Multiple sequence alignment - TraesCS2A01G470400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G470400 chr2A 100.000 3086 0 0 1 3086 713125784 713122699 0.000000e+00 5699
1 TraesCS2A01G470400 chr2A 89.344 1830 125 31 479 2261 713189307 713191113 0.000000e+00 2235
2 TraesCS2A01G470400 chr2D 93.779 2395 104 16 363 2734 574663463 574661091 0.000000e+00 3555
3 TraesCS2A01G470400 chr2D 93.177 1832 94 14 363 2175 575158768 575160587 0.000000e+00 2662
4 TraesCS2A01G470400 chr2D 87.282 1203 132 11 1278 2468 574600715 574601908 0.000000e+00 1354
5 TraesCS2A01G470400 chr2D 86.574 1229 144 11 1252 2468 574572064 574573283 0.000000e+00 1336
6 TraesCS2A01G470400 chr2D 88.532 933 88 9 1547 2468 574597057 574597981 0.000000e+00 1112
7 TraesCS2A01G470400 chr2D 93.678 174 8 3 2789 2960 574661028 574660856 1.100000e-64 257
8 TraesCS2A01G470400 chr2D 82.515 326 24 8 2668 2977 574977301 574977609 3.950000e-64 255
9 TraesCS2A01G470400 chr2D 89.381 113 12 0 2972 3084 6067536 6067648 3.210000e-30 143
10 TraesCS2A01G470400 chr2D 83.871 155 17 6 2022 2175 575167599 575167746 1.150000e-29 141
11 TraesCS2A01G470400 chr2B 92.328 2255 103 38 360 2592 690942621 690940415 0.000000e+00 3142
12 TraesCS2A01G470400 chr2B 91.507 1672 104 23 436 2088 691046891 691048543 0.000000e+00 2266
13 TraesCS2A01G470400 chr2B 86.187 1571 194 10 904 2460 691038172 691039733 0.000000e+00 1677
14 TraesCS2A01G470400 chr2B 92.105 152 9 2 2828 2977 690936304 690936154 8.670000e-51 211
15 TraesCS2A01G470400 chr2B 91.781 73 5 1 2663 2734 690940396 690940324 1.960000e-17 100
16 TraesCS2A01G470400 chr3B 77.441 297 44 8 487 765 543843771 543844062 4.120000e-34 156
17 TraesCS2A01G470400 chr7B 91.150 113 10 0 2972 3084 199999537 199999425 1.480000e-33 154
18 TraesCS2A01G470400 chr5D 91.150 113 9 1 2972 3084 302375486 302375597 5.330000e-33 152
19 TraesCS2A01G470400 chr7D 89.381 113 12 0 2972 3084 193414605 193414717 3.210000e-30 143
20 TraesCS2A01G470400 chr6B 89.474 114 10 2 2972 3084 100705133 100705021 3.210000e-30 143
21 TraesCS2A01G470400 chr6B 88.596 114 12 1 2972 3084 87689835 87689948 1.490000e-28 137
22 TraesCS2A01G470400 chr4B 89.381 113 12 0 2972 3084 339494803 339494691 3.210000e-30 143
23 TraesCS2A01G470400 chr3D 89.381 113 12 0 2972 3084 608746043 608745931 3.210000e-30 143
24 TraesCS2A01G470400 chr1A 89.381 113 12 0 2972 3084 533771087 533770975 3.210000e-30 143


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G470400 chr2A 713122699 713125784 3085 True 5699 5699 100.0000 1 3086 1 chr2A.!!$R1 3085
1 TraesCS2A01G470400 chr2A 713189307 713191113 1806 False 2235 2235 89.3440 479 2261 1 chr2A.!!$F1 1782
2 TraesCS2A01G470400 chr2D 575158768 575160587 1819 False 2662 2662 93.1770 363 2175 1 chr2D.!!$F4 1812
3 TraesCS2A01G470400 chr2D 574660856 574663463 2607 True 1906 3555 93.7285 363 2960 2 chr2D.!!$R1 2597
4 TraesCS2A01G470400 chr2D 574572064 574573283 1219 False 1336 1336 86.5740 1252 2468 1 chr2D.!!$F2 1216
5 TraesCS2A01G470400 chr2D 574597057 574601908 4851 False 1233 1354 87.9070 1278 2468 2 chr2D.!!$F6 1190
6 TraesCS2A01G470400 chr2B 691046891 691048543 1652 False 2266 2266 91.5070 436 2088 1 chr2B.!!$F2 1652
7 TraesCS2A01G470400 chr2B 691038172 691039733 1561 False 1677 1677 86.1870 904 2460 1 chr2B.!!$F1 1556
8 TraesCS2A01G470400 chr2B 690940324 690942621 2297 True 1621 3142 92.0545 360 2734 2 chr2B.!!$R2 2374

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
166 167 0.316689 CGCGTTCACTGGGAAAACAC 60.317 55.0 0.0 0.0 37.23 3.32 F
809 880 0.319469 GAAATGGTGGCGTGTTTGGG 60.319 55.0 0.0 0.0 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2076 4464 0.969409 ACGTACCAGACTAGCCACCC 60.969 60.0 0.0 0.0 0.0 4.61 R
2778 5206 0.036306 ACGGAAGAAAACGGGCAGAT 59.964 50.0 0.0 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 9.097257 GTCAATTTCAAAAGAATCTTGAACCAA 57.903 29.630 0.00 0.00 41.32 3.67
44 45 9.097257 TCAATTTCAAAAGAATCTTGAACCAAC 57.903 29.630 0.00 0.00 41.32 3.77
45 46 8.881743 CAATTTCAAAAGAATCTTGAACCAACA 58.118 29.630 0.00 0.00 41.32 3.33
65 66 8.383318 CCAACATATGGTTAGATGGTTAAGAG 57.617 38.462 7.80 0.00 44.85 2.85
67 68 7.931015 ACATATGGTTAGATGGTTAAGAGGA 57.069 36.000 7.80 0.00 29.82 3.71
68 69 7.736893 ACATATGGTTAGATGGTTAAGAGGAC 58.263 38.462 7.80 0.00 29.82 3.85
69 70 7.347222 ACATATGGTTAGATGGTTAAGAGGACA 59.653 37.037 7.80 0.00 29.82 4.02
70 71 5.677319 TGGTTAGATGGTTAAGAGGACAG 57.323 43.478 0.00 0.00 0.00 3.51
71 72 5.091552 TGGTTAGATGGTTAAGAGGACAGT 58.908 41.667 0.00 0.00 0.00 3.55
73 74 6.727231 TGGTTAGATGGTTAAGAGGACAGTAA 59.273 38.462 0.00 0.00 0.00 2.24
74 75 7.402071 TGGTTAGATGGTTAAGAGGACAGTAAT 59.598 37.037 0.00 0.00 0.00 1.89
75 76 8.921205 GGTTAGATGGTTAAGAGGACAGTAATA 58.079 37.037 0.00 0.00 0.00 0.98
79 80 8.652290 AGATGGTTAAGAGGACAGTAATATTCC 58.348 37.037 0.00 0.00 0.00 3.01
80 81 7.133133 TGGTTAAGAGGACAGTAATATTCCC 57.867 40.000 0.00 0.00 0.00 3.97
81 82 6.674861 TGGTTAAGAGGACAGTAATATTCCCA 59.325 38.462 0.00 0.00 0.00 4.37
82 83 7.147549 TGGTTAAGAGGACAGTAATATTCCCAG 60.148 40.741 0.00 0.00 0.00 4.45
83 84 4.965200 AGAGGACAGTAATATTCCCAGC 57.035 45.455 0.00 0.00 0.00 4.85
84 85 3.648545 AGAGGACAGTAATATTCCCAGCC 59.351 47.826 0.00 0.00 0.00 4.85
86 87 2.441750 GGACAGTAATATTCCCAGCCCA 59.558 50.000 0.00 0.00 0.00 5.36
87 88 3.477530 GACAGTAATATTCCCAGCCCAC 58.522 50.000 0.00 0.00 0.00 4.61
90 91 2.174854 AGTAATATTCCCAGCCCACCAC 59.825 50.000 0.00 0.00 0.00 4.16
