Multiple sequence alignment - TraesCS2A01G467500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G467500 chr2A 100.000 2744 0 0 1 2744 711872962 711870219 0.000000e+00 5068
1 TraesCS2A01G467500 chr2A 85.744 484 55 7 1262 1744 749803723 749804193 1.470000e-137 499
2 TraesCS2A01G467500 chr2D 91.073 1557 86 24 880 2400 572673735 572672196 0.000000e+00 2056
3 TraesCS2A01G467500 chr2D 85.271 516 59 10 1230 1744 618700660 618701159 1.460000e-142 516
4 TraesCS2A01G467500 chr2D 90.217 92 9 0 702 793 572673843 572673752 1.330000e-23 121
5 TraesCS2A01G467500 chr2B 89.655 1566 99 25 837 2359 688235965 688234420 0.000000e+00 1936
6 TraesCS2A01G467500 chr6A 97.655 597 14 0 1 597 312912203 312912799 0.000000e+00 1026
7 TraesCS2A01G467500 chr3A 96.985 597 18 0 1 597 476572183 476572779 0.000000e+00 1003
8 TraesCS2A01G467500 chr3A 86.877 602 51 14 1 601 730615022 730615596 0.000000e+00 649
9 TraesCS2A01G467500 chr4A 96.817 597 19 0 1 597 575833450 575832854 0.000000e+00 998
10 TraesCS2A01G467500 chr4A 86.769 325 27 13 240 562 593757703 593758013 5.620000e-92 348
11 TraesCS2A01G467500 chr5A 95.432 613 20 3 1 612 6976740 6976135 0.000000e+00 970
12 TraesCS2A01G467500 chr5A 95.987 598 17 2 1 597 707874240 707874831 0.000000e+00 965
13 TraesCS2A01G467500 chr1B 95.318 598 20 4 1 597 653802719 653802129 0.000000e+00 942
14 TraesCS2A01G467500 chr1D 87.539 321 27 8 243 562 480633573 480633265 2.600000e-95 359


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G467500 chr2A 711870219 711872962 2743 True 5068.0 5068 100.000 1 2744 1 chr2A.!!$R1 2743
1 TraesCS2A01G467500 chr2D 572672196 572673843 1647 True 1088.5 2056 90.645 702 2400 2 chr2D.!!$R1 1698
2 TraesCS2A01G467500 chr2B 688234420 688235965 1545 True 1936.0 1936 89.655 837 2359 1 chr2B.!!$R1 1522
3 TraesCS2A01G467500 chr6A 312912203 312912799 596 False 1026.0 1026 97.655 1 597 1 chr6A.!!$F1 596
4 TraesCS2A01G467500 chr3A 476572183 476572779 596 False 1003.0 1003 96.985 1 597 1 chr3A.!!$F1 596
5 TraesCS2A01G467500 chr3A 730615022 730615596 574 False 649.0 649 86.877 1 601 1 chr3A.!!$F2 600
6 TraesCS2A01G467500 chr4A 575832854 575833450 596 True 998.0 998 96.817 1 597 1 chr4A.!!$R1 596
7 TraesCS2A01G467500 chr5A 6976135 6976740 605 True 970.0 970 95.432 1 612 1 chr5A.!!$R1 611
8 TraesCS2A01G467500 chr5A 707874240 707874831 591 False 965.0 965 95.987 1 597 1 chr5A.!!$F1 596
9 TraesCS2A01G467500 chr1B 653802129 653802719 590 True 942.0 942 95.318 1 597 1 chr1B.!!$R1 596

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
642 644 0.033366 AACGAAAACCTTGGGCATGC 59.967 50.0 9.9 9.9 0.0 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2455 2517 0.106708 CCCCACGGTCCTGATGTATG 59.893 60.0 0.0 0.0 0.0 2.39 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
381 382 5.244178 AGGTTTAGAGTTCGAGTCTTGTCAT 59.756 40.000 4.84 0.00 0.00 3.06
389 390 1.392853 CGAGTCTTGTCATCAGCAAGC 59.607 52.381 0.00 0.00 42.06 4.01
626 628 6.971337 ATATCTTTATCAGAACGTCGAACG 57.029 37.500 0.00 5.97 39.63 3.95
627 629 4.408993 TCTTTATCAGAACGTCGAACGA 57.591 40.909 13.06 0.00 46.05 3.85
628 630 4.786507 TCTTTATCAGAACGTCGAACGAA 58.213 39.130 13.06 0.00 46.05 3.85
629 631 5.214417 TCTTTATCAGAACGTCGAACGAAA 58.786 37.500 13.06 2.64 46.05 3.46
630 632 5.686841 TCTTTATCAGAACGTCGAACGAAAA 59.313 36.000 13.06 0.00 46.05 2.29
631 633 3.765505 ATCAGAACGTCGAACGAAAAC 57.234 42.857 13.06 3.44 46.05 2.43
632 634 1.854126 TCAGAACGTCGAACGAAAACC 59.146 47.619 13.06 0.00 46.05 3.27
633 635 1.856597 CAGAACGTCGAACGAAAACCT 59.143 47.619 13.06 0.00 46.05 3.50
634 636 2.283351 CAGAACGTCGAACGAAAACCTT 59.717 45.455 13.06 0.00 46.05 3.50
635 637 2.283351 AGAACGTCGAACGAAAACCTTG 59.717 45.455 13.06 0.00 46.05 3.61
636 638 0.932399 ACGTCGAACGAAAACCTTGG 59.068 50.000 13.06 0.00 46.05 3.61
637 639 0.233848 CGTCGAACGAAAACCTTGGG 59.766 55.000 0.00 0.00 46.05 4.12
638 640 0.040692 GTCGAACGAAAACCTTGGGC 60.041 55.000 0.00 0.00 0.00 5.36
639 641 0.464013 TCGAACGAAAACCTTGGGCA 60.464 50.000 0.00 0.00 0.00 5.36
640 642 0.596082 CGAACGAAAACCTTGGGCAT 59.404 50.000 0.00 0.00 0.00 4.40
641 643 1.665735 CGAACGAAAACCTTGGGCATG 60.666 52.381 0.00 0.00 0.00 4.06
642 644 0.033366 AACGAAAACCTTGGGCATGC 59.967 50.000 9.90 9.90 0.00 4.06
643 645 1.079888 CGAAAACCTTGGGCATGCC 60.080 57.895 29.47 29.47 0.00 4.40
653 655 4.479993 GGCATGCCCTCTCAGCGT 62.480 66.667 27.24 0.00 0.00 5.07
655 657 3.200593 CATGCCCTCTCAGCGTGC 61.201 66.667 0.00 0.00 40.14 5.34
656 658 3.397439 ATGCCCTCTCAGCGTGCT 61.397 61.111 0.00 0.00 0.00 4.40
657 659 3.677284 ATGCCCTCTCAGCGTGCTG 62.677 63.158 15.59 15.59 44.86 4.41
658 660 4.385405 GCCCTCTCAGCGTGCTGT 62.385 66.667 20.33 0.00 43.96 4.40
659 661 2.125753 CCCTCTCAGCGTGCTGTC 60.126 66.667 20.33 0.00 43.96 3.51
660 662 2.644212 CCCTCTCAGCGTGCTGTCT 61.644 63.158 20.33 0.00 43.96 3.41
661 663 1.291588 CCTCTCAGCGTGCTGTCTT 59.708 57.895 20.33 0.00 43.96 3.01
662 664 0.735632 CCTCTCAGCGTGCTGTCTTC 60.736 60.000 20.33 0.00 43.96 2.87
663 665 0.038801 CTCTCAGCGTGCTGTCTTCA 60.039 55.000 20.33 1.13 43.96 3.02
664 666 0.038801 TCTCAGCGTGCTGTCTTCAG 60.039 55.000 20.33 10.79 43.96 3.02
665 667 0.038801 CTCAGCGTGCTGTCTTCAGA 60.039 55.000 20.33 0.00 43.76 3.27
666 668 0.605083 TCAGCGTGCTGTCTTCAGAT 59.395 50.000 20.33 0.00 43.76 2.90
667 669 0.997932 CAGCGTGCTGTCTTCAGATC 59.002 55.000 13.62 0.00 43.76 2.75
668 670 0.605083 AGCGTGCTGTCTTCAGATCA 59.395 50.000 0.00 0.00 43.76 2.92
669 671 0.718343 GCGTGCTGTCTTCAGATCAC 59.282 55.000 0.00 0.00 43.76 3.06
670 672 1.354040 CGTGCTGTCTTCAGATCACC 58.646 55.000 0.00 0.00 43.76 4.02
671 673 1.731720 GTGCTGTCTTCAGATCACCC 58.268 55.000 0.00 0.00 43.76 4.61
672 674 0.247460 TGCTGTCTTCAGATCACCCG 59.753 55.000 0.00 0.00 43.76 5.28
673 675 0.460987 GCTGTCTTCAGATCACCCGG 60.461 60.000 0.00 0.00 43.76 5.73
674 676 1.186200 CTGTCTTCAGATCACCCGGA 58.814 55.000 0.73 0.00 43.76 5.14
675 677 1.135915 CTGTCTTCAGATCACCCGGAG 59.864 57.143 0.73 0.00 43.76 4.63
676 678 1.272480 TGTCTTCAGATCACCCGGAGA 60.272 52.381 0.73 0.00 0.00 3.71
677 679 2.035632 GTCTTCAGATCACCCGGAGAT 58.964 52.381 0.73 5.95 0.00 2.75
678 680 2.034878 TCTTCAGATCACCCGGAGATG 58.965 52.381 13.20 4.24 0.00 2.90
679 681 2.034878 CTTCAGATCACCCGGAGATGA 58.965 52.381 13.20 9.41 0.00 2.92
680 682 2.388526 TCAGATCACCCGGAGATGAT 57.611 50.000 13.20 13.44 38.28 2.45
681 683 2.682594 TCAGATCACCCGGAGATGATT 58.317 47.619 13.20 4.03 35.67 2.57
682 684 2.630098 TCAGATCACCCGGAGATGATTC 59.370 50.000 13.20 8.56 35.67 2.52
683 685 1.974236 AGATCACCCGGAGATGATTCC 59.026 52.381 13.20 4.57 35.67 3.01
684 686 1.694150 GATCACCCGGAGATGATTCCA 59.306 52.381 13.20 0.00 35.67 3.53
685 687 1.806496 TCACCCGGAGATGATTCCAT 58.194 50.000 0.73 0.00 37.05 3.41
686 688 2.970987 TCACCCGGAGATGATTCCATA 58.029 47.619 0.73 0.00 37.05 2.74
687 689 3.313791 TCACCCGGAGATGATTCCATAA 58.686 45.455 0.73 0.00 37.05 1.90
688 690 3.071023 TCACCCGGAGATGATTCCATAAC 59.929 47.826 0.73 0.00 37.05 1.89
689 691 2.372172 ACCCGGAGATGATTCCATAACC 59.628 50.000 0.73 0.00 37.05 2.85
690 692 2.639839 CCCGGAGATGATTCCATAACCT 59.360 50.000 0.73 0.00 37.05 3.50
691 693 3.557898 CCCGGAGATGATTCCATAACCTG 60.558 52.174 0.73 0.00 37.05 4.00
692 694 3.071602 CCGGAGATGATTCCATAACCTGT 59.928 47.826 0.00 0.00 37.05 4.00
693 695 4.444876 CCGGAGATGATTCCATAACCTGTT 60.445 45.833 0.00 0.00 37.05 3.16
694 696 5.126067 CGGAGATGATTCCATAACCTGTTT 58.874 41.667 0.00 0.00 37.05 2.83
695 697 5.237344 CGGAGATGATTCCATAACCTGTTTC 59.763 44.000 0.00 0.00 37.05 2.78
696 698 6.360618 GGAGATGATTCCATAACCTGTTTCT 58.639 40.000 0.00 0.00 37.20 2.52
697 699 6.484977 GGAGATGATTCCATAACCTGTTTCTC 59.515 42.308 0.00 0.00 37.20 2.87
698 700 6.051717 AGATGATTCCATAACCTGTTTCTCG 58.948 40.000 0.00 0.00 32.09 4.04
