Multiple sequence alignment - TraesCS2A01G467300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G467300 chr2A 100.000 6047 0 0 1 6047 711642134 711636088 0.000000e+00 11167.0
1 TraesCS2A01G467300 chr2B 92.780 5734 223 66 1 5614 687474414 687468752 0.000000e+00 8118.0
2 TraesCS2A01G467300 chr2D 94.853 4935 152 38 709 5583 572364987 572360095 0.000000e+00 7613.0
3 TraesCS2A01G467300 chr2D 81.092 238 25 12 1 230 572365722 572365497 8.060000e-39 172.0
4 TraesCS2A01G467300 chr4A 81.704 399 53 10 3358 3746 504868332 504868720 1.270000e-81 315.0
5 TraesCS2A01G467300 chr3B 87.845 181 15 2 3437 3612 736050586 736050764 7.940000e-49 206.0
6 TraesCS2A01G467300 chr3B 87.845 181 15 2 3437 3612 736073604 736073782 7.940000e-49 206.0
7 TraesCS2A01G467300 chr3B 87.845 181 15 2 3437 3612 736106602 736106780 7.940000e-49 206.0
8 TraesCS2A01G467300 chr3B 87.845 181 15 2 3437 3612 736143127 736143305 7.940000e-49 206.0
9 TraesCS2A01G467300 chr3B 86.740 181 17 2 3437 3612 736015742 736015920 1.720000e-45 195.0
10 TraesCS2A01G467300 chr1B 87.571 177 14 4 3441 3612 656254417 656254590 1.330000e-46 198.0
11 TraesCS2A01G467300 chr7A 87.778 90 9 1 4087 4174 276211828 276211739 2.980000e-18 104.0
12 TraesCS2A01G467300 chr7A 88.235 85 9 1 4089 4172 575284833 575284917 3.860000e-17 100.0
13 TraesCS2A01G467300 chr7B 85.882 85 11 1 4089 4172 235463253 235463169 8.350000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G467300 chr2A 711636088 711642134 6046 True 11167.0 11167 100.0000 1 6047 1 chr2A.!!$R1 6046
1 TraesCS2A01G467300 chr2B 687468752 687474414 5662 True 8118.0 8118 92.7800 1 5614 1 chr2B.!!$R1 5613
2 TraesCS2A01G467300 chr2D 572360095 572365722 5627 True 3892.5 7613 87.9725 1 5583 2 chr2D.!!$R1 5582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
312 339 0.107945 ACTCTCAGAAATCCAGCGCC 60.108 55.000 2.29 0.00 0.00 6.53 F
1204 1372 0.707616 TTATGGTTGTTGGGAGGGGG 59.292 55.000 0.00 0.00 0.00 5.40 F
1259 1427 1.737735 GCTGCAATTGCCGTTTCCC 60.738 57.895 26.94 4.43 41.18 3.97 F
1275 1443 2.427245 CCCTGGACGGTGCTAGGAG 61.427 68.421 15.84 0.00 38.70 3.69 F
2912 3139 0.811616 CCCACACGCCTTCTGCTATC 60.812 60.000 0.00 0.00 38.05 2.08 F
4372 4610 0.811616 CGGAATGGAAGGAGGAAGCG 60.812 60.000 0.00 0.00 0.00 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1259 1427 0.970937 TTCCTCCTAGCACCGTCCAG 60.971 60.000 0.0 0.0 0.0 3.86 R
2500 2724 1.202758 TGCTGTGGGGTTACTGAGTTG 60.203 52.381 0.0 0.0 0.0 3.16 R
2912 3139 1.336424 GCAAACCCACCACCAATAACG 60.336 52.381 0.0 0.0 0.0 3.18 R