96 97 4.263572 CCAGCCCACCACGGTTGA 62.264 66.667 0.00 0.00 36.27 3.18
97 98 2.203280 CAGCCCACCACGGTTGAA 60.203 61.111 0.00 0.00 36.27 2.69
99 100 2.203294 GCCCACCACGGTTGAAGT 60.203 61.111 0.00 0.00 0.00 3.01
100 101 2.258726 GCCCACCACGGTTGAAGTC 61.259 63.158 0.00 0.00 0.00 3.01
101 102 1.599797 CCCACCACGGTTGAAGTCC 60.600 63.158 0.00 0.00 0.00 3.85
103 104 0.682852 CCACCACGGTTGAAGTCCTA 59.317 55.000 0.00 0.00 0.00 2.94
104 105 1.071071 CCACCACGGTTGAAGTCCTAA 59.929 52.381 0.00 0.00 0.00 2.69
106 107 2.806244 CACCACGGTTGAAGTCCTAAAG 59.194 50.000 0.00 0.00 0.00 1.85
107 108 2.436911 ACCACGGTTGAAGTCCTAAAGT 59.563 45.455 0.00 0.00 0.00 2.66
108 109 3.118149 ACCACGGTTGAAGTCCTAAAGTT 60.118 43.478 0.00 0.00 0.00 2.66
109 110 4.101430 ACCACGGTTGAAGTCCTAAAGTTA 59.899 41.667 0.00 0.00 0.00 2.24
110 111 5.058490 CCACGGTTGAAGTCCTAAAGTTAA 58.942 41.667 0.00 0.00 0.00 2.01
111 112 5.049886 CCACGGTTGAAGTCCTAAAGTTAAC 60.050 44.000 0.00 0.00 0.00 2.01
113 114 6.204108 CACGGTTGAAGTCCTAAAGTTAACAT 59.796 38.462 8.61 0.00 0.00 2.71
114 115 6.769341 ACGGTTGAAGTCCTAAAGTTAACATT 59.231 34.615 8.61 4.73 0.00 2.71
115 116 7.075741 CGGTTGAAGTCCTAAAGTTAACATTG 58.924 38.462 8.61 0.00 0.00 2.82
116 117 7.041644 CGGTTGAAGTCCTAAAGTTAACATTGA 60.042 37.037 8.61 0.00 0.00 2.57
118 119 9.612620 GTTGAAGTCCTAAAGTTAACATTGATG 57.387 33.333 8.61 0.00 0.00 3.07
119 120 7.816640 TGAAGTCCTAAAGTTAACATTGATGC 58.183 34.615 8.61 0.00 0.00 3.91
120 121 7.665559 TGAAGTCCTAAAGTTAACATTGATGCT 59.334 33.333 8.61 0.00 0.00 3.79
121 122 8.409358 AAGTCCTAAAGTTAACATTGATGCTT 57.591 30.769 8.61 4.41 0.00 3.91
122 123 9.515226 AAGTCCTAAAGTTAACATTGATGCTTA 57.485 29.630 8.61 0.00 0.00 3.09
124 125 8.726988 GTCCTAAAGTTAACATTGATGCTTACA 58.273 33.333 8.61 0.00 0.00 2.41
125 126 9.461312 TCCTAAAGTTAACATTGATGCTTACAT 57.539 29.630 8.61 0.00 39.98 2.29
150 151 2.842208 TTGGATTTATTTCAGGCGCG 57.158 45.000 0.00 0.00 0.00 6.86
152 153 2.088423 TGGATTTATTTCAGGCGCGTT 58.912 42.857 8.43 0.00 0.00 4.84
153 154 2.096819 TGGATTTATTTCAGGCGCGTTC 59.903 45.455 8.43 0.00 0.00 3.95
155 156 2.604969 TTTATTTCAGGCGCGTTCAC 57.395 45.000 8.43 0.00 0.00 3.18
156 157 1.803334 TTATTTCAGGCGCGTTCACT 58.197 45.000 8.43 0.00 0.00 3.41
157 158 1.075542 TATTTCAGGCGCGTTCACTG 58.924 50.000 8.43 11.65 0.00 3.66
158 159 1.577328 ATTTCAGGCGCGTTCACTGG 61.577 55.000 8.43 0.00 33.19 4.00
161 162 3.936203 AGGCGCGTTCACTGGGAA 61.936 61.111 8.43 0.00 0.00 3.97
162 163 2.975799 GGCGCGTTCACTGGGAAA 60.976 61.111 8.43 0.00 37.23 3.13
166 167 0.316689 CGCGTTCACTGGGAAAACAC 60.317 55.000 0.00 0.00 37.23 3.32
167 168 0.316689 GCGTTCACTGGGAAAACACG 60.317 55.000 0.00 0.00 37.23 4.49
168 169 1.011333 CGTTCACTGGGAAAACACGT 58.989 50.000 0.00 0.00 37.23 4.49
169 170 1.399089 CGTTCACTGGGAAAACACGTT 59.601 47.619 0.00 0.00 37.23 3.99
170 171 2.159490 CGTTCACTGGGAAAACACGTTT 60.159 45.455 0.00 0.00 37.23 3.60
188 189 3.656559 GTTTCCGTAGACTACAAAGGCA 58.343 45.455 12.99 0.00 30.50 4.75
189 190 4.251268 GTTTCCGTAGACTACAAAGGCAT 58.749 43.478 12.99 0.00 30.50 4.40
190 191 3.795623 TCCGTAGACTACAAAGGCATC 57.204 47.619 12.99 0.00 30.50 3.91
192 193 3.130516 TCCGTAGACTACAAAGGCATCTG 59.869 47.826 12.99 0.00 30.50 2.90
194 195 3.859961 CGTAGACTACAAAGGCATCTGTG 59.140 47.826 12.99 0.00 34.41 3.66
195 196 4.380550 CGTAGACTACAAAGGCATCTGTGA 60.381 45.833 12.99 0.00 32.58 3.58
196 197 4.833478 AGACTACAAAGGCATCTGTGAT 57.167 40.909 0.00 0.00 32.58 3.06
197 198 4.511527 AGACTACAAAGGCATCTGTGATG 58.488 43.478 3.42 3.42 32.58 3.07
198 199 4.223700 AGACTACAAAGGCATCTGTGATGA 59.776 41.667 11.25 0.00 32.58 2.92
199 200 4.256920 ACTACAAAGGCATCTGTGATGAC 58.743 43.478 11.25 8.40 32.58 3.06
200 201 3.430042 ACAAAGGCATCTGTGATGACT 57.570 42.857 9.88 9.88 39.50 3.41
202 203 3.755378 ACAAAGGCATCTGTGATGACTTC 59.245 43.478 23.67 6.03 45.94 3.01
203 204 2.306341 AGGCATCTGTGATGACTTCG 57.694 50.000 9.88 0.00 32.45 3.79
205 206 1.929836 GGCATCTGTGATGACTTCGTC 59.070 52.381 11.25 0.00 0.00 4.20
206 207 2.610433 GCATCTGTGATGACTTCGTCA 58.390 47.619 11.25 0.00 46.90 4.35
210 211 4.257267 TCTGTGATGACTTCGTCAACAT 57.743 40.909 9.60 0.00 44.54 2.71
211 212 3.989817 TCTGTGATGACTTCGTCAACATG 59.010 43.478 9.60 0.00 44.54 3.21
212 213 3.988819 TGTGATGACTTCGTCAACATGA 58.011 40.909 9.60 0.00 44.54 3.07
213 214 3.989817 TGTGATGACTTCGTCAACATGAG 59.010 43.478 9.60 0.00 44.54 2.90
214 215 3.990469 GTGATGACTTCGTCAACATGAGT 59.010 43.478 9.60 0.00 44.54 3.41
215 216 3.989817 TGATGACTTCGTCAACATGAGTG 59.010 43.478 0.00 0.00 45.96 3.51
217 218 3.642705 TGACTTCGTCAACATGAGTGAG 58.357 45.455 0.00 0.00 39.78 3.51
218 219 3.068165 TGACTTCGTCAACATGAGTGAGT 59.932 43.478 0.00 0.00 39.78 3.41
219 220 3.384668 ACTTCGTCAACATGAGTGAGTG 58.615 45.455 0.00 0.00 0.00 3.51
222 223 4.783764 TCGTCAACATGAGTGAGTGTAT 57.216 40.909 0.00 0.00 0.00 2.29
223 224 4.485163 TCGTCAACATGAGTGAGTGTATG 58.515 43.478 0.00 0.00 0.00 2.39
224 225 4.022329 TCGTCAACATGAGTGAGTGTATGT 60.022 41.667 0.00 0.00 35.43 2.29
226 227 4.991056 GTCAACATGAGTGAGTGTATGTGT 59.009 41.667 0.00 0.00 34.28 3.72
227 228 4.990426 TCAACATGAGTGAGTGTATGTGTG 59.010 41.667 0.00 0.00 34.28 3.82
228 229 4.607293 ACATGAGTGAGTGTATGTGTGT 57.393 40.909 0.00 0.00 32.90 3.72
230 231 6.286240 ACATGAGTGAGTGTATGTGTGTAT 57.714 37.500 0.00 0.00 32.90 2.29
231 232 6.101997 ACATGAGTGAGTGTATGTGTGTATG 58.898 40.000 0.00 0.00 32.90 2.39
