46.47 3.16
2410 4026 5.293079 GCTTGCTCAAAGAGAGTATAGTTGG 59.707 44.000 0.00 0.00 46.47 3.77
2411 4027 5.344743 TGCTCAAAGAGAGTATAGTTGGG 57.655 43.478 0.00 0.00 46.47 4.12
2412 4028 4.777896 TGCTCAAAGAGAGTATAGTTGGGT 59.222 41.667 0.00 0.00 46.47 4.51
2413 4029 5.105310 TGCTCAAAGAGAGTATAGTTGGGTC 60.105 44.000 0.00 0.00 46.47 4.46
2414 4030 5.128008 GCTCAAAGAGAGTATAGTTGGGTCT 59.872 44.000 0.00 0.00 46.47 3.85
2415 4031 6.531503 TCAAAGAGAGTATAGTTGGGTCTG 57.468 41.667 0.00 0.00 0.00 3.51
2416 4032 6.017192 TCAAAGAGAGTATAGTTGGGTCTGT 58.983 40.000 0.00 0.00 0.00 3.41
2417 4033 6.497259 TCAAAGAGAGTATAGTTGGGTCTGTT 59.503 38.462 0.00 0.00 0.00 3.16
2418 4034 6.936968 AAGAGAGTATAGTTGGGTCTGTTT 57.063 37.500 0.00 0.00 0.00 2.83
2419 4035 8.311836 CAAAGAGAGTATAGTTGGGTCTGTTTA 58.688 37.037 0.00 0.00 31.15 2.01
2420 4036 7.648039 AGAGAGTATAGTTGGGTCTGTTTAG 57.352 40.000 0.00 0.00 0.00 1.85
2421 4037 6.097129 AGAGAGTATAGTTGGGTCTGTTTAGC 59.903 42.308 0.00 0.00 0.00 3.09
2422 4038 5.720041 AGAGTATAGTTGGGTCTGTTTAGCA 59.280 40.000 0.00 0.00 0.00 3.49
2423 4039 5.731591 AGTATAGTTGGGTCTGTTTAGCAC 58.268 41.667 0.00 0.00 0.00 4.40
2424 4040 4.634012 ATAGTTGGGTCTGTTTAGCACA 57.366 40.909 0.00 0.00 0.00 4.57
2447 4063 8.948401 ACAGACCTAGATGTGACATATCTAAT 57.052 34.615 18.98 12.21 36.87 1.73
2501 4117 9.260002 TCTCAATTTCTTTTTATTCCTTGTTGC 57.740 29.630 0.00 0.00 0.00 4.17
2502 4118 9.264719 CTCAATTTCTTTTTATTCCTTGTTGCT 57.735 29.630 0.00 0.00 0.00 3.91
2505 4121 8.742554 ATTTCTTTTTATTCCTTGTTGCTACG 57.257 30.769 0.00 0.00 0.00 3.51
2506 4122 6.870971 TCTTTTTATTCCTTGTTGCTACGT 57.129 33.333 0.00 0.00 0.00 3.57
2507 4123 7.266922 TCTTTTTATTCCTTGTTGCTACGTT 57.733 32.000 0.00 0.00 0.00 3.99
2508 4124 8.380743 TCTTTTTATTCCTTGTTGCTACGTTA 57.619 30.769 0.00 0.00 0.00 3.18
2509 4125 9.005777 TCTTTTTATTCCTTGTTGCTACGTTAT 57.994 29.630 0.00 0.00 0.00 1.89
2510 4126 9.620660 CTTTTTATTCCTTGTTGCTACGTTATT 57.379 29.630 0.00 0.00 0.00 1.40
2511 4127 9.968870 TTTTTATTCCTTGTTGCTACGTTATTT 57.031 25.926 0.00 0.00 0.00 1.40
2512 4128 8.958175 TTTATTCCTTGTTGCTACGTTATTTG 57.042 30.769 0.00 0.00 0.00 2.32
2513 4129 4.413495 TCCTTGTTGCTACGTTATTTGC 57.587 40.909 0.00 0.00 0.00 3.68
2514 4130 3.120477 TCCTTGTTGCTACGTTATTTGCG 60.120 43.478 0.00 0.00 0.00 4.85
2515 4131 2.884663 TGTTGCTACGTTATTTGCGG 57.115 45.000 0.00 0.00 0.00 5.69
2516 4132 1.465387 TGTTGCTACGTTATTTGCGGG 59.535 47.619 0.00 0.00 0.00 6.13
2517 4133 1.733360 GTTGCTACGTTATTTGCGGGA 59.267 47.619 0.00 0.00 0.00 5.14
2518 4134 1.647346 TGCTACGTTATTTGCGGGAG 58.353 50.000 0.00 0.00 0.00 4.30
2519 4135 1.205179 TGCTACGTTATTTGCGGGAGA 59.795 47.619 0.00 0.00 0.00 3.71
2520 4136 2.159014 TGCTACGTTATTTGCGGGAGAT 60.159 45.455 0.00 0.00 0.00 2.75
2521 4137 2.870411 GCTACGTTATTTGCGGGAGATT 59.130 45.455 0.00 0.00 0.00 2.40
2522 4138 4.053295 GCTACGTTATTTGCGGGAGATTA 58.947 43.478 0.00 0.00 0.00 1.75
2523 4139 4.150098 GCTACGTTATTTGCGGGAGATTAG 59.850 45.833 0.00 0.00 0.00 1.73
2524 4140 4.395959 ACGTTATTTGCGGGAGATTAGA 57.604 40.909 0.00 0.00 0.00 2.10
2525 4141 4.957296 ACGTTATTTGCGGGAGATTAGAT 58.043 39.130 0.00 0.00 0.00 1.98
2526 4142 4.750098 ACGTTATTTGCGGGAGATTAGATG 59.250 41.667 0.00 0.00 0.00 2.90
2527 4143 4.750098 CGTTATTTGCGGGAGATTAGATGT 59.250 41.667 0.00 0.00 0.00 3.06
2528 4144 5.333339 CGTTATTTGCGGGAGATTAGATGTG 60.333 44.000 0.00 0.00 0.00 3.21
2529 4145 3.904800 TTTGCGGGAGATTAGATGTGA 57.095 42.857 0.00 0.00 0.00 3.58
2530 4146 2.890808 TGCGGGAGATTAGATGTGAC 57.109 50.000 0.00 0.00 0.00 3.67
2531 4147 2.107366 TGCGGGAGATTAGATGTGACA 58.893 47.619 0.00 0.00 0.00 3.58
2532 4148 2.700371 TGCGGGAGATTAGATGTGACAT 59.300 45.455 0.00 0.00 0.00 3.06
2533 4149 3.134623 TGCGGGAGATTAGATGTGACATT 59.865 43.478 0.00 0.00 0.00 2.71
2534 4150 3.743396 GCGGGAGATTAGATGTGACATTC 59.257 47.826 0.00 0.00 0.00 2.67
2535 4151 4.502259 GCGGGAGATTAGATGTGACATTCT 60.502 45.833 0.00 0.00 0.00 2.40
2536 4152 5.605534 CGGGAGATTAGATGTGACATTCTT 58.394 41.667 0.00 0.00 0.00 2.52
2537 4153 6.738731 GCGGGAGATTAGATGTGACATTCTTA 60.739 42.308 0.00 0.00 0.00 2.10
2538 4154 6.865726 CGGGAGATTAGATGTGACATTCTTAG 59.134 42.308 0.00 0.00 0.00 2.18
2539 4155 7.255625 CGGGAGATTAGATGTGACATTCTTAGA 60.256 40.741 0.00 0.00 0.00 2.10
2540 4156 8.424918 GGGAGATTAGATGTGACATTCTTAGAA 58.575 37.037 0.00 0.00 0.00 2.10
2541 4157 9.823647 GGAGATTAGATGTGACATTCTTAGAAA 57.176 33.333 0.00 0.00 0.00 2.52
2599 4215 8.943594 TTAAACAGCCCTAGAAAATTCCTAAA 57.056 30.769 0.00 0.00 0.00 1.85
2630 4246 0.402121 GCCAGGTTTCTTGTCCCTCT 59.598 55.000 0.00 0.00 0.00 3.69
2643 4259 5.592688 TCTTGTCCCTCTTTTTCGAAACAAT 59.407 36.000 10.79 0.00 0.00 2.71