3066 3293 6.126652 ACCTGGAAAGATCACAATAGCATAGT 60.127 38.462 0.0 0.0 0.0 2.12 R
4776 5014 0.688487 CCCCGTCAAAGGTGTAGGAA 59.312 55.000 0.0 0.0 0.0 3.36 R
5720 5963 0.031585 CGTGAGACAAGGACGGTGAA 59.968 55.000 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 85 2.820037 GCTTCCTTCCTTCCGGCG 60.820 66.667 0.00 0.00 0.00 6.46
125 133 2.224877 TGCACGTAACCCCCATCCA 61.225 57.895 0.00 0.00 0.00 3.41
128 136 1.081462 ACGTAACCCCCATCCAGGA 59.919 57.895 0.00 0.00 41.22 3.86
144 152 5.916661 TCCAGGAAACGAGCCTATATATC 57.083 43.478 0.00 0.00 33.51 1.63
180 190 1.672356 CGAAGGAGCCCAACACCAG 60.672 63.158 0.00 0.00 0.00 4.00
229 253 3.127533 CGAGCCCGAGCCCAAAAG 61.128 66.667 0.00 0.00 41.25 2.27
297 324 1.834263 CAAAATCCCCTCTCCGACTCT 59.166 52.381 0.00 0.00 0.00 3.24
312 339 0.107945 ACTCTCAGAAATCCAGCGCC 60.108 55.000 2.29 0.00 0.00 6.53
326 353 1.371758 GCGCCGCGATTCTGATCTA 60.372 57.895 18.91 0.00 0.00 1.98
329 356 1.667177 CGCCGCGATTCTGATCTACAT 60.667 52.381 8.23 0.00 0.00 2.29
331 358 2.917971 GCCGCGATTCTGATCTACATAC 59.082 50.000 8.23 0.00 0.00 2.39
332 359 3.611766 GCCGCGATTCTGATCTACATACA 60.612 47.826 8.23 0.00 0.00 2.29
333 360 4.162072 CCGCGATTCTGATCTACATACAG 58.838 47.826 8.23 0.00 0.00 2.74
334 361 4.083271 CCGCGATTCTGATCTACATACAGA 60.083 45.833 8.23 0.00 38.61 3.41
335 362 5.392487 CCGCGATTCTGATCTACATACAGAT 60.392 44.000 8.23 0.00 39.78 2.90
344 371 6.279513 GATCTACATACAGATCCCCTTGAG 57.720 45.833 2.33 0.00 43.46 3.02
345 372 3.898123 TCTACATACAGATCCCCTTGAGC 59.102 47.826 0.00 0.00 0.00 4.26
436 506 0.771755 ACTCTGTTTTGGGGGAGGAC 59.228 55.000 0.00 0.00 0.00 3.85
499 596 1.227674 ATCTCGCTCGATTTGGGGC 60.228 57.895 0.00 0.00 0.00 5.80
566 674 1.992277 ACCCAGATTGAGCGAGCCT 60.992 57.895 0.00 0.00 0.00 4.58
606 714 3.541713 GGAATCGCCGGAGCCTCT 61.542 66.667 5.05 0.00 34.57 3.69
608 716 3.507597 GAATCGCCGGAGCCTCTCC 62.508 68.421 5.05 2.83 46.44 3.71
628 736 2.334653 CGATCTGGAGGCTCGCTC 59.665 66.667 8.69 1.63 0.00 5.03
658 766 2.639751 CGGAGCGTTTTTCTCTTTGTG 58.360 47.619 0.00 0.00 0.00 3.33
664 772 3.065648 GCGTTTTTCTCTTTGTGTGGGTA 59.934 43.478 0.00 0.00 0.00 3.69
682 790 4.638421 TGGGTAATCGGAGCTGTTTAATTG 59.362 41.667 0.00 0.00 0.00 2.32
688 796 2.420022 CGGAGCTGTTTAATTGACCCTG 59.580 50.000 0.00 0.00 0.00 4.45
711 828 1.985473 TGTCTGATTTTGCAGTGCCT 58.015 45.000 13.72 0.00 37.20 4.75
712 829 1.610038 TGTCTGATTTTGCAGTGCCTG 59.390 47.619 13.72 0.71 37.20 4.85
713 830 1.881973 GTCTGATTTTGCAGTGCCTGA 59.118 47.619 13.72 3.27 37.20 3.86