232 233 5.722021 TGAGTGAGTGTATGTGTGTATGT 57.278 39.130 0.00 0.00 0.00 2.29
233 234 5.469479 TGAGTGAGTGTATGTGTGTATGTG 58.531 41.667 0.00 0.00 0.00 3.21
235 236 5.853936 AGTGAGTGTATGTGTGTATGTGTT 58.146 37.500 0.00 0.00 0.00 3.32
236 237 5.696270 AGTGAGTGTATGTGTGTATGTGTTG 59.304 40.000 0.00 0.00 0.00 3.33
237 238 5.465390 GTGAGTGTATGTGTGTATGTGTTGT 59.535 40.000 0.00 0.00 0.00 3.32
239 240 7.330946 GTGAGTGTATGTGTGTATGTGTTGTAT 59.669 37.037 0.00 0.00 0.00 2.29
241 242 7.158697 AGTGTATGTGTGTATGTGTTGTATGT 58.841 34.615 0.00 0.00 0.00 2.29
242 243 7.117667 AGTGTATGTGTGTATGTGTTGTATGTG 59.882 37.037 0.00 0.00 0.00 3.21
243 244 4.740741 TGTGTGTATGTGTTGTATGTGC 57.259 40.909 0.00 0.00 0.00 4.57
244 245 4.130118 TGTGTGTATGTGTTGTATGTGCA 58.870 39.130 0.00 0.00 0.00 4.57
245 246 4.759183 TGTGTGTATGTGTTGTATGTGCAT 59.241 37.500 0.00 0.00 0.00 3.96
246 247 5.088068 GTGTGTATGTGTTGTATGTGCATG 58.912 41.667 0.00 0.00 0.00 4.06
250 251 3.534524 TGTGTTGTATGTGCATGAACG 57.465 42.857 0.00 0.00 0.00 3.95
251 252 2.241722 GTGTTGTATGTGCATGAACGC 58.758 47.619 0.00 0.00 0.00 4.84
252 253 1.198867 TGTTGTATGTGCATGAACGCC 59.801 47.619 0.00 0.00 0.00 5.68
253 254 1.468520 GTTGTATGTGCATGAACGCCT 59.531 47.619 0.00 0.00 0.00 5.52
254 255 1.819928 TGTATGTGCATGAACGCCTT 58.180 45.000 0.00 0.00 0.00 4.35
255 256 2.158559 TGTATGTGCATGAACGCCTTT 58.841 42.857 0.00 0.00 0.00 3.11
256 257 2.556189 TGTATGTGCATGAACGCCTTTT 59.444 40.909 0.00 0.00 0.00 2.27
257 258 2.818130 ATGTGCATGAACGCCTTTTT 57.182 40.000 0.00 0.00 0.00 1.94
281 282 8.487313 TTTTAGACAAGTATATGCATGAACGT 57.513 30.769 10.16 2.62 0.00 3.99
282 283 7.694388 TTAGACAAGTATATGCATGAACGTC 57.306 36.000 10.16 10.43 0.00 4.34
283 284 5.907207 AGACAAGTATATGCATGAACGTCT 58.093 37.500 10.16 12.29 0.00 4.18
284 285 5.750547 AGACAAGTATATGCATGAACGTCTG 59.249 40.000 10.16 9.66 0.00 3.51
296 297 4.628160 CGTCTGCGTGTGTACTGT 57.372 55.556 0.00 0.00 0.00 3.55
297 298 3.759550 CGTCTGCGTGTGTACTGTA 57.240 52.632 0.00 0.00 0.00 2.74
298 299 2.257974 CGTCTGCGTGTGTACTGTAT 57.742 50.000 0.00 0.00 0.00 2.29
300 301 2.984471 CGTCTGCGTGTGTACTGTATTT 59.016 45.455 0.00 0.00 0.00 1.40
301 302 3.427528 CGTCTGCGTGTGTACTGTATTTT 59.572 43.478 0.00 0.00 0.00 1.82
302 303 4.084745 CGTCTGCGTGTGTACTGTATTTTT 60.085 41.667 0.00 0.00 0.00 1.94
328 329 9.649316 TTTTCTAAAGGATCTTTTTAGGGAACA 57.351 29.630 20.32 8.69 38.22 3.18
329 330 9.649316 TTTCTAAAGGATCTTTTTAGGGAACAA 57.351 29.630 20.32 10.79 38.22 2.83
330 331 8.863872 TCTAAAGGATCTTTTTAGGGAACAAG 57.136 34.615 20.32 7.23 38.22 3.16
331 332 6.918067 AAAGGATCTTTTTAGGGAACAAGG 57.082 37.500 0.00 0.00 0.00 3.61
332 333 4.344978 AGGATCTTTTTAGGGAACAAGGC 58.655 43.478 0.00 0.00 0.00 4.35
334 335 3.895704 TCTTTTTAGGGAACAAGGCCT 57.104 42.857 0.00 0.00 0.00 5.19
335 336 4.193240 TCTTTTTAGGGAACAAGGCCTT 57.807 40.909 13.78 13.78 0.00 4.35
337 338 4.966168 TCTTTTTAGGGAACAAGGCCTTTT 59.034 37.500 17.61 13.68 0.00 2.27
338 339 5.427157 TCTTTTTAGGGAACAAGGCCTTTTT 59.573 36.000 17.61 17.15 0.00 1.94
427 440 3.130340 TCACTTTTCTTTGTCTTGCCCAC 59.870 43.478 0.00 0.00 0.00 4.61
429 442 1.028905 TTTCTTTGTCTTGCCCACCG 58.971 50.000 0.00 0.00 0.00 4.94
484 503 1.228521 TAGTCGACGGTCCCCAACA 60.229 57.895 10.46 0.00 0.00 3.33
566 588 2.343758 GTTGGACCTGCTCAGCGA 59.656 61.111 0.00 0.00 0.00 4.93
624 685 0.391597 TGCCCGTCGAGTCTTTTTCT 59.608 50.000 0.00 0.00 0.00 2.52
790 861 2.222729 GGTAAGCTGTTATGCGTCAACG 60.223 50.000 0.00 0.00 43.27 4.10
809 880 0.319469 GAAATGGTGGCGTGTTTGGG 60.319 55.000 0.00 0.00 0.00 4.12
854 925 3.228188 TCAAATCTGGGCTGTGTTTCT 57.772 42.857 0.00 0.00 0.00 2.52
855 926 3.565307 TCAAATCTGGGCTGTGTTTCTT 58.435 40.909 0.00 0.00 0.00 2.52
856 927 3.960102 TCAAATCTGGGCTGTGTTTCTTT 59.040 39.130 0.00 0.00 0.00 2.52
857 928 4.037923 TCAAATCTGGGCTGTGTTTCTTTC 59.962 41.667 0.00 0.00 0.00 2.62
902 973 3.668447 TGAAACCTGTTGATCTCTCAGC 58.332 45.455 0.00 0.00 33.55 4.26
1572 3954 2.204291 TGGAAGGATGGCCAGGGT 60.204 61.111 13.05 0.00 36.29 4.34
1785 4167 2.654749 TAGTCGATGAGCACCACAAG 57.345 50.000 0.00 0.00 0.00 3.16
1892 4274 0.867746 TTGTCTGAGTGCATTGACGC 59.132 50.000 0.00 0.00 32.64 5.19
2070 4458 3.650942 TGAAGGAGTTACTGGACATGGTT 59.349 43.478 0.00 0.00 0.00 3.67
2076 4464 0.616371 TACTGGACATGGTTTCCCGG 59.384 55.000 0.00 0.00 31.33 5.73
2088 4476 2.758852 TTTCCCGGGGTGGCTAGTCT 62.759 60.000 23.50 0.00 35.87 3.24
2180 4580 6.361748 GCTCGGTTTACCTATGACTTATTACG 59.638 42.308 0.00 0.00 0.00 3.18
2483 4906 4.463539 TCCTCGTGCTTTATAGTACAACCA 59.536 41.667 0.00 0.00 36.88 3.67
2555 4978 9.109533 GTAACCAATTTTACACGATTGTAGTTG 57.890 33.333 0.00 0.00 39.44 3.16
2588 5015 7.920738 AGTATGCCAAATAAAGAGAATTCGTC 58.079 34.615 0.00 0.00 0.00 4.20
2591 5018 6.411376 TGCCAAATAAAGAGAATTCGTCCTA 58.589 36.000 0.00 0.00 0.00 2.94
2592 5019 7.054124 TGCCAAATAAAGAGAATTCGTCCTAT 58.946 34.615 0.00 0.00 0.00 2.57
2593 5020 7.556275 TGCCAAATAAAGAGAATTCGTCCTATT 59.444 33.333 0.00 0.77 0.00 1.73
2594 5021 8.406297 GCCAAATAAAGAGAATTCGTCCTATTT 58.594 33.333 0.00 6.37 0.00 1.40
2601 5028 9.945904 AAAGAGAATTCGTCCTATTTTAAGAGT 57.054 29.630 0.00 0.00 0.00 3.24
2739 5167 8.971321 CATAGCATGCATCTACCAAATAAAAAC 58.029 33.333 21.98 0.00 0.00 2.43
2740 5168 7.174107 AGCATGCATCTACCAAATAAAAACT 57.826 32.000 21.98 0.00 0.00 2.66
2741 5169 7.037438 AGCATGCATCTACCAAATAAAAACTG 58.963 34.615 21.98 0.00 0.00 3.16
2742 5170 7.035004 GCATGCATCTACCAAATAAAAACTGA 58.965 34.615 14.21 0.00 0.00 3.41