2755 4376 6.322201 CACTTCCATCCATTTACAGCCTTAAT 59.678 38.462 0.00 0.00 0.00 1.40
2806 4427 5.698741 TTAGCCCCTCATGTGATATATGG 57.301 43.478 0.00 0.00 0.00 2.74
2826 4447 3.057456 TGGCCGCAATTTTACGTGTATTT 60.057 39.130 0.00 0.00 0.00 1.40
2929 4550 2.011947 CATGCAGTCGACCACATTGAT 58.988 47.619 13.01 0.00 0.00 2.57
2937 4558 2.150390 CGACCACATTGATGAACACCA 58.850 47.619 0.00 0.00 0.00 4.17
2992 4613 1.281577 TGGATGCATGTACTGAGGCAA 59.718 47.619 2.46 0.00 40.02 4.52
2993 4614 1.672881 GGATGCATGTACTGAGGCAAC 59.327 52.381 2.46 0.00 40.02 4.17
3146 4768 2.038820 ACAAACCAATGAGGGGCAAATG 59.961 45.455 0.00 0.00 43.89 2.32
3267 4889 5.508200 AAGTTTTGCGGTGTCAAATAAGA 57.492 34.783 0.00 0.00 36.04 2.10
3408 5030 6.040166 GGGACTTGGTTATGTCTTAGTCGATA 59.960 42.308 0.00 0.00 34.34 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.153842 TGACACGGCGCAGTCTATG 60.154 57.895 26.13 11.36 35.81 2.23
11 12 1.153823 GTGACACGGCGCAGTCTAT 60.154 57.895 26.13 8.09 35.81 1.98
12 13 2.257371 GTGACACGGCGCAGTCTA 59.743 61.111 26.13 14.45 35.81 2.59
13 14 4.664677 GGTGACACGGCGCAGTCT 62.665 66.667 26.13 8.19 35.81 3.24
22 23 4.428922 CACGCATGCGGTGACACG 62.429 66.667 39.95 17.25 44.69 4.49
23 24 1.358725 ATACACGCATGCGGTGACAC 61.359 55.000 39.95 0.00 44.69 3.67
24 25 1.079474 ATACACGCATGCGGTGACA 60.079 52.632 39.95 25.82 44.69 3.58
25 26 1.348250 CATACACGCATGCGGTGAC 59.652 57.895 39.95 0.00 44.69 3.67
26 27 1.079474 ACATACACGCATGCGGTGA 60.079 52.632 39.95 25.61 44.69 4.02
27 28 1.060779 CACATACACGCATGCGGTG 59.939 57.895 39.95 33.49 44.69 4.94
28 29 2.106074 CCACATACACGCATGCGGT 61.106 57.895 39.95 33.44 44.69 5.68
29 30 1.159713 ATCCACATACACGCATGCGG 61.160 55.000 39.95 30.20 44.69 5.69
30 31 0.657312 AATCCACATACACGCATGCG 59.343 50.000 36.79 36.79 46.03 4.73
31 32 2.849880 AAATCCACATACACGCATGC 57.150 45.000 7.91 7.91 0.00 4.06
75 76 9.549509 CGGATTTTTCATTTACGAGATAAAACA 57.450 29.630 0.00 0.00 36.35 2.83
76 77 9.763465 TCGGATTTTTCATTTACGAGATAAAAC 57.237 29.630 0.00 0.00 36.35 2.43
79 80 9.929722 CAATCGGATTTTTCATTTACGAGATAA 57.070 29.630 0.00 0.00 32.14 1.75
80 81 9.320352 TCAATCGGATTTTTCATTTACGAGATA 57.680 29.630 0.00 0.00 32.14 1.98
81 82 8.208718 TCAATCGGATTTTTCATTTACGAGAT 57.791 30.769 0.00 0.00 32.14 2.75
82 83 7.603963 TCAATCGGATTTTTCATTTACGAGA 57.396 32.000 0.00 0.00 32.14 4.04
83 84 8.667987 TTTCAATCGGATTTTTCATTTACGAG 57.332 30.769 0.00 0.00 32.14 4.18
84 85 9.632807 ATTTTCAATCGGATTTTTCATTTACGA 57.367 25.926 0.00 0.00 0.00 3.43
85 86 9.885743 GATTTTCAATCGGATTTTTCATTTACG 57.114 29.630 0.00 0.00 0.00 3.18
87 88 9.377312 GGGATTTTCAATCGGATTTTTCATTTA 57.623 29.630 0.00 0.00 0.00 1.40
88 89 8.102676 AGGGATTTTCAATCGGATTTTTCATTT 58.897 29.630 0.00 0.00 0.00 2.32
89 90 7.623630 AGGGATTTTCAATCGGATTTTTCATT 58.376 30.769 0.00 0.00 0.00 2.57
90 91 7.186570 AGGGATTTTCAATCGGATTTTTCAT 57.813 32.000 0.00 0.00 0.00 2.57
91 92 6.603940 AGGGATTTTCAATCGGATTTTTCA 57.396 33.333 0.00 0.00 0.00 2.69
92 93 6.183360 GCAAGGGATTTTCAATCGGATTTTTC 60.183 38.462 0.00 0.00 0.00 2.29
93 94 5.643348 GCAAGGGATTTTCAATCGGATTTTT 59.357 36.000 0.00 0.00 0.00 1.94
94 95 5.178061 GCAAGGGATTTTCAATCGGATTTT 58.822 37.500 0.00 0.00 0.00 1.82
95 96 4.677779 CGCAAGGGATTTTCAATCGGATTT 60.678 41.667 0.00 0.00 0.00 2.17
96 97 3.181487 CGCAAGGGATTTTCAATCGGATT 60.181 43.478 0.00 0.00 0.00 3.01
97 98 2.358898 CGCAAGGGATTTTCAATCGGAT 59.641 45.455 0.00 0.00 0.00 4.18
98 99 1.742831 CGCAAGGGATTTTCAATCGGA 59.257 47.619 0.00 0.00 0.00 4.55
99 100 1.742831 TCGCAAGGGATTTTCAATCGG 59.257 47.619 0.00 0.00 38.47 4.18
100 101 3.065233 TCATCGCAAGGGATTTTCAATCG 59.935 43.478 0.00 0.00 38.47 3.34
101 102 4.336433 TCTCATCGCAAGGGATTTTCAATC 59.664 41.667 0.00 0.00 38.47 2.67
102 103 4.272489 TCTCATCGCAAGGGATTTTCAAT 58.728 39.130 0.00 0.00 38.47 2.57
103 104 3.684908 TCTCATCGCAAGGGATTTTCAA 58.315 40.909 0.00 0.00 38.47 2.69
104 105 3.348647 TCTCATCGCAAGGGATTTTCA 57.651 42.857 0.00 0.00 38.47 2.69
105 106 4.133078 AGATCTCATCGCAAGGGATTTTC 58.867 43.478 0.00 0.00 38.47 2.29
106 107 4.162040 AGATCTCATCGCAAGGGATTTT 57.838 40.909 0.00 0.00 38.47 1.82
107 108 3.853355 AGATCTCATCGCAAGGGATTT 57.147 42.857 0.00 0.00 38.47 2.17
108 109 3.737850 GAAGATCTCATCGCAAGGGATT 58.262 45.455 0.00 0.00 38.47 3.01
109 110 2.288702 CGAAGATCTCATCGCAAGGGAT 60.289 50.000 3.99 0.00 38.47 3.85
110 111 1.067669 CGAAGATCTCATCGCAAGGGA 59.932 52.381 3.99 0.00 38.47 4.20
111 112 1.067669 TCGAAGATCTCATCGCAAGGG 59.932 52.381 11.22 0.00 37.05 3.95
112 113 2.498807 TCGAAGATCTCATCGCAAGG 57.501 50.000 11.22 0.00 37.05 3.61
113 114 3.862267 AGTTTCGAAGATCTCATCGCAAG 59.138 43.478 11.22 0.00 37.05 4.01