715 832 2.156917 CTGATTTTGCAGTGCCTGAGA 58.843 47.619 13.72 0.00 32.44 3.27
716 833 1.881973 TGATTTTGCAGTGCCTGAGAC 59.118 47.619 13.72 0.65 32.44 3.36
717 834 0.877071 ATTTTGCAGTGCCTGAGACG 59.123 50.000 13.72 0.00 32.44 4.18
916 1063 4.842531 AAATCACCCCAATTCCAATTCC 57.157 40.909 0.00 0.00 0.00 3.01
917 1064 3.488355 ATCACCCCAATTCCAATTCCA 57.512 42.857 0.00 0.00 0.00 3.53
918 1065 3.266477 TCACCCCAATTCCAATTCCAA 57.734 42.857 0.00 0.00 0.00 3.53
919 1066 3.800924 TCACCCCAATTCCAATTCCAAT 58.199 40.909 0.00 0.00 0.00 3.16
920 1067 4.174383 TCACCCCAATTCCAATTCCAATT 58.826 39.130 0.00 0.00 0.00 2.32
921 1068 4.224818 TCACCCCAATTCCAATTCCAATTC 59.775 41.667 0.00 0.00 0.00 2.17
1022 1169 3.011119 TGGCGAACAACAACAGTAAGTT 58.989 40.909 0.00 0.00 42.42 2.66
1023 1170 3.440872 TGGCGAACAACAACAGTAAGTTT 59.559 39.130 0.00 0.00 38.74 2.66
1027 1174 5.451342 GCGAACAACAACAGTAAGTTTCTTC 59.549 40.000 0.00 0.00 38.74 2.87
1028 1175 5.671140 CGAACAACAACAGTAAGTTTCTTCG 59.329 40.000 10.74 10.74 38.74 3.79
1029 1176 6.454583 CGAACAACAACAGTAAGTTTCTTCGA 60.455 38.462 15.37 0.00 38.74 3.71
1037 1184 7.222000 ACAGTAAGTTTCTTCGATCTTCTCT 57.778 36.000 0.00 0.00 0.00 3.10
1044 1191 6.096141 AGTTTCTTCGATCTTCTCTGCAGATA 59.904 38.462 18.63 7.40 30.70 1.98
1048 1195 7.495901 TCTTCGATCTTCTCTGCAGATATTTT 58.504 34.615 18.63 2.42 30.70 1.82
1050 1197 7.048629 TCGATCTTCTCTGCAGATATTTTCT 57.951 36.000 18.63 0.00 30.70 2.52
1051 1198 7.495901 TCGATCTTCTCTGCAGATATTTTCTT 58.504 34.615 18.63 0.00 30.70 2.52
1052 1199 7.651304 TCGATCTTCTCTGCAGATATTTTCTTC 59.349 37.037 18.63 6.43 30.70 2.87
1067 1227 2.949451 TCTTCTTCTTCAGCTAGGCG 57.051 50.000 0.00 0.00 0.00 5.52
1094 1254 5.107414 GCTTTCAGAACCGTAGACTCTTTTC 60.107 44.000 0.00 0.00 0.00 2.29
1145 1305 1.984026 CCACCATTTGGGACCAGGC 60.984 63.158 0.96 0.00 42.54 4.85
1175 1335 4.272991 GCTTGATTTTGTCATGCCAAACAA 59.727 37.500 0.50 3.58 46.68 2.83
1204 1372 0.707616 TTATGGTTGTTGGGAGGGGG 59.292 55.000 0.00 0.00 0.00 5.40
1259 1427 1.737735 GCTGCAATTGCCGTTTCCC 60.738 57.895 26.94 4.43 41.18 3.97
1275 1443 2.427245 CCCTGGACGGTGCTAGGAG 61.427 68.421 15.84 0.00 38.70 3.69
1446 1615 2.743636 TAGCGCTGAAAGTTAGCTGT 57.256 45.000 22.90 0.00 40.33 4.40
1458 1627 4.408182 AGTTAGCTGTGAAGAGTGTGTT 57.592 40.909 0.00 0.00 0.00 3.32
1772 1974 4.579340 CAGCTTCATTCAACTCATATGCCT 59.421 41.667 0.00 0.00 0.00 4.75
1828 2030 8.749026 ATTGTCATCATAAGAGAAGATGCTTT 57.251 30.769 0.00 0.00 39.12 3.51
1830 2032 6.541278 TGTCATCATAAGAGAAGATGCTTTGG 59.459 38.462 0.00 0.00 39.12 3.28