2745 5173 8.347004 TGCATCTACCAAATAAAAACTGATGA 57.653 30.769 0.00 0.00 32.95 2.92
2746 5174 8.461222 TGCATCTACCAAATAAAAACTGATGAG 58.539 33.333 0.00 0.00 32.95 2.90
2753 5181 7.177392 ACCAAATAAAAACTGATGAGAGAAGGG 59.823 37.037 0.00 0.00 0.00 3.95
2755 5183 2.797177 AAACTGATGAGAGAAGGGGC 57.203 50.000 0.00 0.00 0.00 5.80
2756 5184 0.539051 AACTGATGAGAGAAGGGGCG 59.461 55.000 0.00 0.00 0.00 6.13
2757 5185 0.616111 ACTGATGAGAGAAGGGGCGT 60.616 55.000 0.00 0.00 0.00 5.68
2759 5187 0.984230 TGATGAGAGAAGGGGCGTTT 59.016 50.000 0.00 0.00 0.00 3.60
2761 5189 0.678048 ATGAGAGAAGGGGCGTTTGC 60.678 55.000 0.00 0.00 41.71 3.68
2772 5200 3.516578 GCGTTTGCCTACTCTCACT 57.483 52.632 0.00 0.00 33.98 3.41
2774 5202 2.260481 GCGTTTGCCTACTCTCACTAC 58.740 52.381 0.00 0.00 33.98 2.73
2775 5203 2.094649 GCGTTTGCCTACTCTCACTACT 60.095 50.000 0.00 0.00 33.98 2.57
2776 5204 3.502920 CGTTTGCCTACTCTCACTACTG 58.497 50.000 0.00 0.00 0.00 2.74
2778 5206 4.321008 CGTTTGCCTACTCTCACTACTGAA 60.321 45.833 0.00 0.00 0.00 3.02
2779 5207 5.622460 CGTTTGCCTACTCTCACTACTGAAT 60.622 44.000 0.00 0.00 0.00 2.57
2780 5208 5.584253 TTGCCTACTCTCACTACTGAATC 57.416 43.478 0.00 0.00 0.00 2.52
2781 5209 4.861196 TGCCTACTCTCACTACTGAATCT 58.139 43.478 0.00 0.00 0.00 2.40
2783 5211 4.499019 GCCTACTCTCACTACTGAATCTGC 60.499 50.000 0.00 0.00 0.00 4.26
2784 5212 4.037446 CCTACTCTCACTACTGAATCTGCC 59.963 50.000 0.00 0.00 0.00 4.85
2785 5213 2.763448 ACTCTCACTACTGAATCTGCCC 59.237 50.000 0.00 0.00 0.00 5.36
2795 5232 2.159382 TGAATCTGCCCGTTTTCTTCC 58.841 47.619 0.00 0.00 0.00 3.46
2796 5233 1.130561 GAATCTGCCCGTTTTCTTCCG 59.869 52.381 0.00 0.00 0.00 4.30
2806 5243 4.261280 CCCGTTTTCTTCCGTAATTGTTGT 60.261 41.667 0.00 0.00 0.00 3.32
2840 5277 5.930569 CCAAGGTGTGTAGTAGGTAAGTTTC 59.069 44.000 0.00 0.00 0.00 2.78
2945 5384 0.179076 TACACATGCATCCTCCTGCG 60.179 55.000 0.00 0.00 45.30 5.18
2951 5390 0.462581 TGCATCCTCCTGCGTGATTC 60.463 55.000 0.00 0.00 45.30 2.52
2952 5391 0.462581 GCATCCTCCTGCGTGATTCA 60.463 55.000 0.00 0.00 31.49 2.57
2960 5399 4.082571 CCTCCTGCGTGATTCAAGAAAAAT 60.083 41.667 3.64 0.00 0.00 1.82
2961 5400 5.123820 CCTCCTGCGTGATTCAAGAAAAATA 59.876 40.000 3.64 0.00 0.00 1.40
2962 5401 6.182039 TCCTGCGTGATTCAAGAAAAATAG 57.818 37.500 3.64 0.00 0.00 1.73
2963 5402 5.705441 TCCTGCGTGATTCAAGAAAAATAGT 59.295 36.000 3.64 0.00 0.00 2.12
2964 5403 6.876789 TCCTGCGTGATTCAAGAAAAATAGTA 59.123 34.615 3.64 0.00 0.00 1.82
2965 5404 7.389330 TCCTGCGTGATTCAAGAAAAATAGTAA 59.611 33.333 3.64 0.00 0.00 2.24
2966 5405 8.020819 CCTGCGTGATTCAAGAAAAATAGTAAA 58.979 33.333 3.64 0.00 0.00 2.01
2967 5406 9.393249 CTGCGTGATTCAAGAAAAATAGTAAAA 57.607 29.630 3.64 0.00 0.00 1.52
2968 5407 9.737427 TGCGTGATTCAAGAAAAATAGTAAAAA 57.263 25.926 3.64 0.00 0.00 1.94
2987 5426 6.951256 AAAAATCTTTTTCGAAGCATAGGC 57.049 33.333 0.00 0.00 35.61 3.93
2988 5427 5.643379 AAATCTTTTTCGAAGCATAGGCA 57.357 34.783 0.67 0.00 44.61 4.75
2989 5428 5.643379 AATCTTTTTCGAAGCATAGGCAA 57.357 34.783 0.67 0.00 44.61 4.52
2990 5429 5.643379 ATCTTTTTCGAAGCATAGGCAAA 57.357 34.783 0.67 0.00 44.61 3.68
2991 5430 5.446143 TCTTTTTCGAAGCATAGGCAAAA 57.554 34.783 0.67 0.00 44.61 2.44
2992 5431 5.460646 TCTTTTTCGAAGCATAGGCAAAAG 58.539 37.500 12.88 12.88 44.61 2.27
2993 5432 5.240623 TCTTTTTCGAAGCATAGGCAAAAGA 59.759 36.000 16.07 16.07 41.13 2.52
2994 5433 5.643379 TTTTCGAAGCATAGGCAAAAGAT 57.357 34.783 0.67 0.00 44.61 2.40
2995 5434 5.643379 TTTCGAAGCATAGGCAAAAGATT 57.357 34.783 0.67 0.00 44.61 2.40
2996 5435 5.643379 TTCGAAGCATAGGCAAAAGATTT 57.357 34.783 0.67 0.00 44.61 2.17
2997 5436 4.985413 TCGAAGCATAGGCAAAAGATTTG 58.015 39.130 0.67 0.00 44.61 2.32
2998 5437 3.549070 CGAAGCATAGGCAAAAGATTTGC 59.451 43.478 17.18 17.18 44.61 3.68
3006 5445 1.922545 GCAAAAGATTTGCCTCATCGC 59.077 47.619 15.12 0.00 39.38 4.58
3007 5446 2.416431 GCAAAAGATTTGCCTCATCGCT 60.416 45.455 15.12 0.00 39.38 4.93
3008 5447 3.841643 CAAAAGATTTGCCTCATCGCTT 58.158 40.909 0.00 0.00 0.00 4.68
3009 5448 4.675146 GCAAAAGATTTGCCTCATCGCTTA 60.675 41.667 15.12 0.00 39.38 3.09
3010 5449 5.401550 CAAAAGATTTGCCTCATCGCTTAA 58.598 37.500 0.00 0.00 0.00 1.85
3011 5450 5.841957 AAAGATTTGCCTCATCGCTTAAT 57.158 34.783 0.00 0.00 0.00 1.40
3012 5451 5.841957 AAGATTTGCCTCATCGCTTAATT 57.158 34.783 0.00 0.00 0.00 1.40
3013 5452 6.942532 AAGATTTGCCTCATCGCTTAATTA 57.057 33.333 0.00 0.00 0.00 1.40
3014 5453 6.942532 AGATTTGCCTCATCGCTTAATTAA 57.057 33.333 0.00 0.00 0.00 1.40
3015 5454 6.963796 AGATTTGCCTCATCGCTTAATTAAG 58.036 36.000 19.08 19.08 36.40 1.85
3031 5470 5.588958 AATTAAGCAGAAGAGAATTGCCC 57.411 39.130 0.00 0.00 38.58 5.36
3032 5471 2.592102 AAGCAGAAGAGAATTGCCCA 57.408 45.000 0.00 0.00 38.58 5.36
3033 5472 2.125773 AGCAGAAGAGAATTGCCCAG 57.874 50.000 0.00 0.00 38.58 4.45
3034 5473 1.353694 AGCAGAAGAGAATTGCCCAGT 59.646 47.619 0.00 0.00 38.58 4.00
3035 5474 2.165998 GCAGAAGAGAATTGCCCAGTT 58.834 47.619 0.00 0.00 31.79 3.16
3036 5475 2.094854 GCAGAAGAGAATTGCCCAGTTG 60.095 50.000 0.00 0.00 31.79 3.16
3037 5476 3.415212 CAGAAGAGAATTGCCCAGTTGA 58.585 45.455 0.00 0.00 0.00 3.18
3038 5477 4.015084 CAGAAGAGAATTGCCCAGTTGAT 58.985 43.478 0.00 0.00 0.00 2.57
3039 5478 4.461781 CAGAAGAGAATTGCCCAGTTGATT 59.538 41.667 0.00 0.00 0.00 2.57
3040 5479 5.649395 CAGAAGAGAATTGCCCAGTTGATTA 59.351 40.000 0.00 0.00 0.00 1.75
3041 5480 6.151648 CAGAAGAGAATTGCCCAGTTGATTAA 59.848 38.462 0.00 0.00 0.00 1.40
3042 5481 5.904362 AGAGAATTGCCCAGTTGATTAAC 57.096 39.130 0.00 0.00 37.06 2.01