114 115 3.849911 AGTTTCGAAGATCTCATCGCAA 58.150 40.909 11.22 5.09 37.05 4.85
115 116 3.510388 AGTTTCGAAGATCTCATCGCA 57.490 42.857 11.22 0.00 37.05 5.10
116 117 4.849883 TCTAGTTTCGAAGATCTCATCGC 58.150 43.478 11.22 0.00 37.05 4.58
168 169 5.471257 AGACACGGCAACTTTTAACAAAAA 58.529 33.333 0.00 0.00 0.00 1.94
169 170 5.061920 AGACACGGCAACTTTTAACAAAA 57.938 34.783 0.00 0.00 0.00 2.44
170 171 4.705337 AGACACGGCAACTTTTAACAAA 57.295 36.364 0.00 0.00 0.00 2.83
171 172 6.202937 CAATAGACACGGCAACTTTTAACAA 58.797 36.000 0.00 0.00 0.00 2.83
172 173 5.753744 CAATAGACACGGCAACTTTTAACA 58.246 37.500 0.00 0.00 0.00 2.41
173 174 4.615541 GCAATAGACACGGCAACTTTTAAC 59.384 41.667 0.00 0.00 0.00 2.01
174 175 4.276183 TGCAATAGACACGGCAACTTTTAA 59.724 37.500 0.00 0.00 32.54 1.52
175 176 3.815962 TGCAATAGACACGGCAACTTTTA 59.184 39.130 0.00 0.00 32.54 1.52
176 177 2.621055 TGCAATAGACACGGCAACTTTT 59.379 40.909 0.00 0.00 32.54 2.27
177 178 2.031157 GTGCAATAGACACGGCAACTTT 60.031 45.455 0.00 0.00 38.10 2.66
178 179 1.535462 GTGCAATAGACACGGCAACTT 59.465 47.619 0.00 0.00 38.10 2.66
179 180 1.156736 GTGCAATAGACACGGCAACT 58.843 50.000 0.00 0.00 38.10 3.16
180 181 0.871722 TGTGCAATAGACACGGCAAC 59.128 50.000 0.00 0.00 41.03 4.17
181 182 1.468127 CATGTGCAATAGACACGGCAA 59.532 47.619 0.00 0.00 41.03 4.52
182 183 1.085893 CATGTGCAATAGACACGGCA 58.914 50.000 0.00 0.00 41.03 5.69
183 184 1.368641 TCATGTGCAATAGACACGGC 58.631 50.000 0.00 0.00 41.03 5.68
184 185 4.345288 CAATTCATGTGCAATAGACACGG 58.655 43.478 0.00 0.00 41.03 4.94
185 186 3.787634 GCAATTCATGTGCAATAGACACG 59.212 43.478 2.12 0.00 41.80 4.49
186 187 4.107622 GGCAATTCATGTGCAATAGACAC 58.892 43.478 8.81 0.00 44.07 3.67
187 188 3.762823 TGGCAATTCATGTGCAATAGACA 59.237 39.130 8.81 0.00 44.07 3.41
188 189 4.374843 TGGCAATTCATGTGCAATAGAC 57.625 40.909 8.81 0.00 44.07 2.59
189 190 5.601583 AATGGCAATTCATGTGCAATAGA 57.398 34.783 8.81 0.00 44.07 1.98
190 191 9.647797 AATATAATGGCAATTCATGTGCAATAG 57.352 29.630 8.81 0.00 44.07 1.73
191 192 9.999660 AAATATAATGGCAATTCATGTGCAATA 57.000 25.926 8.81 2.42 44.07 1.90
192 193 8.911918 AAATATAATGGCAATTCATGTGCAAT 57.088 26.923 8.81 0.38 44.07 3.56
193 194 9.258826 GTAAATATAATGGCAATTCATGTGCAA 57.741 29.630 8.81 0.00 44.07 4.08
194 195 8.419442 TGTAAATATAATGGCAATTCATGTGCA 58.581 29.630 8.81 0.00 44.07 4.57
195 196 8.702438 GTGTAAATATAATGGCAATTCATGTGC 58.298 33.333 0.00 0.00 41.45 4.57
196 197 9.970395 AGTGTAAATATAATGGCAATTCATGTG 57.030 29.630 0.00 0.00 0.00 3.21
197 198 9.970395 CAGTGTAAATATAATGGCAATTCATGT 57.030 29.630 0.00 0.00 0.00 3.21
204 205 7.973388 GCAACTTCAGTGTAAATATAATGGCAA 59.027 33.333 0.00 0.00 0.00 4.52
205 206 7.416213 GGCAACTTCAGTGTAAATATAATGGCA 60.416 37.037 0.00 0.00 0.00 4.92
206 207 6.918022 GGCAACTTCAGTGTAAATATAATGGC 59.082 38.462 0.00 0.00 0.00 4.40
207 208 7.995289 TGGCAACTTCAGTGTAAATATAATGG 58.005 34.615 0.00 0.00 37.61 3.16
208 209 9.454585 CATGGCAACTTCAGTGTAAATATAATG 57.545 33.333 0.00 0.00 37.61 1.90
209 210 9.407380 TCATGGCAACTTCAGTGTAAATATAAT 57.593 29.630 0.00 0.00 37.61 1.28
210 211 8.800370 TCATGGCAACTTCAGTGTAAATATAA 57.200 30.769 0.00 0.00 37.61 0.98
211 212 8.978874 ATCATGGCAACTTCAGTGTAAATATA 57.021 30.769 0.00 0.00 37.61 0.86
212 213 7.886629 ATCATGGCAACTTCAGTGTAAATAT 57.113 32.000 0.00 0.00 37.61 1.28
213 214 8.839343 CATATCATGGCAACTTCAGTGTAAATA 58.161 33.333 0.00 0.00 37.61 1.40
214 215 7.340232 ACATATCATGGCAACTTCAGTGTAAAT 59.660 33.333 0.00 0.00 37.61 1.40
215 216 6.658816 ACATATCATGGCAACTTCAGTGTAAA 59.341 34.615 0.00 0.00 37.61 2.01
216 217 6.179756 ACATATCATGGCAACTTCAGTGTAA 58.820 36.000 0.00 0.00 37.61 2.41
217 218 5.744171 ACATATCATGGCAACTTCAGTGTA 58.256 37.500 0.00 0.00 37.61 2.90
218 219 4.592942 ACATATCATGGCAACTTCAGTGT 58.407 39.130 0.00 0.00 37.61 3.55
219 220 5.571784 AACATATCATGGCAACTTCAGTG 57.428 39.130 0.00 0.00 37.61 3.66
220 221 5.711506 TGAAACATATCATGGCAACTTCAGT 59.288 36.000 0.00 0.00 37.61 3.41
221 222 6.198650 TGAAACATATCATGGCAACTTCAG 57.801 37.500 0.00 0.00 37.61 3.02
222 223 6.604396 AGATGAAACATATCATGGCAACTTCA 59.396 34.615 0.00 0.00 40.08 3.02
223 224 7.035840 AGATGAAACATATCATGGCAACTTC 57.964 36.000 0.00 0.00 40.08 3.01
224 225 8.701908 ATAGATGAAACATATCATGGCAACTT 57.298 30.769 0.00 0.00 40.08 2.66
225 226 8.701908 AATAGATGAAACATATCATGGCAACT 57.298 30.769 0.00 0.00 40.08 3.16
226 227 9.754382 AAAATAGATGAAACATATCATGGCAAC 57.246 29.630 0.00 0.00 40.08 4.17
285 286 9.170734 GTCTAGTTTCTTAATTCCCCGTTTTAT 57.829 33.333 0.00 0.00 0.00 1.40
286 287 8.377799 AGTCTAGTTTCTTAATTCCCCGTTTTA 58.622 33.333 0.00 0.00 0.00 1.52
287 288 7.229308 AGTCTAGTTTCTTAATTCCCCGTTTT 58.771 34.615 0.00 0.00 0.00 2.43