1831 2033 6.541641 GTCATCATAAGAGAAGATGCTTTGGT 59.458 38.462 0.00 0.00 39.12 3.67
1832 2034 6.541278 TCATCATAAGAGAAGATGCTTTGGTG 59.459 38.462 0.00 0.00 39.12 4.17
1833 2035 6.053632 TCATAAGAGAAGATGCTTTGGTGA 57.946 37.500 0.00 0.00 0.00 4.02
1835 2037 7.114754 TCATAAGAGAAGATGCTTTGGTGATT 58.885 34.615 0.00 0.00 0.00 2.57
1836 2038 8.267183 TCATAAGAGAAGATGCTTTGGTGATTA 58.733 33.333 0.00 0.00 0.00 1.75
1837 2039 9.064706 CATAAGAGAAGATGCTTTGGTGATTAT 57.935 33.333 0.00 0.00 0.00 1.28
1838 2040 6.939132 AGAGAAGATGCTTTGGTGATTATG 57.061 37.500 0.00 0.00 0.00 1.90
2035 2248 3.693085 GACAGGCATCATGTCAAATCACT 59.307 43.478 6.72 0.00 45.18 3.41
2176 2392 4.716784 TCTGGAGCTACATACCAAGAACAT 59.283 41.667 0.00 0.00 33.14 2.71
2500 2724 8.902806 TGAAAACCATAAATCTCCACATACATC 58.097 33.333 0.00 0.00 0.00 3.06
2609 2833 9.396022 CCACCATAAGATATGTGAAAGTTTAGT 57.604 33.333 0.00 0.00 0.00 2.24
2676 2900 2.501723 GCCTTTCCTCTGGTAGATGTCA 59.498 50.000 0.00 0.00 0.00 3.58
2840 3064 9.700831 AGTATTCCACTCTAATTTTAAGGCAAT 57.299 29.630 0.00 0.00 28.33 3.56
2912 3139 0.811616 CCCACACGCCTTCTGCTATC 60.812 60.000 0.00 0.00 38.05 2.08
3056 3283 6.839124 TGCTCTTTGATCCATACAATTGTT 57.161 33.333 17.78 0.00 0.00 2.83
3066 3293 9.850198 TGATCCATACAATTGTTATCTCATCAA 57.150 29.630 17.78 0.00 0.00 2.57
3216 3445 1.123077 CTGGCTCCCTGCACTACATA 58.877 55.000 0.00 0.00 45.15 2.29
3217 3446 1.486310 CTGGCTCCCTGCACTACATAA 59.514 52.381 0.00 0.00 45.15 1.90
3329 3558 5.598005 TCATGGTGTTTGTGAAGAAAATCCT 59.402 36.000 0.00 0.00 0.00 3.24
3353 3582 1.936547 GCACCGATCATTGGAAGACTC 59.063 52.381 0.00 0.00 0.00 3.36
3398 3627 4.020662 AGTGGAGATGACTCTGTCCTTTTC 60.021 45.833 0.00 0.00 42.28 2.29
3780 4014 2.569853 TCGTACCATCAATCCCTGTGTT 59.430 45.455 0.00 0.00 0.00 3.32
3783 4017 3.814504 ACCATCAATCCCTGTGTTCTT 57.185 42.857 0.00 0.00 0.00 2.52
3784 4018 4.927267 ACCATCAATCCCTGTGTTCTTA 57.073 40.909 0.00 0.00 0.00 2.10
3951 4185 3.914435 AGTGTTGGGACCAGGTAGTATTT 59.086 43.478 0.00 0.00 0.00 1.40
3952 4186 4.007659 GTGTTGGGACCAGGTAGTATTTG 58.992 47.826 0.00 0.00 0.00 2.32
4021 4259 7.049799 TCATGACCATATTCTGTGTAATCGA 57.950 36.000 0.00 0.00 0.00 3.59
4141 4379 4.039730 GGTCACAGGTATGCATATCTCTGT 59.960 45.833 16.83 20.77 36.09 3.41
4372 4610 0.811616 CGGAATGGAAGGAGGAAGCG 60.812 60.000 0.00 0.00 0.00 4.68
4393 4631 4.618460 GCGATAAGAGAACTGTCAGTTGGA 60.618 45.833 22.83 3.87 38.80 3.53
4399 4637 2.294791 AGAACTGTCAGTTGGAGTCGAG 59.705 50.000 22.83 0.00 38.80 4.04