699 701 5.160607 TGATTCCATAACCTGTTTCTCGT 57.839 39.130 0.00 0.00 0.00 4.18
700 702 4.935205 TGATTCCATAACCTGTTTCTCGTG 59.065 41.667 0.00 0.00 0.00 4.35
711 713 0.522180 TTTCTCGTGAGGCTCTCGTC 59.478 55.000 30.65 12.44 35.22 4.20
718 720 1.540267 GTGAGGCTCTCGTCTGTTACA 59.460 52.381 16.72 0.00 32.35 2.41
721 723 1.067495 AGGCTCTCGTCTGTTACAAGC 60.067 52.381 0.00 0.00 0.00 4.01
797 799 7.650834 GTAGTAGATCTACCCTTGTACGTAG 57.349 44.000 25.93 0.62 42.13 3.51
798 800 6.245890 AGTAGATCTACCCTTGTACGTAGT 57.754 41.667 25.93 3.29 39.90 2.73
799 801 7.366847 AGTAGATCTACCCTTGTACGTAGTA 57.633 40.000 25.93 0.00 38.26 1.82
800 802 7.441017 AGTAGATCTACCCTTGTACGTAGTAG 58.559 42.308 25.93 10.98 39.28 2.57
801 803 7.070571 AGTAGATCTACCCTTGTACGTAGTAGT 59.929 40.741 25.93 1.91 39.28 2.73
819 821 6.443934 AGTAGTAATAGCAGTGAGAGTGTG 57.556 41.667 0.00 0.00 0.00 3.82
820 822 5.946972 AGTAGTAATAGCAGTGAGAGTGTGT 59.053 40.000 0.00 0.00 0.00 3.72
821 823 5.317733 AGTAATAGCAGTGAGAGTGTGTC 57.682 43.478 0.00 0.00 0.00 3.67
822 824 3.601443 AATAGCAGTGAGAGTGTGTCC 57.399 47.619 0.00 0.00 0.00 4.02
823 825 1.995376 TAGCAGTGAGAGTGTGTCCA 58.005 50.000 0.00 0.00 0.00 4.02
824 826 0.678395 AGCAGTGAGAGTGTGTCCAG 59.322 55.000 0.00 0.00 0.00 3.86
825 827 0.948141 GCAGTGAGAGTGTGTCCAGC 60.948 60.000 0.00 0.00 0.00 4.85
826 828 0.390492 CAGTGAGAGTGTGTCCAGCA 59.610 55.000 0.00 0.00 0.00 4.41
827 829 0.678395 AGTGAGAGTGTGTCCAGCAG 59.322 55.000 0.00 0.00 0.00 4.24
828 830 0.948141 GTGAGAGTGTGTCCAGCAGC 60.948 60.000 0.00 0.00 0.00 5.25
829 831 1.368950 GAGAGTGTGTCCAGCAGCA 59.631 57.895 0.00 0.00 0.00 4.41
830 832 0.948141 GAGAGTGTGTCCAGCAGCAC 60.948 60.000 0.00 0.00 36.26 4.40
831 833 1.227645 GAGTGTGTCCAGCAGCACA 60.228 57.895 0.00 0.00 42.50 4.57
832 834 0.815213 GAGTGTGTCCAGCAGCACAA 60.815 55.000 0.00 0.00 45.59 3.33
833 835 1.097547 AGTGTGTCCAGCAGCACAAC 61.098 55.000 0.00 0.00 45.59 3.32
834 836 1.823470 TGTGTCCAGCAGCACAACC 60.823 57.895 0.00 0.00 41.89 3.77
835 837 2.591429 TGTCCAGCAGCACAACCG 60.591 61.111 0.00 0.00 0.00 4.44
839 841 0.882927 TCCAGCAGCACAACCGTAAC 60.883 55.000 0.00 0.00 0.00 2.50
844 846 1.872237 GCAGCACAACCGTAACAGAGA 60.872 52.381 0.00 0.00 0.00 3.10
904 906 5.678132 TCGAGCTAGTAACGCATGTAATA 57.322 39.130 0.00 0.00 0.00 0.98
913 915 7.385778 AGTAACGCATGTAATAATGGTGTTT 57.614 32.000 0.00 0.00 34.44 2.83
958 960 0.395311 CTTCATCTGTGGCTGGGCAT 60.395 55.000 0.00 0.00 0.00 4.40
1014 1016 3.081554 GACATGCAGTCCCCCACT 58.918 61.111 0.00 0.00 41.56 4.00
1075 1077 2.430751 TGAGCGTGCTACAGTGCG 60.431 61.111 0.00 0.00 35.36 5.34
1156 1165 1.374758 CACTCCACACTCCGCTTCC 60.375 63.158 0.00 0.00 0.00 3.46
1195 1204 2.816958 AGCAACAGCGAGCGATGG 60.817 61.111 12.89 0.00 35.60 3.51
1534 1543 1.226974 CTGTACGACAGGATGGGCG 60.227 63.158 7.01 0.00 42.35 6.13
1723 1732 4.758251 CCATCGTCTGCACCGCCA 62.758 66.667 0.00 0.00 0.00 5.69
1735 1744 1.078708 ACCGCCATTACCAACCTCG 60.079 57.895 0.00 0.00 0.00 4.63
1748 1757 2.611518 CAACCTCGTCAAGTGATCTCC 58.388 52.381 0.00 0.00 0.00 3.71
1756 1770 2.349886 GTCAAGTGATCTCCGCATTGTC 59.650 50.000 0.00 0.00 0.00 3.18
1768 1782 1.811266 CATTGTCTGCCCGTCGAGG 60.811 63.158 0.00 0.00 40.63 4.63
1838 1868 6.640907 TGTTTGTGATATCGATCGTTGATAGG 59.359 38.462 15.94 0.00 34.49 2.57
1843 1873 1.399714 TCGATCGTTGATAGGGCACT 58.600 50.000 15.94 0.00 0.00 4.40
1854 1888 3.704566 TGATAGGGCACTTAGTGGTAGTG 59.295 47.826 14.63 0.00 44.55 2.74
1870 1904 2.412421 AGTGGTACGACGTTCTTCAC 57.588 50.000 5.50 9.81 0.00 3.18
1880 1914 1.924524 ACGTTCTTCACTGTTGTGTCG 59.075 47.619 0.00 0.00 44.14 4.35
1899 1938 4.202377 TGTCGGTGTCAGAAGGGAATAAAA 60.202 41.667 0.00 0.00 0.00 1.52
1951 1995 4.334759 AGATCTGCTCGTTTCATGGAAATG 59.665 41.667 0.00 4.88 39.19 2.32
1980 2024 3.301451 CGATCTCGATGCGTTCTTTTCAG 60.301 47.826 0.00 0.00 43.02 3.02
1989 2033 2.223479 GCGTTCTTTTCAGCACCTTCAA 60.223 45.455 0.00 0.00 0.00 2.69
2010 2062 1.092921 GGTGTGTCACTTTCCGCACA 61.093 55.000 4.27 0.00 42.41 4.57
2186 2248 4.430765 CTCCAACCGCCGCGTAGT 62.431 66.667 12.58 0.00 0.00 2.73
2188 2250 2.105528 CCAACCGCCGCGTAGTAT 59.894 61.111 12.58 0.00 0.00 2.12
2192 2254 0.108709 AACCGCCGCGTAGTATGAAA 60.109 50.000 12.58 0.00 0.00 2.69
2193 2255 0.103572 ACCGCCGCGTAGTATGAAAT 59.896 50.000 12.58 0.00 0.00 2.17
2195 2257 0.506932 CGCCGCGTAGTATGAAATGG 59.493 55.000 4.92 0.00 0.00 3.16
2196 2258 1.860676 GCCGCGTAGTATGAAATGGA 58.139 50.000 4.92 0.00 0.00 3.41
2197 2259 1.792949 GCCGCGTAGTATGAAATGGAG 59.207 52.381 4.92 0.00 0.00 3.86
2198 2260 2.802057 GCCGCGTAGTATGAAATGGAGT 60.802 50.000 4.92 0.00 0.00 3.85
2199 2261 3.551454 GCCGCGTAGTATGAAATGGAGTA 60.551 47.826 4.92 0.00 0.00 2.59
2200 2262 3.979495 CCGCGTAGTATGAAATGGAGTAC 59.021 47.826 4.92 0.00 0.00 2.73
2216 2278 3.674050 TACGGCCAGAGGGGAGGAC 62.674 68.421 2.24 0.00 40.01 3.85
2311 2373 2.480555 GCCGAATCTGTGTTGCCG 59.519 61.111 0.00 0.00 0.00 5.69
2388 2450 1.276421 CCGCTCCCGATGGATTATCTT 59.724 52.381 0.00 0.00 40.80 2.40
2400 2462 5.604758 TGGATTATCTTGAGTCTCCACTG 57.395 43.478 0.00 0.00 30.63 3.66
2401 2463 4.141846 TGGATTATCTTGAGTCTCCACTGC 60.142 45.833 0.00 0.00 30.63 4.40
2402 2464 3.895232 TTATCTTGAGTCTCCACTGCC 57.105 47.619 0.00 0.00 30.63 4.85
2403 2465 0.908198 ATCTTGAGTCTCCACTGCCC 59.092 55.000 0.00 0.00 30.63 5.36
2404 2466 1.079543 CTTGAGTCTCCACTGCCCG 60.080 63.158 0.00 0.00 30.63 6.13
2405 2467 3.240134 TTGAGTCTCCACTGCCCGC 62.240 63.158 0.00 0.00 30.63 6.13
2406 2468 3.695606 GAGTCTCCACTGCCCGCA 61.696 66.667 0.00 0.00 30.63 5.69
2407 2469 3.941657 GAGTCTCCACTGCCCGCAC 62.942 68.421 0.00 0.00 30.63 5.34
2412 2474 4.690719 CCACTGCCCGCACCGTTA 62.691 66.667 0.00 0.00 0.00 3.18
2413 2475 2.666862 CACTGCCCGCACCGTTAA 60.667 61.111 0.00 0.00 0.00 2.01
2414 2476 2.358247 ACTGCCCGCACCGTTAAG 60.358 61.111 0.00 0.00 0.00 1.85
2415 2477 2.047655 CTGCCCGCACCGTTAAGA 60.048 61.111 0.00 0.00 0.00 2.10
2416 2478 2.357760 TGCCCGCACCGTTAAGAC 60.358 61.111 0.00 0.00 0.00 3.01
2417 2479 2.357760 GCCCGCACCGTTAAGACA 60.358 61.111 0.00 0.00 0.00 3.41
2418 2480 2.674084 GCCCGCACCGTTAAGACAC 61.674 63.158 0.00 0.00 0.00 3.67
2419 2481 1.005394 CCCGCACCGTTAAGACACT 60.005 57.895 0.00 0.00 0.00 3.55
2420 2482 0.244450 CCCGCACCGTTAAGACACTA 59.756 55.000 0.00 0.00 0.00 2.74
2421 2483 1.337074 CCCGCACCGTTAAGACACTAA 60.337 52.381 0.00 0.00 0.00 2.24
2422 2484 2.613691 CCGCACCGTTAAGACACTAAT 58.386 47.619 0.00 0.00 0.00 1.73
2423 2485 2.347452 CCGCACCGTTAAGACACTAATG 59.653 50.000 0.00 0.00 0.00 1.90
2424 2486 2.347452 CGCACCGTTAAGACACTAATGG 59.653 50.000 0.96 0.96 41.79 3.16
2425 2487 2.095372 GCACCGTTAAGACACTAATGGC 59.905 50.000 2.22 0.00 40.34 4.40
2426 2488 3.331150 CACCGTTAAGACACTAATGGCA 58.669 45.455 0.00 0.00 40.34 4.92
2427 2489 3.938963 CACCGTTAAGACACTAATGGCAT 59.061 43.478 0.00 0.00 40.34 4.40
2428 2490 4.034048 CACCGTTAAGACACTAATGGCATC 59.966 45.833 0.00 0.00 40.34 3.91
2429 2491 4.081087 ACCGTTAAGACACTAATGGCATCT 60.081 41.667 0.00 0.00 40.34 2.90
2430 2492 4.508124 CCGTTAAGACACTAATGGCATCTC 59.492 45.833 0.00 0.00 35.60 2.75
2431 2493 4.508124 CGTTAAGACACTAATGGCATCTCC 59.492 45.833 0.00 0.00 35.60 3.71
2440 2502 2.435938 GGCATCTCCAACGCCGAA 60.436 61.111 0.00 0.00 35.79 4.30
2441 2503 2.750888 GGCATCTCCAACGCCGAAC 61.751 63.158 0.00 0.00 35.79 3.95
2442 2504 2.750888 GCATCTCCAACGCCGAACC 61.751 63.158 0.00 0.00 0.00 3.62
2443 2505 1.079127 CATCTCCAACGCCGAACCT 60.079 57.895 0.00 0.00 0.00 3.50
2444 2506 1.084370 CATCTCCAACGCCGAACCTC 61.084 60.000 0.00 0.00 0.00 3.85
2445 2507 2.240162 ATCTCCAACGCCGAACCTCC 62.240 60.000 0.00 0.00 0.00 4.30
2446 2508 4.367023 TCCAACGCCGAACCTCCG 62.367 66.667 0.00 0.00 0.00 4.63
2447 2509 4.367023 CCAACGCCGAACCTCCGA 62.367 66.667 0.00 0.00 0.00 4.55
2448 2510 3.110178 CAACGCCGAACCTCCGAC 61.110 66.667 0.00 0.00 0.00 4.79