288 289 6.776744 AGTCTAGTTTCTTAATTCCCCGTTT 58.223 36.000 0.00 0.00 0.00 3.60
289 290 6.370186 AGTCTAGTTTCTTAATTCCCCGTT 57.630 37.500 0.00 0.00 0.00 4.44
290 291 6.171213 CAAGTCTAGTTTCTTAATTCCCCGT 58.829 40.000 0.00 0.00 0.00 5.28
291 292 6.171213 ACAAGTCTAGTTTCTTAATTCCCCG 58.829 40.000 0.00 0.00 0.00 5.73
292 293 7.166167 TGACAAGTCTAGTTTCTTAATTCCCC 58.834 38.462 1.53 0.00 0.00 4.81
293 294 8.669243 CATGACAAGTCTAGTTTCTTAATTCCC 58.331 37.037 1.53 0.00 0.00 3.97
294 295 8.178313 GCATGACAAGTCTAGTTTCTTAATTCC 58.822 37.037 0.00 0.00 0.00 3.01
295 296 8.721478 TGCATGACAAGTCTAGTTTCTTAATTC 58.279 33.333 0.00 0.00 0.00 2.17
296 297 8.507249 GTGCATGACAAGTCTAGTTTCTTAATT 58.493 33.333 0.00 0.00 0.00 1.40
297 298 7.119846 GGTGCATGACAAGTCTAGTTTCTTAAT 59.880 37.037 0.00 0.00 0.00 1.40
298 299 6.426937 GGTGCATGACAAGTCTAGTTTCTTAA 59.573 38.462 0.00 0.00 0.00 1.85
299 300 5.932303 GGTGCATGACAAGTCTAGTTTCTTA 59.068 40.000 0.00 0.00 0.00 2.10
300 301 4.757149 GGTGCATGACAAGTCTAGTTTCTT 59.243 41.667 0.00 0.00 0.00 2.52
301 302 4.202357 TGGTGCATGACAAGTCTAGTTTCT 60.202 41.667 0.00 0.00 0.00 2.52
302 303 4.065088 TGGTGCATGACAAGTCTAGTTTC 58.935 43.478 0.00 0.00 0.00 2.78
303 304 4.085357 TGGTGCATGACAAGTCTAGTTT 57.915 40.909 0.00 0.00 0.00 2.66
304 305 3.769739 TGGTGCATGACAAGTCTAGTT 57.230 42.857 0.00 0.00 0.00 2.24
305 306 3.988976 ATGGTGCATGACAAGTCTAGT 57.011 42.857 0.00 0.00 0.00 2.57
306 307 5.877012 AGTTTATGGTGCATGACAAGTCTAG 59.123 40.000 0.00 0.00 0.00 2.43
307 308 5.804639 AGTTTATGGTGCATGACAAGTCTA 58.195 37.500 0.00 0.00 0.00 2.59
308 309 4.655963 AGTTTATGGTGCATGACAAGTCT 58.344 39.130 0.00 0.00 0.00 3.24
309 310 6.494893 TTAGTTTATGGTGCATGACAAGTC 57.505 37.500 0.00 0.00 0.00 3.01
310 311 6.892658 TTTAGTTTATGGTGCATGACAAGT 57.107 33.333 0.00 0.00 0.00 3.16
311 312 8.649841 CAATTTTAGTTTATGGTGCATGACAAG 58.350 33.333 0.00 0.00 0.00 3.16
312 313 7.117523 GCAATTTTAGTTTATGGTGCATGACAA 59.882 33.333 0.00 0.00 0.00 3.18
313 314 6.589523 GCAATTTTAGTTTATGGTGCATGACA 59.410 34.615 0.00 0.00 0.00 3.58
314 315 6.035975 GGCAATTTTAGTTTATGGTGCATGAC 59.964 38.462 0.00 0.00 32.41 3.06
315 316 6.105333 GGCAATTTTAGTTTATGGTGCATGA 58.895 36.000 0.00 0.00 32.41 3.07
316 317 5.873712 TGGCAATTTTAGTTTATGGTGCATG 59.126 36.000 0.00 0.00 32.41 4.06
317 318 6.047511 TGGCAATTTTAGTTTATGGTGCAT 57.952 33.333 0.00 0.00 32.41 3.96
318 319 5.474578 TGGCAATTTTAGTTTATGGTGCA 57.525 34.783 0.00 0.00 32.41 4.57
319 320 6.105333 TCATGGCAATTTTAGTTTATGGTGC 58.895 36.000 0.00 0.00 0.00 5.01
320 321 9.248291 GTATCATGGCAATTTTAGTTTATGGTG 57.752 33.333 0.00 0.00 0.00 4.17
321 322 8.976353 TGTATCATGGCAATTTTAGTTTATGGT 58.024 29.630 0.00 0.00 0.00 3.55
322 323 9.985730 ATGTATCATGGCAATTTTAGTTTATGG 57.014 29.630 0.00 0.00 0.00 2.74
324 325 9.480053 GCATGTATCATGGCAATTTTAGTTTAT 57.520 29.630 10.96 0.00 0.00 1.40
325 326 8.473219 TGCATGTATCATGGCAATTTTAGTTTA 58.527 29.630 10.96 0.00 32.54 2.01
326 327 7.278424 GTGCATGTATCATGGCAATTTTAGTTT 59.722 33.333 10.96 0.00 38.10 2.66
327 328 6.757947 GTGCATGTATCATGGCAATTTTAGTT 59.242 34.615 10.96 0.00 38.10 2.24
328 329 6.097270 AGTGCATGTATCATGGCAATTTTAGT 59.903 34.615 10.96 0.00 38.10 2.24
329 330 6.509656 AGTGCATGTATCATGGCAATTTTAG 58.490 36.000 10.96 0.00 38.10 1.85
330 331 6.468333 AGTGCATGTATCATGGCAATTTTA 57.532 33.333 10.96 0.00 38.10 1.52
331 332 5.347620 AGTGCATGTATCATGGCAATTTT 57.652 34.783 10.96 0.00 38.10 1.82
332 333 5.347620 AAGTGCATGTATCATGGCAATTT 57.652 34.783 10.96 5.95 41.10 1.82
333 334 6.468333 TTAAGTGCATGTATCATGGCAATT 57.532 33.333 16.52 16.52 45.12 2.32
334 335 6.468333 TTTAAGTGCATGTATCATGGCAAT 57.532 33.333 10.96 6.58 38.10 3.56
335 336 5.911378 TTTAAGTGCATGTATCATGGCAA 57.089 34.783 10.96 0.00 38.10 4.52
336 337 5.911378 TTTTAAGTGCATGTATCATGGCA 57.089 34.783 10.96 0.00 0.00 4.92
381 382 9.927668 CCAGTACTTTGACCATGAAAATATTTT 57.072 29.630 13.24 13.24 0.00 1.82
382 383 9.308000 TCCAGTACTTTGACCATGAAAATATTT 57.692 29.630 0.00 0.00 0.00 1.40
383 384 8.877864 TCCAGTACTTTGACCATGAAAATATT 57.122 30.769 0.00 0.00 0.00 1.28
384 385 8.109634 ACTCCAGTACTTTGACCATGAAAATAT 58.890 33.333 0.00 0.00 0.00 1.28
385 386 7.458397 ACTCCAGTACTTTGACCATGAAAATA 58.542 34.615 0.00 0.00 0.00 1.40
386 387 6.306987 ACTCCAGTACTTTGACCATGAAAAT 58.693 36.000 0.00 0.00 0.00 1.82
387 388 5.690865 ACTCCAGTACTTTGACCATGAAAA 58.309 37.500 0.00 0.00 0.00 2.29
388 389 5.304686 ACTCCAGTACTTTGACCATGAAA 57.695 39.130 0.00 0.00 0.00 2.69
389 390 4.974645 ACTCCAGTACTTTGACCATGAA 57.025 40.909 0.00 0.00 0.00 2.57
390 391 4.641396 CAACTCCAGTACTTTGACCATGA 58.359 43.478 0.00 0.00 0.00 3.07
