Multiple sequence alignment - TraesCS2A01G467400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G467400 chr2A 100.000 3530 0 0 1 3530 711854804 711858333 0.000000e+00 6519.0
1 TraesCS2A01G467400 chr2A 76.963 1350 252 40 1151 2472 17118207 17119525 0.000000e+00 715.0
2 TraesCS2A01G467400 chr2A 76.797 1280 232 37 1203 2467 19471834 19473063 0.000000e+00 658.0
3 TraesCS2A01G467400 chr2A 84.431 501 41 16 2940 3438 618998803 618999268 3.210000e-125 459.0
4 TraesCS2A01G467400 chr2A 81.208 596 67 22 2791 3375 62721253 62720692 4.180000e-119 438.0
5 TraesCS2A01G467400 chr2A 72.781 1352 232 81 1145 2468 15449937 15448694 2.030000e-87 333.0
6 TraesCS2A01G467400 chr2A 75.474 738 137 30 1269 1996 2895531 2896234 1.580000e-83 320.0
7 TraesCS2A01G467400 chr2A 87.678 211 13 3 388 586 575349075 575349284 2.120000e-57 233.0
8 TraesCS2A01G467400 chr2B 92.128 2058 109 23 584 2612 687633559 687635592 0.000000e+00 2854.0
9 TraesCS2A01G467400 chr2B 74.750 1402 262 49 1097 2468 26925260 26926599 8.620000e-151 544.0
10 TraesCS2A01G467400 chr2B 83.865 502 47 16 2940 3438 692869440 692868970 6.950000e-122 448.0
11 TraesCS2A01G467400 chr2B 88.562 306 25 7 92 392 800252113 800251813 2.590000e-96 363.0
12 TraesCS2A01G467400 chr2B 79.012 405 49 22 2977 3375 197153214 197153588 9.790000e-61 244.0
13 TraesCS2A01G467400 chr2B 92.908 141 8 2 447 586 84920436 84920297 1.660000e-48 204.0
14 TraesCS2A01G467400 chr2D 95.447 1801 57 12 805 2587 572403954 572405747 0.000000e+00 2848.0
15 TraesCS2A01G467400 chr2D 76.945 1414 243 55 1092 2468 14970641 14972008 0.000000e+00 728.0
16 TraesCS2A01G467400 chr2D 82.636 645 74 25 2633 3249 571925057 571924423 1.440000e-148 536.0
17 TraesCS2A01G467400 chr2D 90.000 170 13 4 584 749 572379597 572379766 2.130000e-52 217.0
18 TraesCS2A01G467400 chr2D 83.168 202 25 6 388 582 9898301 9898500 3.620000e-40 176.0
19 TraesCS2A01G467400 chr4A 79.443 1435 236 37 1065 2468 626385453 626386859 0.000000e+00 961.0
20 TraesCS2A01G467400 chr4A 80.815 761 83 38 2639 3377 693234892 693234173 4.010000e-149 538.0
21 TraesCS2A01G467400 chr4A 89.933 298 23 2 100 390 618628149 618628446 9.250000e-101 377.0
22 TraesCS2A01G467400 chr4A 87.382 317 22 5 95 395 587332228 587332542 7.250000e-92 348.0
23 TraesCS2A01G467400 chr4A 88.000 200 22 2 388 586 26465008 26464810 5.890000e-58 235.0
24 TraesCS2A01G467400 chr1B 79.436 1454 217 47 1075 2482 603604418 603605835 0.000000e+00 953.0
25 TraesCS2A01G467400 chr1B 76.784 1107 208 25 1149 2235 2559831 2558754 3.060000e-160 575.0
26 TraesCS2A01G467400 chr1B 79.977 859 90 29 2631 3438 525830003 525829176 3.080000e-155 558.0
27 TraesCS2A01G467400 chr1B 78.860 842 106 32 2636 3438 29484420 29485228 1.460000e-138 503.0
28 TraesCS2A01G467400 chr1B 72.195 1417 280 85 1097 2468 17537835 17536488 2.630000e-86 329.0
29 TraesCS2A01G467400 chr1B 79.397 199 32 4 1989 2178 662551443 662551245 7.950000e-27 132.0
30 TraesCS2A01G467400 chr5D 78.977 1427 254 32 1065 2468 542632329 542630926 0.000000e+00 931.0
31 TraesCS2A01G467400 chr5D 78.090 1424 245 48 1065 2468 540079265 540080641 0.000000e+00 839.0
32 TraesCS2A01G467400 chr5D 93.443 61 4 0 36 96 134877109 134877169 1.350000e-14 91.6
33 TraesCS2A01G467400 chr4D 78.173 1434 231 50 1082 2471 489468900 489467505 0.000000e+00 839.0
34 TraesCS2A01G467400 chr4D 77.422 1435 241 54 1082 2471 489623818 489622422 0.000000e+00 778.0
35 TraesCS2A01G467400 chr4D 77.266 1434 218 67 1082 2471 489628924 489627555 0.000000e+00 743.0
36 TraesCS2A01G467400 chr4D 81.078 835 102 28 2632 3438 9595903 9595097 1.800000e-172 616.0
37 TraesCS2A01G467400 chr4D 88.644 317 20 7 95 395 36351755 36351439 4.300000e-99 372.0
38 TraesCS2A01G467400 chr4D 86.349 315 26 8 95 393 65916781 65916468 9.450000e-86 327.0
39 TraesCS2A01G467400 chr4D 79.114 316 60 5 1407 1718 489222528 489222215 2.760000e-51 213.0
40 TraesCS2A01G467400 chr5B 78.054 1408 245 45 1078 2468 682398498 682399858 0.000000e+00 830.0
41 TraesCS2A01G467400 chr5B 81.955 266 39 7 2639 2898 606282806 606282544 2.130000e-52 217.0
42 TraesCS2A01G467400 chr5B 84.236 203 30 2 2267 2468 684372984 684372783 2.780000e-46 196.0
43 TraesCS2A01G467400 chr5B 78.744 207 15 13 388 582 334062014 334062203 1.040000e-20 111.0
44 TraesCS2A01G467400 chr5B 92.063 63 5 0 34 96 416906480 416906542 4.850000e-14 89.8
45 TraesCS2A01G467400 chr3D 77.746 1411 235 48 1097 2480 7023321 7021963 0.000000e+00 793.0
46 TraesCS2A01G467400 chr3D 79.235 732 93 27 2639 3336 609150039 609149333 4.150000e-124 455.0
47 TraesCS2A01G467400 chr3D 87.107 318 25 6 91 392 606080236 606080553 2.610000e-91 346.0
48 TraesCS2A01G467400 chr3D 72.011 1104 212 72 1096 2170 511060736 511061771 1.640000e-58 237.0
49 TraesCS2A01G467400 chr3D 84.422 199 26 4 388 585 21330593 21330399 1.290000e-44 191.0
50 TraesCS2A01G467400 chr3D 94.828 58 3 0 39 96 419417692 419417749 1.350000e-14 91.6
51 TraesCS2A01G467400 chr3D 92.063 63 5 0 34 96 87391731 87391793 4.850000e-14 89.8
52 TraesCS2A01G467400 chr4B 77.871 1437 209 57 1082 2471 627812991 627811617 0.000000e+00 791.0
53 TraesCS2A01G467400 chr4B 77.561 1435 238 49 1082 2471 627556132 627554737 0.000000e+00 789.0
54 TraesCS2A01G467400 chr4B 83.665 502 47 18 2940 3438 494025686 494025217 1.160000e-119 440.0
55 TraesCS2A01G467400 chr4B 84.456 193 24 4 388 575 534404753 534404944 6.020000e-43 185.0
56 TraesCS2A01G467400 chr4B 92.063 63 5 0 34 96 672121937 672121999 4.850000e-14 89.8
57 TraesCS2A01G467400 chr1D 80.829 1038 160 23 1465 2478 476249211 476248189 0.000000e+00 778.0
58 TraesCS2A01G467400 chr1D 82.371 641 77 24 2635 3249 83695422 83694792 3.120000e-145 525.0
59 TraesCS2A01G467400 chr1D 86.129 310 21 8 98 390 476577778 476577474 7.360000e-82 315.0
60 TraesCS2A01G467400 chr1D 84.071 226 22 7 185 396 372880806 372881031 4.620000e-49 206.0
61 TraesCS2A01G467400 chr1D 80.147 136 24 2 1096 1228 11638883 11639018 8.060000e-17 99.0
62 TraesCS2A01G467400 chr7D 83.133 830 85 26 2635 3438 575306290 575307090 0.000000e+00 706.0
63 TraesCS2A01G467400 chr7D 80.792 833 108 28 2633 3438 458351726 458352533 3.900000e-169 604.0
64 TraesCS2A01G467400 chr7D 79.274 854 97 42 2636 3438 587112272 587113096 1.120000e-144 523.0
65 TraesCS2A01G467400 chr7D 87.898 314 22 7 95 392 549317425 549317738 4.330000e-94 355.0
66 TraesCS2A01G467400 chr7D 87.220 313 23 4 96 392 83598907 83598596 1.210000e-89 340.0
67 TraesCS2A01G467400 chr7D 79.705 271 44 7 2633 2898 589315416 589315680 6.020000e-43 185.0
68 TraesCS2A01G467400 chr7D 92.063 63 5 0 36 98 134485767 134485829 4.850000e-14 89.8
69 TraesCS2A01G467400 chr7B 75.796 1413 250 56 1097 2471 712766789 712768147 6.430000e-177 630.0
70 TraesCS2A01G467400 chr7B 83.173 208 26 5 388 588 638080485 638080280 7.780000e-42 182.0
71 TraesCS2A01G467400 chr7B 89.552 67 6 1 31 97 108393832 108393897 2.260000e-12 84.2
72 TraesCS2A01G467400 chr3A 77.726 1064 193 31 1160 2209 13363467 13364500 2.330000e-171 612.0
73 TraesCS2A01G467400 chr3A 87.220 313 23 4 96 392 60448852 60449163 1.210000e-89 340.0
74 TraesCS2A01G467400 chr3A 89.130 276 12 5 92 351 724800325 724800052 9.450000e-86 327.0
75 TraesCS2A01G467400 chr3B 81.538 715 75 28 2634 3315 603492985 603492295 1.440000e-148 536.0
76 TraesCS2A01G467400 chr3B 86.730 211 15 3 388 586 368322854 368323063 4.590000e-54 222.0
77 TraesCS2A01G467400 chr3B 91.304 69 6 0 28 96 472398607 472398675 1.040000e-15 95.3
78 TraesCS2A01G467400 chr7A 79.000 800 110 34 2647 3406 603519280 603520061 8.800000e-136 494.0
79 TraesCS2A01G467400 chr7A 89.490 314 16 6 98 395 134481027 134480715 7.150000e-102 381.0
80 TraesCS2A01G467400 chr7A 88.599 307 29 6 98 401 63914272 63913969 5.570000e-98 368.0
81 TraesCS2A01G467400 chr7A 89.078 293 30 1 98 388 700130628 700130336 2.590000e-96 363.0
82 TraesCS2A01G467400 chr7A 86.624 314 26 5 95 392 194452571 194452884 2.030000e-87 333.0
83 TraesCS2A01G467400 chrUn 78.279 732 107 36 2652 3376 79817105 79817791 1.170000e-114 424.0
84 TraesCS2A01G467400 chr5A 78.603 687 81 27 2729 3374 513710059 513710720 9.180000e-106 394.0
85 TraesCS2A01G467400 chr5A 88.997 309 17 5 98 390 60251580 60251887 2.000000e-97 366.0
86 TraesCS2A01G467400 chr5A 88.013 317 22 3 90 390 567896021 567895705 9.320000e-96 361.0
87 TraesCS2A01G467400 chr6A 90.291 309 14 2 98 390 140571118 140570810 1.190000e-104 390.0
88 TraesCS2A01G467400 chr6A 79.449 399 51 14 2977 3371 2059943 2060314 1.630000e-63 254.0
89 TraesCS2A01G467400 chr1A 88.509 322 17 5 93 395 549335081 549335401 4.300000e-99 372.0
90 TraesCS2A01G467400 chr1A 85.032 314 31 5 96 393 577823121 577822808 4.430000e-79 305.0
91 TraesCS2A01G467400 chr1A 71.669 1426 294 83 1086 2468 13805357 13806715 9.580000e-76 294.0
92 TraesCS2A01G467400 chr6D 88.026 309 21 7 98 390 340113142 340112834 5.610000e-93 351.0
93 TraesCS2A01G467400 chr6D 83.491 212 16 12 388 582 158203280 158203489 2.800000e-41 180.0
94 TraesCS2A01G467400 chr6B 80.172 348 46 14 2636 2961 641950012 641950358 4.550000e-59 239.0
95 TraesCS2A01G467400 chr6B 94.161 137 6 2 447 583 454511631 454511497 1.280000e-49 207.0
96 TraesCS2A01G467400 chr6B 94.828 58 3 0 39 96 163822896 163822839 1.350000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G467400 chr2A 711854804 711858333 3529 False 6519.0 6519 100.000 1 3530 1 chr2A.!!$F6 3529
1 TraesCS2A01G467400 chr2A 17118207 17119525 1318 False 715.0 715 76.963 1151 2472 1 chr2A.!!$F2 1321
2 TraesCS2A01G467400 chr2A 19471834 19473063 1229 False 658.0 658 76.797 1203 2467 1 chr2A.!!$F3 1264
3 TraesCS2A01G467400 chr2A 62720692 62721253 561 True 438.0 438 81.208 2791 3375 1 chr2A.!!$R2 584
4 TraesCS2A01G467400 chr2A 15448694 15449937 1243 True 333.0 333 72.781 1145 2468 1 chr2A.!!$R1 1323
5 TraesCS2A01G467400 chr2A 2895531 2896234 703 False 320.0 320 75.474 1269 1996 1 chr2A.!!$F1 727
6 TraesCS2A01G467400 chr2B 687633559 687635592 2033 False 2854.0 2854 92.128 584 2612 1 chr2B.!!$F3 2028
7 TraesCS2A01G467400 chr2B 26925260 26926599 1339 False 544.0 544 74.750 1097 2468 1 chr2B.!!$F1 1371
8 TraesCS2A01G467400 chr2D 572403954 572405747 1793 False 2848.0 2848 95.447 805 2587 1 chr2D.!!$F4 1782
9 TraesCS2A01G467400 chr2D 14970641 14972008 1367 False 728.0 728 76.945 1092 2468 1 chr2D.!!$F2 1376
10 TraesCS2A01G467400 chr2D 571924423 571925057 634 True 536.0 536 82.636 2633 3249 1 chr2D.!!$R1 616