2449 2511 4.368543 AACGCCGAACCTCCGACC 62.369 66.667 0.00 0.00 0.00 4.79
2452 2514 4.754667 GCCGAACCTCCGACCACC 62.755 72.222 0.00 0.00 0.00 4.61
2453 2515 4.078516 CCGAACCTCCGACCACCC 62.079 72.222 0.00 0.00 0.00 4.61
2454 2516 4.430765 CGAACCTCCGACCACCCG 62.431 72.222 0.00 0.00 0.00 5.28
2455 2517 4.754667 GAACCTCCGACCACCCGC 62.755 72.222 0.00 0.00 0.00 6.13
2458 2520 3.151710 CCTCCGACCACCCGCATA 61.152 66.667 0.00 0.00 0.00 3.14
2459 2521 2.106332 CTCCGACCACCCGCATAC 59.894 66.667 0.00 0.00 0.00 2.39
2460 2522 2.680707 TCCGACCACCCGCATACA 60.681 61.111 0.00 0.00 0.00 2.29
2461 2523 2.028125 CTCCGACCACCCGCATACAT 62.028 60.000 0.00 0.00 0.00 2.29
2462 2524 1.594293 CCGACCACCCGCATACATC 60.594 63.158 0.00 0.00 0.00 3.06
2463 2525 1.142965 CGACCACCCGCATACATCA 59.857 57.895 0.00 0.00 0.00 3.07
2464 2526 0.875908 CGACCACCCGCATACATCAG 60.876 60.000 0.00 0.00 0.00 2.90
2465 2527 0.532862 GACCACCCGCATACATCAGG 60.533 60.000 0.00 0.00 0.00 3.86
2466 2528 0.980754 ACCACCCGCATACATCAGGA 60.981 55.000 0.00 0.00 0.00 3.86
2467 2529 0.532862 CCACCCGCATACATCAGGAC 60.533 60.000 0.00 0.00 0.00 3.85
2468 2530 0.532862 CACCCGCATACATCAGGACC 60.533 60.000 0.00 0.00 0.00 4.46
2469 2531 1.300931 CCCGCATACATCAGGACCG 60.301 63.158 0.00 0.00 0.00 4.79
2470 2532 1.441729 CCGCATACATCAGGACCGT 59.558 57.895 0.00 0.00 0.00 4.83
2471 2533 0.875908 CCGCATACATCAGGACCGTG 60.876 60.000 0.00 0.00 0.00 4.94
2472 2534 0.875908 CGCATACATCAGGACCGTGG 60.876 60.000 0.00 0.00 0.00 4.94
2473 2535 0.532862 GCATACATCAGGACCGTGGG 60.533 60.000 0.00 0.00 0.00 4.61
2474 2536 0.106708 CATACATCAGGACCGTGGGG 59.893 60.000 0.00 0.00 40.11 4.96
2475 2537 1.696097 ATACATCAGGACCGTGGGGC 61.696 60.000 0.00 0.00 36.48 5.80
2482 2544 4.446413 GACCGTGGGGCCTGTACG 62.446 72.222 17.32 17.32 36.48 3.67
2484 2546 4.752879 CCGTGGGGCCTGTACGTG 62.753 72.222 20.67 12.19 36.17 4.49
2485 2547 3.998672 CGTGGGGCCTGTACGTGT 61.999 66.667 16.44 0.00 33.48 4.49
2486 2548 2.428622 GTGGGGCCTGTACGTGTT 59.571 61.111 0.84 0.00 0.00 3.32
2487 2549 1.228033 GTGGGGCCTGTACGTGTTT 60.228 57.895 0.84 0.00 0.00 2.83
2488 2550 0.820482 GTGGGGCCTGTACGTGTTTT 60.820 55.000 0.84 0.00 0.00 2.43
2489 2551 0.820074 TGGGGCCTGTACGTGTTTTG 60.820 55.000 0.84 0.00 0.00 2.44
2490 2552 0.820482 GGGGCCTGTACGTGTTTTGT 60.820 55.000 0.84 0.00 0.00 2.83
2491 2553 0.589708 GGGCCTGTACGTGTTTTGTC 59.410 55.000 0.84 0.00 0.00 3.18
2492 2554 1.301423 GGCCTGTACGTGTTTTGTCA 58.699 50.000 0.00 0.00 0.00 3.58
2493 2555 1.877443 GGCCTGTACGTGTTTTGTCAT 59.123 47.619 0.00 0.00 0.00 3.06
2494 2556 2.095919 GGCCTGTACGTGTTTTGTCATC 60.096 50.000 0.00 0.00 0.00 2.92
2495 2557 2.095919 GCCTGTACGTGTTTTGTCATCC 60.096 50.000 0.00 0.00 0.00 3.51
2496 2558 3.135225 CCTGTACGTGTTTTGTCATCCA 58.865 45.455 0.00 0.00 0.00 3.41
2497 2559 3.186409 CCTGTACGTGTTTTGTCATCCAG 59.814 47.826 0.00 0.00 0.00 3.86
2498 2560 2.546368 TGTACGTGTTTTGTCATCCAGC 59.454 45.455 0.00 0.00 0.00 4.85
2499 2561 1.967319 ACGTGTTTTGTCATCCAGCT 58.033 45.000 0.00 0.00 0.00 4.24
2500 2562 2.297701 ACGTGTTTTGTCATCCAGCTT 58.702 42.857 0.00 0.00 0.00 3.74
2501 2563 2.033299 ACGTGTTTTGTCATCCAGCTTG 59.967 45.455 0.00 0.00 0.00 4.01
2502 2564 2.290367 CGTGTTTTGTCATCCAGCTTGA 59.710 45.455 0.00 0.00 0.00 3.02
2503 2565 3.243035 CGTGTTTTGTCATCCAGCTTGAA 60.243 43.478 0.00 0.00 0.00 2.69
2504 2566 4.044426 GTGTTTTGTCATCCAGCTTGAAC 58.956 43.478 0.00 0.00 0.00 3.18
2505 2567 3.068024 TGTTTTGTCATCCAGCTTGAACC 59.932 43.478 0.00 0.00 0.00 3.62
2506 2568 2.957402 TTGTCATCCAGCTTGAACCT 57.043 45.000 0.00 0.00 0.00 3.50
2507 2569 2.189594 TGTCATCCAGCTTGAACCTG 57.810 50.000 0.00 0.00 0.00 4.00
2508 2570 1.421268 TGTCATCCAGCTTGAACCTGT 59.579 47.619 0.00 0.00 0.00 4.00
2509 2571 2.637382 TGTCATCCAGCTTGAACCTGTA 59.363 45.455 0.00 0.00 0.00 2.74
2510 2572 3.264193 TGTCATCCAGCTTGAACCTGTAT 59.736 43.478 0.00 0.00 0.00 2.29
2511 2573 4.263462 TGTCATCCAGCTTGAACCTGTATT 60.263 41.667 0.00 0.00 0.00 1.89
2512 2574 4.095483 GTCATCCAGCTTGAACCTGTATTG 59.905 45.833 0.00 0.00 0.00 1.90
2513 2575 3.071874 TCCAGCTTGAACCTGTATTGG 57.928 47.619 0.00 0.00 0.00 3.16
2514 2576 2.375174 TCCAGCTTGAACCTGTATTGGT 59.625 45.455 0.00 0.00 43.11 3.67
2515 2577 2.749621 CCAGCTTGAACCTGTATTGGTC 59.250 50.000 0.00 0.00 39.83 4.02
2516 2578 2.749621 CAGCTTGAACCTGTATTGGTCC 59.250 50.000 0.00 0.00 39.83 4.46
2517 2579 1.737793 GCTTGAACCTGTATTGGTCCG 59.262 52.381 0.00 0.00 39.83 4.79
2518 2580 2.874457 GCTTGAACCTGTATTGGTCCGT 60.874 50.000 0.00 0.00 39.83 4.69
2519 2581 3.408634 CTTGAACCTGTATTGGTCCGTT 58.591 45.455 0.00 0.00 39.83 4.44
2520 2582 3.048337 TGAACCTGTATTGGTCCGTTC 57.952 47.619 0.00 0.00 39.83 3.95
2521 2583 1.997606 GAACCTGTATTGGTCCGTTCG 59.002 52.381 0.00 0.00 39.83 3.95
2522 2584 1.259609 ACCTGTATTGGTCCGTTCGA 58.740 50.000 0.00 0.00 34.86 3.71
2523 2585 1.067354 ACCTGTATTGGTCCGTTCGAC 60.067 52.381 0.00 0.00 41.15 4.20
2524 2586 1.265568 CTGTATTGGTCCGTTCGACG 58.734 55.000 0.00 0.00 42.99 5.12
2544 2606 3.930634 GGTACGGACACACTTTCTACT 57.069 47.619 0.00 0.00 0.00 2.57
2546 2608 5.376854 GGTACGGACACACTTTCTACTAA 57.623 43.478 0.00 0.00 0.00 2.24
2547 2609 5.958955 GGTACGGACACACTTTCTACTAAT 58.041 41.667 0.00 0.00 0.00 1.73
2548 2610 7.088589 GGTACGGACACACTTTCTACTAATA 57.911 40.000 0.00 0.00 0.00 0.98
2549 2611 6.969473 GGTACGGACACACTTTCTACTAATAC 59.031 42.308 0.00 0.00 0.00 1.89
2550 2612 6.579666 ACGGACACACTTTCTACTAATACA 57.420 37.500 0.00 0.00 0.00 2.29
2551 2613 6.985117 ACGGACACACTTTCTACTAATACAA 58.015 36.000 0.00 0.00 0.00 2.41
2552 2614 7.436118 ACGGACACACTTTCTACTAATACAAA 58.564 34.615 0.00 0.00 0.00 2.83
2553 2615 7.383300 ACGGACACACTTTCTACTAATACAAAC 59.617 37.037 0.00 0.00 0.00 2.93
2554 2616 7.597743 CGGACACACTTTCTACTAATACAAACT 59.402 37.037 0.00 0.00 0.00 2.66
2555 2617 9.918630 GGACACACTTTCTACTAATACAAACTA 57.081 33.333 0.00 0.00 0.00 2.24
2562 2624 9.738832 CTTTCTACTAATACAAACTAGAGGAGC 57.261 37.037 0.00 0.00 0.00 4.70
2563 2625 8.818622 TTCTACTAATACAAACTAGAGGAGCA 57.181 34.615 0.00 0.00 0.00 4.26
2564 2626 8.453238 TCTACTAATACAAACTAGAGGAGCAG 57.547 38.462 0.00 0.00 0.00 4.24
2565 2627 8.053963 TCTACTAATACAAACTAGAGGAGCAGT 58.946 37.037 0.00 0.00 0.00 4.40
2566 2628 9.339850 CTACTAATACAAACTAGAGGAGCAGTA 57.660 37.037 0.00 0.00 0.00 2.74
2567 2629 8.770010 ACTAATACAAACTAGAGGAGCAGTAT 57.230 34.615 0.00 0.00 0.00 2.12
2568 2630 8.634444 ACTAATACAAACTAGAGGAGCAGTATG 58.366 37.037 0.00 0.00 40.87 2.39
2569 2631 4.744795 ACAAACTAGAGGAGCAGTATGG 57.255 45.455 0.00 0.00 35.86 2.74
2570 2632 4.353777 ACAAACTAGAGGAGCAGTATGGA 58.646 43.478 0.00 0.00 35.86 3.41
2571 2633 4.160626 ACAAACTAGAGGAGCAGTATGGAC 59.839 45.833 0.00 0.00 35.86 4.02
2572 2634 2.577700 ACTAGAGGAGCAGTATGGACG 58.422 52.381 0.00 0.00 35.86 4.79
2573 2635 2.092321 ACTAGAGGAGCAGTATGGACGT 60.092 50.000 0.00 0.00 35.86 4.34
2574 2636 1.853963 AGAGGAGCAGTATGGACGTT 58.146 50.000 0.00 0.00 35.86 3.99
2575 2637 1.751924 AGAGGAGCAGTATGGACGTTC 59.248 52.381 0.00 0.00 35.86 3.95
2576 2638 1.476891 GAGGAGCAGTATGGACGTTCA 59.523 52.381 0.00 0.00 35.86 3.18
2577 2639 1.478510 AGGAGCAGTATGGACGTTCAG 59.521 52.381 1.50 0.00 35.86 3.02
2578 2640 1.476891 GGAGCAGTATGGACGTTCAGA 59.523 52.381 1.50 0.00 35.86 3.27
2579 2641 2.531206 GAGCAGTATGGACGTTCAGAC 58.469 52.381 13.86 13.86 35.86 3.51
2580 2642 1.893137 AGCAGTATGGACGTTCAGACA 59.107 47.619 22.91 2.59 35.86 3.41
2581 2643 2.094494 AGCAGTATGGACGTTCAGACAG 60.094 50.000 22.91 16.28 35.86 3.51
2582 2644 2.263077 CAGTATGGACGTTCAGACAGC 58.737 52.381 22.91 0.00 31.88 4.40
2583 2645 1.204941 AGTATGGACGTTCAGACAGCC 59.795 52.381 22.91 1.35 31.88 4.85
2584 2646 0.172578 TATGGACGTTCAGACAGCCG 59.827 55.000 1.50 0.00 0.00 5.52
2585 2647 3.112709 GGACGTTCAGACAGCCGC 61.113 66.667 0.00 0.00 0.00 6.53
2586 2648 2.049063 GACGTTCAGACAGCCGCT 60.049 61.111 0.00 0.00 0.00 5.52