391 392 3.189287 GCAACTCCAGTACTTTGACCATG 59.811 47.826 8.83 0.00 0.00 3.66
392 393 3.412386 GCAACTCCAGTACTTTGACCAT 58.588 45.455 8.83 0.00 0.00 3.55
393 394 2.486548 GGCAACTCCAGTACTTTGACCA 60.487 50.000 8.83 0.00 34.01 4.02
394 395 2.152016 GGCAACTCCAGTACTTTGACC 58.848 52.381 8.83 6.13 34.01 4.02
395 396 2.846193 TGGCAACTCCAGTACTTTGAC 58.154 47.619 8.83 6.57 40.72 3.18
414 415 5.009631 TCAAAACTAGACCCCATGTTGATG 58.990 41.667 0.00 0.00 0.00 3.07
415 416 5.255397 TCAAAACTAGACCCCATGTTGAT 57.745 39.130 0.00 0.00 0.00 2.57
416 417 4.715534 TCAAAACTAGACCCCATGTTGA 57.284 40.909 0.00 0.00 0.00 3.18
417 418 5.070001 TCTTCAAAACTAGACCCCATGTTG 58.930 41.667 0.00 0.00 0.00 3.33
418 419 5.319043 TCTTCAAAACTAGACCCCATGTT 57.681 39.130 0.00 0.00 0.00 2.71
419 420 4.993705 TCTTCAAAACTAGACCCCATGT 57.006 40.909 0.00 0.00 0.00 3.21
420 421 5.749462 AGATCTTCAAAACTAGACCCCATG 58.251 41.667 0.00 0.00 0.00 3.66
421 422 5.395768 CGAGATCTTCAAAACTAGACCCCAT 60.396 44.000 0.00 0.00 0.00 4.00
422 423 4.081642 CGAGATCTTCAAAACTAGACCCCA 60.082 45.833 0.00 0.00 0.00 4.96
423 424 4.081586 ACGAGATCTTCAAAACTAGACCCC 60.082 45.833 0.00 0.00 0.00 4.95
424 425 5.074584 ACGAGATCTTCAAAACTAGACCC 57.925 43.478 0.00 0.00 0.00 4.46
425 426 4.794246 CGACGAGATCTTCAAAACTAGACC 59.206 45.833 0.00 0.00 0.00 3.85
426 427 5.629097 TCGACGAGATCTTCAAAACTAGAC 58.371 41.667 0.00 0.00 0.00 2.59
427 428 5.642491 TCTCGACGAGATCTTCAAAACTAGA 59.358 40.000 23.27 0.00 33.35 2.43
428 429 5.735427 GTCTCGACGAGATCTTCAAAACTAG 59.265 44.000 28.81 0.00 40.98 2.57
429 430 5.629097 GTCTCGACGAGATCTTCAAAACTA 58.371 41.667 28.81 0.33 40.98 2.24
430 431 4.477780 GTCTCGACGAGATCTTCAAAACT 58.522 43.478 28.81 0.00 40.98 2.66
431 432 4.809455 GTCTCGACGAGATCTTCAAAAC 57.191 45.455 28.81 10.84 40.98 2.43
445 446 6.583912 TTTCATCATTAAATCCGTCTCGAC 57.416 37.500 0.00 0.00 0.00 4.20
446 447 7.603963 TTTTTCATCATTAAATCCGTCTCGA 57.396 32.000 0.00 0.00 0.00 4.04
493 494 9.233649 TCGGCTTAAAAATGTTTTATCTCCTAA 57.766 29.630 0.00 0.00 0.00 2.69
494 495 8.795842 TCGGCTTAAAAATGTTTTATCTCCTA 57.204 30.769 0.00 0.00 0.00 2.94
495 496 7.696992 TCGGCTTAAAAATGTTTTATCTCCT 57.303 32.000 0.00 0.00 0.00 3.69
496 497 8.751302 TTTCGGCTTAAAAATGTTTTATCTCC 57.249 30.769 0.00 0.00 0.00 3.71
498 499 8.984764 GGTTTTCGGCTTAAAAATGTTTTATCT 58.015 29.630 0.00 0.00 30.53 1.98
499 500 8.766151 TGGTTTTCGGCTTAAAAATGTTTTATC 58.234 29.630 0.00 0.00 30.53 1.75
500 501 8.664211 TGGTTTTCGGCTTAAAAATGTTTTAT 57.336 26.923 0.00 0.00 30.53 1.40
501 502 8.488651 TTGGTTTTCGGCTTAAAAATGTTTTA 57.511 26.923 0.00 0.00 30.53 1.52
502 503 6.986904 TGGTTTTCGGCTTAAAAATGTTTT 57.013 29.167 0.00 0.00 30.53 2.43
503 504 6.986904 TTGGTTTTCGGCTTAAAAATGTTT 57.013 29.167 0.00 0.00 30.53 2.83
504 505 6.986904 TTTGGTTTTCGGCTTAAAAATGTT 57.013 29.167 0.00 0.00 30.53 2.71
505 506 6.986904 TTTTGGTTTTCGGCTTAAAAATGT 57.013 29.167 0.00 0.00 30.53 2.71
528 529 6.208007 TGAACAGATCACATCAGCAGATTTTT 59.792 34.615 0.00 0.00 31.50 1.94
529 530 5.708697 TGAACAGATCACATCAGCAGATTTT 59.291 36.000 0.00 0.00 31.50 1.82
530 531 5.250982 TGAACAGATCACATCAGCAGATTT 58.749 37.500 0.00 0.00 31.50 2.17
531 532 4.840271 TGAACAGATCACATCAGCAGATT 58.160 39.130 0.00 0.00 31.50 2.40
532 533 4.482952 TGAACAGATCACATCAGCAGAT 57.517 40.909 0.00 0.00 31.50 2.90
533 534 3.967332 TGAACAGATCACATCAGCAGA 57.033 42.857 0.00 0.00 31.50 4.26
534 535 4.208666 CGTATGAACAGATCACATCAGCAG 59.791 45.833 0.00 0.00 41.93 4.24
535 536 4.114794 CGTATGAACAGATCACATCAGCA 58.885 43.478 0.00 0.00 41.93 4.41
536 537 4.026228 CACGTATGAACAGATCACATCAGC 60.026 45.833 0.00 0.00 41.93 4.26
537 538 4.505556 CCACGTATGAACAGATCACATCAG 59.494 45.833 0.00 0.00 41.93 2.90
538 539 4.432712 CCACGTATGAACAGATCACATCA 58.567 43.478 0.00 0.00 41.93 3.07
539 540 3.804325 CCCACGTATGAACAGATCACATC 59.196 47.826 0.00 0.00 41.93 3.06
540 541 3.450817 TCCCACGTATGAACAGATCACAT 59.549 43.478 0.00 0.00 41.93 3.21
541 542 2.829120 TCCCACGTATGAACAGATCACA 59.171 45.455 0.00 0.00 41.93 3.58
542 543 3.520290 TCCCACGTATGAACAGATCAC 57.480 47.619 0.00 0.00 41.93 3.06
543 544 4.545208 TTTCCCACGTATGAACAGATCA 57.455 40.909 0.00 0.00 43.67 2.92
544 545 5.584649 TCATTTTCCCACGTATGAACAGATC 59.415 40.000 0.00 0.00 0.00 2.75
545 546 5.496556 TCATTTTCCCACGTATGAACAGAT 58.503 37.500 0.00 0.00 0.00 2.90
546 547 4.900684 TCATTTTCCCACGTATGAACAGA 58.099 39.130 0.00 0.00 0.00 3.41
547 548 4.695455 ACTCATTTTCCCACGTATGAACAG 59.305 41.667 0.00 0.00 0.00 3.16
548 549 4.454161 CACTCATTTTCCCACGTATGAACA 59.546 41.667 0.00 0.00 0.00 3.18
549 550 4.142687 CCACTCATTTTCCCACGTATGAAC 60.143 45.833 0.00 0.00 0.00 3.18
550 551 4.006989 CCACTCATTTTCCCACGTATGAA 58.993 43.478 0.00 0.00 0.00 2.57