3043 5482 4.396166 AGAGAATTGCCCAGTTGATTAACG 59.604 41.667 0.00 0.00 41.71 3.18
3044 5483 3.443681 AGAATTGCCCAGTTGATTAACGG 59.556 43.478 0.00 0.25 41.71 4.44
3045 5484 2.570415 TTGCCCAGTTGATTAACGGA 57.430 45.000 11.10 0.00 41.71 4.69
3046 5485 2.570415 TGCCCAGTTGATTAACGGAA 57.430 45.000 11.10 0.00 41.71 4.30
3047 5486 2.865079 TGCCCAGTTGATTAACGGAAA 58.135 42.857 11.10 0.02 41.71 3.13
3048 5487 3.223435 TGCCCAGTTGATTAACGGAAAA 58.777 40.909 11.10 0.00 41.71 2.29
3049 5488 3.004944 TGCCCAGTTGATTAACGGAAAAC 59.995 43.478 11.10 0.00 41.71 2.43
3050 5489 3.613193 GCCCAGTTGATTAACGGAAAACC 60.613 47.826 11.10 0.00 41.71 3.27
3051 5490 3.365565 CCCAGTTGATTAACGGAAAACCG 60.366 47.826 7.12 7.12 41.71 4.44
3052 5491 3.365565 CCAGTTGATTAACGGAAAACCGG 60.366 47.826 13.05 0.00 41.71 5.28
3053 5492 2.815503 AGTTGATTAACGGAAAACCGGG 59.184 45.455 6.32 0.00 41.71 5.73
3054 5493 1.166989 TGATTAACGGAAAACCGGGC 58.833 50.000 6.32 0.00 37.53 6.13
3055 5494 1.166989 GATTAACGGAAAACCGGGCA 58.833 50.000 6.32 0.00 37.53 5.36
3056 5495 1.540707 GATTAACGGAAAACCGGGCAA 59.459 47.619 6.32 4.40 37.53 4.52
3057 5496 1.396653 TTAACGGAAAACCGGGCAAA 58.603 45.000 6.32 0.00 37.53 3.68
3058 5497 1.396653 TAACGGAAAACCGGGCAAAA 58.603 45.000 6.32 0.00 37.53 2.44
3059 5498 0.535797 AACGGAAAACCGGGCAAAAA 59.464 45.000 6.32 0.00 37.53 1.94
3082 5521 3.363341 GGTACAAACCAACCACATGTG 57.637 47.619 19.31 19.31 45.98 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.965824 GGTTCAAGATTCTTTTGAAATTGACTA 57.034 29.630 0.00 0.00 43.76 2.59
17 18 8.647143 TGGTTCAAGATTCTTTTGAAATTGAC 57.353 30.769 0.00 0.00 43.76 3.18
18 19 9.097257 GTTGGTTCAAGATTCTTTTGAAATTGA 57.903 29.630 0.00 0.00 43.76 2.57
19 20 8.881743 TGTTGGTTCAAGATTCTTTTGAAATTG 58.118 29.630 0.00 0.00 43.76 2.32
20 21 9.617523 ATGTTGGTTCAAGATTCTTTTGAAATT 57.382 25.926 0.00 0.00 43.76 1.82
23 24 9.695526 CATATGTTGGTTCAAGATTCTTTTGAA 57.304 29.630 0.00 0.00 41.00 2.69
24 25 8.306038 CCATATGTTGGTTCAAGATTCTTTTGA 58.694 33.333 1.24 0.00 40.99 2.69
25 26 8.470040 CCATATGTTGGTTCAAGATTCTTTTG 57.530 34.615 1.24 0.00 40.99 2.44
43 44 7.347222 TGTCCTCTTAACCATCTAACCATATGT 59.653 37.037 1.24 0.00 0.00 2.29
44 45 7.735917 TGTCCTCTTAACCATCTAACCATATG 58.264 38.462 0.00 0.00 0.00 1.78
45 46 7.569111 ACTGTCCTCTTAACCATCTAACCATAT 59.431 37.037 0.00 0.00 0.00 1.78
47 48 5.726793 ACTGTCCTCTTAACCATCTAACCAT 59.273 40.000 0.00 0.00 0.00 3.55
48 49 5.091552 ACTGTCCTCTTAACCATCTAACCA 58.908 41.667 0.00 0.00 0.00 3.67
53 54 8.652290 GGAATATTACTGTCCTCTTAACCATCT 58.348 37.037 0.00 0.00 0.00 2.90
54 55 7.878644 GGGAATATTACTGTCCTCTTAACCATC 59.121 40.741 0.00 0.00 0.00 3.51
56 57 6.674861 TGGGAATATTACTGTCCTCTTAACCA 59.325 38.462 0.00 0.00 0.00 3.67
57 58 7.133133 TGGGAATATTACTGTCCTCTTAACC 57.867 40.000 0.00 0.00 0.00 2.85
58 59 6.706716 GCTGGGAATATTACTGTCCTCTTAAC 59.293 42.308 0.00 0.00 0.00 2.01
59 60 6.183361 GGCTGGGAATATTACTGTCCTCTTAA 60.183 42.308 0.00 0.00 0.00 1.85
61 62 4.103311 GGCTGGGAATATTACTGTCCTCTT 59.897 45.833 0.00 0.00 0.00 2.85
62 63 3.648545 GGCTGGGAATATTACTGTCCTCT 59.351 47.826 0.00 0.00 0.00 3.69
63 64 3.244596 GGGCTGGGAATATTACTGTCCTC 60.245 52.174 10.87 0.00 0.00 3.71
65 66 2.441750 TGGGCTGGGAATATTACTGTCC 59.558 50.000 11.10 11.10 0.00 4.02
67 68 2.174854 GGTGGGCTGGGAATATTACTGT 59.825 50.000 0.00 0.00 0.00 3.55
68 69 2.174639 TGGTGGGCTGGGAATATTACTG 59.825 50.000 0.00 0.00 0.00 2.74
69 70 2.174854 GTGGTGGGCTGGGAATATTACT 59.825 50.000 0.00 0.00 0.00 2.24
70 71 2.583143 GTGGTGGGCTGGGAATATTAC 58.417 52.381 0.00 0.00 0.00 1.89
71 72 1.142060 CGTGGTGGGCTGGGAATATTA 59.858 52.381 0.00 0.00 0.00 0.98
73 74 1.531748 CGTGGTGGGCTGGGAATAT 59.468 57.895 0.00 0.00 0.00 1.28
74 75 2.675242 CCGTGGTGGGCTGGGAATA 61.675 63.158 0.00 0.00 0.00 1.75
75 76 4.047125 CCGTGGTGGGCTGGGAAT 62.047 66.667 0.00 0.00 0.00 3.01
79 80 3.783362 TTCAACCGTGGTGGGCTGG 62.783 63.158 0.00 0.00 44.64 4.85
80 81 2.203280 TTCAACCGTGGTGGGCTG 60.203 61.111 0.00 0.00 44.64 4.85
81 82 2.113139 CTTCAACCGTGGTGGGCT 59.887 61.111 0.00 0.00 44.64 5.19
82 83 2.203294 ACTTCAACCGTGGTGGGC 60.203 61.111 0.00 0.00 44.64 5.36
83 84 1.599797 GGACTTCAACCGTGGTGGG 60.600 63.158 0.00 0.00 44.64 4.61
84 85 0.682852 TAGGACTTCAACCGTGGTGG 59.317 55.000 0.00 0.00 46.41 4.61
86 87 2.436911 ACTTTAGGACTTCAACCGTGGT 59.563 45.455 0.00 0.00 0.00 4.16
87 88 3.121738 ACTTTAGGACTTCAACCGTGG 57.878 47.619 0.00 0.00 0.00 4.94
90 91 6.796705 ATGTTAACTTTAGGACTTCAACCG 57.203 37.500 7.22 0.00 0.00 4.44
95 96 8.045176 AGCATCAATGTTAACTTTAGGACTTC 57.955 34.615 7.22 0.00 0.00 3.01
96 97 8.409358 AAGCATCAATGTTAACTTTAGGACTT 57.591 30.769 7.22 6.56 0.00 3.01
97 98 8.947115 GTAAGCATCAATGTTAACTTTAGGACT 58.053 33.333 7.22 1.15 0.00 3.85
99 100 8.856153 TGTAAGCATCAATGTTAACTTTAGGA 57.144 30.769 7.22 2.39 0.00 2.94
128 129 3.923461 CGCGCCTGAAATAAATCCAAAAA 59.077 39.130 0.00 0.00 0.00 1.94
129 130 3.057174 ACGCGCCTGAAATAAATCCAAAA 60.057 39.130 5.73 0.00 0.00 2.44
130 131 2.490115 ACGCGCCTGAAATAAATCCAAA 59.510 40.909 5.73 0.00 0.00 3.28
131 132 2.088423 ACGCGCCTGAAATAAATCCAA 58.912 42.857 5.73 0.00 0.00 3.53
132 133 1.745232 ACGCGCCTGAAATAAATCCA 58.255 45.000 5.73 0.00 0.00 3.41
133 134 2.096819 TGAACGCGCCTGAAATAAATCC 59.903 45.455 5.73 0.00 0.00 3.01
136 137 2.095969 CAGTGAACGCGCCTGAAATAAA 60.096 45.455 5.73 0.00 0.00 1.40
137 138 1.463056 CAGTGAACGCGCCTGAAATAA 59.537 47.619 5.73 0.00 0.00 1.40