2587 2649 1.211969 GACGTTCAGACAGCCGCTA 59.788 57.895 0.00 0.00 0.00 4.26
2588 2650 0.179134 GACGTTCAGACAGCCGCTAT 60.179 55.000 0.00 0.00 0.00 2.97
2589 2651 0.458543 ACGTTCAGACAGCCGCTATG 60.459 55.000 0.00 0.00 0.00 2.23
2590 2652 1.756375 CGTTCAGACAGCCGCTATGC 61.756 60.000 0.00 0.00 0.00 3.14
2591 2653 1.153369 TTCAGACAGCCGCTATGCC 60.153 57.895 0.00 0.00 0.00 4.40
2592 2654 2.590007 CAGACAGCCGCTATGCCC 60.590 66.667 0.00 0.00 0.00 5.36
2593 2655 4.227134 AGACAGCCGCTATGCCCG 62.227 66.667 0.00 0.00 0.00 6.13
2601 2663 3.564027 GCTATGCCCGCGTGTGAC 61.564 66.667 4.92 0.00 0.00 3.67
2602 2664 2.890474 CTATGCCCGCGTGTGACC 60.890 66.667 4.92 0.00 0.00 4.02
2603 2665 3.657448 CTATGCCCGCGTGTGACCA 62.657 63.158 4.92 0.00 0.00 4.02
2604 2666 2.923426 CTATGCCCGCGTGTGACCAT 62.923 60.000 4.92 0.70 0.00 3.55
2605 2667 2.916502 TATGCCCGCGTGTGACCATC 62.917 60.000 4.92 0.00 0.00 3.51
2607 2669 4.082523 CCCGCGTGTGACCATCCT 62.083 66.667 4.92 0.00 0.00 3.24
2608 2670 2.717044 CCCGCGTGTGACCATCCTA 61.717 63.158 4.92 0.00 0.00 2.94
2609 2671 1.216977 CCGCGTGTGACCATCCTAA 59.783 57.895 4.92 0.00 0.00 2.69
2610 2672 1.082117 CCGCGTGTGACCATCCTAAC 61.082 60.000 4.92 0.00 0.00 2.34
2611 2673 1.082117 CGCGTGTGACCATCCTAACC 61.082 60.000 0.00 0.00 0.00 2.85
2612 2674 0.743345 GCGTGTGACCATCCTAACCC 60.743 60.000 0.00 0.00 0.00 4.11
2613 2675 0.611200 CGTGTGACCATCCTAACCCA 59.389 55.000 0.00 0.00 0.00 4.51
2614 2676 1.209504 CGTGTGACCATCCTAACCCAT 59.790 52.381 0.00 0.00 0.00 4.00
2615 2677 2.741878 CGTGTGACCATCCTAACCCATC 60.742 54.545 0.00 0.00 0.00 3.51
2616 2678 2.238646 GTGTGACCATCCTAACCCATCA 59.761 50.000 0.00 0.00 0.00 3.07
2617 2679 2.916269 TGTGACCATCCTAACCCATCAA 59.084 45.455 0.00 0.00 0.00 2.57
2618 2680 3.332187 TGTGACCATCCTAACCCATCAAA 59.668 43.478 0.00 0.00 0.00 2.69
2619 2681 4.202620 TGTGACCATCCTAACCCATCAAAA 60.203 41.667 0.00 0.00 0.00 2.44
2620 2682 4.770010 GTGACCATCCTAACCCATCAAAAA 59.230 41.667 0.00 0.00 0.00 1.94
2621 2683 5.422012 GTGACCATCCTAACCCATCAAAAAT 59.578 40.000 0.00 0.00 0.00 1.82
2622 2684 5.656416 TGACCATCCTAACCCATCAAAAATC 59.344 40.000 0.00 0.00 0.00 2.17
2623 2685 4.962362 ACCATCCTAACCCATCAAAAATCC 59.038 41.667 0.00 0.00 0.00 3.01
2624 2686 4.344968 CCATCCTAACCCATCAAAAATCCC 59.655 45.833 0.00 0.00 0.00 3.85
2625 2687 3.989056 TCCTAACCCATCAAAAATCCCC 58.011 45.455 0.00 0.00 0.00 4.81
2626 2688 3.600617 TCCTAACCCATCAAAAATCCCCT 59.399 43.478 0.00 0.00 0.00 4.79
2627 2689 4.046618 TCCTAACCCATCAAAAATCCCCTT 59.953 41.667 0.00 0.00 0.00 3.95
2628 2690 4.405680 CCTAACCCATCAAAAATCCCCTTC 59.594 45.833 0.00 0.00 0.00 3.46
2629 2691 3.852858 ACCCATCAAAAATCCCCTTCT 57.147 42.857 0.00 0.00 0.00 2.85
2630 2692 4.146245 ACCCATCAAAAATCCCCTTCTT 57.854 40.909 0.00 0.00 0.00 2.52
2631 2693 4.096681 ACCCATCAAAAATCCCCTTCTTC 58.903 43.478 0.00 0.00 0.00 2.87
2632 2694 3.131046 CCCATCAAAAATCCCCTTCTTCG 59.869 47.826 0.00 0.00 0.00 3.79
2633 2695 3.429410 CCATCAAAAATCCCCTTCTTCGC 60.429 47.826 0.00 0.00 0.00 4.70
2634 2696 3.154827 TCAAAAATCCCCTTCTTCGCT 57.845 42.857 0.00 0.00 0.00 4.93
2635 2697 3.496331 TCAAAAATCCCCTTCTTCGCTT 58.504 40.909 0.00 0.00 0.00 4.68
2636 2698 4.658063 TCAAAAATCCCCTTCTTCGCTTA 58.342 39.130 0.00 0.00 0.00 3.09
2637 2699 4.457949 TCAAAAATCCCCTTCTTCGCTTAC 59.542 41.667 0.00 0.00 0.00 2.34
2638 2700 3.713826 AAATCCCCTTCTTCGCTTACA 57.286 42.857 0.00 0.00 0.00 2.41
2639 2701 2.693267 ATCCCCTTCTTCGCTTACAC 57.307 50.000 0.00 0.00 0.00 2.90
2640 2702 0.245539 TCCCCTTCTTCGCTTACACG 59.754 55.000 0.00 0.00 0.00 4.49
2641 2703 1.359459 CCCCTTCTTCGCTTACACGC 61.359 60.000 0.00 0.00 0.00 5.34
2642 2704 0.389948 CCCTTCTTCGCTTACACGCT 60.390 55.000 0.00 0.00 0.00 5.07
2643 2705 1.429463 CCTTCTTCGCTTACACGCTT 58.571 50.000 0.00 0.00 0.00 4.68
2644 2706 2.602878 CCTTCTTCGCTTACACGCTTA 58.397 47.619 0.00 0.00 0.00 3.09
2645 2707 2.344741 CCTTCTTCGCTTACACGCTTAC 59.655 50.000 0.00 0.00 0.00 2.34
2646 2708 3.243336 CTTCTTCGCTTACACGCTTACT 58.757 45.455 0.00 0.00 0.00 2.24
2647 2709 2.592194 TCTTCGCTTACACGCTTACTG 58.408 47.619 0.00 0.00 0.00 2.74
2648 2710 1.059264 CTTCGCTTACACGCTTACTGC 59.941 52.381 0.00 0.00 38.57 4.40
2649 2711 0.734942 TCGCTTACACGCTTACTGCC 60.735 55.000 0.00 0.00 38.78 4.85
2650 2712 1.693083 CGCTTACACGCTTACTGCCC 61.693 60.000 0.00 0.00 38.78 5.36
2651 2713 1.693083 GCTTACACGCTTACTGCCCG 61.693 60.000 0.00 0.00 38.78 6.13
2652 2714 1.079681 TTACACGCTTACTGCCCGG 60.080 57.895 0.00 0.00 38.78 5.73
2653 2715 1.818959 TTACACGCTTACTGCCCGGT 61.819 55.000 0.00 0.00 38.78 5.28
2654 2716 2.495366 TACACGCTTACTGCCCGGTG 62.495 60.000 0.00 0.00 38.78 4.94
2657 2719 4.715523 GCTTACTGCCCGGTGCCA 62.716 66.667 11.72 0.00 40.16 4.92
2658 2720 2.746277 CTTACTGCCCGGTGCCAC 60.746 66.667 11.72 0.00 40.16 5.01
2659 2721 4.338710 TTACTGCCCGGTGCCACC 62.339 66.667 2.98 2.98 40.16 4.61
2661 2723 3.908904 TACTGCCCGGTGCCACCTA 62.909 63.158 12.94 0.00 40.16 3.08
2662 2724 4.778143 CTGCCCGGTGCCACCTAC 62.778 72.222 12.94 1.41 40.16 3.18
2664 2726 4.468689 GCCCGGTGCCACCTACTC 62.469 72.222 12.94 0.00 35.66 2.59
2665 2727 3.000819 CCCGGTGCCACCTACTCA 61.001 66.667 12.94 0.00 35.66 3.41
2666 2728 2.264794 CCGGTGCCACCTACTCAC 59.735 66.667 12.94 0.00 35.66 3.51
2667 2729 2.579657 CCGGTGCCACCTACTCACA 61.580 63.158 12.94 0.00 35.66 3.58
2668 2730 1.079819 CGGTGCCACCTACTCACAG 60.080 63.158 12.94 0.00 35.66 3.66
2669 2731 1.816863 CGGTGCCACCTACTCACAGT 61.817 60.000 12.94 0.00 35.66 3.55
2670 2732 0.037232 GGTGCCACCTACTCACAGTC 60.037 60.000 6.63 0.00 34.73 3.51
2671 2733 0.679505 GTGCCACCTACTCACAGTCA 59.320 55.000 0.00 0.00 0.00 3.41
2672 2734 1.276421 GTGCCACCTACTCACAGTCAT 59.724 52.381 0.00 0.00 0.00 3.06
2673 2735 1.276138 TGCCACCTACTCACAGTCATG 59.724 52.381 0.00 0.00 0.00 3.07
2674 2736 1.276421 GCCACCTACTCACAGTCATGT 59.724 52.381 0.00 0.00 41.57 3.21
2675 2737 2.675317 GCCACCTACTCACAGTCATGTC 60.675 54.545 0.00 0.00 37.65 3.06
2676 2738 2.416027 CCACCTACTCACAGTCATGTCG 60.416 54.545 0.00 0.00 37.65 4.35
2677 2739 1.202582 ACCTACTCACAGTCATGTCGC 59.797 52.381 0.00 0.00 37.65 5.19
2678 2740 1.474478 CCTACTCACAGTCATGTCGCT 59.526 52.381 0.00 0.00 37.65 4.93
2679 2741 2.524034 CTACTCACAGTCATGTCGCTG 58.476 52.381 11.19 11.19 37.65 5.18
2680 2742 0.676184 ACTCACAGTCATGTCGCTGT 59.324 50.000 12.18 12.18 45.69 4.40
2681 2743 1.886542 ACTCACAGTCATGTCGCTGTA 59.113 47.619 15.73 7.71 43.27 2.74
2682 2744 2.095008 ACTCACAGTCATGTCGCTGTAG 60.095 50.000 15.73 14.89 43.27 2.74
2683 2745 2.159382 TCACAGTCATGTCGCTGTAGA 58.841 47.619 15.73 13.30 43.27 2.59
2684 2746 2.162408 TCACAGTCATGTCGCTGTAGAG 59.838 50.000 15.73 7.95 43.27 2.43
2685 2747 1.135257 ACAGTCATGTCGCTGTAGAGC 60.135 52.381 14.98 0.76 43.30 4.09
2703 2765 1.482955 CGACTGTTTCGCACTGACG 59.517 57.895 0.00 1.61 41.87 4.35
2704 2766 1.206745 CGACTGTTTCGCACTGACGT 61.207 55.000 0.00 0.00 41.87 4.34
2705 2767 0.503117 GACTGTTTCGCACTGACGTC 59.497 55.000 9.11 9.11 0.00 4.34
2706 2768 0.179121 ACTGTTTCGCACTGACGTCA 60.179 50.000 18.88 18.88 0.00 4.35
2718 2780 2.764944 GACGTCAGTCTAGAGCGGA 58.235 57.895 11.55 0.00 43.80 5.54
2719 2781 0.374410 GACGTCAGTCTAGAGCGGAC 59.626 60.000 11.55 12.26 43.80 4.79
2720 2782 1.348938 CGTCAGTCTAGAGCGGACG 59.651 63.158 22.36 22.36 44.67 4.79
2721 2783 1.062845 GTCAGTCTAGAGCGGACGC 59.937 63.158 8.91 8.91 38.58 5.19
2722 2784 1.376812 TCAGTCTAGAGCGGACGCA 60.377 57.895 19.48 0.00 44.88 5.24
2723 2785 0.958876 TCAGTCTAGAGCGGACGCAA 60.959 55.000 19.48 3.02 44.88 4.85
2724 2786 0.798771 CAGTCTAGAGCGGACGCAAC 60.799 60.000 19.48 11.99 44.88 4.17
2725 2787 1.516603 GTCTAGAGCGGACGCAACC 60.517 63.158 19.48 7.48 44.88 3.77
2726 2788 1.677966 TCTAGAGCGGACGCAACCT 60.678 57.895 19.48 14.02 44.88 3.50
2727 2789 1.226717 CTAGAGCGGACGCAACCTC 60.227 63.158 19.48 7.48 44.88 3.85