11 TraesCS2A01G467400 chr4A 626385453 626386859 1406 False 961.0 961 79.443 1065 2468 1 chr4A.!!$F3 1403
12 TraesCS2A01G467400 chr4A 693234173 693234892 719 True 538.0 538 80.815 2639 3377 1 chr4A.!!$R2 738
13 TraesCS2A01G467400 chr1B 603604418 603605835 1417 False 953.0 953 79.436 1075 2482 1 chr1B.!!$F2 1407
14 TraesCS2A01G467400 chr1B 2558754 2559831 1077 True 575.0 575 76.784 1149 2235 1 chr1B.!!$R1 1086
15 TraesCS2A01G467400 chr1B 525829176 525830003 827 True 558.0 558 79.977 2631 3438 1 chr1B.!!$R3 807
16 TraesCS2A01G467400 chr1B 29484420 29485228 808 False 503.0 503 78.860 2636 3438 1 chr1B.!!$F1 802
17 TraesCS2A01G467400 chr1B 17536488 17537835 1347 True 329.0 329 72.195 1097 2468 1 chr1B.!!$R2 1371
18 TraesCS2A01G467400 chr5D 542630926 542632329 1403 True 931.0 931 78.977 1065 2468 1 chr5D.!!$R1 1403
19 TraesCS2A01G467400 chr5D 540079265 540080641 1376 False 839.0 839 78.090 1065 2468 1 chr5D.!!$F2 1403
20 TraesCS2A01G467400 chr4D 489467505 489468900 1395 True 839.0 839 78.173 1082 2471 1 chr4D.!!$R5 1389
21 TraesCS2A01G467400 chr4D 489622422 489628924 6502 True 760.5 778 77.344 1082 2471 2 chr4D.!!$R6 1389
22 TraesCS2A01G467400 chr4D 9595097 9595903 806 True 616.0 616 81.078 2632 3438 1 chr4D.!!$R1 806
23 TraesCS2A01G467400 chr5B 682398498 682399858 1360 False 830.0 830 78.054 1078 2468 1 chr5B.!!$F3 1390
24 TraesCS2A01G467400 chr3D 7021963 7023321 1358 True 793.0 793 77.746 1097 2480 1 chr3D.!!$R1 1383
25 TraesCS2A01G467400 chr3D 609149333 609150039 706 True 455.0 455 79.235 2639 3336 1 chr3D.!!$R3 697
26 TraesCS2A01G467400 chr3D 511060736 511061771 1035 False 237.0 237 72.011 1096 2170 1 chr3D.!!$F3 1074
27 TraesCS2A01G467400 chr4B 627811617 627812991 1374 True 791.0 791 77.871 1082 2471 1 chr4B.!!$R3 1389
28 TraesCS2A01G467400 chr4B 627554737 627556132 1395 True 789.0 789 77.561 1082 2471 1 chr4B.!!$R2 1389
29 TraesCS2A01G467400 chr1D 476248189 476249211 1022 True 778.0 778 80.829 1465 2478 1 chr1D.!!$R2 1013
30 TraesCS2A01G467400 chr1D 83694792 83695422 630 True 525.0 525 82.371 2635 3249 1 chr1D.!!$R1 614
31 TraesCS2A01G467400 chr7D 575306290 575307090 800 False 706.0 706 83.133 2635 3438 1 chr7D.!!$F4 803
32 TraesCS2A01G467400 chr7D 458351726 458352533 807 False 604.0 604 80.792 2633 3438 1 chr7D.!!$F2 805
33 TraesCS2A01G467400 chr7D 587112272 587113096 824 False 523.0 523 79.274 2636 3438 1 chr7D.!!$F5 802
34 TraesCS2A01G467400 chr7B 712766789 712768147 1358 False 630.0 630 75.796 1097 2471 1 chr7B.!!$F2 1374
35 TraesCS2A01G467400 chr3A 13363467 13364500 1033 False 612.0 612 77.726 1160 2209 1 chr3A.!!$F1 1049
36 TraesCS2A01G467400 chr3B 603492295 603492985 690 True 536.0 536 81.538 2634 3315 1 chr3B.!!$R1 681
37 TraesCS2A01G467400 chr7A 603519280 603520061 781 False 494.0 494 79.000 2647 3406 1 chr7A.!!$F2 759
38 TraesCS2A01G467400 chrUn 79817105 79817791 686 False 424.0 424 78.279 2652 3376 1 chrUn.!!$F1 724
39 TraesCS2A01G467400 chr5A 513710059 513710720 661 False 394.0 394 78.603 2729 3374 1 chr5A.!!$F2 645
40 TraesCS2A01G467400 chr1A 13805357 13806715 1358 False 294.0 294 71.669 1086 2468 1 chr1A.!!$F1 1382

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
243 244 0.031178 CGCAGCATATTTTGGGCTCC 59.969 55.000 0.00 0.00 35.27 4.70 F
244 245 0.031178 GCAGCATATTTTGGGCTCCG 59.969 55.000 0.00 0.00 35.27 4.63 F
338 339 0.040425 AAAAGTGCTAAAGTGGCGCG 60.040 50.000 0.00 0.00 43.87 6.86 F
374 375 0.041400 GTGCCAAATTTTTGTGCGGC 60.041 50.000 7.78 7.78 37.25 6.53 F
415 416 0.248296 GTGACCGAGTTTGCGCAAAA 60.248 50.000 35.09 16.62 31.33 2.44 F
416 417 0.452184 TGACCGAGTTTGCGCAAAAA 59.548 45.000 35.09 14.23 31.33 1.94 F
417 418 1.066303 TGACCGAGTTTGCGCAAAAAT 59.934 42.857 35.09 26.30 31.33 1.82 F
1787 7173 1.219124 GGCAAGCTCGAGGACATCA 59.781 57.895 15.58 0.00 0.00 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1787 7173 0.314302 GTATCTACACGCTGGCCGAT 59.686 55.000 0.00 0.00 41.02 4.18 R
1908 7303 1.531840 AGCGAGGAGATGGCGGTAT 60.532 57.895 0.00 0.00 37.77 2.73 R
1909 7304 2.123854 AGCGAGGAGATGGCGGTA 60.124 61.111 0.00 0.00 37.77 4.02 R
2059 7465 2.817834 GCGTGCTCCACCGCATTA 60.818 61.111 0.00 0.00 42.62 1.90 R
2483 7929 7.308435 AGAAAGCGGCATAATTATTAATCAGC 58.692 34.615 1.45 0.00 0.00 4.26 R
2497 7943 7.011482 CAGAGTACTTAATTAAGAAAGCGGCAT 59.989 37.037 27.92 8.04 37.08 4.40 R
2516 7962 3.552294 GGCGTCTTATTCAAGCAGAGTAC 59.448 47.826 0.00 0.00 0.00 2.73 R
2699 8149 2.885135 TGATGTGCTGATTTCAGGGT 57.115 45.000 9.49 0.00 43.94 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.158099 GTTGGTTTAGTGCAATTCCTAATCT 57.842 36.000 0.00 0.00 0.00 2.40
25 26 7.251281 GTTGGTTTAGTGCAATTCCTAATCTC 58.749 38.462 0.00 0.00 0.00 2.75
26 27 6.721318 TGGTTTAGTGCAATTCCTAATCTCT 58.279 36.000 0.00 0.00 0.00 3.10
27 28 6.599244 TGGTTTAGTGCAATTCCTAATCTCTG 59.401 38.462 0.00 0.00 0.00 3.35
28 29 6.823689 GGTTTAGTGCAATTCCTAATCTCTGA 59.176 38.462 0.00 0.00 0.00 3.27
29 30 7.201652 GGTTTAGTGCAATTCCTAATCTCTGAC 60.202 40.741 0.00 0.00 0.00 3.51
30 31 4.437239 AGTGCAATTCCTAATCTCTGACG 58.563 43.478 0.00 0.00 0.00 4.35
31 32 3.557595 GTGCAATTCCTAATCTCTGACGG 59.442 47.826 0.00 0.00 0.00 4.79
32 33 3.450817 TGCAATTCCTAATCTCTGACGGA 59.549 43.478 0.00 0.00 0.00 4.69
33 34 3.804873 GCAATTCCTAATCTCTGACGGAC 59.195 47.826 0.00 0.00 0.00 4.79
34 35 3.992260 ATTCCTAATCTCTGACGGACG 57.008 47.619 0.00 0.00 0.00 4.79
35 36 2.704464 TCCTAATCTCTGACGGACGA 57.296 50.000 0.00 0.00 0.00 4.20
36 37 3.210232 TCCTAATCTCTGACGGACGAT 57.790 47.619 0.00 0.00 0.00 3.73
37 38 2.879026 TCCTAATCTCTGACGGACGATG 59.121 50.000 0.00 0.00 0.00 3.84
38 39 2.619177 CCTAATCTCTGACGGACGATGT 59.381 50.000 0.00 0.00 0.00 3.06
39 40 3.813724 CCTAATCTCTGACGGACGATGTA 59.186 47.826 0.00 0.00 0.00 2.29
40 41 3.694535 AATCTCTGACGGACGATGTAC 57.305 47.619 0.00 0.00 0.00 2.90
41 42 2.398252 TCTCTGACGGACGATGTACT 57.602 50.000 0.00 0.00 0.00 2.73
42 43 2.277969 TCTCTGACGGACGATGTACTC 58.722 52.381 0.00 0.00 0.00 2.59
43 44 2.007608 CTCTGACGGACGATGTACTCA 58.992 52.381 0.00 0.00 0.00 3.41
44 45 1.736126 TCTGACGGACGATGTACTCAC 59.264 52.381 0.00 0.00 0.00 3.51
45 46 1.738350 CTGACGGACGATGTACTCACT 59.262 52.381 0.00 0.00 0.00 3.41
46 47 1.736126 TGACGGACGATGTACTCACTC 59.264 52.381 0.00 0.00 0.00 3.51
47 48 2.008329 GACGGACGATGTACTCACTCT 58.992 52.381 0.00 0.00 0.00 3.24
48 49 1.738350 ACGGACGATGTACTCACTCTG 59.262 52.381 0.00 0.00 0.00 3.35
49 50 1.532090 CGGACGATGTACTCACTCTGC 60.532 57.143 0.00 0.00 0.00 4.26
50 51 1.202313 GGACGATGTACTCACTCTGCC 60.202 57.143 0.00 0.00 0.00 4.85
51 52 0.818296 ACGATGTACTCACTCTGCCC 59.182 55.000 0.00 0.00 0.00 5.36
52 53 1.107114 CGATGTACTCACTCTGCCCT 58.893 55.000 0.00 0.00 0.00 5.19
53 54 1.478510 CGATGTACTCACTCTGCCCTT 59.521 52.381 0.00 0.00 0.00 3.95
54 55 2.736719 CGATGTACTCACTCTGCCCTTG 60.737 54.545 0.00 0.00 0.00 3.61
55 56 2.009681 TGTACTCACTCTGCCCTTGA 57.990 50.000 0.00 0.00 0.00 3.02
56 57 2.325484 TGTACTCACTCTGCCCTTGAA 58.675 47.619 0.00 0.00 0.00 2.69
57 58 2.703536 TGTACTCACTCTGCCCTTGAAA 59.296 45.455 0.00 0.00 0.00 2.69
58 59 2.557920 ACTCACTCTGCCCTTGAAAG 57.442 50.000 0.00 0.00 0.00 2.62
59 60 2.050144 ACTCACTCTGCCCTTGAAAGA 58.950 47.619 0.00 0.00 0.00 2.52
60 61 2.038295 ACTCACTCTGCCCTTGAAAGAG 59.962 50.000 0.00 0.00 42.59 2.85
62 63 2.557920 ACTCTGCCCTTGAAAGAGTG 57.442 50.000 3.86 0.00 46.81 3.51
63 64 1.771255 ACTCTGCCCTTGAAAGAGTGT 59.229 47.619 3.86 0.00 46.81 3.55
64 65 2.972713 ACTCTGCCCTTGAAAGAGTGTA 59.027 45.455 3.86 0.00 46.81 2.90
65 66 3.244249 ACTCTGCCCTTGAAAGAGTGTAC 60.244 47.826 3.86 0.00 46.81 2.90
66 67 2.972713 TCTGCCCTTGAAAGAGTGTACT 59.027 45.455 0.00 0.00 0.00 2.73
67 68 3.391296 TCTGCCCTTGAAAGAGTGTACTT 59.609 43.478 0.00 0.00 0.00 2.24
68 69 3.740115 TGCCCTTGAAAGAGTGTACTTC 58.260 45.455 0.00 0.00 0.00 3.01
69 70 3.075148 GCCCTTGAAAGAGTGTACTTCC 58.925 50.000 0.00 0.00 0.00 3.46
70 71 3.496160 GCCCTTGAAAGAGTGTACTTCCA 60.496 47.826 0.00 0.00 0.00 3.53
71 72 4.714632 CCCTTGAAAGAGTGTACTTCCAA 58.285 43.478 0.00 0.00 0.00 3.53
72 73 4.515567 CCCTTGAAAGAGTGTACTTCCAAC 59.484 45.833 0.00 0.00 0.00 3.77
73 74 5.368989 CCTTGAAAGAGTGTACTTCCAACT 58.631 41.667 0.00 0.00 0.00 3.16
74 75 5.823045 CCTTGAAAGAGTGTACTTCCAACTT 59.177 40.000 0.00 0.00 0.00 2.66
75 76 6.318900 CCTTGAAAGAGTGTACTTCCAACTTT 59.681 38.462 0.00 0.00 0.00 2.66
76 77 6.677781 TGAAAGAGTGTACTTCCAACTTTG 57.322 37.500 0.00 0.00 0.00 2.77
77 78 6.177610 TGAAAGAGTGTACTTCCAACTTTGT 58.822 36.000 0.00 0.00 0.00 2.83
78 79 6.657541 TGAAAGAGTGTACTTCCAACTTTGTT 59.342 34.615 0.00 0.00 0.00 2.83
79 80 6.436843 AAGAGTGTACTTCCAACTTTGTTG 57.563 37.500 3.69 3.69 0.00 3.33
80 81 4.881850 AGAGTGTACTTCCAACTTTGTTGG 59.118 41.667 19.97 19.97 40.87 3.77
81 82 4.850680 AGTGTACTTCCAACTTTGTTGGA 58.149 39.130 23.38 23.38 46.08 3.53
87 88 3.874383 TCCAACTTTGTTGGAGGATCA 57.126 42.857 23.38 5.39 43.17 2.92
88 89 4.177537 TCCAACTTTGTTGGAGGATCAA 57.822 40.909 23.38 4.76 43.17 2.57
89 90 4.541705 TCCAACTTTGTTGGAGGATCAAA 58.458 39.130 23.38 4.13 43.17 2.69
101 102 6.412362 TGGAGGATCAAACTATCTTAGAGC 57.588 41.667 0.00 0.00 36.25 4.09
102 103 5.899547 TGGAGGATCAAACTATCTTAGAGCA 59.100 40.000 0.00 0.00 36.25 4.26
103 104 6.556495 TGGAGGATCAAACTATCTTAGAGCAT 59.444 38.462 0.00 0.00 36.25 3.79
104 105 7.096551 GGAGGATCAAACTATCTTAGAGCATC 58.903 42.308 0.00 0.00 36.25 3.91
105 106 7.039082 GGAGGATCAAACTATCTTAGAGCATCT 60.039 40.741 0.00 0.00 44.48 2.90
106 107 8.028938 GAGGATCAAACTATCTTAGAGCATCTC 58.971 40.741 0.00 0.00 39.61 2.75
115 116 4.232310 GAGCATCTCCAACAGGCC 57.768 61.111 0.00 0.00 0.00 5.19
116 117 1.452833 GAGCATCTCCAACAGGCCC 60.453 63.158 0.00 0.00 0.00 5.80
117 118 2.202236 GAGCATCTCCAACAGGCCCA 62.202 60.000 0.00 0.00 0.00 5.36
118 119 1.304381 GCATCTCCAACAGGCCCAA 60.304 57.895 0.00 0.00 0.00 4.12
119 120 0.899717 GCATCTCCAACAGGCCCAAA 60.900 55.000 0.00 0.00 0.00 3.28
120 121 1.631405 CATCTCCAACAGGCCCAAAA 58.369 50.000 0.00 0.00 0.00 2.44
121 122 1.969923 CATCTCCAACAGGCCCAAAAA 59.030 47.619 0.00 0.00 0.00 1.94
122 123 1.703411 TCTCCAACAGGCCCAAAAAG 58.297 50.000 0.00 0.00 0.00 2.27
123 124 1.216678 TCTCCAACAGGCCCAAAAAGA 59.783 47.619 0.00 0.00 0.00 2.52
124 125 1.615392 CTCCAACAGGCCCAAAAAGAG 59.385 52.381 0.00 0.00 0.00 2.85
125 126 0.033920 CCAACAGGCCCAAAAAGAGC 59.966 55.000 0.00 0.00 0.00 4.09
129 130 3.381983 GGCCCAAAAAGAGCCCCG 61.382 66.667 0.00 0.00 41.00 5.73