4585 4823 2.237143 TGAAAAGATGTCGGATGAGGCT 59.763 45.455 0.00 0.00 0.00 4.58
4721 4959 7.224297 TCTAACTATCATGTTGCCTAAATCCC 58.776 38.462 0.00 0.00 0.00 3.85
4740 4978 2.684881 CCCATTGCAGCTTAACTACCTG 59.315 50.000 0.00 0.00 0.00 4.00
4776 5014 0.597637 CAGACGAGAACACGCTTGGT 60.598 55.000 0.00 0.00 36.70 3.67
4797 5035 1.203162 TCCTACACCTTTGACGGGGTA 60.203 52.381 0.00 0.00 39.42 3.69
4836 5074 2.110006 GAGAAGCTCCGCATCCCC 59.890 66.667 0.00 0.00 0.00 4.81
5080 5318 7.093902 CGCCCCTAAACTATCTATCTATTGTCA 60.094 40.741 0.00 0.00 0.00 3.58
5083 5321 8.794553 CCCTAAACTATCTATCTATTGTCACGT 58.205 37.037 0.00 0.00 0.00 4.49
5090 5328 3.604875 ATCTATTGTCACGTCGGGTTT 57.395 42.857 0.00 0.00 0.00 3.27
5189 5427 2.524640 TGTGGCCGTGTGACCCTA 60.525 61.111 0.00 0.00 0.00 3.53
5218 5456 5.381757 TGCAGAATAAACTTACTGTTGGGT 58.618 37.500 0.00 0.00 39.13 4.51
5289 5528 1.483316 GTTTGTGTTTGGTAAGGCGC 58.517 50.000 0.00 0.00 0.00 6.53
5402 5641 6.716628 ACATTCTTAATATTGGCGATGATGGT 59.283 34.615 0.00 0.00 0.00 3.55
5412 5651 3.119137 TGGCGATGATGGTAGATTATCCG 60.119 47.826 0.00 0.00 0.00 4.18
5422 5661 6.288941 TGGTAGATTATCCGTGAAGTTTGA 57.711 37.500 0.00 0.00 0.00 2.69
5460 5699 7.647907 AACTCAAAATTGAATCTGATTGCAC 57.352 32.000 7.78 0.00 36.64 4.57
5465 5704 7.171848 TCAAAATTGAATCTGATTGCACCAAAG 59.828 33.333 7.78 0.00 33.55 2.77
5470 5709 1.820519 TCTGATTGCACCAAAGCCATC 59.179 47.619 0.00 0.00 37.23 3.51
5471 5710 0.527113 TGATTGCACCAAAGCCATCG 59.473 50.000 0.00 0.00 38.96 3.84
5519 5758 3.805891 GAGGGCATCTCCTCGCTGC 62.806 68.421 0.00 0.00 43.19 5.25
5532 5771 2.545532 CCTCGCTGCATTCAAACCAAAA 60.546 45.455 0.00 0.00 0.00 2.44
5539 5778 3.181471 TGCATTCAAACCAAAACGGACAT 60.181 39.130 0.00 0.00 38.63 3.06
5540 5779 3.184178 GCATTCAAACCAAAACGGACATG 59.816 43.478 0.00 0.00 38.63 3.21
5541 5780 3.444703 TTCAAACCAAAACGGACATGG 57.555 42.857 0.00 0.00 40.16 3.66
5574 5813 1.048601 ACATGTCCGGACTTGTCAGT 58.951 50.000 37.27 22.45 43.43 3.41
5617 5860 3.896648 GTCAGCGGACAATTTTTGAGA 57.103 42.857 12.41 0.00 43.73 3.27
5618 5861 4.223320 GTCAGCGGACAATTTTTGAGAA 57.777 40.909 12.41 0.00 43.73 2.87
5619 5862 4.222114 GTCAGCGGACAATTTTTGAGAAG 58.778 43.478 12.41 0.00 43.73 2.85
5620 5863 2.982470 CAGCGGACAATTTTTGAGAAGC 59.018 45.455 0.00 0.00 0.00 3.86
5621 5864 1.978782 GCGGACAATTTTTGAGAAGCG 59.021 47.619 0.00 0.00 0.00 4.68
5622 5865 2.584791 CGGACAATTTTTGAGAAGCGG 58.415 47.619 0.00 0.00 0.00 5.52
5623 5866 2.668279 CGGACAATTTTTGAGAAGCGGG 60.668 50.000 0.00 0.00 0.00 6.13