551 552 3.008594 ACCACTCATTTTCCCACGTATGA 59.991 43.478 0.00 0.00 0.00 2.15
552 553 3.126858 CACCACTCATTTTCCCACGTATG 59.873 47.826 0.00 0.00 0.00 2.39
553 554 3.008594 TCACCACTCATTTTCCCACGTAT 59.991 43.478 0.00 0.00 0.00 3.06
554 555 2.369203 TCACCACTCATTTTCCCACGTA 59.631 45.455 0.00 0.00 0.00 3.57
555 556 1.142060 TCACCACTCATTTTCCCACGT 59.858 47.619 0.00 0.00 0.00 4.49
556 557 1.890876 TCACCACTCATTTTCCCACG 58.109 50.000 0.00 0.00 0.00 4.94
557 558 2.493278 CCATCACCACTCATTTTCCCAC 59.507 50.000 0.00 0.00 0.00 4.61
558 559 2.378208 TCCATCACCACTCATTTTCCCA 59.622 45.455 0.00 0.00 0.00 4.37
559 560 3.019564 CTCCATCACCACTCATTTTCCC 58.980 50.000 0.00 0.00 0.00 3.97
560 561 3.691609 GTCTCCATCACCACTCATTTTCC 59.308 47.826 0.00 0.00 0.00 3.13
561 562 3.372206 CGTCTCCATCACCACTCATTTTC 59.628 47.826 0.00 0.00 0.00 2.29
562 563 3.244561 ACGTCTCCATCACCACTCATTTT 60.245 43.478 0.00 0.00 0.00 1.82
563 564 2.303022 ACGTCTCCATCACCACTCATTT 59.697 45.455 0.00 0.00 0.00 2.32
564 565 1.902508 ACGTCTCCATCACCACTCATT 59.097 47.619 0.00 0.00 0.00 2.57
565 566 1.205655 CACGTCTCCATCACCACTCAT 59.794 52.381 0.00 0.00 0.00 2.90
566 567 0.603065 CACGTCTCCATCACCACTCA 59.397 55.000 0.00 0.00 0.00 3.41
567 568 0.603569 ACACGTCTCCATCACCACTC 59.396 55.000 0.00 0.00 0.00 3.51
568 569 0.318441 CACACGTCTCCATCACCACT 59.682 55.000 0.00 0.00 0.00 4.00
569 570 0.670546 CCACACGTCTCCATCACCAC 60.671 60.000 0.00 0.00 0.00 4.16
570 571 1.671166 CCACACGTCTCCATCACCA 59.329 57.895 0.00 0.00 0.00 4.17
571 572 1.079127 CCCACACGTCTCCATCACC 60.079 63.158 0.00 0.00 0.00 4.02
572 573 1.741770 GCCCACACGTCTCCATCAC 60.742 63.158 0.00 0.00 0.00 3.06
573 574 2.662596 GCCCACACGTCTCCATCA 59.337 61.111 0.00 0.00 0.00 3.07
574 575 2.298158 ATCGCCCACACGTCTCCATC 62.298 60.000 0.00 0.00 0.00 3.51
575 576 2.359169 ATCGCCCACACGTCTCCAT 61.359 57.895 0.00 0.00 0.00 3.41
576 577 2.994995 ATCGCCCACACGTCTCCA 60.995 61.111 0.00 0.00 0.00 3.86
577 578 2.509336 CATCGCCCACACGTCTCC 60.509 66.667 0.00 0.00 0.00 3.71
578 579 2.094659 CACATCGCCCACACGTCTC 61.095 63.158 0.00 0.00 0.00 3.36
579 580 2.048222 CACATCGCCCACACGTCT 60.048 61.111 0.00 0.00 0.00 4.18
580 581 3.788766 GCACATCGCCCACACGTC 61.789 66.667 0.00 0.00 32.94 4.34
581 582 4.617520 TGCACATCGCCCACACGT 62.618 61.111 0.00 0.00 41.33 4.49
582 583 2.902419 TTTGCACATCGCCCACACG 61.902 57.895 0.00 0.00 41.33 4.49
583 584 1.371635 GTTTGCACATCGCCCACAC 60.372 57.895 0.00 0.00 41.33 3.82
584 585 2.902419 CGTTTGCACATCGCCCACA 61.902 57.895 0.00 0.00 41.33 4.17
585 586 2.126888 CGTTTGCACATCGCCCAC 60.127 61.111 0.00 0.00 41.33 4.61
586 587 4.036804 GCGTTTGCACATCGCCCA 62.037 61.111 15.37 0.00 43.41 5.36
595 596 3.882013 CACGTGTGGGCGTTTGCA 61.882 61.111 7.58 0.00 43.83 4.08
596 597 2.049475 TTACACGTGTGGGCGTTTGC 62.049 55.000 30.83 0.00 43.83 3.68
597 598 0.041663 CTTACACGTGTGGGCGTTTG 60.042 55.000 30.83 7.86 43.83 2.93
598 599 1.778027 GCTTACACGTGTGGGCGTTT 61.778 55.000 30.83 3.69 43.83 3.60
599 600 2.248835 GCTTACACGTGTGGGCGTT 61.249 57.895 30.83 4.50 43.83 4.84
600 601 2.663852 GCTTACACGTGTGGGCGT 60.664 61.111 30.83 5.31 46.88 5.68
601 602 3.773630 CGCTTACACGTGTGGGCG 61.774 66.667 35.77 35.77 41.05 6.13
602 603 1.740296 ATCGCTTACACGTGTGGGC 60.740 57.895 30.83 28.31 34.19 5.36
603 604 0.669318 ACATCGCTTACACGTGTGGG 60.669 55.000 30.83 21.83 34.19 4.61
604 605 0.438445 CACATCGCTTACACGTGTGG 59.562 55.000 30.83 22.33 39.33 4.17
605 606 0.179250 GCACATCGCTTACACGTGTG 60.179 55.000 30.83 16.29 42.53 3.82
606 607 0.598942 TGCACATCGCTTACACGTGT 60.599 50.000 26.52 26.52 43.06 4.49
607 608 0.510790 TTGCACATCGCTTACACGTG 59.489 50.000 15.48 15.48 43.06 4.49
608 609 1.222300 TTTGCACATCGCTTACACGT 58.778 45.000 0.00 0.00 43.06 4.49
609 610 2.168384 CATTTGCACATCGCTTACACG 58.832 47.619 0.00 0.00 43.06 4.49
610 611 1.913403 GCATTTGCACATCGCTTACAC 59.087 47.619 0.00 0.00 43.06 2.90
611 612 1.135431 GGCATTTGCACATCGCTTACA 60.135 47.619 4.74 0.00 44.36 2.41
612 613 1.548986 GGCATTTGCACATCGCTTAC 58.451 50.000 4.74 0.00 44.36 2.34
613 614 0.455410 GGGCATTTGCACATCGCTTA 59.545 50.000 4.74 0.00 45.57 3.09
614 615 1.216178 GGGCATTTGCACATCGCTT 59.784 52.632 4.74 0.00 45.57 4.68
615 616 2.887360 GGGCATTTGCACATCGCT 59.113 55.556 4.74 0.00 45.57 4.93
621 622 1.661197 CACGTGTGGGCATTTGCAC 60.661 57.895 7.58 0.57 46.69 4.57
622 623 2.124060 ACACGTGTGGGCATTTGCA 61.124 52.632 22.71 0.00 44.36 4.08
623 624 1.661197 CACACGTGTGGGCATTTGC 60.661 57.895 35.65 0.00 42.10 3.68
624 625 4.632037 CACACGTGTGGGCATTTG 57.368 55.556 35.65 12.14 42.10 2.32
636 637 1.334329 GGAAAAACTAACGCCCACACG 60.334 52.381 0.00 0.00 39.50 4.49