138 139 1.075542 CAGTGAACGCGCCTGAAATA 58.924 50.000 5.73 0.00 0.00 1.40
140 141 2.250939 CCAGTGAACGCGCCTGAAA 61.251 57.895 5.73 0.00 0.00 2.69
141 142 2.664851 CCAGTGAACGCGCCTGAA 60.665 61.111 5.73 0.00 0.00 3.02
142 143 4.680237 CCCAGTGAACGCGCCTGA 62.680 66.667 5.73 0.00 0.00 3.86
143 144 4.680237 TCCCAGTGAACGCGCCTG 62.680 66.667 5.73 7.39 0.00 4.85
144 145 2.951475 TTTTCCCAGTGAACGCGCCT 62.951 55.000 5.73 0.00 31.05 5.52
145 146 2.548295 TTTTCCCAGTGAACGCGCC 61.548 57.895 5.73 0.00 31.05 6.53
147 148 0.316689 GTGTTTTCCCAGTGAACGCG 60.317 55.000 3.53 3.53 31.05 6.01
150 151 3.431856 GAAACGTGTTTTCCCAGTGAAC 58.568 45.455 0.00 0.00 38.16 3.18
167 168 3.656559 TGCCTTTGTAGTCTACGGAAAC 58.343 45.455 5.55 0.00 0.00 2.78
168 169 4.222145 AGATGCCTTTGTAGTCTACGGAAA 59.778 41.667 5.55 1.25 0.00 3.13
169 170 3.767673 AGATGCCTTTGTAGTCTACGGAA 59.232 43.478 5.55 2.67 0.00 4.30
170 171 3.130516 CAGATGCCTTTGTAGTCTACGGA 59.869 47.826 5.55 0.00 0.00 4.69
173 174 5.073311 TCACAGATGCCTTTGTAGTCTAC 57.927 43.478 2.81 2.81 0.00 2.59
174 175 5.422012 TCATCACAGATGCCTTTGTAGTCTA 59.578 40.000 2.19 0.00 0.00 2.59
176 177 4.331168 GTCATCACAGATGCCTTTGTAGTC 59.669 45.833 2.19 0.00 0.00 2.59
178 179 4.511527 AGTCATCACAGATGCCTTTGTAG 58.488 43.478 2.19 0.00 0.00 2.74
179 180 4.558226 AGTCATCACAGATGCCTTTGTA 57.442 40.909 2.19 0.00 0.00 2.41
180 181 3.430042 AGTCATCACAGATGCCTTTGT 57.570 42.857 2.19 0.00 0.00 2.83
181 182 3.181513 CGAAGTCATCACAGATGCCTTTG 60.182 47.826 4.98 4.61 0.00 2.77
182 183 3.005554 CGAAGTCATCACAGATGCCTTT 58.994 45.455 4.98 0.00 0.00 3.11
183 184 2.027745 ACGAAGTCATCACAGATGCCTT 60.028 45.455 3.26 3.26 29.74 4.35
199 200 3.384668 ACACTCACTCATGTTGACGAAG 58.615 45.455 0.00 0.00 0.00 3.79
200 201 3.452755 ACACTCACTCATGTTGACGAA 57.547 42.857 0.00 0.00 0.00 3.85
201 202 4.022329 ACATACACTCACTCATGTTGACGA 60.022 41.667 0.00 0.00 0.00 4.20
202 203 4.090498 CACATACACTCACTCATGTTGACG 59.910 45.833 0.00 0.00 29.31 4.35
203 204 4.991056 ACACATACACTCACTCATGTTGAC 59.009 41.667 0.00 0.00 29.31 3.18
205 206 4.751600 ACACACATACACTCACTCATGTTG 59.248 41.667 0.00 0.00 29.31 3.33
206 207 4.960938 ACACACATACACTCACTCATGTT 58.039 39.130 0.00 0.00 29.31 2.71
210 211 5.010617 ACACATACACACATACACTCACTCA 59.989 40.000 0.00 0.00 0.00 3.41
211 212 5.470368 ACACATACACACATACACTCACTC 58.530 41.667 0.00 0.00 0.00 3.51
212 213 5.468540 ACACATACACACATACACTCACT 57.531 39.130 0.00 0.00 0.00 3.41
213 214 5.465390 ACAACACATACACACATACACTCAC 59.535 40.000 0.00 0.00 0.00 3.51
214 215 5.606505 ACAACACATACACACATACACTCA 58.393 37.500 0.00 0.00 0.00 3.41
215 216 7.330946 ACATACAACACATACACACATACACTC 59.669 37.037 0.00 0.00 0.00 3.51
217 218 7.233689 CACATACAACACATACACACATACAC 58.766 38.462 0.00 0.00 0.00 2.90
218 219 6.128418 GCACATACAACACATACACACATACA 60.128 38.462 0.00 0.00 0.00 2.29
219 220 6.128418 TGCACATACAACACATACACACATAC 60.128 38.462 0.00 0.00 0.00 2.39
222 223 4.130118 TGCACATACAACACATACACACA 58.870 39.130 0.00 0.00 0.00 3.72
223 224 4.740741 TGCACATACAACACATACACAC 57.259 40.909 0.00 0.00 0.00 3.82
224 225 4.999950 TCATGCACATACAACACATACACA 59.000 37.500 0.00 0.00 0.00 3.72
226 227 5.390356 CGTTCATGCACATACAACACATACA 60.390 40.000 0.00 0.00 0.00 2.29
227 228 5.021389 CGTTCATGCACATACAACACATAC 58.979 41.667 0.00 0.00 0.00 2.39
228 229 4.436718 GCGTTCATGCACATACAACACATA 60.437 41.667 0.00 0.00 34.15 2.29
230 231 2.350293 GCGTTCATGCACATACAACACA 60.350 45.455 0.00 0.00 34.15 3.72
231 232 2.241722 GCGTTCATGCACATACAACAC 58.758 47.619 0.00 0.00 34.15 3.32
232 233 1.198867 GGCGTTCATGCACATACAACA 59.801 47.619 0.00 0.00 36.28 3.33
233 234 1.468520 AGGCGTTCATGCACATACAAC 59.531 47.619 0.00 0.00 36.28 3.32
235 236 1.819928 AAGGCGTTCATGCACATACA 58.180 45.000 0.00 0.00 36.28 2.29
236 237 2.919666 AAAGGCGTTCATGCACATAC 57.080 45.000 0.00 0.00 36.28 2.39
237 238 3.932545 AAAAAGGCGTTCATGCACATA 57.067 38.095 0.00 0.00 36.28 2.29
255 256 8.941977 ACGTTCATGCATATACTTGTCTAAAAA 58.058 29.630 0.00 0.00 0.00 1.94
256 257 8.487313 ACGTTCATGCATATACTTGTCTAAAA 57.513 30.769 0.00 0.00 0.00 1.52
257 258 7.979537 AGACGTTCATGCATATACTTGTCTAAA 59.020 33.333 13.50 0.00 31.72 1.85
258 259 7.435192 CAGACGTTCATGCATATACTTGTCTAA 59.565 37.037 14.28 0.00 32.21 2.10
260 261 5.750547 CAGACGTTCATGCATATACTTGTCT 59.249 40.000 0.00 5.81 33.57 3.41
261 262 5.557136 GCAGACGTTCATGCATATACTTGTC 60.557 44.000 14.23 3.48 42.11 3.18
263 264 4.606894 CGCAGACGTTCATGCATATACTTG 60.607 45.833 17.75 1.34 42.68 3.16
264 265 3.490896 CGCAGACGTTCATGCATATACTT 59.509 43.478 17.75 0.00 42.68 2.24
266 267 3.424430 CGCAGACGTTCATGCATATAC 57.576 47.619 17.75 0.00 42.68 1.47
280 281 4.985044 AAAATACAGTACACACGCAGAC 57.015 40.909 0.00 0.00 0.00 3.51
302 303 9.649316 TGTTCCCTAAAAAGATCCTTTAGAAAA 57.351 29.630 19.49 12.89 38.21 2.29
303 304 9.649316 TTGTTCCCTAAAAAGATCCTTTAGAAA 57.351 29.630 19.49 13.12 38.21 2.52
305 306 7.888546 CCTTGTTCCCTAAAAAGATCCTTTAGA 59.111 37.037 19.49 5.25 38.21 2.10
306 307 7.363007 GCCTTGTTCCCTAAAAAGATCCTTTAG 60.363 40.741 14.11 14.11 36.52 1.85
307 308 6.436218 GCCTTGTTCCCTAAAAAGATCCTTTA 59.564 38.462 0.00 0.00 0.00 1.85
308 309 5.246203 GCCTTGTTCCCTAAAAAGATCCTTT 59.754 40.000 0.00 0.00 0.00 3.11
309 310 4.772624 GCCTTGTTCCCTAAAAAGATCCTT 59.227 41.667 0.00 0.00 0.00 3.36
310 311 4.344978 GCCTTGTTCCCTAAAAAGATCCT 58.655 43.478 0.00 0.00 0.00 3.24
312 313 4.344978 AGGCCTTGTTCCCTAAAAAGATC 58.655 43.478 0.00 0.00 0.00 2.75