130 131 4.069232 GCCCAAAAAGAGCCCCGC 62.069 66.667 0.00 0.00 0.00 6.13
131 132 2.600173 CCCAAAAAGAGCCCCGCA 60.600 61.111 0.00 0.00 0.00 5.69
132 133 2.650778 CCAAAAAGAGCCCCGCAC 59.349 61.111 0.00 0.00 0.00 5.34
133 134 2.199652 CCAAAAAGAGCCCCGCACA 61.200 57.895 0.00 0.00 0.00 4.57
134 135 1.007387 CAAAAAGAGCCCCGCACAC 60.007 57.895 0.00 0.00 0.00 3.82
135 136 1.152756 AAAAAGAGCCCCGCACACT 60.153 52.632 0.00 0.00 0.00 3.55
136 137 0.109723 AAAAAGAGCCCCGCACACTA 59.890 50.000 0.00 0.00 0.00 2.74
137 138 0.109723 AAAAGAGCCCCGCACACTAA 59.890 50.000 0.00 0.00 0.00 2.24
138 139 0.109723 AAAGAGCCCCGCACACTAAA 59.890 50.000 0.00 0.00 0.00 1.85
139 140 0.109723 AAGAGCCCCGCACACTAAAA 59.890 50.000 0.00 0.00 0.00 1.52
140 141 0.328258 AGAGCCCCGCACACTAAAAT 59.672 50.000 0.00 0.00 0.00 1.82
141 142 1.173913 GAGCCCCGCACACTAAAATT 58.826 50.000 0.00 0.00 0.00 1.82
142 143 1.544246 GAGCCCCGCACACTAAAATTT 59.456 47.619 0.00 0.00 0.00 1.82
143 144 1.967779 AGCCCCGCACACTAAAATTTT 59.032 42.857 8.75 8.75 0.00 1.82
144 145 2.065512 GCCCCGCACACTAAAATTTTG 58.934 47.619 13.76 6.30 0.00 2.44
145 146 2.547007 GCCCCGCACACTAAAATTTTGT 60.547 45.455 13.76 6.89 0.00 2.83
146 147 3.723260 CCCCGCACACTAAAATTTTGTT 58.277 40.909 13.76 0.00 0.00 2.83
147 148 4.123506 CCCCGCACACTAAAATTTTGTTT 58.876 39.130 13.76 0.82 0.00 2.83
148 149 4.572795 CCCCGCACACTAAAATTTTGTTTT 59.427 37.500 13.76 0.00 0.00 2.43
149 150 5.065346 CCCCGCACACTAAAATTTTGTTTTT 59.935 36.000 13.76 0.00 33.56 1.94
164 165 4.277593 TTTTTGGGCGCCGCACAG 62.278 61.111 22.54 0.00 45.08 3.66
174 175 4.383861 CCGCACAGCTCCAGCAGA 62.384 66.667 0.48 0.00 45.16 4.26
175 176 2.125229 CGCACAGCTCCAGCAGAT 60.125 61.111 0.48 0.00 45.16 2.90
176 177 2.461945 CGCACAGCTCCAGCAGATG 61.462 63.158 0.48 0.00 44.80 2.90
177 178 2.762234 GCACAGCTCCAGCAGATGC 61.762 63.158 0.48 3.86 42.85 3.91
187 188 4.738198 GCAGATGCTGTAGCGCTA 57.262 55.556 14.45 14.45 45.83 4.26
188 189 2.977700 GCAGATGCTGTAGCGCTAA 58.022 52.632 20.73 3.40 45.83 3.09
189 190 1.290203 GCAGATGCTGTAGCGCTAAA 58.710 50.000 20.73 13.83 45.83 1.85
190 191 1.665679 GCAGATGCTGTAGCGCTAAAA 59.334 47.619 20.73 9.85 45.83 1.52
191 192 2.286067 GCAGATGCTGTAGCGCTAAAAG 60.286 50.000 20.73 19.88 45.83 2.27
192 193 2.932614 CAGATGCTGTAGCGCTAAAAGT 59.067 45.455 20.73 5.03 45.83 2.66
193 194 3.372206 CAGATGCTGTAGCGCTAAAAGTT 59.628 43.478 20.73 11.36 45.83 2.66
194 195 4.003648 AGATGCTGTAGCGCTAAAAGTTT 58.996 39.130 20.73 11.03 45.83 2.66
195 196 4.455877 AGATGCTGTAGCGCTAAAAGTTTT 59.544 37.500 20.73 6.06 45.83 2.43
196 197 4.561735 TGCTGTAGCGCTAAAAGTTTTT 57.438 36.364 20.73 0.00 45.83 1.94
197 198 4.286910 TGCTGTAGCGCTAAAAGTTTTTG 58.713 39.130 20.73 5.79 45.83 2.44
198 199 3.668656 GCTGTAGCGCTAAAAGTTTTTGG 59.331 43.478 20.73 0.00 0.00 3.28
199 200 4.226761 CTGTAGCGCTAAAAGTTTTTGGG 58.773 43.478 20.73 18.10 0.00 4.12
200 201 2.148916 AGCGCTAAAAGTTTTTGGGC 57.851 45.000 30.39 30.39 37.38 5.36
201 202 0.781787 GCGCTAAAAGTTTTTGGGCG 59.218 50.000 26.58 25.61 46.09 6.13
202 203 0.781787 CGCTAAAAGTTTTTGGGCGC 59.218 50.000 20.89 0.00 42.00 6.53
203 204 0.781787 GCTAAAAGTTTTTGGGCGCG 59.218 50.000 6.10 0.00 0.00 6.86
204 205 0.781787 CTAAAAGTTTTTGGGCGCGC 59.218 50.000 25.94 25.94 0.00 6.86
205 206 0.935366 TAAAAGTTTTTGGGCGCGCG 60.935 50.000 28.44 28.44 0.00 6.86
222 223 2.828784 CGCTGAAAAACGCTATCGC 58.171 52.632 0.00 0.00 39.84 4.58
223 224 0.094558 CGCTGAAAAACGCTATCGCA 59.905 50.000 0.00 0.00 39.84 5.10
224 225 1.524548 GCTGAAAAACGCTATCGCAC 58.475 50.000 0.00 0.00 39.84 5.34
225 226 1.785881 CTGAAAAACGCTATCGCACG 58.214 50.000 0.00 0.00 39.84 5.34
226 227 0.179235 TGAAAAACGCTATCGCACGC 60.179 50.000 0.00 0.00 39.84 5.34
227 228 0.179235 GAAAAACGCTATCGCACGCA 60.179 50.000 0.00 0.00 39.84 5.24
228 229 0.179225 AAAAACGCTATCGCACGCAG 60.179 50.000 0.00 0.00 39.84 5.18
229 230 2.563086 AAAACGCTATCGCACGCAGC 62.563 55.000 6.45 6.45 39.84 5.25
230 231 4.794439 ACGCTATCGCACGCAGCA 62.794 61.111 14.08 0.00 46.13 4.41
231 232 3.333189 CGCTATCGCACGCAGCAT 61.333 61.111 14.08 0.00 46.13 3.79
232 233 2.016165 CGCTATCGCACGCAGCATA 61.016 57.895 14.08 0.00 46.13 3.14
233 234 1.347097 CGCTATCGCACGCAGCATAT 61.347 55.000 14.08 0.00 46.13 1.78
234 235 0.792640 GCTATCGCACGCAGCATATT 59.207 50.000 10.37 0.00 46.13 1.28
235 236 1.195448 GCTATCGCACGCAGCATATTT 59.805 47.619 10.37 0.00 46.13 1.40
236 237 2.349817 GCTATCGCACGCAGCATATTTT 60.350 45.455 10.37 0.00 46.13 1.82
237 238 2.109609 ATCGCACGCAGCATATTTTG 57.890 45.000 0.00 0.00 46.13 2.44
238 239 0.098552 TCGCACGCAGCATATTTTGG 59.901 50.000 0.00 0.00 46.13 3.28
239 240 0.866906 CGCACGCAGCATATTTTGGG 60.867 55.000 0.00 0.30 46.13 4.12
240 241 1.147557 GCACGCAGCATATTTTGGGC 61.148 55.000 0.00 0.00 44.79 5.36
241 242 0.457035 CACGCAGCATATTTTGGGCT 59.543 50.000 0.00 0.00 38.70 5.19
242 243 0.740737 ACGCAGCATATTTTGGGCTC 59.259 50.000 0.00 0.00 35.27 4.70
243 244 0.031178 CGCAGCATATTTTGGGCTCC 59.969 55.000 0.00 0.00 35.27 4.70
244 245 0.031178 GCAGCATATTTTGGGCTCCG 59.969 55.000 0.00 0.00 35.27 4.63
245 246 1.679139 CAGCATATTTTGGGCTCCGA 58.321 50.000 0.00 0.00 35.27 4.55
246 247 2.023673 CAGCATATTTTGGGCTCCGAA 58.976 47.619 0.00 0.00 35.27 4.30
247 248 2.624838 CAGCATATTTTGGGCTCCGAAT 59.375 45.455 0.00 0.00 35.27 3.34
248 249 3.068590 CAGCATATTTTGGGCTCCGAATT 59.931 43.478 0.00 0.00 35.27 2.17
249 250 3.068590 AGCATATTTTGGGCTCCGAATTG 59.931 43.478 0.00 0.00 30.74 2.32
250 251 3.383761 CATATTTTGGGCTCCGAATTGC 58.616 45.455 0.00 0.00 0.00 3.56
251 252 0.173255 ATTTTGGGCTCCGAATTGCG 59.827 50.000 0.00 0.00 40.47 4.85
252 253 2.485188 TTTTGGGCTCCGAATTGCGC 62.485 55.000 0.00 0.00 41.57 6.09
266 267 2.800746 GCGCGCGCTTCACAATTT 60.801 55.556 44.38 0.00 38.26 1.82
267 268 3.046460 GCGCGCGCTTCACAATTTG 62.046 57.895 44.38 10.35 38.26 2.32
268 269 2.765150 GCGCGCTTCACAATTTGC 59.235 55.556 26.67 0.00 0.00 3.68
269 270 2.015627 GCGCGCTTCACAATTTGCA 61.016 52.632 26.67 0.00 0.00 4.08
270 271 1.768603 CGCGCTTCACAATTTGCAC 59.231 52.632 5.56 0.00 0.00 4.57
271 272 0.661187 CGCGCTTCACAATTTGCACT 60.661 50.000 5.56 0.00 0.00 4.40
272 273 0.780002 GCGCTTCACAATTTGCACTG 59.220 50.000 0.00 0.00 0.00 3.66
273 274 1.865248 GCGCTTCACAATTTGCACTGT 60.865 47.619 0.00 0.00 0.00 3.55
274 275 1.782569 CGCTTCACAATTTGCACTGTG 59.217 47.619 13.97 13.97 43.53 3.66
275 276 2.795681 CGCTTCACAATTTGCACTGTGT 60.796 45.455 17.71 6.18 42.86 3.72
276 277 2.536803 GCTTCACAATTTGCACTGTGTG 59.463 45.455 17.71 15.91 42.86 3.82
286 287 2.976271 CACTGTGTGCTTTTTGGGC 58.024 52.632 0.00 0.00 0.00 5.36
287 288 0.871163 CACTGTGTGCTTTTTGGGCG 60.871 55.000 0.00 0.00 0.00 6.13
288 289 1.319614 ACTGTGTGCTTTTTGGGCGT 61.320 50.000 0.00 0.00 0.00 5.68
289 290 0.594796 CTGTGTGCTTTTTGGGCGTC 60.595 55.000 0.00 0.00 0.00 5.19
290 291 1.034838 TGTGTGCTTTTTGGGCGTCT 61.035 50.000 0.00 0.00 0.00 4.18
291 292 0.594796 GTGTGCTTTTTGGGCGTCTG 60.595 55.000 0.00 0.00 0.00 3.51
292 293 1.661509 GTGCTTTTTGGGCGTCTGC 60.662 57.895 0.00 0.00 41.71 4.26
293 294 2.124060 TGCTTTTTGGGCGTCTGCA 61.124 52.632 0.00 0.00 45.35 4.41
294 295 1.067250 GCTTTTTGGGCGTCTGCAA 59.933 52.632 0.00 0.00 45.35 4.08
295 296 0.529555 GCTTTTTGGGCGTCTGCAAA 60.530 50.000 0.00 0.00 45.35 3.68
296 297 1.933247 CTTTTTGGGCGTCTGCAAAA 58.067 45.000 0.80 0.80 45.35 2.44
297 298 1.860326 CTTTTTGGGCGTCTGCAAAAG 59.140 47.619 4.73 4.90 45.35 2.27
298 299 0.529555 TTTTGGGCGTCTGCAAAAGC 60.530 50.000 0.80 0.00 45.35 3.51
299 300 2.676016 TTTGGGCGTCTGCAAAAGCG 62.676 55.000 0.00 0.00 45.35 4.68
300 301 3.353836 GGGCGTCTGCAAAAGCGA 61.354 61.111 0.00 0.00 45.35 4.93
301 302 2.690778 GGGCGTCTGCAAAAGCGAT 61.691 57.895 0.00 0.00 45.35 4.58
302 303 1.512734 GGCGTCTGCAAAAGCGATG 60.513 57.895 0.00 0.00 45.35 3.84
303 304 1.207593 GCGTCTGCAAAAGCGATGT 59.792 52.632 0.00 0.00 42.15 3.06
304 305 0.385974 GCGTCTGCAAAAGCGATGTT 60.386 50.000 0.00 0.00 42.15 2.71
305 306 1.321016 CGTCTGCAAAAGCGATGTTG 58.679 50.000 0.00 0.00 0.00 3.33
306 307 1.689959 GTCTGCAAAAGCGATGTTGG 58.310 50.000 5.61 0.00 0.00 3.77
307 308 1.001378 GTCTGCAAAAGCGATGTTGGT 60.001 47.619 5.61 0.00 0.00 3.67
308 309 1.266718 TCTGCAAAAGCGATGTTGGTC 59.733 47.619 5.61 0.00 0.00 4.02
309 310 0.313672 TGCAAAAGCGATGTTGGTCC 59.686 50.000 5.61 0.00 0.00 4.46
310 311 0.388520 GCAAAAGCGATGTTGGTCCC 60.389 55.000 5.61 0.00 0.00 4.46
311 312 0.243636 CAAAAGCGATGTTGGTCCCC 59.756 55.000 0.00 0.00 0.00 4.81
312 313 1.241315 AAAAGCGATGTTGGTCCCCG 61.241 55.000 0.00 0.00 0.00 5.73
313 314 4.778143 AGCGATGTTGGTCCCCGC 62.778 66.667 0.00 0.00 45.39 6.13
319 320 4.382320 GTTGGTCCCCGCGCACTA 62.382 66.667 8.75 0.00 0.00 2.74
320 321 3.627952 TTGGTCCCCGCGCACTAA 61.628 61.111 8.75 0.00 0.00 2.24
321 322 3.179888 TTGGTCCCCGCGCACTAAA 62.180 57.895 8.75 0.00 0.00 1.85
322 323 2.358984 GGTCCCCGCGCACTAAAA 60.359 61.111 8.75 0.00 0.00 1.52
323 324 2.396157 GGTCCCCGCGCACTAAAAG 61.396 63.158 8.75 0.00 0.00 2.27
324 325 1.670083 GTCCCCGCGCACTAAAAGT 60.670 57.895 8.75 0.00 0.00 2.66
336 337 3.810373 CACTAAAAGTGCTAAAGTGGCG 58.190 45.455 0.00 0.00 39.62 5.69
337 338 2.225727 ACTAAAAGTGCTAAAGTGGCGC 59.774 45.455 0.00 0.00 40.08 6.53
338 339 0.040425 AAAAGTGCTAAAGTGGCGCG 60.040 50.000 0.00 0.00 43.87 6.86
339 340 2.458006 AAAGTGCTAAAGTGGCGCGC 62.458 55.000 25.94 25.94 43.87 6.86
340 341 3.423154 GTGCTAAAGTGGCGCGCT 61.423 61.111 32.29 13.63 0.00 5.92
341 342 2.098233 GTGCTAAAGTGGCGCGCTA 61.098 57.895 32.29 24.64 0.00 4.26
342 343 1.153449 TGCTAAAGTGGCGCGCTAT 60.153 52.632 32.29 13.14 0.00 2.97
343 344 0.103390 TGCTAAAGTGGCGCGCTATA 59.897 50.000 32.29 13.63 0.00 1.31
344 345 1.214367 GCTAAAGTGGCGCGCTATAA 58.786 50.000 32.29 11.71 0.00 0.98
345 346 1.192534 GCTAAAGTGGCGCGCTATAAG 59.807 52.381 32.29 20.14 0.00 1.73
346 347 2.470821 CTAAAGTGGCGCGCTATAAGT 58.529 47.619 32.29 14.08 0.00 2.24
347 348 1.734163 AAAGTGGCGCGCTATAAGTT 58.266 45.000 32.29 18.92 0.00 2.66
348 349 1.734163 AAGTGGCGCGCTATAAGTTT 58.266 45.000 32.29 12.52 0.00 2.66
349 350 1.734163 AGTGGCGCGCTATAAGTTTT 58.266 45.000 32.29 3.07 0.00 2.43
350 351 2.896168 AGTGGCGCGCTATAAGTTTTA 58.104 42.857 32.29 1.77 0.00 1.52
351 352 3.463944 AGTGGCGCGCTATAAGTTTTAT 58.536 40.909 32.29 0.80 0.00 1.40
352 353 3.875134 AGTGGCGCGCTATAAGTTTTATT 59.125 39.130 32.29 0.00 0.00 1.40
353 354 3.966218 GTGGCGCGCTATAAGTTTTATTG 59.034 43.478 32.29 0.00 0.00 1.90
354 355 3.002862 TGGCGCGCTATAAGTTTTATTGG 59.997 43.478 32.29 0.00 0.00 3.16