637 638 1.334329 CGGAAAAACTAACGCCCACAC 60.334 52.381 0.00 0.00 0.00 3.82
638 639 0.945813 CGGAAAAACTAACGCCCACA 59.054 50.000 0.00 0.00 0.00 4.17
639 640 0.946528 ACGGAAAAACTAACGCCCAC 59.053 50.000 0.00 0.00 0.00 4.61
640 641 1.334243 CAACGGAAAAACTAACGCCCA 59.666 47.619 0.00 0.00 0.00 5.36
641 642 1.603326 TCAACGGAAAAACTAACGCCC 59.397 47.619 0.00 0.00 0.00 6.13
642 643 3.337301 TTCAACGGAAAAACTAACGCC 57.663 42.857 0.00 0.00 0.00 5.68
643 644 5.876576 AAATTCAACGGAAAAACTAACGC 57.123 34.783 0.00 0.00 36.43 4.84
644 645 7.112426 CACCTAAATTCAACGGAAAAACTAACG 59.888 37.037 0.00 0.00 36.43 3.18
645 646 7.380333 CCACCTAAATTCAACGGAAAAACTAAC 59.620 37.037 0.00 0.00 36.43 2.34
646 647 7.427214 CCACCTAAATTCAACGGAAAAACTAA 58.573 34.615 0.00 0.00 36.43 2.24
647 648 6.016108 CCCACCTAAATTCAACGGAAAAACTA 60.016 38.462 0.00 0.00 36.43 2.24
648 649 5.221362 CCCACCTAAATTCAACGGAAAAACT 60.221 40.000 0.00 0.00 36.43 2.66
649 650 4.986034 CCCACCTAAATTCAACGGAAAAAC 59.014 41.667 0.00 0.00 36.43 2.43
650 651 4.894114 TCCCACCTAAATTCAACGGAAAAA 59.106 37.500 0.00 0.00 36.43 1.94
651 652 4.471548 TCCCACCTAAATTCAACGGAAAA 58.528 39.130 0.00 0.00 36.43 2.29
652 653 4.076394 CTCCCACCTAAATTCAACGGAAA 58.924 43.478 0.00 0.00 36.43 3.13
653 654 3.328343 TCTCCCACCTAAATTCAACGGAA 59.672 43.478 0.00 0.00 37.45 4.30
654 655 2.907696 TCTCCCACCTAAATTCAACGGA 59.092 45.455 0.00 0.00 0.00 4.69
655 656 3.055385 TCTCTCCCACCTAAATTCAACGG 60.055 47.826 0.00 0.00 0.00 4.44
656 657 4.081642 TCTCTCTCCCACCTAAATTCAACG 60.082 45.833 0.00 0.00 0.00 4.10
657 658 5.187967 TCTCTCTCTCCCACCTAAATTCAAC 59.812 44.000 0.00 0.00 0.00 3.18
712 713 7.719871 AATGCTACACCTACGGAGAATATAT 57.280 36.000 0.00 0.00 0.00 0.86
715 716 7.014905 ACAATAATGCTACACCTACGGAGAATA 59.985 37.037 0.00 0.00 0.00 1.75
722 723 8.609176 ACAAATAACAATAATGCTACACCTACG 58.391 33.333 0.00 0.00 0.00 3.51
757 758 5.874261 TGCTGTAATCATCGAAACATTCTCA 59.126 36.000 0.00 0.00 0.00 3.27
869 886 6.348213 CCATTACTGTACTGTTACACCTTTGC 60.348 42.308 10.89 0.00 34.36 3.68
906 941 2.405061 TACTGTTACACACGCGCCGT 62.405 55.000 5.73 0.00 42.36 5.68
913 948 3.562141 TGTGCCAATGTACTGTTACACAC 59.438 43.478 7.27 0.00 41.12 3.82
914 949 3.809905 TGTGCCAATGTACTGTTACACA 58.190 40.909 7.27 7.27 41.12 3.72
915 950 4.513692 TCTTGTGCCAATGTACTGTTACAC 59.486 41.667 0.00 0.00 41.12 2.90
916 951 4.513692 GTCTTGTGCCAATGTACTGTTACA 59.486 41.667 0.00 0.00 42.53 2.41
917 952 4.755123 AGTCTTGTGCCAATGTACTGTTAC 59.245 41.667 0.00 0.00 0.00 2.50
918 953 4.968259 AGTCTTGTGCCAATGTACTGTTA 58.032 39.130 0.00 0.00 0.00 2.41
919 954 3.815401 GAGTCTTGTGCCAATGTACTGTT 59.185 43.478 0.00 0.00 0.00 3.16
961 2514 1.336440 TGTTCCGTTGTTTCTGCATGG 59.664 47.619 0.00 0.00 0.00 3.66
976 2531 5.300792 TGACAGGGTGTTCTAATTTTGTTCC 59.699 40.000 0.00 0.00 0.00 3.62
996 2552 1.374631 GCTGAGCGTGGACATGACA 60.375 57.895 0.00 0.00 0.00 3.58
1064 2620 3.909258 TTCTTCTCGCGCGGTGTCC 62.909 63.158 31.69 0.00 0.00 4.02
1254 2810 0.877213 CGACGACCAGTTTCCGGTTT 60.877 55.000 0.00 0.00 36.69 3.27
1448 3007 6.616017 TCACGTGCAAATATGAAATGCTTAA 58.384 32.000 11.67 0.00 40.66 1.85
1451 3010 4.665212 CTCACGTGCAAATATGAAATGCT 58.335 39.130 11.67 0.00 40.66 3.79
1453 3012 4.263677 GTGCTCACGTGCAAATATGAAATG 59.736 41.667 11.67 0.00 45.12 2.32
1808 3415 2.921538 CTTTCTCGATCGCGGCGACT 62.922 60.000 28.88 16.53 39.18 4.18
1821 3428 0.391661 TGAGGCGGCATGACTTTCTC 60.392 55.000 13.08 1.05 34.35 2.87
2297 3913 1.006102 CCCGTCGCTGTTCTTGACT 60.006 57.895 0.00 0.00 0.00 3.41
2396 4012 6.097129 GCTAAACAGACCCAACTATACTCTCT 59.903 42.308 0.00 0.00 0.00 3.10
2399 4015 5.811100 GTGCTAAACAGACCCAACTATACTC 59.189 44.000 0.00 0.00 0.00 2.59
2414 4030 4.526650 TCACATCTAGGTCTGTGCTAAACA 59.473 41.667 13.10 0.00 41.96 2.83
2415 4031 4.865365 GTCACATCTAGGTCTGTGCTAAAC 59.135 45.833 13.10 5.87 41.96 2.01
2416 4032 4.526650 TGTCACATCTAGGTCTGTGCTAAA 59.473 41.667 13.10 0.00 41.96 1.85
2417 4033 4.086457 TGTCACATCTAGGTCTGTGCTAA 58.914 43.478 13.10 2.98 41.96 3.09
2418 4034 3.697166 TGTCACATCTAGGTCTGTGCTA 58.303 45.455 13.10 5.26 41.96 3.49
2419 4035 2.529632 TGTCACATCTAGGTCTGTGCT 58.470 47.619 13.10 0.00 41.96 4.40
2420 4036 3.533606 ATGTCACATCTAGGTCTGTGC 57.466 47.619 13.10 10.11 41.96 4.57
2421 4037 6.647334 AGATATGTCACATCTAGGTCTGTG 57.353 41.667 0.00 12.18 43.24 3.66
2422 4038 8.948401 ATTAGATATGTCACATCTAGGTCTGT 57.052 34.615 0.00 0.00 36.59 3.41
2475 4091 9.260002 GCAACAAGGAATAAAAAGAAATTGAGA 57.740 29.630 0.00 0.00 0.00 3.27
2476 4092 9.264719 AGCAACAAGGAATAAAAAGAAATTGAG 57.735 29.630 0.00 0.00 0.00 3.02
2479 4095 9.191995 CGTAGCAACAAGGAATAAAAAGAAATT 57.808 29.630 0.00 0.00 0.00 1.82