313 314 4.404185 AGGCCTTGTTCCCTAAAAAGAT 57.596 40.909 0.00 0.00 0.00 2.40
314 315 3.895704 AGGCCTTGTTCCCTAAAAAGA 57.104 42.857 0.00 0.00 0.00 2.52
315 316 4.955811 AAAGGCCTTGTTCCCTAAAAAG 57.044 40.909 21.33 0.00 0.00 2.27
316 317 5.702065 AAAAAGGCCTTGTTCCCTAAAAA 57.298 34.783 21.33 0.00 0.00 1.94
337 338 7.308049 GGCTTGCGGAAAAATTATTACCAAAAA 60.308 33.333 0.00 0.00 0.00 1.94
338 339 6.147985 GGCTTGCGGAAAAATTATTACCAAAA 59.852 34.615 0.00 0.00 0.00 2.44
339 340 5.639931 GGCTTGCGGAAAAATTATTACCAAA 59.360 36.000 0.00 0.00 0.00 3.28
343 344 4.749976 TGGGCTTGCGGAAAAATTATTAC 58.250 39.130 0.00 0.00 0.00 1.89
344 345 5.606348 ATGGGCTTGCGGAAAAATTATTA 57.394 34.783 0.00 0.00 0.00 0.98
345 346 3.971245 TGGGCTTGCGGAAAAATTATT 57.029 38.095 0.00 0.00 0.00 1.40
346 347 4.441792 GAATGGGCTTGCGGAAAAATTAT 58.558 39.130 0.00 0.00 0.00 1.28
347 348 3.674682 CGAATGGGCTTGCGGAAAAATTA 60.675 43.478 0.00 0.00 0.00 1.40
348 349 2.698803 GAATGGGCTTGCGGAAAAATT 58.301 42.857 0.00 0.00 0.00 1.82
350 351 0.038709 CGAATGGGCTTGCGGAAAAA 60.039 50.000 0.00 0.00 0.00 1.94
351 352 1.583986 CGAATGGGCTTGCGGAAAA 59.416 52.632 0.00 0.00 0.00 2.29
352 353 2.339556 CCGAATGGGCTTGCGGAAA 61.340 57.895 0.00 0.00 46.29 3.13
427 440 2.074576 TGTGAGAGTCTACTTCGTCGG 58.925 52.381 0.00 0.00 0.00 4.79
429 442 2.159490 GGCTGTGAGAGTCTACTTCGTC 60.159 54.545 0.00 0.00 0.00 4.20
484 503 2.030562 CCGCCGTCACTTGGAAGT 59.969 61.111 0.00 0.00 40.60 3.01
790 861 0.319469 CCCAAACACGCCACCATTTC 60.319 55.000 0.00 0.00 0.00 2.17
809 880 8.674263 AATCTGATAACAATGAGATCTCAACC 57.326 34.615 28.40 4.07 43.58 3.77
854 925 2.477375 CGAAATCGGACCTTGAACGAAA 59.523 45.455 0.00 0.00 40.27 3.46
855 926 2.063266 CGAAATCGGACCTTGAACGAA 58.937 47.619 0.00 0.00 40.27 3.85
856 927 1.705256 CGAAATCGGACCTTGAACGA 58.295 50.000 0.00 0.00 41.20 3.85
857 928 0.094730 GCGAAATCGGACCTTGAACG 59.905 55.000 4.84 0.00 40.23 3.95
993 1070 2.038295 GGATTTGTTGGCCATGGTGAAA 59.962 45.455 14.67 1.78 0.00 2.69
1272 1349 6.213600 AGGTGAACTTAGTCCTGACATTATGT 59.786 38.462 0.00 0.00 0.00 2.29
1572 3954 2.809696 CACACTGAATGTCACATCTGCA 59.190 45.455 0.00 0.00 40.64 4.41
1892 4274 1.013596 TGTTGTTGCAACAGTCTCCG 58.986 50.000 29.50 0.00 40.50 4.63
2070 4458 2.686106 GACTAGCCACCCCGGGAA 60.686 66.667 26.32 0.00 34.06 3.97
2076 4464 0.969409 ACGTACCAGACTAGCCACCC 60.969 60.000 0.00 0.00 0.00 4.61
2088 4476 4.345859 AATTTGACCTCTGAACGTACCA 57.654 40.909 0.00 0.00 0.00 3.25
2180 4580 2.472861 CGACTCATCACAATATCACGGC 59.527 50.000 0.00 0.00 0.00 5.68
2591 5018 8.052748 TGGCTCATATGTGGTTACTCTTAAAAT 58.947 33.333 1.90 0.00 0.00 1.82
2592 5019 7.398829 TGGCTCATATGTGGTTACTCTTAAAA 58.601 34.615 1.90 0.00 0.00 1.52
2593 5020 6.953101 TGGCTCATATGTGGTTACTCTTAAA 58.047 36.000 1.90 0.00 0.00 1.52
2594 5021 6.553953 TGGCTCATATGTGGTTACTCTTAA 57.446 37.500 1.90 0.00 0.00 1.85
2595 5022 6.553953 TTGGCTCATATGTGGTTACTCTTA 57.446 37.500 1.90 0.00 0.00 2.10
2596 5023 5.435686 TTGGCTCATATGTGGTTACTCTT 57.564 39.130 1.90 0.00 0.00 2.85
2597 5024 5.435686 TTTGGCTCATATGTGGTTACTCT 57.564 39.130 1.90 0.00 0.00 3.24
2598 5025 6.509418 TTTTTGGCTCATATGTGGTTACTC 57.491 37.500 1.90 0.00 0.00 2.59
2644 5072 7.595604 TCGAACTTAGTTGACATACATGTGTA 58.404 34.615 9.11 0.00 41.95 2.90
2650 5078 8.651391 TTTCTTTCGAACTTAGTTGACATACA 57.349 30.769 0.93 0.00 0.00 2.29
2651 5079 9.582223 CTTTTCTTTCGAACTTAGTTGACATAC 57.418 33.333 0.93 0.00 0.00 2.39
2731 5159 5.654209 GCCCCTTCTCTCATCAGTTTTTATT 59.346 40.000 0.00 0.00 0.00 1.40
2733 5161 4.589908 GCCCCTTCTCTCATCAGTTTTTA 58.410 43.478 0.00 0.00 0.00 1.52
2734 5162 3.425659 GCCCCTTCTCTCATCAGTTTTT 58.574 45.455 0.00 0.00 0.00 1.94
2735 5163 2.616510 CGCCCCTTCTCTCATCAGTTTT 60.617 50.000 0.00 0.00 0.00 2.43
2736 5164 1.065854 CGCCCCTTCTCTCATCAGTTT 60.066 52.381 0.00 0.00 0.00 2.66
2737 5165 0.539051 CGCCCCTTCTCTCATCAGTT 59.461 55.000 0.00 0.00 0.00 3.16
2738 5166 0.616111 ACGCCCCTTCTCTCATCAGT 60.616 55.000 0.00 0.00 0.00 3.41
2739 5167 0.539051 AACGCCCCTTCTCTCATCAG 59.461 55.000 0.00 0.00 0.00 2.90
2740 5168 0.984230 AAACGCCCCTTCTCTCATCA 59.016 50.000 0.00 0.00 0.00 3.07
2741 5169 1.373570 CAAACGCCCCTTCTCTCATC 58.626 55.000 0.00 0.00 0.00 2.92
2742 5170 0.678048 GCAAACGCCCCTTCTCTCAT 60.678 55.000 0.00 0.00 0.00 2.90
2745 5173 2.034221 GGCAAACGCCCCTTCTCT 59.966 61.111 0.00 0.00 44.46 3.10
2755 5183 3.190744 TCAGTAGTGAGAGTAGGCAAACG 59.809 47.826 0.00 0.00 0.00 3.60
2756 5184 4.785511 TCAGTAGTGAGAGTAGGCAAAC 57.214 45.455 0.00 0.00 0.00 2.93
2757 5185 5.717178 AGATTCAGTAGTGAGAGTAGGCAAA 59.283 40.000 0.00 0.00 32.98 3.68
2759 5187 4.642437 CAGATTCAGTAGTGAGAGTAGGCA 59.358 45.833 0.00 0.00 32.98 4.75
2761 5189 4.037446 GGCAGATTCAGTAGTGAGAGTAGG 59.963 50.000 0.00 0.00 32.98 3.18
2762 5190 4.037446 GGGCAGATTCAGTAGTGAGAGTAG 59.963 50.000 0.00 0.00 32.98 2.57
2763 5191 3.954904 GGGCAGATTCAGTAGTGAGAGTA 59.045 47.826 0.00 0.00 32.98 2.59
2765 5193 2.223688 CGGGCAGATTCAGTAGTGAGAG 60.224 54.545 0.00 0.00 32.98 3.20
2767 5195 1.478510 ACGGGCAGATTCAGTAGTGAG 59.521 52.381 0.00 0.00 32.98 3.51
2768 5196 1.557099 ACGGGCAGATTCAGTAGTGA 58.443 50.000 0.00 0.00 0.00 3.41
2769 5197 2.386661 AACGGGCAGATTCAGTAGTG 57.613 50.000 0.00 0.00 0.00 2.74
2771 5199 3.600388 AGAAAACGGGCAGATTCAGTAG 58.400 45.455 9.49 0.00 0.00 2.57
2772 5200 3.695830 AGAAAACGGGCAGATTCAGTA 57.304 42.857 9.49 0.00 0.00 2.74
2774 5202 2.162408 GGAAGAAAACGGGCAGATTCAG 59.838 50.000 9.49 0.00 0.00 3.02