5624 5867 2.328473 GACAATTTTTGAGAAGCGGGC 58.672 47.619 0.00 0.00 0.00 6.13
5625 5868 1.000843 ACAATTTTTGAGAAGCGGGCC 59.999 47.619 0.00 0.00 0.00 5.80
5626 5869 1.000731 CAATTTTTGAGAAGCGGGCCA 59.999 47.619 4.39 0.00 0.00 5.36
5627 5870 1.560505 ATTTTTGAGAAGCGGGCCAT 58.439 45.000 4.39 0.00 0.00 4.40
5628 5871 0.887933 TTTTTGAGAAGCGGGCCATC 59.112 50.000 4.39 0.00 0.00 3.51
5629 5872 0.965363 TTTTGAGAAGCGGGCCATCC 60.965 55.000 4.39 0.00 0.00 3.51
5630 5873 2.135903 TTTGAGAAGCGGGCCATCCA 62.136 55.000 4.39 0.00 34.36 3.41
5631 5874 2.135903 TTGAGAAGCGGGCCATCCAA 62.136 55.000 4.39 3.04 34.36 3.53
5632 5875 1.152881 GAGAAGCGGGCCATCCAAT 60.153 57.895 4.39 0.00 34.36 3.16
5633 5876 1.152881 AGAAGCGGGCCATCCAATC 60.153 57.895 4.39 0.00 34.36 2.67
5634 5877 1.152881 GAAGCGGGCCATCCAATCT 60.153 57.895 4.39 0.00 34.36 2.40
5635 5878 1.450531 GAAGCGGGCCATCCAATCTG 61.451 60.000 4.39 0.00 34.36 2.90
5636 5879 1.925285 AAGCGGGCCATCCAATCTGA 61.925 55.000 4.39 0.00 34.36 3.27
5637 5880 1.228367 GCGGGCCATCCAATCTGAT 60.228 57.895 4.39 0.00 34.36 2.90
5638 5881 1.521450 GCGGGCCATCCAATCTGATG 61.521 60.000 4.39 0.00 41.47 3.07
5639 5882 1.521450 CGGGCCATCCAATCTGATGC 61.521 60.000 4.39 0.00 40.66 3.91
5640 5883 1.521450 GGGCCATCCAATCTGATGCG 61.521 60.000 4.39 0.00 40.66 4.73
5641 5884 1.285023 GCCATCCAATCTGATGCGC 59.715 57.895 0.00 0.00 40.66 6.09
5642 5885 1.954528 CCATCCAATCTGATGCGCC 59.045 57.895 4.18 0.00 40.66 6.53
5643 5886 0.820482 CCATCCAATCTGATGCGCCA 60.820 55.000 4.18 0.00 40.66 5.69
5644 5887 1.026584 CATCCAATCTGATGCGCCAA 58.973 50.000 4.18 0.00 36.07 4.52
5645 5888 1.406180 CATCCAATCTGATGCGCCAAA 59.594 47.619 4.18 0.00 36.07 3.28
5646 5889 1.766494 TCCAATCTGATGCGCCAAAT 58.234 45.000 4.18 0.00 0.00 2.32
5647 5890 2.929641 TCCAATCTGATGCGCCAAATA 58.070 42.857 4.18 0.00 0.00 1.40
5648 5891 2.880268 TCCAATCTGATGCGCCAAATAG 59.120 45.455 4.18 0.00 0.00 1.73
5649 5892 2.880268 CCAATCTGATGCGCCAAATAGA 59.120 45.455 4.18 1.91 0.00 1.98
5650 5893 3.316029 CCAATCTGATGCGCCAAATAGAA 59.684 43.478 4.18 0.00 0.00 2.10
5651 5894 4.534168 CAATCTGATGCGCCAAATAGAAG 58.466 43.478 4.18 0.00 0.00 2.85
5652 5895 1.942657 TCTGATGCGCCAAATAGAAGC 59.057 47.619 4.18 0.00 0.00 3.86
5657 5900 2.762360 CGCCAAATAGAAGCGGACA 58.238 52.632 0.00 0.00 45.88 4.02
5658 5901 1.299541 CGCCAAATAGAAGCGGACAT 58.700 50.000 0.00 0.00 45.88 3.06
5659 5902 1.003545 CGCCAAATAGAAGCGGACATG 60.004 52.381 0.00 0.00 45.88 3.21
5660 5903 2.288666 GCCAAATAGAAGCGGACATGA 58.711 47.619 0.00 0.00 0.00 3.07