2728 2790 1.658686 CTAGAGCGGACGCAACCTCT 61.659 60.000 19.48 14.31 44.88 3.69
2729 2791 1.654954 TAGAGCGGACGCAACCTCTC 61.655 60.000 19.48 6.38 44.88 3.20
2730 2792 3.282745 GAGCGGACGCAACCTCTCA 62.283 63.158 19.48 0.00 44.88 3.27
2731 2793 2.125512 GCGGACGCAACCTCTCAT 60.126 61.111 12.31 0.00 41.49 2.90
2732 2794 1.741770 GCGGACGCAACCTCTCATT 60.742 57.895 12.31 0.00 41.49 2.57
2733 2795 0.459585 GCGGACGCAACCTCTCATTA 60.460 55.000 12.31 0.00 41.49 1.90
2734 2796 1.278238 CGGACGCAACCTCTCATTAC 58.722 55.000 0.00 0.00 0.00 1.89
2735 2797 1.278238 GGACGCAACCTCTCATTACG 58.722 55.000 0.00 0.00 0.00 3.18
2736 2798 0.645868 GACGCAACCTCTCATTACGC 59.354 55.000 0.00 0.00 0.00 4.42
2737 2799 0.739813 ACGCAACCTCTCATTACGCC 60.740 55.000 0.00 0.00 0.00 5.68
2738 2800 1.752501 CGCAACCTCTCATTACGCCG 61.753 60.000 0.00 0.00 0.00 6.46
2739 2801 1.429148 GCAACCTCTCATTACGCCGG 61.429 60.000 0.00 0.00 0.00 6.13
2740 2802 1.153429 AACCTCTCATTACGCCGGC 60.153 57.895 19.07 19.07 0.00 6.13
2741 2803 1.895020 AACCTCTCATTACGCCGGCA 61.895 55.000 28.98 7.49 0.00 5.69
2742 2804 1.069765 CCTCTCATTACGCCGGCAT 59.930 57.895 28.98 15.72 0.00 4.40
2743 2805 0.532862 CCTCTCATTACGCCGGCATT 60.533 55.000 28.98 15.55 0.00 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
518 519 1.651730 CGCTCGATCCGTTCTCGTC 60.652 63.158 0.00 0.00 37.40 4.20
601 603 8.337532 TCGTTCGACGTTCTGATAAAGATATTA 58.662 33.333 0.00 0.00 43.14 0.98
602 604 7.191551 TCGTTCGACGTTCTGATAAAGATATT 58.808 34.615 0.00 0.00 43.14 1.28
603 605 6.722301 TCGTTCGACGTTCTGATAAAGATAT 58.278 36.000 0.00 0.00 43.14 1.63
605 607 4.978186 TCGTTCGACGTTCTGATAAAGAT 58.022 39.130 0.00 0.00 43.14 2.40
612 614 1.854126 GGTTTTCGTTCGACGTTCTGA 59.146 47.619 0.00 0.00 43.14 3.27
613 615 1.856597 AGGTTTTCGTTCGACGTTCTG 59.143 47.619 0.00 0.00 43.14 3.02
614 616 2.214387 AGGTTTTCGTTCGACGTTCT 57.786 45.000 0.00 0.00 43.14 3.01
615 617 2.598205 CCAAGGTTTTCGTTCGACGTTC 60.598 50.000 0.00 0.00 43.14 3.95
616 618 1.328374 CCAAGGTTTTCGTTCGACGTT 59.672 47.619 0.00 0.00 43.14 3.99
617 619 0.932399 CCAAGGTTTTCGTTCGACGT 59.068 50.000 0.00 0.00 43.14 4.34
618 620 0.233848 CCCAAGGTTTTCGTTCGACG 59.766 55.000 0.00 0.00 44.19 5.12
619 621 0.040692 GCCCAAGGTTTTCGTTCGAC 60.041 55.000 0.00 0.00 0.00 4.20
620 622 0.464013 TGCCCAAGGTTTTCGTTCGA 60.464 50.000 0.00 0.00 0.00 3.71
621 623 0.596082 ATGCCCAAGGTTTTCGTTCG 59.404 50.000 0.00 0.00 0.00 3.95
622 624 1.934849 GCATGCCCAAGGTTTTCGTTC 60.935 52.381 6.36 0.00 0.00 3.95
623 625 0.033366 GCATGCCCAAGGTTTTCGTT 59.967 50.000 6.36 0.00 0.00 3.85
624 626 1.665442 GCATGCCCAAGGTTTTCGT 59.335 52.632 6.36 0.00 0.00 3.85
625 627 1.079888 GGCATGCCCAAGGTTTTCG 60.080 57.895 27.24 0.00 0.00 3.46
636 638 4.479993 ACGCTGAGAGGGCATGCC 62.480 66.667 29.47 29.47 0.00 4.40
637 639 3.200593 CACGCTGAGAGGGCATGC 61.201 66.667 9.90 9.90 0.00 4.06
638 640 3.200593 GCACGCTGAGAGGGCATG 61.201 66.667 5.31 0.00 0.00 4.06
639 641 3.397439 AGCACGCTGAGAGGGCAT 61.397 61.111 13.98 0.00 0.00 4.40
640 642 4.383861 CAGCACGCTGAGAGGGCA 62.384 66.667 13.98 0.00 46.30 5.36
641 643 4.385405 ACAGCACGCTGAGAGGGC 62.385 66.667 25.09 0.93 46.30 5.19
642 644 2.125753 GACAGCACGCTGAGAGGG 60.126 66.667 25.09 0.00 46.30 4.30
643 645 0.735632 GAAGACAGCACGCTGAGAGG 60.736 60.000 25.09 0.00 46.30 3.69
644 646 0.038801 TGAAGACAGCACGCTGAGAG 60.039 55.000 25.09 0.00 46.30 3.20
645 647 0.038801 CTGAAGACAGCACGCTGAGA 60.039 55.000 25.09 3.56 46.30 3.27
646 648 0.038801 TCTGAAGACAGCACGCTGAG 60.039 55.000 25.09 11.60 46.30 3.35
647 649 0.605083 ATCTGAAGACAGCACGCTGA 59.395 50.000 25.09 1.36 46.30 4.26
649 651 0.605083 TGATCTGAAGACAGCACGCT 59.395 50.000 0.00 0.00 43.17 5.07
650 652 0.718343 GTGATCTGAAGACAGCACGC 59.282 55.000 0.00 0.00 43.17 5.34
651 653 1.354040 GGTGATCTGAAGACAGCACG 58.646 55.000 0.00 0.00 43.17 5.34
652 654 1.731720 GGGTGATCTGAAGACAGCAC 58.268 55.000 0.00 0.00 43.17 4.40
653 655 0.247460 CGGGTGATCTGAAGACAGCA 59.753 55.000 0.00 0.00 43.17 4.41
654 656 0.460987 CCGGGTGATCTGAAGACAGC 60.461 60.000 0.00 0.00 43.17 4.40
655 657 1.135915 CTCCGGGTGATCTGAAGACAG 59.864 57.143 0.00 0.00 44.66 3.51
656 658 1.186200 CTCCGGGTGATCTGAAGACA 58.814 55.000 0.00 0.00 0.00 3.41
657 659 1.475403 TCTCCGGGTGATCTGAAGAC 58.525 55.000 0.00 0.00 0.00 3.01
658 660 2.034878 CATCTCCGGGTGATCTGAAGA 58.965 52.381 8.58 0.00 0.00 2.87
659 661 2.034878 TCATCTCCGGGTGATCTGAAG 58.965 52.381 8.58 0.00 0.00 3.02
660 662 2.159179 TCATCTCCGGGTGATCTGAA 57.841 50.000 8.58 0.00 0.00 3.02
661 663 2.388526 ATCATCTCCGGGTGATCTGA 57.611 50.000 8.58 6.72 29.36 3.27
662 664 2.289320 GGAATCATCTCCGGGTGATCTG 60.289 54.545 15.16 1.42 34.14 2.90
663 665 1.974236 GGAATCATCTCCGGGTGATCT 59.026 52.381 15.16 8.25 34.14 2.75
664 666 1.694150 TGGAATCATCTCCGGGTGATC 59.306 52.381 15.16 10.25 38.44 2.92
665 667 1.806496 TGGAATCATCTCCGGGTGAT 58.194 50.000 0.00 5.78 38.44 3.06
666 668 1.806496 ATGGAATCATCTCCGGGTGA 58.194 50.000 0.00 4.44 38.44 4.02
667 669 3.403038 GTTATGGAATCATCTCCGGGTG 58.597 50.000 0.00 0.00 38.44 4.61
668 670 2.372172 GGTTATGGAATCATCTCCGGGT 59.628 50.000 0.00 0.00 38.44 5.28
669 671 2.639839 AGGTTATGGAATCATCTCCGGG 59.360 50.000 0.00 0.00 38.44 5.73
670 672 3.071602 ACAGGTTATGGAATCATCTCCGG 59.928 47.826 0.00 0.00 38.44 5.14
671 673 4.342862 ACAGGTTATGGAATCATCTCCG 57.657 45.455 0.00 0.00 38.44 4.63
672 674 6.360618 AGAAACAGGTTATGGAATCATCTCC 58.639 40.000 0.00 0.00 34.96 3.71
673 675 6.201806 CGAGAAACAGGTTATGGAATCATCTC 59.798 42.308 0.00 0.00 34.96 2.75
674 676 6.051717 CGAGAAACAGGTTATGGAATCATCT 58.948 40.000 0.00 0.00 34.96 2.90
675 677 5.817816 ACGAGAAACAGGTTATGGAATCATC 59.182 40.000 0.00 0.00 34.96 2.92
676 678 5.586243 CACGAGAAACAGGTTATGGAATCAT 59.414 40.000 0.00 0.00 37.40 2.45
677 679 4.935205 CACGAGAAACAGGTTATGGAATCA 59.065 41.667 0.00 0.00 0.00 2.57
678 680 5.175859 TCACGAGAAACAGGTTATGGAATC 58.824 41.667 0.00 0.00 0.00 2.52
679 681 5.160607 TCACGAGAAACAGGTTATGGAAT 57.839 39.130 0.00 0.00 0.00 3.01
680 682 4.562757 CCTCACGAGAAACAGGTTATGGAA 60.563 45.833 0.00 0.00 0.00 3.53
681 683 3.056107 CCTCACGAGAAACAGGTTATGGA 60.056 47.826 0.00 0.00 0.00 3.41
682 684 3.262420 CCTCACGAGAAACAGGTTATGG 58.738 50.000 0.00 0.00 0.00 2.74
683 685 2.673368 GCCTCACGAGAAACAGGTTATG 59.327 50.000 0.00 0.00 0.00 1.90
684 686 2.567615 AGCCTCACGAGAAACAGGTTAT 59.432 45.455 0.00 0.00 0.00 1.89
685 687 1.968493 AGCCTCACGAGAAACAGGTTA 59.032 47.619 0.00 0.00 0.00 2.85
686 688 0.759346 AGCCTCACGAGAAACAGGTT 59.241 50.000 0.00 0.00 0.00 3.50
687 689 0.318762 GAGCCTCACGAGAAACAGGT 59.681 55.000 0.00 0.00 0.00 4.00
688 690 0.605589 AGAGCCTCACGAGAAACAGG 59.394 55.000 0.00 0.00 0.00 4.00
689 691 1.730772 CGAGAGCCTCACGAGAAACAG 60.731 57.143 5.58 0.00 32.24 3.16
690 692 0.241213 CGAGAGCCTCACGAGAAACA 59.759 55.000 5.58 0.00 32.24 2.83
691 693 0.241481 ACGAGAGCCTCACGAGAAAC 59.759 55.000 18.31 0.00 34.62 2.78
692 694 0.522180 GACGAGAGCCTCACGAGAAA 59.478 55.000 18.31 0.00 34.62 2.52
693 695 0.321741 AGACGAGAGCCTCACGAGAA 60.322 55.000 18.31 0.00 34.62 2.87
694 696 1.021920 CAGACGAGAGCCTCACGAGA 61.022 60.000 18.31 0.00 34.62 4.04
695 697 1.302383 ACAGACGAGAGCCTCACGAG 61.302 60.000 18.31 9.60 34.62 4.18
696 698 0.889638 AACAGACGAGAGCCTCACGA 60.890 55.000 18.31 0.00 34.62 4.35
697 699 0.803117 TAACAGACGAGAGCCTCACG 59.197 55.000 10.05 10.05 36.55 4.35
698 700 1.540267 TGTAACAGACGAGAGCCTCAC 59.460 52.381 0.00 0.00 0.00 3.51
699 701 1.905637 TGTAACAGACGAGAGCCTCA 58.094 50.000 0.00 0.00 0.00 3.86
700 702 2.869897 CTTGTAACAGACGAGAGCCTC 58.130 52.381 0.00 0.00 41.66 4.70
731 733 6.282930 CAAAGAGGCAAAAGATCAAGGAAAA 58.717 36.000 0.00 0.00 0.00 2.29
732 734 5.221501 CCAAAGAGGCAAAAGATCAAGGAAA 60.222 40.000 0.00 0.00 0.00 3.13
762 764 6.041069 GGGTAGATCTACTACTCTGCAAATGT 59.959 42.308 27.68 0.00 46.03 2.71