355 356 3.551551 GCGCGCTATAAGTTTTATTGGG 58.448 45.455 26.67 4.02 0.00 4.12
356 357 3.002965 GCGCGCTATAAGTTTTATTGGGT 59.997 43.478 26.67 0.00 0.00 4.51
357 358 4.523813 CGCGCTATAAGTTTTATTGGGTG 58.476 43.478 5.56 7.42 0.00 4.61
358 359 4.287720 GCGCTATAAGTTTTATTGGGTGC 58.712 43.478 0.00 0.00 0.00 5.01
359 360 4.791734 GCGCTATAAGTTTTATTGGGTGCC 60.792 45.833 0.00 0.00 0.00 5.01
360 361 4.336993 CGCTATAAGTTTTATTGGGTGCCA 59.663 41.667 0.00 0.00 0.00 4.92
371 372 1.673168 TGGGTGCCAAATTTTTGTGC 58.327 45.000 2.63 6.07 36.45 4.57
372 373 0.585838 GGGTGCCAAATTTTTGTGCG 59.414 50.000 2.63 0.00 37.25 5.34
373 374 0.585838 GGTGCCAAATTTTTGTGCGG 59.414 50.000 2.63 0.00 37.25 5.69
374 375 0.041400 GTGCCAAATTTTTGTGCGGC 60.041 50.000 7.78 7.78 37.25 6.53
375 376 1.162800 TGCCAAATTTTTGTGCGGCC 61.163 50.000 11.28 0.00 37.25 6.13
376 377 1.858719 CCAAATTTTTGTGCGGCCG 59.141 52.632 24.05 24.05 36.45 6.13
377 378 0.878086 CCAAATTTTTGTGCGGCCGT 60.878 50.000 28.70 0.00 36.45 5.68
378 379 0.933796 CAAATTTTTGTGCGGCCGTT 59.066 45.000 28.70 7.35 33.59 4.44
379 380 0.933796 AAATTTTTGTGCGGCCGTTG 59.066 45.000 28.70 0.00 0.00 4.10
380 381 1.494766 AATTTTTGTGCGGCCGTTGC 61.495 50.000 28.70 17.21 0.00 4.17
381 382 2.635229 ATTTTTGTGCGGCCGTTGCA 62.635 50.000 28.70 19.67 40.13 4.08
382 383 3.764810 TTTTGTGCGGCCGTTGCAG 62.765 57.895 28.70 0.00 44.21 4.41
385 386 4.465512 GTGCGGCCGTTGCAGATG 62.466 66.667 28.70 0.00 44.21 2.90
388 389 3.869272 CGGCCGTTGCAGATGCTC 61.869 66.667 19.50 0.00 42.66 4.26
389 390 2.437359 GGCCGTTGCAGATGCTCT 60.437 61.111 6.35 0.00 42.66 4.09
390 391 2.042831 GGCCGTTGCAGATGCTCTT 61.043 57.895 6.35 0.00 42.66 2.85
391 392 0.744414 GGCCGTTGCAGATGCTCTTA 60.744 55.000 6.35 0.00 42.66 2.10
392 393 1.086696 GCCGTTGCAGATGCTCTTAA 58.913 50.000 6.35 0.00 42.66 1.85
393 394 1.468520 GCCGTTGCAGATGCTCTTAAA 59.531 47.619 6.35 0.00 42.66 1.52
394 395 2.476854 GCCGTTGCAGATGCTCTTAAAG 60.477 50.000 6.35 0.00 42.66 1.85
395 396 2.744202 CCGTTGCAGATGCTCTTAAAGT 59.256 45.455 6.35 0.00 42.66 2.66
396 397 3.425359 CCGTTGCAGATGCTCTTAAAGTG 60.425 47.826 6.35 0.00 42.66 3.16
397 398 3.187227 CGTTGCAGATGCTCTTAAAGTGT 59.813 43.478 6.35 0.00 42.66 3.55
398 399 4.470462 GTTGCAGATGCTCTTAAAGTGTG 58.530 43.478 6.35 0.00 42.66 3.82
399 400 4.006780 TGCAGATGCTCTTAAAGTGTGA 57.993 40.909 6.35 0.00 42.66 3.58
400 401 3.748048 TGCAGATGCTCTTAAAGTGTGAC 59.252 43.478 6.35 0.00 42.66 3.67
401 402 3.126000 GCAGATGCTCTTAAAGTGTGACC 59.874 47.826 0.00 0.00 38.21 4.02
402 403 3.369147 CAGATGCTCTTAAAGTGTGACCG 59.631 47.826 0.00 0.00 0.00 4.79
403 404 3.258372 AGATGCTCTTAAAGTGTGACCGA 59.742 43.478 0.00 0.00 0.00 4.69
404 405 3.026630 TGCTCTTAAAGTGTGACCGAG 57.973 47.619 0.00 0.00 0.00 4.63
405 406 2.364324 TGCTCTTAAAGTGTGACCGAGT 59.636 45.455 0.00 0.00 0.00 4.18
406 407 3.181469 TGCTCTTAAAGTGTGACCGAGTT 60.181 43.478 0.00 0.00 0.00 3.01
407 408 3.808174 GCTCTTAAAGTGTGACCGAGTTT 59.192 43.478 0.00 0.00 0.00 2.66
408 409 4.318831 GCTCTTAAAGTGTGACCGAGTTTG 60.319 45.833 0.00 0.00 0.00 2.93
409 410 3.558418 TCTTAAAGTGTGACCGAGTTTGC 59.442 43.478 0.00 0.00 0.00 3.68
410 411 0.655733 AAAGTGTGACCGAGTTTGCG 59.344 50.000 0.00 0.00 0.00 4.85
411 412 1.772063 AAGTGTGACCGAGTTTGCGC 61.772 55.000 0.00 0.00 0.00 6.09
412 413 2.202946 TGTGACCGAGTTTGCGCA 60.203 55.556 5.66 5.66 0.00 6.09
413 414 1.815840 TGTGACCGAGTTTGCGCAA 60.816 52.632 21.02 21.02 0.00 4.85
414 415 1.353804 GTGACCGAGTTTGCGCAAA 59.646 52.632 30.63 30.63 0.00 3.68
415 416 0.248296 GTGACCGAGTTTGCGCAAAA 60.248 50.000 35.09 16.62 31.33 2.44
416 417 0.452184 TGACCGAGTTTGCGCAAAAA 59.548 45.000 35.09 14.23 31.33 1.94
417 418 1.066303 TGACCGAGTTTGCGCAAAAAT 59.934 42.857 35.09 26.30 31.33 1.82
418 419 2.290916 TGACCGAGTTTGCGCAAAAATA 59.709 40.909 35.09 13.00 31.33 1.40
419 420 3.057876 TGACCGAGTTTGCGCAAAAATAT 60.058 39.130 35.09 21.42 31.33 1.28
420 421 3.241701 ACCGAGTTTGCGCAAAAATATG 58.758 40.909 35.09 23.40 31.33 1.78
421 422 3.241701 CCGAGTTTGCGCAAAAATATGT 58.758 40.909 35.09 16.29 31.33 2.29
422 423 3.300590 CCGAGTTTGCGCAAAAATATGTC 59.699 43.478 35.09 21.06 31.33 3.06
423 424 3.911365 CGAGTTTGCGCAAAAATATGTCA 59.089 39.130 35.09 9.32 31.33 3.58
424 425 4.381270 CGAGTTTGCGCAAAAATATGTCAA 59.619 37.500 35.09 8.51 31.33 3.18
425 426 5.441872 CGAGTTTGCGCAAAAATATGTCAAG 60.442 40.000 35.09 15.13 31.33 3.02
426 427 4.685628 AGTTTGCGCAAAAATATGTCAAGG 59.314 37.500 35.09 0.00 31.33 3.61
427 428 2.605030 TGCGCAAAAATATGTCAAGGC 58.395 42.857 8.16 0.00 0.00 4.35
428 429 2.230992 TGCGCAAAAATATGTCAAGGCT 59.769 40.909 8.16 0.00 0.00 4.58
429 430 3.253230 GCGCAAAAATATGTCAAGGCTT 58.747 40.909 0.30 0.00 0.00 4.35
430 431 3.061161 GCGCAAAAATATGTCAAGGCTTG 59.939 43.478 21.17 21.17 0.00 4.01
431 432 4.236935 CGCAAAAATATGTCAAGGCTTGT 58.763 39.130 25.39 10.37 0.00 3.16
432 433 4.090354 CGCAAAAATATGTCAAGGCTTGTG 59.910 41.667 25.39 14.35 0.00 3.33
433 434 5.229423 GCAAAAATATGTCAAGGCTTGTGA 58.771 37.500 25.39 14.16 0.00 3.58
434 435 5.695816 GCAAAAATATGTCAAGGCTTGTGAA 59.304 36.000 25.39 13.29 0.00 3.18
435 436 6.202570 GCAAAAATATGTCAAGGCTTGTGAAA 59.797 34.615 25.39 11.48 0.00 2.69
436 437 7.254727 GCAAAAATATGTCAAGGCTTGTGAAAA 60.255 33.333 25.39 10.17 0.00 2.29
437 438 7.713764 AAAATATGTCAAGGCTTGTGAAAAC 57.286 32.000 25.39 16.46 0.00 2.43
438 439 6.403866 AATATGTCAAGGCTTGTGAAAACA 57.596 33.333 25.39 21.11 0.00 2.83
439 440 4.734398 ATGTCAAGGCTTGTGAAAACAA 57.266 36.364 25.39 8.40 0.00 2.83
440 441 4.527509 TGTCAAGGCTTGTGAAAACAAA 57.472 36.364 25.39 1.21 0.00 2.83
441 442 5.083533 TGTCAAGGCTTGTGAAAACAAAT 57.916 34.783 25.39 0.00 0.00 2.32
442 443 6.214191 TGTCAAGGCTTGTGAAAACAAATA 57.786 33.333 25.39 0.00 0.00 1.40
443 444 6.272318 TGTCAAGGCTTGTGAAAACAAATAG 58.728 36.000 25.39 0.00 0.00 1.73
444 445 5.691754 GTCAAGGCTTGTGAAAACAAATAGG 59.308 40.000 25.39 0.00 0.00 2.57
445 446 5.362430 TCAAGGCTTGTGAAAACAAATAGGT 59.638 36.000 25.39 0.00 0.00 3.08
446 447 6.547880 TCAAGGCTTGTGAAAACAAATAGGTA 59.452 34.615 25.39 0.00 0.00 3.08
447 448 7.232534 TCAAGGCTTGTGAAAACAAATAGGTAT 59.767 33.333 25.39 0.00 0.00 2.73
448 449 8.519526 CAAGGCTTGTGAAAACAAATAGGTATA 58.480 33.333 19.07 0.00 0.00 1.47
449 450 8.823220 AGGCTTGTGAAAACAAATAGGTATAT 57.177 30.769 0.00 0.00 0.00 0.86
450 451 9.914834 AGGCTTGTGAAAACAAATAGGTATATA 57.085 29.630 0.00 0.00 0.00 0.86
486 487 9.617975 GAAATCTAATGCTACTAATTTGATGGC 57.382 33.333 0.00 0.00 32.33 4.40
487 488 8.696043 AATCTAATGCTACTAATTTGATGGCA 57.304 30.769 0.00 0.00 32.33 4.92
488 489 8.874744 ATCTAATGCTACTAATTTGATGGCAT 57.125 30.769 0.00 0.00 40.04 4.40
489 490 9.964354 ATCTAATGCTACTAATTTGATGGCATA 57.036 29.630 0.00 0.00 37.85 3.14
490 491 9.440773 TCTAATGCTACTAATTTGATGGCATAG 57.559 33.333 0.00 0.00 37.85 2.23
491 492 9.440773 CTAATGCTACTAATTTGATGGCATAGA 57.559 33.333 0.00 0.00 37.85 1.98
492 493 8.874744 AATGCTACTAATTTGATGGCATAGAT 57.125 30.769 0.00 0.00 37.85 1.98
493 494 7.677454 TGCTACTAATTTGATGGCATAGATG 57.323 36.000 0.00 0.00 0.00 2.90
494 495 7.226441 TGCTACTAATTTGATGGCATAGATGT 58.774 34.615 0.00 0.00 0.00 3.06
495 496 7.720957 TGCTACTAATTTGATGGCATAGATGTT 59.279 33.333 0.00 0.00 0.00 2.71
496 497 8.019669 GCTACTAATTTGATGGCATAGATGTTG 58.980 37.037 0.00 0.00 0.00 3.33
497 498 7.281040 ACTAATTTGATGGCATAGATGTTGG 57.719 36.000 0.00 0.00 0.00 3.77
498 499 6.835488 ACTAATTTGATGGCATAGATGTTGGT 59.165 34.615 0.00 0.00 0.00 3.67
499 500 5.779529 ATTTGATGGCATAGATGTTGGTC 57.220 39.130 0.00 0.00 0.00 4.02
500 501 4.508551 TTGATGGCATAGATGTTGGTCT 57.491 40.909 0.00 0.00 0.00 3.85
501 502 5.628797 TTGATGGCATAGATGTTGGTCTA 57.371 39.130 0.00 0.00 35.33 2.59
502 503 5.830799 TGATGGCATAGATGTTGGTCTAT 57.169 39.130 0.00 0.00 41.03 1.98
503 504 6.191657 TGATGGCATAGATGTTGGTCTATT 57.808 37.500 0.00 0.00 38.93 1.73
504 505 7.315066 TGATGGCATAGATGTTGGTCTATTA 57.685 36.000 0.00 0.00 38.93 0.98
505 506 7.921304 TGATGGCATAGATGTTGGTCTATTAT 58.079 34.615 0.00 0.00 38.93 1.28
506 507 8.385491 TGATGGCATAGATGTTGGTCTATTATT 58.615 33.333 0.00 0.00 38.93 1.40
507 508 7.984422 TGGCATAGATGTTGGTCTATTATTG 57.016 36.000 0.00 0.00 38.93 1.90
508 509 7.517320 TGGCATAGATGTTGGTCTATTATTGT 58.483 34.615 0.00 0.00 38.93 2.71
509 510 8.655901 TGGCATAGATGTTGGTCTATTATTGTA 58.344 33.333 0.00 0.00 38.93 2.41
510 511 9.672673 GGCATAGATGTTGGTCTATTATTGTAT 57.327 33.333 0.00 0.00 38.93 2.29
555 556 7.806149 AAGTTTAACTTTCCAACAAAGTTCG 57.194 32.000 14.20 0.00 44.50 3.95
556 557 7.148355 AGTTTAACTTTCCAACAAAGTTCGA 57.852 32.000 14.20 4.45 44.50 3.71
557 558 7.595604 AGTTTAACTTTCCAACAAAGTTCGAA 58.404 30.769 14.20 0.00 44.50 3.71
558 559 7.753580 AGTTTAACTTTCCAACAAAGTTCGAAG 59.246 33.333 14.20 1.34 44.50 3.79
559 560 5.638596 AACTTTCCAACAAAGTTCGAAGT 57.361 34.783 0.00 0.00 44.50 3.01
560 561 6.746745 AACTTTCCAACAAAGTTCGAAGTA 57.253 33.333 5.80 0.00 44.50 2.24
561 562 6.115450 ACTTTCCAACAAAGTTCGAAGTAC 57.885 37.500 5.80 0.00 37.18 2.73
562 563 5.644636 ACTTTCCAACAAAGTTCGAAGTACA 59.355 36.000 5.80 0.00 37.18 2.90
563 564 5.473796 TTCCAACAAAGTTCGAAGTACAC 57.526 39.130 5.80 0.00 0.00 2.90
564 565 3.872771 TCCAACAAAGTTCGAAGTACACC 59.127 43.478 5.80 0.00 0.00 4.16
565 566 3.002965 CCAACAAAGTTCGAAGTACACCC 59.997 47.826 5.80 0.00 0.00 4.61
566 567 3.832615 ACAAAGTTCGAAGTACACCCT 57.167 42.857 5.80 0.00 0.00 4.34
567 568 4.146745 ACAAAGTTCGAAGTACACCCTT 57.853 40.909 5.80 0.00 0.00 3.95
568 569 4.520179 ACAAAGTTCGAAGTACACCCTTT 58.480 39.130 5.80 4.00 0.00 3.11
569 570 4.573607 ACAAAGTTCGAAGTACACCCTTTC 59.426 41.667 5.80 0.00 0.00 2.62
570 571 4.411256 AAGTTCGAAGTACACCCTTTCA 57.589 40.909 5.80 0.00 0.00 2.69
571 572 4.411256 AGTTCGAAGTACACCCTTTCAA 57.589 40.909 2.97 0.00 0.00 2.69
572 573 4.377897 AGTTCGAAGTACACCCTTTCAAG 58.622 43.478 2.97 0.00 0.00 3.02
573 574 3.396260 TCGAAGTACACCCTTTCAAGG 57.604 47.619 0.00 0.00 46.06 3.61
591 592 2.759355 AGGACAGGGGAATACAATCGA 58.241 47.619 0.00 0.00 0.00 3.59
594 595 3.467803 GACAGGGGAATACAATCGAAGG 58.532 50.000 0.00 0.00 0.00 3.46
665 666 5.919755 TGTTGTGTTGTGTCCAGTTATCTA 58.080 37.500 0.00 0.00 0.00 1.98
754 756 8.907222 TTATTCTTTACCCGTTGTTCTAAGTT 57.093 30.769 0.00 0.00 0.00 2.66
755 757 6.849588 TTCTTTACCCGTTGTTCTAAGTTC 57.150 37.500 0.00 0.00 0.00 3.01
757 759 5.987347 TCTTTACCCGTTGTTCTAAGTTCAG 59.013 40.000 0.00 0.00 0.00 3.02
760 762 3.875134 ACCCGTTGTTCTAAGTTCAGTTG 59.125 43.478 0.00 0.00 0.00 3.16
764 766 5.050972 CCGTTGTTCTAAGTTCAGTTGTCTC 60.051 44.000 0.00 0.00 0.00 3.36