2775 5203 2.159382 GGAAGAAAACGGGCAGATTCA 58.841 47.619 9.49 0.00 0.00 2.57
2776 5204 1.130561 CGGAAGAAAACGGGCAGATTC 59.869 52.381 0.00 0.00 0.00 2.52
2778 5206 0.036306 ACGGAAGAAAACGGGCAGAT 59.964 50.000 0.00 0.00 0.00 2.90
2779 5207 0.680618 TACGGAAGAAAACGGGCAGA 59.319 50.000 0.00 0.00 0.00 4.26
2780 5208 1.515081 TTACGGAAGAAAACGGGCAG 58.485 50.000 0.00 0.00 0.00 4.85
2781 5209 2.188062 ATTACGGAAGAAAACGGGCA 57.812 45.000 0.00 0.00 0.00 5.36
2783 5211 4.223659 CAACAATTACGGAAGAAAACGGG 58.776 43.478 0.00 0.00 0.00 5.28
2784 5212 4.851010 ACAACAATTACGGAAGAAAACGG 58.149 39.130 0.00 0.00 0.00 4.44
2785 5213 6.799786 AAACAACAATTACGGAAGAAAACG 57.200 33.333 0.00 0.00 0.00 3.60
2795 5232 7.148820 CCTTGGCAATAGAAAACAACAATTACG 60.149 37.037 0.00 0.00 0.00 3.18
2796 5233 7.655732 ACCTTGGCAATAGAAAACAACAATTAC 59.344 33.333 0.00 0.00 0.00 1.89
2806 5243 5.381757 ACTACACACCTTGGCAATAGAAAA 58.618 37.500 0.00 0.00 0.00 2.29
2840 5277 2.628657 GCCCTACCAGATACTGTACCTG 59.371 54.545 1.96 1.96 0.00 4.00
2909 5346 9.755804 TGCATGTGTAATATTAAGAGAGAGAAG 57.244 33.333 0.00 0.00 0.00 2.85
2961 5400 7.755373 GCCTATGCTTCGAAAAAGATTTTTACT 59.245 33.333 0.00 0.00 36.12 2.24
2962 5401 7.540745 TGCCTATGCTTCGAAAAAGATTTTTAC 59.459 33.333 0.00 0.00 38.21 2.01
2963 5402 7.598278 TGCCTATGCTTCGAAAAAGATTTTTA 58.402 30.769 0.00 0.00 38.21 1.52
2964 5403 6.454795 TGCCTATGCTTCGAAAAAGATTTTT 58.545 32.000 0.00 3.03 39.60 1.94
2965 5404 6.024552 TGCCTATGCTTCGAAAAAGATTTT 57.975 33.333 0.00 0.00 38.71 1.82
2966 5405 5.643379 TGCCTATGCTTCGAAAAAGATTT 57.357 34.783 0.00 0.00 38.71 2.17
2967 5406 5.643379 TTGCCTATGCTTCGAAAAAGATT 57.357 34.783 0.00 0.00 38.71 2.40
2968 5407 5.643379 TTTGCCTATGCTTCGAAAAAGAT 57.357 34.783 0.00 0.00 38.71 2.40
2969 5408 5.240623 TCTTTTGCCTATGCTTCGAAAAAGA 59.759 36.000 10.33 10.33 39.85 2.52
2970 5409 5.460646 TCTTTTGCCTATGCTTCGAAAAAG 58.539 37.500 0.00 3.23 37.07 2.27
2971 5410 5.446143 TCTTTTGCCTATGCTTCGAAAAA 57.554 34.783 0.00 0.00 38.71 1.94
2972 5411 5.643379 ATCTTTTGCCTATGCTTCGAAAA 57.357 34.783 0.00 0.00 38.71 2.29
2973 5412 5.643379 AATCTTTTGCCTATGCTTCGAAA 57.357 34.783 0.00 0.00 38.71 3.46
2974 5413 5.401550 CAAATCTTTTGCCTATGCTTCGAA 58.598 37.500 0.00 0.00 38.71 3.71
2975 5414 4.675146 GCAAATCTTTTGCCTATGCTTCGA 60.675 41.667 12.74 0.00 39.38 3.71
2976 5415 3.549070 GCAAATCTTTTGCCTATGCTTCG 59.451 43.478 12.74 0.00 39.38 3.79
2986 5425 1.922545 GCGATGAGGCAAATCTTTTGC 59.077 47.619 14.88 14.88 44.22 3.68
2987 5426 3.498927 AGCGATGAGGCAAATCTTTTG 57.501 42.857 0.00 0.00 34.64 2.44
2988 5427 5.643379 TTAAGCGATGAGGCAAATCTTTT 57.357 34.783 0.00 0.00 34.64 2.27
2989 5428 5.841957 ATTAAGCGATGAGGCAAATCTTT 57.158 34.783 0.00 0.00 34.64 2.52
2990 5429 5.841957 AATTAAGCGATGAGGCAAATCTT 57.158 34.783 0.00 0.00 34.64 2.40
2991 5430 6.942532 TTAATTAAGCGATGAGGCAAATCT 57.057 33.333 0.00 0.00 34.64 2.40
3006 5445 7.148018 TGGGCAATTCTCTTCTGCTTAATTAAG 60.148 37.037 19.08 19.08 36.32 1.85
3007 5446 6.663093 TGGGCAATTCTCTTCTGCTTAATTAA 59.337 34.615 0.00 0.00 36.32 1.40
3008 5447 6.186957 TGGGCAATTCTCTTCTGCTTAATTA 58.813 36.000 0.00 0.00 36.32 1.40
3009 5448 5.018809 TGGGCAATTCTCTTCTGCTTAATT 58.981 37.500 0.00 0.00 36.32 1.40
3010 5449 4.603131 TGGGCAATTCTCTTCTGCTTAAT 58.397 39.130 0.00 0.00 36.32 1.40
3011 5450 4.012374 CTGGGCAATTCTCTTCTGCTTAA 58.988 43.478 0.00 0.00 36.32 1.85
3012 5451 3.009473 ACTGGGCAATTCTCTTCTGCTTA 59.991 43.478 0.00 0.00 36.32 3.09
3013 5452 2.224967 ACTGGGCAATTCTCTTCTGCTT 60.225 45.455 0.00 0.00 36.32 3.91
3014 5453 1.353694 ACTGGGCAATTCTCTTCTGCT 59.646 47.619 0.00 0.00 36.32 4.24
3015 5454 1.831580 ACTGGGCAATTCTCTTCTGC 58.168 50.000 0.00 0.00 35.28 4.26
3016 5455 3.415212 TCAACTGGGCAATTCTCTTCTG 58.585 45.455 0.00 0.00 0.00 3.02
3017 5456 3.795688 TCAACTGGGCAATTCTCTTCT 57.204 42.857 0.00 0.00 0.00 2.85
3018 5457 6.325596 GTTAATCAACTGGGCAATTCTCTTC 58.674 40.000 0.00 0.00 0.00 2.87
3019 5458 5.106157 CGTTAATCAACTGGGCAATTCTCTT 60.106 40.000 0.00 0.00 32.09 2.85
3020 5459 4.396166 CGTTAATCAACTGGGCAATTCTCT 59.604 41.667 0.00 0.00 32.09 3.10
3021 5460 4.438744 CCGTTAATCAACTGGGCAATTCTC 60.439 45.833 0.00 0.00 32.09 2.87
3022 5461 3.443681 CCGTTAATCAACTGGGCAATTCT 59.556 43.478 0.00 0.00 32.09 2.40
3023 5462 3.442273 TCCGTTAATCAACTGGGCAATTC 59.558 43.478 0.00 0.00 32.55 2.17
3024 5463 3.426615 TCCGTTAATCAACTGGGCAATT 58.573 40.909 0.00 0.00 32.55 2.32
3025 5464 3.080300 TCCGTTAATCAACTGGGCAAT 57.920 42.857 0.00 0.00 32.55 3.56
3026 5465 2.570415 TCCGTTAATCAACTGGGCAA 57.430 45.000 0.00 0.00 32.55 4.52
3027 5466 2.570415 TTCCGTTAATCAACTGGGCA 57.430 45.000 0.00 0.00 32.55 5.36
3028 5467 3.571571 GTTTTCCGTTAATCAACTGGGC 58.428 45.455 0.00 0.00 32.55 5.36
3029 5468 4.168922 GGTTTTCCGTTAATCAACTGGG 57.831 45.455 0.00 0.00 32.55 4.45
3056 5495 3.838903 TGTGGTTGGTTTGTACCCTTTTT 59.161 39.130 0.00 0.00 44.35 1.94
3057 5496 3.442076 TGTGGTTGGTTTGTACCCTTTT 58.558 40.909 0.00 0.00 44.35 2.27
3058 5497 3.103080 TGTGGTTGGTTTGTACCCTTT 57.897 42.857 0.00 0.00 44.35 3.11
3059 5498 2.830651 TGTGGTTGGTTTGTACCCTT 57.169 45.000 0.00 0.00 44.35 3.95
3060 5499 2.091555 ACATGTGGTTGGTTTGTACCCT 60.092 45.455 0.00 0.00 44.35 4.34
3061 5500 2.035321 CACATGTGGTTGGTTTGTACCC 59.965 50.000 18.51 0.00 44.35 3.69
3062 5501 2.035321 CCACATGTGGTTGGTTTGTACC 59.965 50.000 32.94 0.00 45.53 3.34
3063 5502 3.363341 CCACATGTGGTTGGTTTGTAC 57.637 47.619 32.94 0.00 45.53 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.