793 795 6.258287 ACACTCTCACTGCTATTACTACTACG 59.742 42.308 0.00 0.00 0.00 3.51
794 796 7.066043 ACACACTCTCACTGCTATTACTACTAC 59.934 40.741 0.00 0.00 0.00 2.73
795 797 7.110810 ACACACTCTCACTGCTATTACTACTA 58.889 38.462 0.00 0.00 0.00 1.82
796 798 5.946972 ACACACTCTCACTGCTATTACTACT 59.053 40.000 0.00 0.00 0.00 2.57
797 799 6.197364 ACACACTCTCACTGCTATTACTAC 57.803 41.667 0.00 0.00 0.00 2.73
798 800 5.357314 GGACACACTCTCACTGCTATTACTA 59.643 44.000 0.00 0.00 0.00 1.82
799 801 4.158764 GGACACACTCTCACTGCTATTACT 59.841 45.833 0.00 0.00 0.00 2.24
800 802 4.082190 TGGACACACTCTCACTGCTATTAC 60.082 45.833 0.00 0.00 0.00 1.89
801 803 4.086457 TGGACACACTCTCACTGCTATTA 58.914 43.478 0.00 0.00 0.00 0.98
802 804 2.899900 TGGACACACTCTCACTGCTATT 59.100 45.455 0.00 0.00 0.00 1.73
819 821 0.882927 TTACGGTTGTGCTGCTGGAC 60.883 55.000 8.33 8.33 34.96 4.02
820 822 0.882927 GTTACGGTTGTGCTGCTGGA 60.883 55.000 0.00 0.00 0.00 3.86
821 823 1.163420 TGTTACGGTTGTGCTGCTGG 61.163 55.000 0.00 0.00 0.00 4.85
822 824 0.235665 CTGTTACGGTTGTGCTGCTG 59.764 55.000 0.00 0.00 0.00 4.41
823 825 0.105964 TCTGTTACGGTTGTGCTGCT 59.894 50.000 0.00 0.00 0.00 4.24
824 826 0.512952 CTCTGTTACGGTTGTGCTGC 59.487 55.000 0.00 0.00 0.00 5.25
825 827 2.148916 TCTCTGTTACGGTTGTGCTG 57.851 50.000 0.00 0.00 0.00 4.41
826 828 2.870411 GTTTCTCTGTTACGGTTGTGCT 59.130 45.455 0.00 0.00 0.00 4.40
827 829 2.610374 TGTTTCTCTGTTACGGTTGTGC 59.390 45.455 0.00 0.00 0.00 4.57
828 830 3.869246 AGTGTTTCTCTGTTACGGTTGTG 59.131 43.478 0.00 0.00 0.00 3.33
829 831 4.117685 GAGTGTTTCTCTGTTACGGTTGT 58.882 43.478 0.00 0.00 39.86 3.32
830 832 3.181774 CGAGTGTTTCTCTGTTACGGTTG 59.818 47.826 0.00 0.00 40.75 3.77
831 833 3.181483 ACGAGTGTTTCTCTGTTACGGTT 60.181 43.478 0.00 0.00 40.75 4.44
832 834 2.360165 ACGAGTGTTTCTCTGTTACGGT 59.640 45.455 0.00 0.00 40.75 4.83
833 835 3.009301 ACGAGTGTTTCTCTGTTACGG 57.991 47.619 0.00 0.00 40.75 4.02
834 836 3.361724 GCAACGAGTGTTTCTCTGTTACG 60.362 47.826 0.00 0.00 40.75 3.18
835 837 3.554324 TGCAACGAGTGTTTCTCTGTTAC 59.446 43.478 0.00 0.00 40.75 2.50
839 841 3.548587 CATTGCAACGAGTGTTTCTCTG 58.451 45.455 0.00 0.00 40.75 3.35
844 846 1.838913 GTGCATTGCAACGAGTGTTT 58.161 45.000 13.94 0.00 41.47 2.83
852 854 1.371635 GACCACCGTGCATTGCAAC 60.372 57.895 13.94 7.00 41.47 4.17
856 858 0.884259 TGAGTGACCACCGTGCATTG 60.884 55.000 0.00 0.00 0.00 2.82
904 906 2.423577 GAGGCTCGTACAAACACCATT 58.576 47.619 0.00 0.00 0.00 3.16
913 915 1.919240 TTTCTCAGGAGGCTCGTACA 58.081 50.000 9.71 0.00 0.00 2.90
939 941 0.395311 ATGCCCAGCCACAGATGAAG 60.395 55.000 0.00 0.00 0.00 3.02
958 960 4.063967 CGTCGGCCAGGTGTAGCA 62.064 66.667 2.24 0.00 0.00 3.49
990 992 1.023513 GGGACTGCATGTCTCTGCAC 61.024 60.000 13.59 0.21 46.76 4.57
1014 1016 2.646719 CGTTGAGACGGGACCGAA 59.353 61.111 18.80 0.00 45.32 4.30
1075 1077 3.003480 GGTTATAATGGCGGATGCTCTC 58.997 50.000 0.00 0.00 42.25 3.20
1108 1117 4.389576 CAGTTGCTTGGCCGACGC 62.390 66.667 0.00 2.66 0.00 5.19
1109 1118 4.389576 GCAGTTGCTTGGCCGACG 62.390 66.667 0.00 0.00 38.21 5.12
1156 1165 0.387622 TTAGCTTCGTCCGTTCCACG 60.388 55.000 0.00 0.00 42.11 4.94
1723 1732 4.223032 AGATCACTTGACGAGGTTGGTAAT 59.777 41.667 0.00 0.00 0.00 1.89
1735 1744 2.349886 GACAATGCGGAGATCACTTGAC 59.650 50.000 0.00 0.00 0.00 3.18
1756 1770 4.436998 GGACACCTCGACGGGCAG 62.437 72.222 0.00 0.00 36.97 4.85
1838 1868 2.416431 CGTACCACTACCACTAAGTGCC 60.416 54.545 0.00 0.00 42.47 5.01
1843 1873 2.778299 ACGTCGTACCACTACCACTAA 58.222 47.619 0.00 0.00 0.00 2.24
1854 1888 2.412421 ACAGTGAAGAACGTCGTACC 57.588 50.000 0.00 0.00 0.00 3.34
1870 1904 1.860950 CTTCTGACACCGACACAACAG 59.139 52.381 0.00 0.00 0.00 3.16
1880 1914 5.869344 GCAATTTTTATTCCCTTCTGACACC 59.131 40.000 0.00 0.00 0.00 4.16
1899 1938 9.729281 AAACCAGATGAAAAAGATAATGCAATT 57.271 25.926 0.00 0.00 41.28 2.32
1921 1961 3.994392 TGAAACGAGCAGATCTGTAAACC 59.006 43.478 23.38 6.87 0.00 3.27
1989 2033 1.885850 GCGGAAAGTGACACACCGT 60.886 57.895 26.71 5.67 44.48 4.83
2010 2062 0.956902 AGACGCCGCCGGTTATTTTT 60.957 50.000 4.45 0.00 39.22 1.94
2127 2187 4.934001 TCAGTGCAATTCAGATCTCAGAAC 59.066 41.667 0.00 0.00 0.00 3.01
2186 2248 3.035363 TCTGGCCGTACTCCATTTCATA 58.965 45.455 0.00 0.00 32.37 2.15
2188 2250 1.207089 CTCTGGCCGTACTCCATTTCA 59.793 52.381 0.00 0.00 32.37 2.69
2192 2254 1.762460 CCCTCTGGCCGTACTCCAT 60.762 63.158 0.00 0.00 32.37 3.41
2193 2255 2.363795 CCCTCTGGCCGTACTCCA 60.364 66.667 0.00 4.05 0.00 3.86
2195 2257 2.043248 TCCCCTCTGGCCGTACTC 60.043 66.667 0.00 0.00 0.00 2.59
2196 2258 2.042843 CTCCCCTCTGGCCGTACT 60.043 66.667 0.00 0.00 0.00 2.73
2197 2259 3.155167 CCTCCCCTCTGGCCGTAC 61.155 72.222 0.00 0.00 0.00 3.67
2198 2260 3.352748 TCCTCCCCTCTGGCCGTA 61.353 66.667 0.00 0.00 0.00 4.02
2216 2278 1.471287 CATGGACAATGACAGCACTGG 59.529 52.381 2.21 0.00 38.72 4.00
2302 2364 2.009051 CTGATTGATAGCGGCAACACA 58.991 47.619 1.45 0.00 0.00 3.72
2311 2373 1.795286 GCGCTGTACCTGATTGATAGC 59.205 52.381 0.00 0.00 0.00 2.97
2388 2450 3.695606 GCGGGCAGTGGAGACTCA 61.696 66.667 4.53 0.00 0.00 3.41
2400 2462 2.357760 TGTCTTAACGGTGCGGGC 60.358 61.111 0.00 0.00 0.00 6.13
2401 2463 0.244450 TAGTGTCTTAACGGTGCGGG 59.756 55.000 0.00 0.00 0.00 6.13
2402 2464 2.068837 TTAGTGTCTTAACGGTGCGG 57.931 50.000 0.00 0.00 0.00 5.69
2403 2465 2.347452 CCATTAGTGTCTTAACGGTGCG 59.653 50.000 0.00 0.00 0.00 5.34
2404 2466 2.095372 GCCATTAGTGTCTTAACGGTGC 59.905 50.000 0.00 0.00 0.00 5.01
2405 2467 3.331150 TGCCATTAGTGTCTTAACGGTG 58.669 45.455 0.00 0.00 0.00 4.94
2406 2468 3.688694 TGCCATTAGTGTCTTAACGGT 57.311 42.857 0.00 0.00 0.00 4.83
2407 2469 4.442706 AGATGCCATTAGTGTCTTAACGG 58.557 43.478 0.00 0.00 0.00 4.44
2408 2470 4.508124 GGAGATGCCATTAGTGTCTTAACG 59.492 45.833 0.00 0.00 36.34 3.18
2409 2471 5.428253 TGGAGATGCCATTAGTGTCTTAAC 58.572 41.667 0.00 0.00 43.33 2.01
2410 2472 5.692115 TGGAGATGCCATTAGTGTCTTAA 57.308 39.130 0.00 0.00 43.33 1.85
2424 2486 2.750888 GGTTCGGCGTTGGAGATGC 61.751 63.158 6.85 0.00 39.65 3.91
2425 2487 1.079127 AGGTTCGGCGTTGGAGATG 60.079 57.895 6.85 0.00 0.00 2.90
2426 2488 1.218316 GAGGTTCGGCGTTGGAGAT 59.782 57.895 6.85 0.00 0.00 2.75
2427 2489 2.654877 GAGGTTCGGCGTTGGAGA 59.345 61.111 6.85 0.00 0.00 3.71
2428 2490 2.434359 GGAGGTTCGGCGTTGGAG 60.434 66.667 6.85 0.00 0.00 3.86
2429 2491 4.367023 CGGAGGTTCGGCGTTGGA 62.367 66.667 6.85 0.00 0.00 3.53
2430 2492 4.367023 TCGGAGGTTCGGCGTTGG 62.367 66.667 6.85 0.00 0.00 3.77
2431 2493 3.110178 GTCGGAGGTTCGGCGTTG 61.110 66.667 6.85 0.00 0.00 4.10
2432 2494 4.368543 GGTCGGAGGTTCGGCGTT 62.369 66.667 6.85 0.00 35.34 4.84
2435 2497 4.754667 GGTGGTCGGAGGTTCGGC 62.755 72.222 0.00 0.00 0.00 5.54
2436 2498 4.078516 GGGTGGTCGGAGGTTCGG 62.079 72.222 0.00 0.00 0.00 4.30
2437 2499 4.430765 CGGGTGGTCGGAGGTTCG 62.431 72.222 0.00 0.00 0.00 3.95
2438 2500 4.754667 GCGGGTGGTCGGAGGTTC 62.755 72.222 0.00 0.00 0.00 3.62
2440 2502 3.968837 TATGCGGGTGGTCGGAGGT 62.969 63.158 0.00 0.00 33.32 3.85
2441 2503 3.151710 TATGCGGGTGGTCGGAGG 61.152 66.667 0.00 0.00 33.32 4.30
2442 2504 2.028125 ATGTATGCGGGTGGTCGGAG 62.028 60.000 0.00 0.00 33.32 4.63
2443 2505 2.023414 GATGTATGCGGGTGGTCGGA 62.023 60.000 0.00 0.00 34.52 4.55
2444 2506 1.594293 GATGTATGCGGGTGGTCGG 60.594 63.158 0.00 0.00 0.00 4.79
2445 2507 0.875908 CTGATGTATGCGGGTGGTCG 60.876 60.000 0.00 0.00 0.00 4.79
2446 2508 0.532862 CCTGATGTATGCGGGTGGTC 60.533 60.000 0.00 0.00 0.00 4.02
2447 2509 0.980754 TCCTGATGTATGCGGGTGGT 60.981 55.000 0.00 0.00 33.40 4.16
2448 2510 0.532862 GTCCTGATGTATGCGGGTGG 60.533 60.000 0.00 0.00 33.40 4.61
2449 2511 0.532862 GGTCCTGATGTATGCGGGTG 60.533 60.000 0.00 0.00 33.40 4.61
2450 2512 1.830145 GGTCCTGATGTATGCGGGT 59.170 57.895 0.00 0.00 33.40 5.28
2451 2513 1.300931 CGGTCCTGATGTATGCGGG 60.301 63.158 0.00 0.00 0.00 6.13