766 768 6.074782 CGTTGTTCTAAGTTCAGTTGTCTCTC 60.075 42.308 0.00 0.00 0.00 3.20
771 773 7.776618 TCTAAGTTCAGTTGTCTCTCCATTA 57.223 36.000 0.00 0.00 0.00 1.90
779 781 4.716784 AGTTGTCTCTCCATTATACTGGCA 59.283 41.667 4.23 0.00 36.16 4.92
781 783 5.474578 TGTCTCTCCATTATACTGGCATC 57.525 43.478 4.23 0.00 36.16 3.91
782 784 4.901250 TGTCTCTCCATTATACTGGCATCA 59.099 41.667 4.23 0.00 36.16 3.07
783 785 5.366477 TGTCTCTCCATTATACTGGCATCAA 59.634 40.000 4.23 0.00 36.16 2.57
784 786 6.126796 TGTCTCTCCATTATACTGGCATCAAA 60.127 38.462 4.23 0.00 36.16 2.69
785 787 6.426328 GTCTCTCCATTATACTGGCATCAAAG 59.574 42.308 4.23 0.00 36.16 2.77
786 788 6.327365 TCTCTCCATTATACTGGCATCAAAGA 59.673 38.462 4.23 0.99 36.16 2.52
788 790 6.938596 TCTCCATTATACTGGCATCAAAGATG 59.061 38.462 4.23 2.71 36.16 2.90
789 791 6.604171 TCCATTATACTGGCATCAAAGATGT 58.396 36.000 4.23 0.00 36.16 3.06
790 792 6.712095 TCCATTATACTGGCATCAAAGATGTC 59.288 38.462 4.23 4.73 36.16 3.06
792 794 2.885135 ACTGGCATCAAAGATGTCCA 57.115 45.000 16.55 16.55 0.00 4.02
794 796 3.087031 ACTGGCATCAAAGATGTCCAAG 58.913 45.455 17.48 9.61 0.00 3.61
796 798 2.225091 TGGCATCAAAGATGTCCAAGGT 60.225 45.455 15.72 0.00 0.00 3.50
797 799 2.165030 GGCATCAAAGATGTCCAAGGTG 59.835 50.000 8.60 0.00 0.00 4.00
798 800 2.821969 GCATCAAAGATGTCCAAGGTGT 59.178 45.455 8.60 0.00 0.00 4.16
799 801 3.366679 GCATCAAAGATGTCCAAGGTGTG 60.367 47.826 8.60 0.00 0.00 3.82
801 803 3.897239 TCAAAGATGTCCAAGGTGTGTT 58.103 40.909 0.00 0.00 0.00 3.32
802 804 3.882888 TCAAAGATGTCCAAGGTGTGTTC 59.117 43.478 0.00 0.00 0.00 3.18
803 805 3.576078 AAGATGTCCAAGGTGTGTTCA 57.424 42.857 0.00 0.00 0.00 3.18
804 806 3.795688 AGATGTCCAAGGTGTGTTCAT 57.204 42.857 0.00 0.00 0.00 2.57
806 808 4.473444 AGATGTCCAAGGTGTGTTCATTT 58.527 39.130 0.00 0.00 0.00 2.32
807 809 5.630121 AGATGTCCAAGGTGTGTTCATTTA 58.370 37.500 0.00 0.00 0.00 1.40
810 812 6.531503 TGTCCAAGGTGTGTTCATTTAAAA 57.468 33.333 0.00 0.00 0.00 1.52
909 927 1.792949 CTTGCGCGGGTGATAAGATAC 59.207 52.381 8.83 0.00 0.00 2.24
911 929 2.232399 TGCGCGGGTGATAAGATACTA 58.768 47.619 8.83 0.00 0.00 1.82
1058 1092 1.330829 TGCTCGATCACTACGCACTAG 59.669 52.381 0.00 0.00 0.00 2.57
1233 1290 4.437587 CCTGCCCAAGCCTCCAGG 62.438 72.222 0.00 0.00 38.93 4.45
1511 1672 1.551452 CTTCTTCCCTCTCGACAGGT 58.449 55.000 5.96 0.00 0.00 4.00
1787 7173 1.219124 GGCAAGCTCGAGGACATCA 59.781 57.895 15.58 0.00 0.00 3.07
2497 7943 4.517453 GTGGGCGTGGCTGATTAATAATTA 59.483 41.667 0.00 0.00 0.00 1.40
2509 7955 7.809806 GCTGATTAATAATTATGCCGCTTTCTT 59.190 33.333 0.00 0.00 0.00 2.52
2591 8041 9.482627 CACTGTGTCTTTTCTTTTCTCTATACT 57.517 33.333 0.00 0.00 0.00 2.12
2622 8072 2.869233 TCTGTTTGGCTTGTCTTTGC 57.131 45.000 0.00 0.00 0.00 3.68
2623 8073 2.098614 TCTGTTTGGCTTGTCTTTGCA 58.901 42.857 0.00 0.00 0.00 4.08
2624 8074 2.495270 TCTGTTTGGCTTGTCTTTGCAA 59.505 40.909 0.00 0.00 0.00 4.08
2625 8075 3.056250 TCTGTTTGGCTTGTCTTTGCAAA 60.056 39.130 12.14 12.14 0.00 3.68
2626 8076 3.668447 TGTTTGGCTTGTCTTTGCAAAA 58.332 36.364 13.84 1.75 30.57 2.44
2627 8077 4.067896 TGTTTGGCTTGTCTTTGCAAAAA 58.932 34.783 13.84 3.99 34.39 1.94
2628 8078 4.699257 TGTTTGGCTTGTCTTTGCAAAAAT 59.301 33.333 13.84 0.00 34.39 1.82
2629 8079 5.877012 TGTTTGGCTTGTCTTTGCAAAAATA 59.123 32.000 13.84 0.00 34.39 1.40
2630 8080 6.372659 TGTTTGGCTTGTCTTTGCAAAAATAA 59.627 30.769 13.84 3.82 34.39 1.40
2631 8081 7.066766 TGTTTGGCTTGTCTTTGCAAAAATAAT 59.933 29.630 13.84 0.00 34.39 1.28
2687 8137 8.871629 TTATAGGTCAAAGCTAAATCAAACCA 57.128 30.769 0.00 0.00 31.35 3.67
2699 8149 5.885449 AAATCAAACCATGAACTCCCAAA 57.115 34.783 0.00 0.00 42.54 3.28
2721 8171 4.091549 ACCCTGAAATCAGCACATCAAAT 58.908 39.130 4.87 0.00 42.47 2.32
2748 8198 8.202137 TCTCTAATCCTGGTCTATTTTAAACCG 58.798 37.037 0.00 0.00 35.76 4.44
2750 8200 8.980596 TCTAATCCTGGTCTATTTTAAACCGTA 58.019 33.333 0.00 0.00 35.76 4.02
2755 8205 7.178983 TCCTGGTCTATTTTAAACCGTAAGAGA 59.821 37.037 0.00 0.00 43.02 3.10
2820 8305 1.148310 GCTCACGCTGCTCTTGTTTA 58.852 50.000 0.00 0.00 0.00 2.01
2831 8319 6.129352 CGCTGCTCTTGTTTATCTTTGTTTTC 60.129 38.462 0.00 0.00 0.00 2.29
2871 8378 9.316730 TCTTTGGTTTTTCATCAATTTCTTCTG 57.683 29.630 0.00 0.00 0.00 3.02
2967 8516 7.499321 TCGCTTCTATTTTGTTTCTTTACCA 57.501 32.000 0.00 0.00 0.00 3.25
3043 8593 6.851609 ACATTTTTAGCGCAGACATGAAATA 58.148 32.000 11.47 0.00 0.00 1.40
3217 8807 8.898761 ACATGAACAGTTCTTTACATTGTTACA 58.101 29.630 14.51 0.00 32.58 2.41
3218 8808 9.729023 CATGAACAGTTCTTTACATTGTTACAA 57.271 29.630 14.51 0.00 32.58 2.41
3317 8913 6.957631 AGGTATGACACATTTCCTACATCAA 58.042 36.000 0.00 0.00 0.00 2.57
3442 9066 9.716531 TTTTGAAATGCCACATACATTTTATGA 57.283 25.926 3.49 0.00 45.33 2.15
3443 9067 9.716531 TTTGAAATGCCACATACATTTTATGAA 57.283 25.926 3.49 0.00 45.33 2.57
3444 9068 9.887629 TTGAAATGCCACATACATTTTATGAAT 57.112 25.926 3.49 0.00 45.33 2.57
3445 9069 9.531942 TGAAATGCCACATACATTTTATGAATC 57.468 29.630 3.49 0.00 45.33 2.52
3446 9070 9.531942 GAAATGCCACATACATTTTATGAATCA 57.468 29.630 3.49 0.00 45.33 2.57
3447 9071 8.876275 AATGCCACATACATTTTATGAATCAC 57.124 30.769 0.00 0.00 34.05 3.06
3448 9072 7.401955 TGCCACATACATTTTATGAATCACA 57.598 32.000 0.00 0.00 0.00 3.58
3449 9073 7.257003 TGCCACATACATTTTATGAATCACAC 58.743 34.615 0.00 0.00 0.00 3.82
3450 9074 6.414694 GCCACATACATTTTATGAATCACACG 59.585 38.462 0.00 0.00 0.00 4.49
3451 9075 7.678454 GCCACATACATTTTATGAATCACACGA 60.678 37.037 0.00 0.00 0.00 4.35
3452 9076 8.180920 CCACATACATTTTATGAATCACACGAA 58.819 33.333 0.00 0.00 0.00 3.85
3453 9077 9.553418 CACATACATTTTATGAATCACACGAAA 57.447 29.630 0.00 0.00 0.00 3.46
3458 9082 9.474920 ACATTTTATGAATCACACGAAAATTGT 57.525 25.926 0.00 0.00 36.29 2.71
3464 9088 7.332003 TGAATCACACGAAAATTGTTTATGC 57.668 32.000 0.00 0.00 0.00 3.14
3465 9089 7.144661 TGAATCACACGAAAATTGTTTATGCT 58.855 30.769 0.00 0.00 0.00 3.79
3466 9090 7.651304 TGAATCACACGAAAATTGTTTATGCTT 59.349 29.630 0.00 0.00 0.00 3.91
3467 9091 9.123709 GAATCACACGAAAATTGTTTATGCTTA 57.876 29.630 0.00 0.00 0.00 3.09
3468 9092 8.673626 ATCACACGAAAATTGTTTATGCTTAG 57.326 30.769 0.00 0.00 0.00 2.18
3469 9093 7.866729 TCACACGAAAATTGTTTATGCTTAGA 58.133 30.769 0.00 0.00 0.00 2.10
3470 9094 8.346300 TCACACGAAAATTGTTTATGCTTAGAA 58.654 29.630 0.00 0.00 0.00 2.10
3471 9095 9.128107 CACACGAAAATTGTTTATGCTTAGAAT 57.872 29.630 0.00 0.00 0.00 2.40
3482 9106 9.364989 TGTTTATGCTTAGAATATTTGTTTGCC 57.635 29.630 0.00 0.00 0.00 4.52
3483 9107 9.364989 GTTTATGCTTAGAATATTTGTTTGCCA 57.635 29.630 0.00 0.00 0.00 4.92
3484 9108 8.925161 TTATGCTTAGAATATTTGTTTGCCAC 57.075 30.769 0.00 0.00 0.00 5.01
3485 9109 6.588719 TGCTTAGAATATTTGTTTGCCACT 57.411 33.333 0.00 0.00 0.00 4.00
3486 9110 7.695480 TGCTTAGAATATTTGTTTGCCACTA 57.305 32.000 0.00 0.00 0.00 2.74
3487 9111 8.116651 TGCTTAGAATATTTGTTTGCCACTAA 57.883 30.769 0.00 0.00 0.00 2.24
3488 9112 8.580720 TGCTTAGAATATTTGTTTGCCACTAAA 58.419 29.630 0.00 0.00 0.00 1.85
3489 9113 9.418045 GCTTAGAATATTTGTTTGCCACTAAAA 57.582 29.630 0.00 0.00 0.00 1.52
3513 9137 9.838975 AAAAACATTTCCAAATTTCAACACTTC 57.161 25.926 0.00 0.00 0.00 3.01
3514 9138 8.558973 AAACATTTCCAAATTTCAACACTTCA 57.441 26.923 0.00 0.00 0.00 3.02
3515 9139 7.775397 ACATTTCCAAATTTCAACACTTCAG 57.225 32.000 0.00 0.00 0.00 3.02
3516 9140 7.330262 ACATTTCCAAATTTCAACACTTCAGT 58.670 30.769 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.535150 CGTCAGAGATTAGGAATTGCACTAAA 59.465 38.462 0.00 0.00 33.36 1.85
6 7 6.042777 CGTCAGAGATTAGGAATTGCACTAA 58.957 40.000 0.00 0.00 34.07 2.24
7 8 5.451937 CCGTCAGAGATTAGGAATTGCACTA 60.452 44.000 0.00 0.00 0.00 2.74
8 9 4.437239 CGTCAGAGATTAGGAATTGCACT 58.563 43.478 0.00 0.00 0.00 4.40
9 10 3.557595 CCGTCAGAGATTAGGAATTGCAC 59.442 47.826 0.00 0.00 0.00 4.57
11 12 3.804873 GTCCGTCAGAGATTAGGAATTGC 59.195 47.826 0.00 0.00 32.20 3.56
12 13 4.045104 CGTCCGTCAGAGATTAGGAATTG 58.955 47.826 0.00 0.00 32.20 2.32
13 14 3.952323 TCGTCCGTCAGAGATTAGGAATT 59.048 43.478 0.00 0.00 32.20 2.17
14 15 3.552875 TCGTCCGTCAGAGATTAGGAAT 58.447 45.455 0.00 0.00 32.20 3.01
15 16 2.995283 TCGTCCGTCAGAGATTAGGAA 58.005 47.619 0.00 0.00 32.20 3.36
16 17 2.704464 TCGTCCGTCAGAGATTAGGA 57.296 50.000 0.00 0.00 0.00 2.94
17 18 2.619177 ACATCGTCCGTCAGAGATTAGG 59.381 50.000 0.00 0.00 0.00 2.69
18 19 3.972950 ACATCGTCCGTCAGAGATTAG 57.027 47.619 0.00 0.00 0.00 1.73
19 20 4.449131 AGTACATCGTCCGTCAGAGATTA 58.551 43.478 0.00 0.00 0.00 1.75
20 21 3.280295 AGTACATCGTCCGTCAGAGATT 58.720 45.455 0.00 0.00 0.00 2.40
21 22 2.873472 GAGTACATCGTCCGTCAGAGAT 59.127 50.000 0.00 0.00 0.00 2.75
22 23 2.277969 GAGTACATCGTCCGTCAGAGA 58.722 52.381 0.00 0.00 0.00 3.10
23 24 2.007608 TGAGTACATCGTCCGTCAGAG 58.992 52.381 0.00 0.00 0.00 3.35
24 25 1.736126 GTGAGTACATCGTCCGTCAGA 59.264 52.381 0.00 0.00 0.00 3.27
25 26 1.738350 AGTGAGTACATCGTCCGTCAG 59.262 52.381 0.00 0.00 0.00 3.51
26 27 1.736126 GAGTGAGTACATCGTCCGTCA 59.264 52.381 0.00 0.00 0.00 4.35
27 28 2.008329 AGAGTGAGTACATCGTCCGTC 58.992 52.381 0.00 0.00 0.00 4.79
28 29 1.738350 CAGAGTGAGTACATCGTCCGT 59.262 52.381 0.00 0.00 0.00 4.69
29 30 1.532090 GCAGAGTGAGTACATCGTCCG 60.532 57.143 0.00 0.00 0.00 4.79
30 31 1.202313 GGCAGAGTGAGTACATCGTCC 60.202 57.143 0.00 0.00 0.00 4.79
31 32 1.202313 GGGCAGAGTGAGTACATCGTC 60.202 57.143 0.00 0.00 0.00 4.20
32 33 0.818296 GGGCAGAGTGAGTACATCGT 59.182 55.000 0.00 0.00 0.00 3.73
33 34 1.107114 AGGGCAGAGTGAGTACATCG 58.893 55.000 0.00 0.00 0.00 3.84
34 35 2.497675 TCAAGGGCAGAGTGAGTACATC 59.502 50.000 0.00 0.00 0.00 3.06
35 36 2.540383 TCAAGGGCAGAGTGAGTACAT 58.460 47.619 0.00 0.00 0.00 2.29
36 37 2.009681 TCAAGGGCAGAGTGAGTACA 57.990 50.000 0.00 0.00 0.00 2.90
37 38 3.006967 TCTTTCAAGGGCAGAGTGAGTAC 59.993 47.826 0.00 0.00 0.00 2.73
38 39 3.239449 TCTTTCAAGGGCAGAGTGAGTA 58.761 45.455 0.00 0.00 0.00 2.59
39 40 2.038295 CTCTTTCAAGGGCAGAGTGAGT 59.962 50.000 0.00 0.00 31.07 3.41
40 41 2.038295 ACTCTTTCAAGGGCAGAGTGAG 59.962 50.000 2.48 3.87 44.57 3.51
41 42 2.050144 ACTCTTTCAAGGGCAGAGTGA 58.950 47.619 2.48 0.00 44.57 3.41
42 43 2.557920 ACTCTTTCAAGGGCAGAGTG 57.442 50.000 2.48 0.00 44.57 3.51
43 44 1.771255 ACACTCTTTCAAGGGCAGAGT 59.229 47.619 0.00 0.00 46.73 3.24
44 45 2.557920 ACACTCTTTCAAGGGCAGAG 57.442 50.000 0.00 0.00 40.08 3.35
45 46 2.972713 AGTACACTCTTTCAAGGGCAGA 59.027 45.455 0.00 0.00 0.00 4.26
46 47 3.409026 AGTACACTCTTTCAAGGGCAG 57.591 47.619 0.00 0.00 0.00 4.85