2480 4096 8.357402 ACGTAGCAACAAGGAATAAAAAGAAAT 58.643 29.630 0.00 0.00 0.00 2.17
2481 4097 7.708998 ACGTAGCAACAAGGAATAAAAAGAAA 58.291 30.769 0.00 0.00 0.00 2.52
2482 4098 7.266922 ACGTAGCAACAAGGAATAAAAAGAA 57.733 32.000 0.00 0.00 0.00 2.52
2483 4099 6.870971 ACGTAGCAACAAGGAATAAAAAGA 57.129 33.333 0.00 0.00 0.00 2.52
2484 4100 9.620660 AATAACGTAGCAACAAGGAATAAAAAG 57.379 29.630 0.00 0.00 0.00 2.27
2485 4101 9.968870 AAATAACGTAGCAACAAGGAATAAAAA 57.031 25.926 0.00 0.00 0.00 1.94
2486 4102 9.400638 CAAATAACGTAGCAACAAGGAATAAAA 57.599 29.630 0.00 0.00 0.00 1.52
2487 4103 7.539366 GCAAATAACGTAGCAACAAGGAATAAA 59.461 33.333 0.00 0.00 0.00 1.40
2488 4104 7.024768 GCAAATAACGTAGCAACAAGGAATAA 58.975 34.615 0.00 0.00 0.00 1.40
2489 4105 6.548171 GCAAATAACGTAGCAACAAGGAATA 58.452 36.000 0.00 0.00 0.00 1.75
2490 4106 5.399013 GCAAATAACGTAGCAACAAGGAAT 58.601 37.500 0.00 0.00 0.00 3.01
2491 4107 4.611807 CGCAAATAACGTAGCAACAAGGAA 60.612 41.667 0.00 0.00 0.00 3.36
2492 4108 3.120477 CGCAAATAACGTAGCAACAAGGA 60.120 43.478 0.00 0.00 0.00 3.36
2493 4109 3.160545 CGCAAATAACGTAGCAACAAGG 58.839 45.455 0.00 0.00 0.00 3.61
2494 4110 3.160545 CCGCAAATAACGTAGCAACAAG 58.839 45.455 0.00 0.00 0.00 3.16
2495 4111 2.095668 CCCGCAAATAACGTAGCAACAA 60.096 45.455 0.00 0.00 0.00 2.83
2496 4112 1.465387 CCCGCAAATAACGTAGCAACA 59.535 47.619 0.00 0.00 0.00 3.33
2497 4113 1.733360 TCCCGCAAATAACGTAGCAAC 59.267 47.619 0.00 0.00 0.00 4.17
2498 4114 2.004017 CTCCCGCAAATAACGTAGCAA 58.996 47.619 0.00 0.00 0.00 3.91
2499 4115 1.205179 TCTCCCGCAAATAACGTAGCA 59.795 47.619 0.00 0.00 0.00 3.49
2500 4116 1.930567 TCTCCCGCAAATAACGTAGC 58.069 50.000 0.00 0.00 0.00 3.58
2501 4117 5.526115 TCTAATCTCCCGCAAATAACGTAG 58.474 41.667 0.00 0.00 0.00 3.51
2502 4118 5.518848 TCTAATCTCCCGCAAATAACGTA 57.481 39.130 0.00 0.00 0.00 3.57
2503 4119 4.395959 TCTAATCTCCCGCAAATAACGT 57.604 40.909 0.00 0.00 0.00 3.99
2504 4120 4.750098 ACATCTAATCTCCCGCAAATAACG 59.250 41.667 0.00 0.00 0.00 3.18
2505 4121 5.758296 TCACATCTAATCTCCCGCAAATAAC 59.242 40.000 0.00 0.00 0.00 1.89
2506 4122 5.758296 GTCACATCTAATCTCCCGCAAATAA 59.242 40.000 0.00 0.00 0.00 1.40
2507 4123 5.163353 TGTCACATCTAATCTCCCGCAAATA 60.163 40.000 0.00 0.00 0.00 1.40
2508 4124 4.130118 GTCACATCTAATCTCCCGCAAAT 58.870 43.478 0.00 0.00 0.00 2.32
2509 4125 3.055458 TGTCACATCTAATCTCCCGCAAA 60.055 43.478 0.00 0.00 0.00 3.68
2510 4126 2.499693 TGTCACATCTAATCTCCCGCAA 59.500 45.455 0.00 0.00 0.00 4.85
2511 4127 2.107366 TGTCACATCTAATCTCCCGCA 58.893 47.619 0.00 0.00 0.00 5.69
2512 4128 2.890808 TGTCACATCTAATCTCCCGC 57.109 50.000 0.00 0.00 0.00 6.13
2513 4129 5.207110 AGAATGTCACATCTAATCTCCCG 57.793 43.478 0.00 0.00 0.00 5.14
2514 4130 7.957002 TCTAAGAATGTCACATCTAATCTCCC 58.043 38.462 0.00 0.00 0.00 4.30
2515 4131 9.823647 TTTCTAAGAATGTCACATCTAATCTCC 57.176 33.333 0.00 0.00 0.00 3.71
2559 4175 9.749340 AGGGCTGTTTAATACTATAGTTTGTTT 57.251 29.630 11.40 3.42 0.00 2.83
2569 4185 9.623000 GGAATTTTCTAGGGCTGTTTAATACTA 57.377 33.333 0.00 0.00 0.00 1.82
2570 4186 8.336987 AGGAATTTTCTAGGGCTGTTTAATACT 58.663 33.333 0.00 0.00 0.00 2.12
2571 4187 8.521170 AGGAATTTTCTAGGGCTGTTTAATAC 57.479 34.615 0.00 0.00 0.00 1.89
2573 4189 9.541884 TTTAGGAATTTTCTAGGGCTGTTTAAT 57.458 29.630 0.00 0.00 0.00 1.40
2599 4215 6.098266 ACAAGAAACCTGGCTTATTTTTCAGT 59.902 34.615 7.63 3.91 0.00 3.41
2630 4246 3.568853 TCCGGGCTTATTGTTTCGAAAAA 59.431 39.130 13.10 3.93 0.00 1.94
2643 4259 6.419791 TCTCTTTATTTTTCATCCGGGCTTA 58.580 36.000 0.00 0.00 0.00 3.09
2726 4342 5.163652 GGCTGTAAATGGATGGAAGTGTTAC 60.164 44.000 0.00 0.00 0.00 2.50
2746 4367 6.092748 GTGTCATTTAACACCATTAAGGCTG 58.907 40.000 0.00 0.00 43.01 4.85
2778 4399 3.928754 TCACATGAGGGGCTAATAGTCT 58.071 45.455 0.00 0.00 0.00 3.24
2779 4400 4.899352 ATCACATGAGGGGCTAATAGTC 57.101 45.455 0.00 0.00 0.00 2.59
2806 4427 4.203563 GCTAAATACACGTAAAATTGCGGC 59.796 41.667 8.43 0.00 40.65 6.53
2826 4447 3.329520 AGTGTTTGTTCCCTGTATGGCTA 59.670 43.478 0.00 0.00 0.00 3.93
2929 4550 1.407656 AACCTCGAGCCTGGTGTTCA 61.408 55.000 6.99 0.00 36.57 3.18
2970 4591 2.092267 TGCCTCAGTACATGCATCCAAT 60.092 45.455 0.00 0.00 0.00 3.16
2992 4613 4.444449 GCGGAATATACAGGGAAGGAAAGT 60.444 45.833 0.00 0.00 0.00 2.66
2993 4614 4.065789 GCGGAATATACAGGGAAGGAAAG 58.934 47.826 0.00 0.00 0.00 2.62
3043 4664 4.749245 CGCAAGTTTGTACCAAAGAGAT 57.251 40.909 0.00 0.00 0.00 2.75
3133 4755 0.712380 AAGACCCATTTGCCCCTCAT 59.288 50.000 0.00 0.00 0.00 2.90
3134 4756 0.486879 AAAGACCCATTTGCCCCTCA 59.513 50.000 0.00 0.00 0.00 3.86
3146 4768 5.710099 TGTCAAATGATACCTGAAAAGACCC 59.290 40.000 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.