2452 2514 0.875908 CACGGTCCTGATGTATGCGG 60.876 60.000 0.00 0.00 0.00 5.69
2453 2515 0.875908 CCACGGTCCTGATGTATGCG 60.876 60.000 0.00 0.00 0.00 4.73
2454 2516 0.532862 CCCACGGTCCTGATGTATGC 60.533 60.000 0.00 0.00 0.00 3.14
2455 2517 0.106708 CCCCACGGTCCTGATGTATG 59.893 60.000 0.00 0.00 0.00 2.39
2456 2518 1.696097 GCCCCACGGTCCTGATGTAT 61.696 60.000 0.00 0.00 0.00 2.29
2457 2519 2.363975 GCCCCACGGTCCTGATGTA 61.364 63.158 0.00 0.00 0.00 2.29
2458 2520 3.717294 GCCCCACGGTCCTGATGT 61.717 66.667 0.00 0.00 0.00 3.06
2459 2521 4.489771 GGCCCCACGGTCCTGATG 62.490 72.222 0.00 0.00 0.00 3.07
2460 2522 4.741239 AGGCCCCACGGTCCTGAT 62.741 66.667 0.00 0.00 35.20 2.90
2463 2525 4.326227 TACAGGCCCCACGGTCCT 62.326 66.667 0.00 0.00 36.45 3.85
2464 2526 4.091939 GTACAGGCCCCACGGTCC 62.092 72.222 0.00 0.00 32.27 4.46
2465 2527 4.446413 CGTACAGGCCCCACGGTC 62.446 72.222 12.30 0.00 32.19 4.79
2467 2529 4.752879 CACGTACAGGCCCCACGG 62.753 72.222 21.18 9.73 39.91 4.94
2468 2530 2.999739 AAACACGTACAGGCCCCACG 63.000 60.000 17.12 17.12 41.32 4.94
2469 2531 0.820482 AAAACACGTACAGGCCCCAC 60.820 55.000 0.00 0.00 0.00 4.61
2470 2532 0.820074 CAAAACACGTACAGGCCCCA 60.820 55.000 0.00 0.00 0.00 4.96
2471 2533 0.820482 ACAAAACACGTACAGGCCCC 60.820 55.000 0.00 0.00 0.00 5.80
2472 2534 0.589708 GACAAAACACGTACAGGCCC 59.410 55.000 0.00 0.00 0.00 5.80
2473 2535 1.301423 TGACAAAACACGTACAGGCC 58.699 50.000 0.00 0.00 0.00 5.19
2474 2536 2.095919 GGATGACAAAACACGTACAGGC 60.096 50.000 0.00 0.00 0.00 4.85
2475 2537 3.135225 TGGATGACAAAACACGTACAGG 58.865 45.455 0.00 0.00 0.00 4.00
2476 2538 3.363970 GCTGGATGACAAAACACGTACAG 60.364 47.826 0.00 0.00 0.00 2.74
2477 2539 2.546368 GCTGGATGACAAAACACGTACA 59.454 45.455 0.00 0.00 0.00 2.90
2478 2540 2.806244 AGCTGGATGACAAAACACGTAC 59.194 45.455 0.00 0.00 0.00 3.67
2479 2541 3.120321 AGCTGGATGACAAAACACGTA 57.880 42.857 0.00 0.00 0.00 3.57
2480 2542 1.967319 AGCTGGATGACAAAACACGT 58.033 45.000 0.00 0.00 0.00 4.49
2481 2543 2.290367 TCAAGCTGGATGACAAAACACG 59.710 45.455 0.00 0.00 0.00 4.49
2482 2544 3.988379 TCAAGCTGGATGACAAAACAC 57.012 42.857 0.00 0.00 0.00 3.32
2483 2545 3.068024 GGTTCAAGCTGGATGACAAAACA 59.932 43.478 0.00 0.00 0.00 2.83
2484 2546 3.319122 AGGTTCAAGCTGGATGACAAAAC 59.681 43.478 0.00 0.00 0.00 2.43
2485 2547 3.318839 CAGGTTCAAGCTGGATGACAAAA 59.681 43.478 8.86 0.00 39.87 2.44
2486 2548 2.886523 CAGGTTCAAGCTGGATGACAAA 59.113 45.455 8.86 0.00 39.87 2.83
2487 2549 2.507484 CAGGTTCAAGCTGGATGACAA 58.493 47.619 8.86 0.00 39.87 3.18
2488 2550 2.189594 CAGGTTCAAGCTGGATGACA 57.810 50.000 8.86 0.00 39.87 3.58
2489 2551 3.878778 ATACAGGTTCAAGCTGGATGAC 58.121 45.455 20.49 0.00 44.95 3.06
2490 2552 4.264253 CAATACAGGTTCAAGCTGGATGA 58.736 43.478 15.27 0.45 45.87 2.92
2491 2553 3.379372 CCAATACAGGTTCAAGCTGGATG 59.621 47.826 15.27 12.19 45.87 3.51
2496 2558 2.615493 CGGACCAATACAGGTTCAAGCT 60.615 50.000 0.00 0.00 43.38 3.74
2497 2559 1.737793 CGGACCAATACAGGTTCAAGC 59.262 52.381 0.00 0.00 43.38 4.01
2498 2560 3.053831 ACGGACCAATACAGGTTCAAG 57.946 47.619 0.00 0.00 43.38 3.02
2499 2561 3.404899 GAACGGACCAATACAGGTTCAA 58.595 45.455 0.00 0.00 43.38 2.69
2500 2562 2.610976 CGAACGGACCAATACAGGTTCA 60.611 50.000 6.88 0.00 43.38 3.18
2501 2563 1.997606 CGAACGGACCAATACAGGTTC 59.002 52.381 0.00 0.00 43.38 3.62
2502 2564 1.619827 TCGAACGGACCAATACAGGTT 59.380 47.619 0.00 0.00 43.38 3.50
2503 2565 1.067354 GTCGAACGGACCAATACAGGT 60.067 52.381 0.00 0.00 46.82 4.00
2504 2566 1.636988 GTCGAACGGACCAATACAGG 58.363 55.000 0.00 0.00 39.90 4.00
2505 2567 1.265568 CGTCGAACGGACCAATACAG 58.734 55.000 0.00 0.00 42.99 2.74
2506 2568 3.404978 CGTCGAACGGACCAATACA 57.595 52.632 0.00 0.00 42.99 2.29
2516 2578 1.793613 GTGTCCGTACCGTCGAACG 60.794 63.158 11.62 11.62 42.11 3.95
2517 2579 0.998727 GTGTGTCCGTACCGTCGAAC 60.999 60.000 0.00 0.00 0.00 3.95
2518 2580 1.165907 AGTGTGTCCGTACCGTCGAA 61.166 55.000 0.00 0.00 0.00 3.71
2519 2581 1.165907 AAGTGTGTCCGTACCGTCGA 61.166 55.000 0.00 0.00 0.00 4.20
2520 2582 0.318107 AAAGTGTGTCCGTACCGTCG 60.318 55.000 0.00 0.00 0.00 5.12
2521 2583 1.000938 AGAAAGTGTGTCCGTACCGTC 60.001 52.381 0.00 0.00 0.00 4.79
2522 2584 1.035139 AGAAAGTGTGTCCGTACCGT 58.965 50.000 0.00 0.00 0.00 4.83
2523 2585 2.227388 AGTAGAAAGTGTGTCCGTACCG 59.773 50.000 0.00 0.00 0.00 4.02
2524 2586 3.930634 AGTAGAAAGTGTGTCCGTACC 57.069 47.619 0.00 0.00 0.00 3.34
2525 2587 7.530010 TGTATTAGTAGAAAGTGTGTCCGTAC 58.470 38.462 0.00 0.00 0.00 3.67
2526 2588 7.686438 TGTATTAGTAGAAAGTGTGTCCGTA 57.314 36.000 0.00 0.00 0.00 4.02
2527 2589 6.579666 TGTATTAGTAGAAAGTGTGTCCGT 57.420 37.500 0.00 0.00 0.00 4.69
2528 2590 7.597743 AGTTTGTATTAGTAGAAAGTGTGTCCG 59.402 37.037 0.00 0.00 28.71 4.79
2529 2591 8.828688 AGTTTGTATTAGTAGAAAGTGTGTCC 57.171 34.615 0.00 0.00 28.71 4.02
2536 2598 9.738832 GCTCCTCTAGTTTGTATTAGTAGAAAG 57.261 37.037 0.00 0.00 29.59 2.62
2537 2599 9.251440 TGCTCCTCTAGTTTGTATTAGTAGAAA 57.749 33.333 0.00 0.00 29.59 2.52
2538 2600 8.818622 TGCTCCTCTAGTTTGTATTAGTAGAA 57.181 34.615 0.00 0.00 29.59 2.10
2539 2601 8.053963 ACTGCTCCTCTAGTTTGTATTAGTAGA 58.946 37.037 0.00 0.00 0.00 2.59
2540 2602 8.228035 ACTGCTCCTCTAGTTTGTATTAGTAG 57.772 38.462 0.00 0.00 0.00 2.57
2541 2603 9.863650 ATACTGCTCCTCTAGTTTGTATTAGTA 57.136 33.333 0.00 0.00 0.00 1.82
2542 2604 8.634444 CATACTGCTCCTCTAGTTTGTATTAGT 58.366 37.037 0.00 0.00 0.00 2.24
2543 2605 8.085296 CCATACTGCTCCTCTAGTTTGTATTAG 58.915 40.741 0.00 0.00 0.00 1.73
2544 2606 7.783119 TCCATACTGCTCCTCTAGTTTGTATTA 59.217 37.037 0.00 0.00 0.00 0.98
2545 2607 6.611642 TCCATACTGCTCCTCTAGTTTGTATT 59.388 38.462 0.00 0.00 0.00 1.89
2546 2608 6.041069 GTCCATACTGCTCCTCTAGTTTGTAT 59.959 42.308 0.00 0.00 0.00 2.29
2547 2609 5.360144 GTCCATACTGCTCCTCTAGTTTGTA 59.640 44.000 0.00 0.00 0.00 2.41
2548 2610 4.160626 GTCCATACTGCTCCTCTAGTTTGT 59.839 45.833 0.00 0.00 0.00 2.83
2549 2611 4.688021 GTCCATACTGCTCCTCTAGTTTG 58.312 47.826 0.00 0.00 0.00 2.93
2550 2612 3.381908 CGTCCATACTGCTCCTCTAGTTT 59.618 47.826 0.00 0.00 0.00 2.66
2551 2613 2.952978 CGTCCATACTGCTCCTCTAGTT 59.047 50.000 0.00 0.00 0.00 2.24
2552 2614 2.092321 ACGTCCATACTGCTCCTCTAGT 60.092 50.000 0.00 0.00 0.00 2.57
2553 2615 2.577700 ACGTCCATACTGCTCCTCTAG 58.422 52.381 0.00 0.00 0.00 2.43
2554 2616 2.730934 ACGTCCATACTGCTCCTCTA 57.269 50.000 0.00 0.00 0.00 2.43
2555 2617 1.751924 GAACGTCCATACTGCTCCTCT 59.248 52.381 0.00 0.00 0.00 3.69
2556 2618 1.476891 TGAACGTCCATACTGCTCCTC 59.523 52.381 0.00 0.00 0.00 3.71
2557 2619 1.478510 CTGAACGTCCATACTGCTCCT 59.521 52.381 0.00 0.00 0.00 3.69
2558 2620 1.476891 TCTGAACGTCCATACTGCTCC 59.523 52.381 0.00 0.00 0.00 4.70
2559 2621 2.094700 TGTCTGAACGTCCATACTGCTC 60.095 50.000 0.00 0.00 0.00 4.26
2560 2622 1.893137 TGTCTGAACGTCCATACTGCT 59.107 47.619 0.00 0.00 0.00 4.24
2561 2623 2.263077 CTGTCTGAACGTCCATACTGC 58.737 52.381 0.00 0.00 0.00 4.40
2562 2624 2.263077 GCTGTCTGAACGTCCATACTG 58.737 52.381 0.00 0.00 0.00 2.74
2563 2625 1.204941 GGCTGTCTGAACGTCCATACT 59.795 52.381 0.00 0.00 0.00 2.12
2564 2626 1.641577 GGCTGTCTGAACGTCCATAC 58.358 55.000 0.00 0.00 0.00 2.39
2565 2627 0.172578 CGGCTGTCTGAACGTCCATA 59.827 55.000 0.00 0.00 0.00 2.74
2566 2628 1.079819 CGGCTGTCTGAACGTCCAT 60.080 57.895 0.00 0.00 0.00 3.41
2567 2629 2.338620 CGGCTGTCTGAACGTCCA 59.661 61.111 0.00 0.00 0.00 4.02
2568 2630 2.209064 TAGCGGCTGTCTGAACGTCC 62.209 60.000 13.86 0.00 0.00 4.79
2569 2631 0.179134 ATAGCGGCTGTCTGAACGTC 60.179 55.000 13.86 0.00 0.00 4.34
2570 2632 0.458543 CATAGCGGCTGTCTGAACGT 60.459 55.000 13.86 0.00 0.00 3.99
2571 2633 1.756375 GCATAGCGGCTGTCTGAACG 61.756 60.000 13.86 0.00 0.00 3.95
2572 2634 1.432270 GGCATAGCGGCTGTCTGAAC 61.432 60.000 13.86 1.38 37.17 3.18
2573 2635 1.153369 GGCATAGCGGCTGTCTGAA 60.153 57.895 13.86 0.00 37.17 3.02