47 48 3.496160 GGAAGTACACTCTTTCAAGGGCA 60.496 47.826 0.00 0.00 0.00 5.36
48 49 3.075148 GGAAGTACACTCTTTCAAGGGC 58.925 50.000 0.00 0.00 0.00 5.19
49 50 4.351874 TGGAAGTACACTCTTTCAAGGG 57.648 45.455 0.00 0.00 30.93 3.95
50 51 5.368989 AGTTGGAAGTACACTCTTTCAAGG 58.631 41.667 0.00 0.00 41.68 3.61
51 52 6.927294 AAGTTGGAAGTACACTCTTTCAAG 57.073 37.500 0.00 0.00 41.68 3.02
52 53 6.657541 ACAAAGTTGGAAGTACACTCTTTCAA 59.342 34.615 0.00 0.00 39.65 2.69
53 54 6.177610 ACAAAGTTGGAAGTACACTCTTTCA 58.822 36.000 0.00 0.00 31.87 2.69
54 55 6.679327 ACAAAGTTGGAAGTACACTCTTTC 57.321 37.500 0.00 0.00 0.00 2.62
55 56 6.127730 CCAACAAAGTTGGAAGTACACTCTTT 60.128 38.462 21.24 0.00 42.06 2.52
56 57 5.357032 CCAACAAAGTTGGAAGTACACTCTT 59.643 40.000 21.24 0.00 42.06 2.85
57 58 4.881850 CCAACAAAGTTGGAAGTACACTCT 59.118 41.667 21.24 0.00 42.06 3.24
58 59 4.879545 TCCAACAAAGTTGGAAGTACACTC 59.120 41.667 24.83 0.00 44.90 3.51
59 60 4.850680 TCCAACAAAGTTGGAAGTACACT 58.149 39.130 24.83 0.00 44.90 3.55
60 61 4.036380 CCTCCAACAAAGTTGGAAGTACAC 59.964 45.833 26.25 0.00 46.85 2.90
61 62 4.080243 TCCTCCAACAAAGTTGGAAGTACA 60.080 41.667 26.25 8.75 46.85 2.90
62 63 4.457466 TCCTCCAACAAAGTTGGAAGTAC 58.543 43.478 26.25 0.00 46.85 2.73
63 64 4.781775 TCCTCCAACAAAGTTGGAAGTA 57.218 40.909 26.25 14.97 46.85 2.24
64 65 3.662759 TCCTCCAACAAAGTTGGAAGT 57.337 42.857 26.25 0.00 46.85 3.01
65 66 4.144297 TGATCCTCCAACAAAGTTGGAAG 58.856 43.478 26.25 21.83 46.85 3.46
66 67 4.177537 TGATCCTCCAACAAAGTTGGAA 57.822 40.909 26.25 16.44 46.85 3.53
67 68 3.874383 TGATCCTCCAACAAAGTTGGA 57.126 42.857 25.17 25.17 45.61 3.53
68 69 4.342092 AGTTTGATCCTCCAACAAAGTTGG 59.658 41.667 20.09 20.09 40.87 3.77
69 70 5.520376 AGTTTGATCCTCCAACAAAGTTG 57.480 39.130 3.00 3.00 34.79 3.16
70 71 7.234355 AGATAGTTTGATCCTCCAACAAAGTT 58.766 34.615 0.00 0.00 37.95 2.66
71 72 6.784031 AGATAGTTTGATCCTCCAACAAAGT 58.216 36.000 0.00 0.00 39.45 2.66
72 73 7.693969 AAGATAGTTTGATCCTCCAACAAAG 57.306 36.000 0.00 0.00 34.86 2.77
73 74 8.602424 TCTAAGATAGTTTGATCCTCCAACAAA 58.398 33.333 0.00 0.00 0.00 2.83
74 75 8.146053 TCTAAGATAGTTTGATCCTCCAACAA 57.854 34.615 0.00 0.00 0.00 2.83
75 76 7.633772 GCTCTAAGATAGTTTGATCCTCCAACA 60.634 40.741 0.00 0.00 0.00 3.33
76 77 6.704050 GCTCTAAGATAGTTTGATCCTCCAAC 59.296 42.308 0.00 0.00 0.00 3.77
77 78 6.384015 TGCTCTAAGATAGTTTGATCCTCCAA 59.616 38.462 0.00 0.00 0.00 3.53
78 79 5.899547 TGCTCTAAGATAGTTTGATCCTCCA 59.100 40.000 0.00 0.00 0.00 3.86
79 80 6.412362 TGCTCTAAGATAGTTTGATCCTCC 57.588 41.667 0.00 0.00 0.00 4.30
80 81 7.895759 AGATGCTCTAAGATAGTTTGATCCTC 58.104 38.462 0.00 0.00 0.00 3.71
81 82 7.039082 GGAGATGCTCTAAGATAGTTTGATCCT 60.039 40.741 0.00 0.00 0.00 3.24
82 83 7.096551 GGAGATGCTCTAAGATAGTTTGATCC 58.903 42.308 0.00 0.00 0.00 3.36
83 84 7.665690 TGGAGATGCTCTAAGATAGTTTGATC 58.334 38.462 0.00 0.00 0.00 2.92
84 85 7.609097 TGGAGATGCTCTAAGATAGTTTGAT 57.391 36.000 0.00 0.00 0.00 2.57
85 86 7.093333 TGTTGGAGATGCTCTAAGATAGTTTGA 60.093 37.037 0.00 0.00 31.92 2.69
86 87 7.044181 TGTTGGAGATGCTCTAAGATAGTTTG 58.956 38.462 0.00 0.00 31.92 2.93
87 88 7.187824 TGTTGGAGATGCTCTAAGATAGTTT 57.812 36.000 0.00 0.00 31.92 2.66
88 89 6.183360 CCTGTTGGAGATGCTCTAAGATAGTT 60.183 42.308 0.00 0.00 31.92 2.24
89 90 5.304101 CCTGTTGGAGATGCTCTAAGATAGT 59.696 44.000 0.00 0.00 31.92 2.12
90 91 5.782047 CCTGTTGGAGATGCTCTAAGATAG 58.218 45.833 0.00 0.00 31.92 2.08
91 92 4.039730 GCCTGTTGGAGATGCTCTAAGATA 59.960 45.833 0.00 0.00 31.92 1.98
92 93 3.181456 GCCTGTTGGAGATGCTCTAAGAT 60.181 47.826 0.00 0.00 31.92 2.40
93 94 2.169352 GCCTGTTGGAGATGCTCTAAGA 59.831 50.000 0.00 0.00 31.92 2.10
94 95 2.559440 GCCTGTTGGAGATGCTCTAAG 58.441 52.381 0.00 0.00 31.92 2.18
95 96 1.210478 GGCCTGTTGGAGATGCTCTAA 59.790 52.381 0.00 0.00 34.57 2.10
96 97 0.833287 GGCCTGTTGGAGATGCTCTA 59.167 55.000 0.00 0.00 34.57 2.43
97 98 1.606531 GGCCTGTTGGAGATGCTCT 59.393 57.895 0.00 0.00 34.57 4.09
98 99 1.452833 GGGCCTGTTGGAGATGCTC 60.453 63.158 0.84 0.00 34.57 4.26
99 100 1.792757 TTGGGCCTGTTGGAGATGCT 61.793 55.000 4.53 0.00 34.57 3.79
100 101 0.899717 TTTGGGCCTGTTGGAGATGC 60.900 55.000 4.53 0.00 34.57 3.91
101 102 1.631405 TTTTGGGCCTGTTGGAGATG 58.369 50.000 4.53 0.00 34.57 2.90
102 103 2.158325 TCTTTTTGGGCCTGTTGGAGAT 60.158 45.455 4.53 0.00 34.57 2.75
103 104 1.216678 TCTTTTTGGGCCTGTTGGAGA 59.783 47.619 4.53 0.00 34.57 3.71
104 105 1.615392 CTCTTTTTGGGCCTGTTGGAG 59.385 52.381 4.53 3.60 34.57 3.86
105 106 1.703411 CTCTTTTTGGGCCTGTTGGA 58.297 50.000 4.53 0.00 34.57 3.53
106 107 0.033920 GCTCTTTTTGGGCCTGTTGG 59.966 55.000 4.53 0.00 0.00 3.77
107 108 0.033920 GGCTCTTTTTGGGCCTGTTG 59.966 55.000 4.53 0.00 42.31 3.33
108 109 1.121407 GGGCTCTTTTTGGGCCTGTT 61.121 55.000 4.53 0.00 44.70 3.16
109 110 1.533994 GGGCTCTTTTTGGGCCTGT 60.534 57.895 4.53 0.00 44.70 4.00
110 111 2.285773 GGGGCTCTTTTTGGGCCTG 61.286 63.158 4.53 0.00 45.80 4.85
111 112 2.120496 GGGGCTCTTTTTGGGCCT 59.880 61.111 4.53 0.00 45.80 5.19
112 113 3.381983 CGGGGCTCTTTTTGGGCC 61.382 66.667 0.00 0.00 45.80 5.80
113 114 4.069232 GCGGGGCTCTTTTTGGGC 62.069 66.667 0.00 0.00 0.00 5.36
114 115 2.600173 TGCGGGGCTCTTTTTGGG 60.600 61.111 0.00 0.00 0.00 4.12
115 116 2.199652 TGTGCGGGGCTCTTTTTGG 61.200 57.895 0.00 0.00 0.00 3.28
116 117 1.007387 GTGTGCGGGGCTCTTTTTG 60.007 57.895 0.00 0.00 0.00 2.44
117 118 0.109723 TAGTGTGCGGGGCTCTTTTT 59.890 50.000 0.00 0.00 0.00 1.94
118 119 0.109723 TTAGTGTGCGGGGCTCTTTT 59.890 50.000 0.00 0.00 0.00 2.27
119 120 0.109723 TTTAGTGTGCGGGGCTCTTT 59.890 50.000 0.00 0.00 0.00 2.52
120 121 0.109723 TTTTAGTGTGCGGGGCTCTT 59.890 50.000 0.00 0.00 0.00 2.85
121 122 0.328258 ATTTTAGTGTGCGGGGCTCT 59.672 50.000 0.00 0.00 0.00 4.09
122 123 1.173913 AATTTTAGTGTGCGGGGCTC 58.826 50.000 0.00 0.00 0.00 4.70
123 124 1.627864 AAATTTTAGTGTGCGGGGCT 58.372 45.000 0.00 0.00 0.00 5.19
124 125 2.065512 CAAAATTTTAGTGTGCGGGGC 58.934 47.619 2.44 0.00 0.00 5.80
125 126 3.378911 ACAAAATTTTAGTGTGCGGGG 57.621 42.857 2.44 0.00 0.00 5.73
126 127 5.726729 AAAACAAAATTTTAGTGTGCGGG 57.273 34.783 2.44 0.00 0.00 6.13
147 148 4.277593 CTGTGCGGCGCCCAAAAA 62.278 61.111 30.82 6.28 0.00 1.94
157 158 3.677284 ATCTGCTGGAGCTGTGCGG 62.677 63.158 0.00 0.00 42.66 5.69
158 159 2.125229 ATCTGCTGGAGCTGTGCG 60.125 61.111 0.00 0.00 42.66 5.34
159 160 2.762234 GCATCTGCTGGAGCTGTGC 61.762 63.158 0.00 13.16 42.66 4.57
160 161 3.499050 GCATCTGCTGGAGCTGTG 58.501 61.111 0.00 2.79 42.66 3.66
170 171 1.290203 TTTAGCGCTACAGCATCTGC 58.710 50.000 18.63 0.00 42.21 4.26
171 172 2.932614 ACTTTTAGCGCTACAGCATCTG 59.067 45.455 18.63 4.43 42.21 2.90
172 173 3.252974 ACTTTTAGCGCTACAGCATCT 57.747 42.857 18.63 0.00 42.21 2.90
173 174 4.342352 AAACTTTTAGCGCTACAGCATC 57.658 40.909 18.63 0.00 42.21 3.91
174 175 4.766404 AAAACTTTTAGCGCTACAGCAT 57.234 36.364 18.63 6.29 42.21 3.79
175 176 4.286910 CAAAAACTTTTAGCGCTACAGCA 58.713 39.130 18.63 0.00 42.21 4.41
176 177 3.668656 CCAAAAACTTTTAGCGCTACAGC 59.331 43.478 18.63 0.00 37.78 4.40
177 178 4.226761 CCCAAAAACTTTTAGCGCTACAG 58.773 43.478 18.63 18.01 0.00 2.74
178 179 3.551250 GCCCAAAAACTTTTAGCGCTACA 60.551 43.478 18.63 8.18 0.00 2.74
179 180 2.984471 GCCCAAAAACTTTTAGCGCTAC 59.016 45.455 18.63 0.00 0.00 3.58
180 181 2.350964 CGCCCAAAAACTTTTAGCGCTA 60.351 45.455 14.45 14.45 41.67 4.26
181 182 1.601914 CGCCCAAAAACTTTTAGCGCT 60.602 47.619 17.26 17.26 41.67 5.92
182 183 0.781787 CGCCCAAAAACTTTTAGCGC 59.218 50.000 14.61 0.00 41.67 5.92
183 184 0.781787 GCGCCCAAAAACTTTTAGCG 59.218 50.000 19.34 19.34 46.24 4.26
184 185 0.781787 CGCGCCCAAAAACTTTTAGC 59.218 50.000 0.00 0.00 0.00 3.09
185 186 0.781787 GCGCGCCCAAAAACTTTTAG 59.218 50.000 23.24 0.00 0.00 1.85
186 187 0.935366 CGCGCGCCCAAAAACTTTTA 60.935 50.000 27.72 0.00 0.00 1.52
187 188 2.234335 CGCGCGCCCAAAAACTTTT 61.234 52.632 27.72 0.00 0.00 2.27
188 189 2.656973 CGCGCGCCCAAAAACTTT 60.657 55.556 27.72 0.00 0.00 2.66
216 217 3.220773 CAAAATATGCTGCGTGCGATAG 58.779 45.455 4.25 0.00 46.63 2.08
217 218 2.032117 CCAAAATATGCTGCGTGCGATA 60.032 45.455 4.25 0.00 46.63 2.92
218 219 1.268692 CCAAAATATGCTGCGTGCGAT 60.269 47.619 4.25 0.00 46.63 4.58
219 220 0.098552 CCAAAATATGCTGCGTGCGA 59.901 50.000 4.25 0.00 46.63 5.10
220 221 0.866906 CCCAAAATATGCTGCGTGCG 60.867 55.000 4.25 0.00 46.63 5.34
221 222 1.147557 GCCCAAAATATGCTGCGTGC 61.148 55.000 4.25 0.00 43.25 5.34
222 223 0.457035 AGCCCAAAATATGCTGCGTG 59.543 50.000 4.25 0.00 33.23 5.34
223 224 0.740737 GAGCCCAAAATATGCTGCGT 59.259 50.000 0.00 0.00 34.99 5.24
224 225 0.031178 GGAGCCCAAAATATGCTGCG 59.969 55.000 0.00 0.00 34.99 5.18
225 226 0.031178 CGGAGCCCAAAATATGCTGC 59.969 55.000 0.00 0.00 39.71 5.25
226 227 1.679139 TCGGAGCCCAAAATATGCTG 58.321 50.000 0.00 0.00 34.99 4.41
227 228 2.435372 TTCGGAGCCCAAAATATGCT 57.565 45.000 0.00 0.00 38.24 3.79
228 229 3.383761 CAATTCGGAGCCCAAAATATGC 58.616 45.455 0.00 0.00 0.00 3.14
229 230 3.383761 GCAATTCGGAGCCCAAAATATG 58.616 45.455 0.00 0.00 0.00 1.78
230 231 2.034558 CGCAATTCGGAGCCCAAAATAT 59.965 45.455 0.00 0.00 33.78 1.28
231 232 1.403679 CGCAATTCGGAGCCCAAAATA 59.596 47.619 0.00 0.00 33.78 1.40
232 233 0.173255 CGCAATTCGGAGCCCAAAAT 59.827 50.000 0.00 0.00 33.78 1.82
233 234 1.583986 CGCAATTCGGAGCCCAAAA 59.416 52.632 0.00 0.00 33.78 2.44
234 235 2.988688 GCGCAATTCGGAGCCCAAA 61.989 57.895 0.30 0.00 38.94 3.28
235 236 3.439540 GCGCAATTCGGAGCCCAA 61.440 61.111 0.30 0.00 38.94 4.12
249 250 2.800746 AAATTGTGAAGCGCGCGC 60.801 55.556 45.10 45.10 42.33 6.86
250 251 3.046460 GCAAATTGTGAAGCGCGCG 62.046 57.895 28.44 28.44 0.00 6.86
251 252 2.015627 TGCAAATTGTGAAGCGCGC 61.016 52.632 26.66 26.66 0.00 6.86
252 253 0.661187 AGTGCAAATTGTGAAGCGCG 60.661 50.000 0.00 0.00 41.96 6.86
253 254 0.780002 CAGTGCAAATTGTGAAGCGC 59.220 50.000 0.00 0.00 37.74 5.92
254 255 1.782569 CACAGTGCAAATTGTGAAGCG 59.217 47.619 17.68 0.00 45.79 4.68
255 256 2.536803 CACACAGTGCAAATTGTGAAGC 59.463 45.455 25.26 0.00 45.79 3.86
268 269 0.871163 CGCCCAAAAAGCACACAGTG 60.871 55.000 0.00 0.00 36.51 3.66
269 270 1.319614 ACGCCCAAAAAGCACACAGT 61.320 50.000 0.00 0.00 0.00 3.55
270 271 0.594796 GACGCCCAAAAAGCACACAG 60.595 55.000 0.00 0.00 0.00 3.66
271 272 1.034838 AGACGCCCAAAAAGCACACA 61.035 50.000 0.00 0.00 0.00 3.72
272 273 0.594796 CAGACGCCCAAAAAGCACAC 60.595 55.000 0.00 0.00 0.00 3.82
273 274 1.732917 CAGACGCCCAAAAAGCACA 59.267 52.632 0.00 0.00 0.00 4.57
274 275 1.661509 GCAGACGCCCAAAAAGCAC 60.662 57.895 0.00 0.00 0.00 4.40