2574 2636 2.501128 GGCATAGCGGCTGTCTGA 59.499 61.111 13.86 0.00 37.17 3.27
2575 2637 2.590007 GGGCATAGCGGCTGTCTG 60.590 66.667 13.86 8.58 40.90 3.51
2576 2638 4.227134 CGGGCATAGCGGCTGTCT 62.227 66.667 13.86 0.00 41.66 3.41
2584 2646 3.564027 GTCACACGCGGGCATAGC 61.564 66.667 9.12 0.00 0.00 2.97
2585 2647 2.890474 GGTCACACGCGGGCATAG 60.890 66.667 9.12 0.00 0.00 2.23
2586 2648 2.916502 GATGGTCACACGCGGGCATA 62.917 60.000 9.12 0.00 0.00 3.14
2587 2649 4.408821 ATGGTCACACGCGGGCAT 62.409 61.111 9.12 0.00 0.00 4.40
2590 2652 2.233605 TTAGGATGGTCACACGCGGG 62.234 60.000 6.92 6.92 0.00 6.13
2591 2653 1.082117 GTTAGGATGGTCACACGCGG 61.082 60.000 12.47 1.27 0.00 6.46
2592 2654 1.082117 GGTTAGGATGGTCACACGCG 61.082 60.000 3.53 3.53 0.00 6.01
2593 2655 0.743345 GGGTTAGGATGGTCACACGC 60.743 60.000 0.00 0.00 0.00 5.34
2594 2656 0.611200 TGGGTTAGGATGGTCACACG 59.389 55.000 0.00 0.00 0.00 4.49
2595 2657 2.238646 TGATGGGTTAGGATGGTCACAC 59.761 50.000 0.00 0.00 0.00 3.82
2596 2658 2.556766 TGATGGGTTAGGATGGTCACA 58.443 47.619 0.00 0.00 0.00 3.58
2597 2659 3.644966 TTGATGGGTTAGGATGGTCAC 57.355 47.619 0.00 0.00 0.00 3.67
2598 2660 4.666412 TTTTGATGGGTTAGGATGGTCA 57.334 40.909 0.00 0.00 0.00 4.02
2599 2661 5.069119 GGATTTTTGATGGGTTAGGATGGTC 59.931 44.000 0.00 0.00 0.00 4.02
2600 2662 4.962362 GGATTTTTGATGGGTTAGGATGGT 59.038 41.667 0.00 0.00 0.00 3.55
2601 2663 4.344968 GGGATTTTTGATGGGTTAGGATGG 59.655 45.833 0.00 0.00 0.00 3.51
2602 2664 4.344968 GGGGATTTTTGATGGGTTAGGATG 59.655 45.833 0.00 0.00 0.00 3.51
2603 2665 4.235164 AGGGGATTTTTGATGGGTTAGGAT 59.765 41.667 0.00 0.00 0.00 3.24
2604 2666 3.600617 AGGGGATTTTTGATGGGTTAGGA 59.399 43.478 0.00 0.00 0.00 2.94
2605 2667 3.994317 AGGGGATTTTTGATGGGTTAGG 58.006 45.455 0.00 0.00 0.00 2.69
2606 2668 5.272402 AGAAGGGGATTTTTGATGGGTTAG 58.728 41.667 0.00 0.00 0.00 2.34
2607 2669 5.283876 AGAAGGGGATTTTTGATGGGTTA 57.716 39.130 0.00 0.00 0.00 2.85
2608 2670 4.146245 AGAAGGGGATTTTTGATGGGTT 57.854 40.909 0.00 0.00 0.00 4.11
2609 2671 3.852858 AGAAGGGGATTTTTGATGGGT 57.147 42.857 0.00 0.00 0.00 4.51
2610 2672 3.131046 CGAAGAAGGGGATTTTTGATGGG 59.869 47.826 0.00 0.00 0.00 4.00
2611 2673 3.429410 GCGAAGAAGGGGATTTTTGATGG 60.429 47.826 0.00 0.00 0.00 3.51
2612 2674 3.445096 AGCGAAGAAGGGGATTTTTGATG 59.555 43.478 0.00 0.00 0.00 3.07
2613 2675 3.701664 AGCGAAGAAGGGGATTTTTGAT 58.298 40.909 0.00 0.00 0.00 2.57
2614 2676 3.154827 AGCGAAGAAGGGGATTTTTGA 57.845 42.857 0.00 0.00 0.00 2.69
2615 2677 3.942130 AAGCGAAGAAGGGGATTTTTG 57.058 42.857 0.00 0.00 0.00 2.44
2616 2678 4.217767 GTGTAAGCGAAGAAGGGGATTTTT 59.782 41.667 0.00 0.00 0.00 1.94
2617 2679 3.756963 GTGTAAGCGAAGAAGGGGATTTT 59.243 43.478 0.00 0.00 0.00 1.82
2618 2680 3.344515 GTGTAAGCGAAGAAGGGGATTT 58.655 45.455 0.00 0.00 0.00 2.17
2619 2681 2.677037 CGTGTAAGCGAAGAAGGGGATT 60.677 50.000 0.00 0.00 0.00 3.01
2620 2682 1.134788 CGTGTAAGCGAAGAAGGGGAT 60.135 52.381 0.00 0.00 0.00 3.85
2621 2683 0.245539 CGTGTAAGCGAAGAAGGGGA 59.754 55.000 0.00 0.00 0.00 4.81
2622 2684 1.359459 GCGTGTAAGCGAAGAAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
2623 2685 0.389948 AGCGTGTAAGCGAAGAAGGG 60.390 55.000 0.00 0.00 43.00 3.95
2624 2686 1.429463 AAGCGTGTAAGCGAAGAAGG 58.571 50.000 0.00 0.00 43.00 3.46
2625 2687 3.059570 CAGTAAGCGTGTAAGCGAAGAAG 59.940 47.826 0.00 0.00 43.00 2.85
2626 2688 2.984471 CAGTAAGCGTGTAAGCGAAGAA 59.016 45.455 0.00 0.00 43.00 2.52
2627 2689 2.592194 CAGTAAGCGTGTAAGCGAAGA 58.408 47.619 0.00 0.00 43.00 2.87
2628 2690 1.059264 GCAGTAAGCGTGTAAGCGAAG 59.941 52.381 0.00 0.00 43.00 3.79
2629 2691 1.065358 GCAGTAAGCGTGTAAGCGAA 58.935 50.000 0.00 0.00 43.00 4.70
2630 2692 2.733127 GCAGTAAGCGTGTAAGCGA 58.267 52.632 0.00 0.00 43.00 4.93
2640 2702 4.715523 TGGCACCGGGCAGTAAGC 62.716 66.667 6.32 0.00 45.76 3.09
2647 2709 4.468689 GAGTAGGTGGCACCGGGC 62.469 72.222 29.76 22.31 44.90 6.13
2648 2710 3.000819 TGAGTAGGTGGCACCGGG 61.001 66.667 29.76 0.00 44.90 5.73
2649 2711 2.264794 GTGAGTAGGTGGCACCGG 59.735 66.667 29.76 0.00 44.90 5.28
2650 2712 1.079819 CTGTGAGTAGGTGGCACCG 60.080 63.158 29.76 10.19 44.90 4.94
2651 2713 0.037232 GACTGTGAGTAGGTGGCACC 60.037 60.000 29.32 29.32 38.99 5.01
2652 2714 0.679505 TGACTGTGAGTAGGTGGCAC 59.320 55.000 9.70 9.70 0.00 5.01
2653 2715 1.276138 CATGACTGTGAGTAGGTGGCA 59.724 52.381 0.00 0.00 0.00 4.92
2654 2716 1.276421 ACATGACTGTGAGTAGGTGGC 59.724 52.381 0.00 0.00 33.22 5.01
2655 2717 2.416027 CGACATGACTGTGAGTAGGTGG 60.416 54.545 0.00 0.00 35.14 4.61
2656 2718 2.868662 CGACATGACTGTGAGTAGGTG 58.131 52.381 0.00 0.00 35.14 4.00
2657 2719 1.202582 GCGACATGACTGTGAGTAGGT 59.797 52.381 0.00 0.00 35.14 3.08
2658 2720 1.474478 AGCGACATGACTGTGAGTAGG 59.526 52.381 0.00 0.00 35.14 3.18
2659 2721 2.095008 ACAGCGACATGACTGTGAGTAG 60.095 50.000 16.28 0.00 45.19 2.57
2660 2722 1.886542 ACAGCGACATGACTGTGAGTA 59.113 47.619 16.28 0.00 45.19 2.59
2661 2723 0.676184 ACAGCGACATGACTGTGAGT 59.324 50.000 16.28 0.00 45.19 3.41
2662 2724 2.162408 TCTACAGCGACATGACTGTGAG 59.838 50.000 22.34 16.86 46.31 3.51
2663 2725 2.159382 TCTACAGCGACATGACTGTGA 58.841 47.619 22.34 16.63 46.31 3.58
2664 2726 2.524034 CTCTACAGCGACATGACTGTG 58.476 52.381 22.34 15.29 46.31 3.66
2666 2728 1.554392 GCTCTACAGCGACATGACTG 58.446 55.000 0.00 6.66 35.39 3.51
2676 2738 0.985549 CGAAACAGTCGCTCTACAGC 59.014 55.000 0.00 0.00 44.14 4.40
2686 2748 0.503117 GACGTCAGTGCGAAACAGTC 59.497 55.000 11.55 2.66 35.59 3.51
2687 2749 0.179121 TGACGTCAGTGCGAAACAGT 60.179 50.000 15.76 0.00 35.59 3.55
2688 2750 0.504384 CTGACGTCAGTGCGAAACAG 59.496 55.000 32.77 8.45 39.09 3.16
2689 2751 2.588731 CTGACGTCAGTGCGAAACA 58.411 52.632 32.77 1.70 39.09 2.83
2699 2761 0.036671 TCCGCTCTAGACTGACGTCA 60.037 55.000 18.88 18.88 42.73 4.35
2700 2762 0.374410 GTCCGCTCTAGACTGACGTC 59.626 60.000 9.11 9.11 40.54 4.34
2701 2763 1.360194 CGTCCGCTCTAGACTGACGT 61.360 60.000 20.35 0.00 42.68 4.34
2702 2764 1.348938 CGTCCGCTCTAGACTGACG 59.651 63.158 17.54 17.54 42.13 4.35
2703 2765 1.062845 GCGTCCGCTCTAGACTGAC 59.937 63.158 4.10 0.00 38.26 3.51
2704 2766 0.958876 TTGCGTCCGCTCTAGACTGA 60.959 55.000 13.31 0.00 42.51 3.41
2705 2767 0.798771 GTTGCGTCCGCTCTAGACTG 60.799 60.000 13.31 0.00 42.51 3.51
2706 2768 1.507174 GTTGCGTCCGCTCTAGACT 59.493 57.895 13.31 0.00 42.51 3.24
2707 2769 1.516603 GGTTGCGTCCGCTCTAGAC 60.517 63.158 13.31 4.19 42.51 2.59
2708 2770 1.654954 GAGGTTGCGTCCGCTCTAGA 61.655 60.000 13.31 0.00 42.51 2.43
2709 2771 1.226717 GAGGTTGCGTCCGCTCTAG 60.227 63.158 13.31 0.00 42.51 2.43
2710 2772 1.654954 GAGAGGTTGCGTCCGCTCTA 61.655 60.000 18.26 0.00 46.10 2.43
2711 2773 2.992114 AGAGGTTGCGTCCGCTCT 60.992 61.111 13.31 4.38 42.51 4.09
2712 2774 2.507324 GAGAGGTTGCGTCCGCTC 60.507 66.667 13.31 12.95 44.35 5.03
2713 2775 2.172483 AATGAGAGGTTGCGTCCGCT 62.172 55.000 13.31 3.22 42.51 5.52
2714 2776 0.459585 TAATGAGAGGTTGCGTCCGC 60.460 55.000 4.42 4.42 42.35 5.54
2715 2777 1.278238 GTAATGAGAGGTTGCGTCCG 58.722 55.000 0.00 0.00 0.00 4.79
2716 2778 1.278238 CGTAATGAGAGGTTGCGTCC 58.722 55.000 0.00 0.00 31.47 4.79
2717 2779 0.645868 GCGTAATGAGAGGTTGCGTC 59.354 55.000 0.00 0.00 37.08 5.19
2718 2780 0.739813 GGCGTAATGAGAGGTTGCGT 60.740 55.000 0.00 0.00 37.08 5.24
2719 2781 1.752501 CGGCGTAATGAGAGGTTGCG 61.753 60.000 0.00 0.00 37.66 4.85
2720 2782 1.429148 CCGGCGTAATGAGAGGTTGC 61.429 60.000 6.01 0.00 0.00 4.17
2721 2783 1.429148 GCCGGCGTAATGAGAGGTTG 61.429 60.000 12.58 0.00 0.00 3.77
2722 2784 1.153429 GCCGGCGTAATGAGAGGTT 60.153 57.895 12.58 0.00 0.00 3.50
2723 2785 1.686325 ATGCCGGCGTAATGAGAGGT 61.686 55.000 22.45 0.00 0.00 3.85
2724 2786 0.532862 AATGCCGGCGTAATGAGAGG 60.533 55.000 24.18 0.00 0.00 3.69
2725 2787 2.992089 AATGCCGGCGTAATGAGAG 58.008 52.632 24.18 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.