275 276 1.670949 TTGCAGACGCCCAAAAAGCA 61.671 50.000 0.00 0.00 37.32 3.91
276 277 0.529555 TTTGCAGACGCCCAAAAAGC 60.530 50.000 0.00 0.00 37.32 3.51
277 278 1.860326 CTTTTGCAGACGCCCAAAAAG 59.140 47.619 0.00 0.00 39.56 2.27
278 279 1.933247 CTTTTGCAGACGCCCAAAAA 58.067 45.000 0.00 0.00 39.56 1.94
279 280 0.529555 GCTTTTGCAGACGCCCAAAA 60.530 50.000 0.00 0.00 46.58 2.44
280 281 1.067250 GCTTTTGCAGACGCCCAAA 59.933 52.632 0.00 0.00 46.58 3.28
281 282 2.727544 GCTTTTGCAGACGCCCAA 59.272 55.556 0.00 0.00 46.58 4.12
291 292 0.388520 GGGACCAACATCGCTTTTGC 60.389 55.000 0.00 0.00 43.23 3.68
292 293 3.792716 GGGACCAACATCGCTTTTG 57.207 52.632 0.00 0.00 0.00 2.44
306 307 1.670083 ACTTTTAGTGCGCGGGGAC 60.670 57.895 16.47 16.47 34.21 4.46
307 308 1.669760 CACTTTTAGTGCGCGGGGA 60.670 57.895 8.83 0.00 39.62 4.81
308 309 2.867472 CACTTTTAGTGCGCGGGG 59.133 61.111 8.83 0.00 39.62 5.73
316 317 2.225727 GCGCCACTTTAGCACTTTTAGT 59.774 45.455 0.00 0.00 0.00 2.24
317 318 2.724839 CGCGCCACTTTAGCACTTTTAG 60.725 50.000 0.00 0.00 0.00 1.85
318 319 1.195900 CGCGCCACTTTAGCACTTTTA 59.804 47.619 0.00 0.00 0.00 1.52
319 320 0.040425 CGCGCCACTTTAGCACTTTT 60.040 50.000 0.00 0.00 0.00 2.27
320 321 1.574428 CGCGCCACTTTAGCACTTT 59.426 52.632 0.00 0.00 0.00 2.66
321 322 2.966309 GCGCGCCACTTTAGCACTT 61.966 57.895 23.24 0.00 0.00 3.16
322 323 2.501223 TAGCGCGCCACTTTAGCACT 62.501 55.000 30.33 6.92 0.00 4.40
323 324 1.429148 ATAGCGCGCCACTTTAGCAC 61.429 55.000 30.33 0.00 0.00 4.40
324 325 0.103390 TATAGCGCGCCACTTTAGCA 59.897 50.000 30.33 2.34 0.00 3.49
325 326 1.192534 CTTATAGCGCGCCACTTTAGC 59.807 52.381 30.33 0.00 0.00 3.09
326 327 2.470821 ACTTATAGCGCGCCACTTTAG 58.529 47.619 30.33 19.32 0.00 1.85
327 328 2.589798 ACTTATAGCGCGCCACTTTA 57.410 45.000 30.33 14.06 0.00 1.85
328 329 1.734163 AACTTATAGCGCGCCACTTT 58.266 45.000 30.33 11.88 0.00 2.66
329 330 1.734163 AAACTTATAGCGCGCCACTT 58.266 45.000 30.33 12.34 0.00 3.16
330 331 1.734163 AAAACTTATAGCGCGCCACT 58.266 45.000 30.33 15.40 0.00 4.00
331 332 3.872560 ATAAAACTTATAGCGCGCCAC 57.127 42.857 30.33 0.00 0.00 5.01
332 333 3.002862 CCAATAAAACTTATAGCGCGCCA 59.997 43.478 30.33 16.82 0.00 5.69
333 334 3.551551 CCAATAAAACTTATAGCGCGCC 58.448 45.455 30.33 10.31 0.00 6.53
334 335 3.002965 ACCCAATAAAACTTATAGCGCGC 59.997 43.478 26.66 26.66 0.00 6.86
335 336 4.523813 CACCCAATAAAACTTATAGCGCG 58.476 43.478 0.00 0.00 0.00 6.86
336 337 4.287720 GCACCCAATAAAACTTATAGCGC 58.712 43.478 0.00 0.00 0.00 5.92
337 338 4.336993 TGGCACCCAATAAAACTTATAGCG 59.663 41.667 0.00 0.00 0.00 4.26
338 339 5.845391 TGGCACCCAATAAAACTTATAGC 57.155 39.130 0.00 0.00 0.00 2.97
339 340 9.665719 AAATTTGGCACCCAATAAAACTTATAG 57.334 29.630 0.00 0.00 43.55 1.31
341 342 8.932434 AAAATTTGGCACCCAATAAAACTTAT 57.068 26.923 0.00 0.00 43.55 1.73
342 343 8.624776 CAAAAATTTGGCACCCAATAAAACTTA 58.375 29.630 0.00 0.00 43.55 2.24
343 344 7.123397 ACAAAAATTTGGCACCCAATAAAACTT 59.877 29.630 10.38 0.00 43.55 2.66
344 345 6.605194 ACAAAAATTTGGCACCCAATAAAACT 59.395 30.769 10.38 0.00 43.55 2.66
345 346 6.694844 CACAAAAATTTGGCACCCAATAAAAC 59.305 34.615 10.38 0.00 43.55 2.43
346 347 6.681368 GCACAAAAATTTGGCACCCAATAAAA 60.681 34.615 10.38 0.00 43.55 1.52
347 348 5.221126 GCACAAAAATTTGGCACCCAATAAA 60.221 36.000 10.38 0.00 43.55 1.40
348 349 4.276926 GCACAAAAATTTGGCACCCAATAA 59.723 37.500 10.38 0.00 43.55 1.40
349 350 3.817647 GCACAAAAATTTGGCACCCAATA 59.182 39.130 10.38 0.00 43.55 1.90
350 351 2.622470 GCACAAAAATTTGGCACCCAAT 59.378 40.909 10.38 0.00 43.55 3.16
351 352 2.019984 GCACAAAAATTTGGCACCCAA 58.980 42.857 10.38 0.00 42.29 4.12
352 353 1.673168 GCACAAAAATTTGGCACCCA 58.327 45.000 10.38 0.00 42.34 4.51
353 354 0.585838 CGCACAAAAATTTGGCACCC 59.414 50.000 10.38 0.00 42.34 4.61
354 355 0.585838 CCGCACAAAAATTTGGCACC 59.414 50.000 10.38 0.00 42.34 5.01
355 356 0.041400 GCCGCACAAAAATTTGGCAC 60.041 50.000 10.38 3.37 42.34 5.01
356 357 1.162800 GGCCGCACAAAAATTTGGCA 61.163 50.000 14.73 0.00 42.34 4.92
357 358 1.573932 GGCCGCACAAAAATTTGGC 59.426 52.632 10.38 6.44 42.34 4.52
358 359 0.878086 ACGGCCGCACAAAAATTTGG 60.878 50.000 28.58 0.00 42.34 3.28
359 360 0.933796 AACGGCCGCACAAAAATTTG 59.066 45.000 28.58 4.40 43.62 2.32
360 361 0.933796 CAACGGCCGCACAAAAATTT 59.066 45.000 28.58 5.37 0.00 1.82
361 362 1.494766 GCAACGGCCGCACAAAAATT 61.495 50.000 28.58 6.25 0.00 1.82
362 363 1.953642 GCAACGGCCGCACAAAAAT 60.954 52.632 28.58 0.00 0.00 1.82
363 364 2.583593 GCAACGGCCGCACAAAAA 60.584 55.556 28.58 0.00 0.00 1.94
364 365 3.764810 CTGCAACGGCCGCACAAAA 62.765 57.895 28.58 5.26 40.13 2.44
365 366 4.263209 CTGCAACGGCCGCACAAA 62.263 61.111 28.58 6.50 40.13 2.83
368 369 4.465512 CATCTGCAACGGCCGCAC 62.466 66.667 28.58 15.87 40.13 5.34
371 372 3.869272 GAGCATCTGCAACGGCCG 61.869 66.667 26.86 26.86 45.16 6.13
382 383 3.585862 TCGGTCACACTTTAAGAGCATC 58.414 45.455 0.00 0.00 0.00 3.91
383 384 3.006967 ACTCGGTCACACTTTAAGAGCAT 59.993 43.478 0.00 0.00 0.00 3.79
384 385 2.364324 ACTCGGTCACACTTTAAGAGCA 59.636 45.455 0.00 0.00 0.00 4.26
385 386 3.027974 ACTCGGTCACACTTTAAGAGC 57.972 47.619 0.00 0.00 0.00 4.09
386 387 4.318831 GCAAACTCGGTCACACTTTAAGAG 60.319 45.833 0.00 0.00 0.00 2.85
387 388 3.558418 GCAAACTCGGTCACACTTTAAGA 59.442 43.478 0.00 0.00 0.00 2.10
388 389 3.603857 CGCAAACTCGGTCACACTTTAAG 60.604 47.826 0.00 0.00 0.00 1.85
389 390 2.285756 CGCAAACTCGGTCACACTTTAA 59.714 45.455 0.00 0.00 0.00 1.52
390 391 1.862201 CGCAAACTCGGTCACACTTTA 59.138 47.619 0.00 0.00 0.00 1.85
391 392 0.655733 CGCAAACTCGGTCACACTTT 59.344 50.000 0.00 0.00 0.00 2.66
392 393 1.772063 GCGCAAACTCGGTCACACTT 61.772 55.000 0.30 0.00 0.00 3.16
393 394 2.244651 GCGCAAACTCGGTCACACT 61.245 57.895 0.30 0.00 0.00 3.55
394 395 2.042520 TTGCGCAAACTCGGTCACAC 62.043 55.000 22.78 0.00 0.00 3.82
395 396 1.369839 TTTGCGCAAACTCGGTCACA 61.370 50.000 30.63 5.54 0.00 3.58
396 397 0.248296 TTTTGCGCAAACTCGGTCAC 60.248 50.000 33.73 0.00 0.00 3.67
397 398 0.452184 TTTTTGCGCAAACTCGGTCA 59.548 45.000 33.73 15.73 0.00 4.02
398 399 1.766069 ATTTTTGCGCAAACTCGGTC 58.234 45.000 33.73 0.00 0.00 4.79
399 400 3.241701 CATATTTTTGCGCAAACTCGGT 58.758 40.909 33.73 19.28 0.00 4.69
400 401 3.241701 ACATATTTTTGCGCAAACTCGG 58.758 40.909 33.73 22.82 0.00 4.63
401 402 3.911365 TGACATATTTTTGCGCAAACTCG 59.089 39.130 33.73 21.48 0.00 4.18
402 403 5.164061 CCTTGACATATTTTTGCGCAAACTC 60.164 40.000 33.73 19.75 0.00 3.01
403 404 4.685628 CCTTGACATATTTTTGCGCAAACT 59.314 37.500 33.73 24.86 0.00 2.66
404 405 4.666402 GCCTTGACATATTTTTGCGCAAAC 60.666 41.667 33.73 20.60 0.00 2.93
405 406 3.431572 GCCTTGACATATTTTTGCGCAAA 59.568 39.130 30.63 30.63 0.00 3.68
406 407 2.992543 GCCTTGACATATTTTTGCGCAA 59.007 40.909 21.02 21.02 0.00 4.85
407 408 2.230992 AGCCTTGACATATTTTTGCGCA 59.769 40.909 5.66 5.66 0.00 6.09
408 409 2.879826 AGCCTTGACATATTTTTGCGC 58.120 42.857 0.00 0.00 0.00 6.09
409 410 4.090354 CACAAGCCTTGACATATTTTTGCG 59.910 41.667 12.25 0.00 0.00 4.85
410 411 5.229423 TCACAAGCCTTGACATATTTTTGC 58.771 37.500 12.25 0.00 0.00 3.68
411 412 7.712264 TTTCACAAGCCTTGACATATTTTTG 57.288 32.000 12.25 0.00 0.00 2.44
412 413 7.768120 TGTTTTCACAAGCCTTGACATATTTTT 59.232 29.630 12.25 0.00 0.00 1.94
413 414 7.271511 TGTTTTCACAAGCCTTGACATATTTT 58.728 30.769 12.25 0.00 0.00 1.82
414 415 6.815089 TGTTTTCACAAGCCTTGACATATTT 58.185 32.000 12.25 0.00 0.00 1.40
415 416 6.403866 TGTTTTCACAAGCCTTGACATATT 57.596 33.333 12.25 0.00 0.00 1.28
416 417 6.403866 TTGTTTTCACAAGCCTTGACATAT 57.596 33.333 12.25 0.00 38.03 1.78
417 418 5.843673 TTGTTTTCACAAGCCTTGACATA 57.156 34.783 12.25 0.00 38.03 2.29
418 419 4.734398 TTGTTTTCACAAGCCTTGACAT 57.266 36.364 12.25 0.00 38.03 3.06
419 420 4.527509 TTTGTTTTCACAAGCCTTGACA 57.472 36.364 12.25 1.40 43.92 3.58
420 421 5.691754 CCTATTTGTTTTCACAAGCCTTGAC 59.308 40.000 12.25 0.00 43.92 3.18
421 422 5.362430 ACCTATTTGTTTTCACAAGCCTTGA 59.638 36.000 12.25 0.00 43.92 3.02
422 423 5.600696 ACCTATTTGTTTTCACAAGCCTTG 58.399 37.500 2.11 2.11 43.92 3.61
423 424 5.869649 ACCTATTTGTTTTCACAAGCCTT 57.130 34.783 0.00 0.00 43.92 4.35
424 425 8.823220 ATATACCTATTTGTTTTCACAAGCCT 57.177 30.769 0.00 0.00 43.92 4.58
460 461 9.617975 GCCATCAAATTAGTAGCATTAGATTTC 57.382 33.333 0.00 0.00 0.00 2.17
461 462 9.135189 TGCCATCAAATTAGTAGCATTAGATTT 57.865 29.630 0.00 0.00 0.00 2.17
462 463 8.696043 TGCCATCAAATTAGTAGCATTAGATT 57.304 30.769 0.00 0.00 0.00 2.40
463 464 8.874744 ATGCCATCAAATTAGTAGCATTAGAT 57.125 30.769 0.00 0.00 36.10 1.98
464 465 9.440773 CTATGCCATCAAATTAGTAGCATTAGA 57.559 33.333 0.00 0.00 39.89 2.10
465 466 9.440773 TCTATGCCATCAAATTAGTAGCATTAG 57.559 33.333 0.00 0.00 39.89 1.73
466 467 9.964354 ATCTATGCCATCAAATTAGTAGCATTA 57.036 29.630 0.00 0.00 39.89 1.90
467 468 8.737175 CATCTATGCCATCAAATTAGTAGCATT 58.263 33.333 0.00 0.00 39.89 3.56
468 469 7.886970 ACATCTATGCCATCAAATTAGTAGCAT 59.113 33.333 0.00 0.00 41.89 3.79
469 470 7.226441 ACATCTATGCCATCAAATTAGTAGCA 58.774 34.615 0.00 0.00 0.00 3.49
470 471 7.678947 ACATCTATGCCATCAAATTAGTAGC 57.321 36.000 0.00 0.00 0.00 3.58
471 472 8.509690 CCAACATCTATGCCATCAAATTAGTAG 58.490 37.037 0.00 0.00 0.00 2.57
472 473 7.998383 ACCAACATCTATGCCATCAAATTAGTA 59.002 33.333 0.00 0.00 0.00 1.82
473 474 6.835488 ACCAACATCTATGCCATCAAATTAGT 59.165 34.615 0.00 0.00 0.00 2.24
474 475 7.230108 AGACCAACATCTATGCCATCAAATTAG 59.770 37.037 0.00 0.00 0.00 1.73
475 476 7.062322 AGACCAACATCTATGCCATCAAATTA 58.938 34.615 0.00 0.00 0.00 1.40
476 477 5.895534 AGACCAACATCTATGCCATCAAATT 59.104 36.000 0.00 0.00 0.00 1.82
477 478 5.452255 AGACCAACATCTATGCCATCAAAT 58.548 37.500 0.00 0.00 0.00 2.32
478 479 4.858850 AGACCAACATCTATGCCATCAAA 58.141 39.130 0.00 0.00 0.00 2.69
479 480 4.508551 AGACCAACATCTATGCCATCAA 57.491 40.909 0.00 0.00 0.00 2.57
480 481 5.830799 ATAGACCAACATCTATGCCATCA 57.169 39.130 0.00 0.00 39.87 3.07
481 482 8.671921 CAATAATAGACCAACATCTATGCCATC 58.328 37.037 0.00 0.00 40.36 3.51
482 483 8.166061 ACAATAATAGACCAACATCTATGCCAT 58.834 33.333 0.00 0.00 40.36 4.40
483 484 7.517320 ACAATAATAGACCAACATCTATGCCA 58.483 34.615 0.00 0.00 40.36 4.92
484 485 7.986085 ACAATAATAGACCAACATCTATGCC 57.014 36.000 0.00 0.00 40.36 4.40
531 532 7.595604 TCGAACTTTGTTGGAAAGTTAAACTT 58.404 30.769 11.49 0.00 46.81 2.66
532 533 7.148355 TCGAACTTTGTTGGAAAGTTAAACT 57.852 32.000 11.49 0.00 46.81 2.66
533 534 7.539710 ACTTCGAACTTTGTTGGAAAGTTAAAC 59.460 33.333 11.49 1.35 46.81 2.01
534 535 7.595604 ACTTCGAACTTTGTTGGAAAGTTAAA 58.404 30.769 11.49 8.85 46.81 1.52
535 536 7.148355 ACTTCGAACTTTGTTGGAAAGTTAA 57.852 32.000 11.49 4.49 46.81 2.01
536 537 6.746745 ACTTCGAACTTTGTTGGAAAGTTA 57.253 33.333 11.49 0.00 46.81 2.24
538 539 5.644636 TGTACTTCGAACTTTGTTGGAAAGT 59.355 36.000 0.00 10.26 41.82 2.66
539 540 5.963586 GTGTACTTCGAACTTTGTTGGAAAG 59.036 40.000 0.00 0.00 0.00 2.62
540 541 5.163733 GGTGTACTTCGAACTTTGTTGGAAA 60.164 40.000 0.00 0.00 0.00 3.13
541 542 4.333372 GGTGTACTTCGAACTTTGTTGGAA 59.667 41.667 0.00 7.45 0.00 3.53
542 543 3.872771 GGTGTACTTCGAACTTTGTTGGA 59.127 43.478 0.00 0.00 0.00 3.53
543 544 3.002965 GGGTGTACTTCGAACTTTGTTGG 59.997 47.826 0.00 0.00 0.00 3.77
544 545 3.875134 AGGGTGTACTTCGAACTTTGTTG 59.125 43.478 0.00 0.00 0.00 3.33
545 546 4.146745 AGGGTGTACTTCGAACTTTGTT 57.853 40.909 0.00 0.00 0.00 2.83
546 547 3.832615 AGGGTGTACTTCGAACTTTGT 57.167 42.857 0.00 0.00 0.00 2.83
547 548 4.573201 TGAAAGGGTGTACTTCGAACTTTG 59.427 41.667 11.10 0.00 0.00 2.77
548 549 4.773013 TGAAAGGGTGTACTTCGAACTTT 58.227 39.130 7.22 7.22 0.00 2.66
549 550 4.411256 TGAAAGGGTGTACTTCGAACTT 57.589 40.909 0.00 0.00 0.00 2.66
550 551 4.377897 CTTGAAAGGGTGTACTTCGAACT 58.622 43.478 0.00 0.00 0.00 3.01
551 552 3.497262 CCTTGAAAGGGTGTACTTCGAAC 59.503 47.826 0.76 0.00 42.66 3.95
552 553 3.388676 TCCTTGAAAGGGTGTACTTCGAA 59.611 43.478 9.21 0.00 46.47 3.71
553 554 2.967201 TCCTTGAAAGGGTGTACTTCGA 59.033 45.455 9.21 0.00 46.47 3.71
554 555 3.064931 GTCCTTGAAAGGGTGTACTTCG 58.935 50.000 9.21 0.00 46.47 3.79
555 556 4.065789 CTGTCCTTGAAAGGGTGTACTTC 58.934 47.826 9.21 0.00 46.47 3.01
556 557 3.181443 CCTGTCCTTGAAAGGGTGTACTT 60.181 47.826 9.21 0.00 46.47 2.24
557 558 2.372172 CCTGTCCTTGAAAGGGTGTACT 59.628 50.000 9.21 0.00 46.47 2.73
558 559 2.779506 CCTGTCCTTGAAAGGGTGTAC 58.220 52.381 9.21 1.02 46.47 2.90
565 566 4.301072 TGTATTCCCCTGTCCTTGAAAG 57.699 45.455 0.00 0.00 0.00 2.62
566 567 4.733077 TTGTATTCCCCTGTCCTTGAAA 57.267 40.909 0.00 0.00 0.00 2.69
567 568 4.625324 CGATTGTATTCCCCTGTCCTTGAA 60.625 45.833 0.00 0.00 0.00 2.69
568 569 3.118408 CGATTGTATTCCCCTGTCCTTGA 60.118 47.826 0.00 0.00 0.00 3.02
569 570 3.118408 TCGATTGTATTCCCCTGTCCTTG 60.118 47.826 0.00 0.00 0.00 3.61
570 571 3.112263 TCGATTGTATTCCCCTGTCCTT 58.888 45.455 0.00 0.00 0.00 3.36
571 572 2.759355 TCGATTGTATTCCCCTGTCCT 58.241 47.619 0.00 0.00 0.00 3.85
572 573 3.467803 CTTCGATTGTATTCCCCTGTCC 58.532 50.000 0.00 0.00 0.00 4.02
573 574 3.118371 ACCTTCGATTGTATTCCCCTGTC 60.118 47.826 0.00 0.00 0.00 3.51
574 575 2.844348 ACCTTCGATTGTATTCCCCTGT 59.156 45.455 0.00 0.00 0.00 4.00
575 576 3.560636 ACCTTCGATTGTATTCCCCTG 57.439 47.619 0.00 0.00 0.00 4.45
576 577 4.553678 TCTACCTTCGATTGTATTCCCCT 58.446 43.478 0.00 0.00 0.00 4.79
577 578 4.950205 TCTACCTTCGATTGTATTCCCC 57.050 45.455 0.00 0.00 0.00 4.81
578 579 6.158023 TCTTCTACCTTCGATTGTATTCCC 57.842 41.667 0.00 0.00 0.00 3.97
579 580 6.201234 GCTTCTTCTACCTTCGATTGTATTCC 59.799 42.308 0.00 0.00 0.00 3.01
580 581 6.981559 AGCTTCTTCTACCTTCGATTGTATTC 59.018 38.462 0.00 0.00 0.00 1.75
581 582 6.879400 AGCTTCTTCTACCTTCGATTGTATT 58.121 36.000 0.00 0.00 0.00 1.89
582 583 6.472686 AGCTTCTTCTACCTTCGATTGTAT 57.527 37.500 0.00 0.00 0.00 2.29
631 632 7.121463 TGGACACAACACAACAACTAGTAAAAT 59.879 33.333 0.00 0.00 0.00 1.82
645 646 6.605471 AGATAGATAACTGGACACAACACA 57.395 37.500 0.00 0.00 0.00 3.72
730 732 8.149647 TGAACTTAGAACAACGGGTAAAGAATA 58.850 33.333 0.00 0.00 0.00 1.75
731 733 6.993902 TGAACTTAGAACAACGGGTAAAGAAT 59.006 34.615 0.00 0.00 0.00 2.40
734 736 5.756833 ACTGAACTTAGAACAACGGGTAAAG 59.243 40.000 0.00 0.00 0.00 1.85
737 739 4.942761 ACTGAACTTAGAACAACGGGTA 57.057 40.909 0.00 0.00 0.00 3.69
738 740 3.832615 ACTGAACTTAGAACAACGGGT 57.167 42.857 0.00 0.00 0.00 5.28
739 741 3.875134 ACAACTGAACTTAGAACAACGGG 59.125 43.478 0.00 0.00 0.00 5.28
740 742 4.809426 AGACAACTGAACTTAGAACAACGG 59.191 41.667 0.00 0.00 0.00 4.44
741 743 5.749109 AGAGACAACTGAACTTAGAACAACG 59.251 40.000 0.00 0.00 0.00 4.10
751 753 7.364232 CCAGTATAATGGAGAGACAACTGAACT 60.364 40.741 14.10 0.00 43.57 3.01
752 754 6.758886 CCAGTATAATGGAGAGACAACTGAAC 59.241 42.308 14.10 0.00 43.57 3.18
754 756 5.163405 GCCAGTATAATGGAGAGACAACTGA 60.163 44.000 23.05 0.00 43.57 3.41
755 757 5.053145 GCCAGTATAATGGAGAGACAACTG 58.947 45.833 23.05 0.00 43.57 3.16
757 759 5.023533 TGCCAGTATAATGGAGAGACAAC 57.976 43.478 23.05 3.04 43.57 3.32
760 762 5.474578 TGATGCCAGTATAATGGAGAGAC 57.525 43.478 23.05 5.19 43.57 3.36
764 766 6.713903 ACATCTTTGATGCCAGTATAATGGAG 59.286 38.462 23.05 9.86 43.57 3.86
766 768 6.072286 GGACATCTTTGATGCCAGTATAATGG 60.072 42.308 14.95 14.95 43.72 3.16
771 773 4.508551 TGGACATCTTTGATGCCAGTAT 57.491 40.909 14.79 0.00 0.00 2.12
779 781 4.104383 ACACACCTTGGACATCTTTGAT 57.896 40.909 0.00 0.00 0.00 2.57
781 783 3.631686 TGAACACACCTTGGACATCTTTG 59.368 43.478 0.00 0.00 0.00 2.77
782 784 3.897239 TGAACACACCTTGGACATCTTT 58.103 40.909 0.00 0.00 0.00 2.52
783 785 3.576078 TGAACACACCTTGGACATCTT 57.424 42.857 0.00 0.00 0.00 2.40
784 786 3.795688 ATGAACACACCTTGGACATCT 57.204 42.857 0.00 0.00 0.00 2.90
785 787 4.853924 AAATGAACACACCTTGGACATC 57.146 40.909 0.00 0.00 0.00 3.06
786 788 6.723298 TTTAAATGAACACACCTTGGACAT 57.277 33.333 0.00 0.00 0.00 3.06
810 812 9.643693 ACATCAAAAAGCATCTTCGATTAATTT 57.356 25.926 0.00 0.00 0.00 1.82
812 814 9.643693 AAACATCAAAAAGCATCTTCGATTAAT 57.356 25.926 0.00 0.00 0.00 1.40
813 815 9.474920 AAAACATCAAAAAGCATCTTCGATTAA 57.525 25.926 0.00 0.00 0.00 1.40
890 908 1.411246 AGTATCTTATCACCCGCGCAA 59.589 47.619 8.75 0.00 0.00 4.85
909 927 6.541278 TGATGGAGCTGTCAGATTCATTTTAG 59.459 38.462 13.13 0.00 0.00 1.85
911 929 5.125097 GTGATGGAGCTGTCAGATTCATTTT 59.875 40.000 13.13 0.00 0.00 1.82
1005 1027 1.981951 TTGGATGGGAGCGCTGCATA 61.982 55.000 30.47 18.74 0.00 3.14
1058 1092 4.201666 CGATCTTGCTTCAGTTTAGTCTGC 60.202 45.833 0.00 0.00 35.63 4.26
1787 7173 0.314302 GTATCTACACGCTGGCCGAT 59.686 55.000 0.00 0.00 41.02 4.18
1908 7303 1.531840 AGCGAGGAGATGGCGGTAT 60.532 57.895 0.00 0.00 37.77 2.73
1909 7304 2.123854 AGCGAGGAGATGGCGGTA 60.124 61.111 0.00 0.00 37.77 4.02
2059 7465 2.817834 GCGTGCTCCACCGCATTA 60.818 61.111 0.00 0.00 42.62 1.90
2483 7929 7.308435 AGAAAGCGGCATAATTATTAATCAGC 58.692 34.615 1.45 0.00 0.00 4.26
2497 7943 7.011482 CAGAGTACTTAATTAAGAAAGCGGCAT 59.989 37.037 27.92 8.04 37.08 4.40
2514 7960 4.865365 GCGTCTTATTCAAGCAGAGTACTT 59.135 41.667 0.00 0.00 0.00 2.24
2515 7961 4.425520 GCGTCTTATTCAAGCAGAGTACT 58.574 43.478 0.00 0.00 0.00 2.73
2516 7962 3.552294 GGCGTCTTATTCAAGCAGAGTAC 59.448 47.826 0.00 0.00 0.00 2.73
2517 7963 3.447586 AGGCGTCTTATTCAAGCAGAGTA 59.552 43.478 0.00 0.00 0.00 2.59
2533 7979 3.173240 GACGAGCGACAAGGCGTC 61.173 66.667 0.00 0.00 44.83 5.19
2605 8055 3.325293 TTTGCAAAGACAAGCCAAACA 57.675 38.095 8.05 0.00 0.00 2.83
2606 8056 4.676849 TTTTTGCAAAGACAAGCCAAAC 57.323 36.364 12.41 0.00 0.00 2.93
2608 8058 8.668510 TTATTATTTTTGCAAAGACAAGCCAA 57.331 26.923 12.41 1.52 0.00 4.52
2610 8060 8.177013 CCATTATTATTTTTGCAAAGACAAGCC 58.823 33.333 12.41 0.00 0.00 4.35
2611 8061 8.177013 CCCATTATTATTTTTGCAAAGACAAGC 58.823 33.333 12.41 0.00 0.00 4.01
2612 8062 9.434420 TCCCATTATTATTTTTGCAAAGACAAG 57.566 29.630 12.41 0.00 0.00 3.16
2613 8063 9.784531 TTCCCATTATTATTTTTGCAAAGACAA 57.215 25.926 12.41 3.71 0.00 3.18
2614 8064 9.784531 TTTCCCATTATTATTTTTGCAAAGACA 57.215 25.926 12.41 0.00 0.00 3.41
2650 8100 8.914011 AGCTTTGACCTATAAACTCAAGTTTTT 58.086 29.630 12.95 8.33 45.07 1.94
2654 8104 9.740710 ATTTAGCTTTGACCTATAAACTCAAGT 57.259 29.630 0.00 0.00 0.00 3.16
2660 8110 9.569167 GGTTTGATTTAGCTTTGACCTATAAAC 57.431 33.333 0.00 0.00 0.00 2.01
2670 8120 6.587608 GGAGTTCATGGTTTGATTTAGCTTTG 59.412 38.462 0.00 0.00 33.34 2.77
2687 8137 3.611025 TTTCAGGGTTTGGGAGTTCAT 57.389 42.857 0.00 0.00 0.00 2.57
2699 8149 2.885135 TGATGTGCTGATTTCAGGGT 57.115 45.000 9.49 0.00 43.94 4.34
2721 8171 9.901172 GGTTTAAAATAGACCAGGATTAGAGAA 57.099 33.333 0.00 0.00 33.61 2.87
2748 8198 8.328864 CAGCGAATACCAACTAAATTCTCTTAC 58.671 37.037 0.00 0.00 0.00 2.34
2750 8200 7.103641 TCAGCGAATACCAACTAAATTCTCTT 58.896 34.615 0.00 0.00 0.00 2.85
2755 8205 7.257722 CCAATTCAGCGAATACCAACTAAATT 58.742 34.615 4.60 0.00 31.46 1.82
3011 8561 6.147985 TGTCTGCGCTAAAAATGTACATTACA 59.852 34.615 21.07 13.96 43.80 2.41
3012 8562 6.539324 TGTCTGCGCTAAAAATGTACATTAC 58.461 36.000 21.07 11.71 0.00 1.89
3013 8563 6.729391 TGTCTGCGCTAAAAATGTACATTA 57.271 33.333 21.07 5.50 0.00 1.90
3438 9062 9.071221 GCATAAACAATTTTCGTGTGATTCATA 57.929 29.630 0.00 0.00 0.00 2.15
3439 9063 7.814107 AGCATAAACAATTTTCGTGTGATTCAT 59.186 29.630 0.00 0.00 0.00 2.57
3440 9064 7.144661 AGCATAAACAATTTTCGTGTGATTCA 58.855 30.769 0.00 0.00 0.00 2.57
3441 9065 7.566858 AGCATAAACAATTTTCGTGTGATTC 57.433 32.000 0.00 0.00 0.00 2.52
3442 9066 7.945033 AAGCATAAACAATTTTCGTGTGATT 57.055 28.000 0.00 0.00 0.00 2.57
3443 9067 8.511321 TCTAAGCATAAACAATTTTCGTGTGAT 58.489 29.630 0.00 0.00 0.00 3.06
3444 9068 7.866729 TCTAAGCATAAACAATTTTCGTGTGA 58.133 30.769 0.00 0.00 0.00 3.58
3445 9069 8.500837 TTCTAAGCATAAACAATTTTCGTGTG 57.499 30.769 0.00 0.00 0.00 3.82
3456 9080 9.364989 GGCAAACAAATATTCTAAGCATAAACA 57.635 29.630 0.00 0.00 0.00 2.83
3457 9081 9.364989 TGGCAAACAAATATTCTAAGCATAAAC 57.635 29.630 0.00 0.00 0.00 2.01
3458 9082 9.364989 GTGGCAAACAAATATTCTAAGCATAAA 57.635 29.630 0.00 0.00 0.00 1.40
3459 9083 8.748412 AGTGGCAAACAAATATTCTAAGCATAA 58.252 29.630 0.00 0.00 0.00 1.90
3460 9084 8.292444 AGTGGCAAACAAATATTCTAAGCATA 57.708 30.769 0.00 0.00 0.00 3.14
3461 9085 7.174107 AGTGGCAAACAAATATTCTAAGCAT 57.826 32.000 0.00 0.00 0.00 3.79
3462 9086 6.588719 AGTGGCAAACAAATATTCTAAGCA 57.411 33.333 0.00 0.00 0.00 3.91
3463 9087 8.980143 TTTAGTGGCAAACAAATATTCTAAGC 57.020 30.769 0.00 0.00 0.00 3.09
3487 9111 9.838975 GAAGTGTTGAAATTTGGAAATGTTTTT 57.161 25.926 0.00 0.00 0.00 1.94
3488 9112 9.007901 TGAAGTGTTGAAATTTGGAAATGTTTT 57.992 25.926 0.00 0.00 0.00 2.43
3489 9113 8.558973 TGAAGTGTTGAAATTTGGAAATGTTT 57.441 26.923 0.00 0.00 0.00 2.83
3490 9114 7.823799 ACTGAAGTGTTGAAATTTGGAAATGTT 59.176 29.630 0.00 0.00 0.00 2.71
3491 9115 7.278424 CACTGAAGTGTTGAAATTTGGAAATGT 59.722 33.333 0.00 0.00 40.96 2.71
3492 9116 7.623770 CACTGAAGTGTTGAAATTTGGAAATG 58.376 34.615 0.00 0.00 40.96 2.32
3493 9117 7.775397 CACTGAAGTGTTGAAATTTGGAAAT 57.225 32.000 0.00 0.00 40.96 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.