5661 5904 2.032178 GCCAAATAGAAGCGGACATGAC 59.968 50.000 0.00 0.00 0.00 3.06
5662 5905 3.270027 CCAAATAGAAGCGGACATGACA 58.730 45.455 0.00 0.00 0.00 3.58
5663 5906 3.879295 CCAAATAGAAGCGGACATGACAT 59.121 43.478 0.00 0.00 0.00 3.06
5664 5907 4.336433 CCAAATAGAAGCGGACATGACATT 59.664 41.667 0.00 0.00 0.00 2.71
5665 5908 5.163622 CCAAATAGAAGCGGACATGACATTT 60.164 40.000 0.00 0.00 0.00 2.32
5666 5909 6.324819 CAAATAGAAGCGGACATGACATTTT 58.675 36.000 0.00 0.00 0.00 1.82
5667 5910 5.741388 ATAGAAGCGGACATGACATTTTC 57.259 39.130 0.00 0.00 0.00 2.29
5668 5911 3.411446 AGAAGCGGACATGACATTTTCA 58.589 40.909 0.00 0.00 39.11 2.69
5669 5912 4.012374 AGAAGCGGACATGACATTTTCAT 58.988 39.130 0.00 0.00 46.75 2.57
5670 5913 5.185454 AGAAGCGGACATGACATTTTCATA 58.815 37.500 0.00 0.00 43.68 2.15
5671 5914 5.647658 AGAAGCGGACATGACATTTTCATAA 59.352 36.000 0.00 0.00 43.68 1.90
5672 5915 6.319658 AGAAGCGGACATGACATTTTCATAAT 59.680 34.615 0.00 0.00 43.68 1.28
5673 5916 7.498900 AGAAGCGGACATGACATTTTCATAATA 59.501 33.333 0.00 0.00 43.68 0.98
5674 5917 7.566760 AGCGGACATGACATTTTCATAATAA 57.433 32.000 0.00 0.00 43.68 1.40
5675 5918 7.995289 AGCGGACATGACATTTTCATAATAAA 58.005 30.769 0.00 0.00 43.68 1.40
5676 5919 8.632679 AGCGGACATGACATTTTCATAATAAAT 58.367 29.630 0.00 0.00 43.68 1.40
5677 5920 9.248291 GCGGACATGACATTTTCATAATAAATT 57.752 29.630 0.00 0.00 43.68 1.82
5708 5951 5.945466 TTTTACATCGGAGTTAACCAACC 57.055 39.130 0.88 3.18 35.05 3.77
5709 5952 2.484742 ACATCGGAGTTAACCAACCC 57.515 50.000 0.88 0.00 35.05 4.11
5710 5953 1.982958 ACATCGGAGTTAACCAACCCT 59.017 47.619 0.88 0.00 35.05 4.34
5711 5954 3.175594 ACATCGGAGTTAACCAACCCTA 58.824 45.455 0.88 0.00 35.05 3.53
5712 5955 3.197116 ACATCGGAGTTAACCAACCCTAG 59.803 47.826 0.88 0.00 35.05 3.02
5713 5956 2.893424 TCGGAGTTAACCAACCCTAGT 58.107 47.619 0.88 0.00 35.05 2.57
5714 5957 2.827921 TCGGAGTTAACCAACCCTAGTC 59.172 50.000 0.88 0.00 35.05 2.59
5715 5958 2.564062 CGGAGTTAACCAACCCTAGTCA 59.436 50.000 0.88 0.00 35.05 3.41
5716 5959 3.007182 CGGAGTTAACCAACCCTAGTCAA 59.993 47.826 0.88 0.00 35.05 3.18
5717 5960 4.503643 CGGAGTTAACCAACCCTAGTCAAA 60.504 45.833 0.88 0.00 35.05 2.69
5718 5961 5.567430 GGAGTTAACCAACCCTAGTCAAAT 58.433 41.667 0.88 0.00 35.05 2.32
5719 5962 5.646793 GGAGTTAACCAACCCTAGTCAAATC 59.353 44.000 0.88 0.00 35.05 2.17
5720 5963 6.449830 AGTTAACCAACCCTAGTCAAATCT 57.550 37.500 0.88 0.00 35.05 2.40
5721 5964 6.849151 AGTTAACCAACCCTAGTCAAATCTT 58.151 36.000 0.88 0.00 35.05 2.40
5722 5965 6.940867 AGTTAACCAACCCTAGTCAAATCTTC 59.059 38.462 0.88 0.00 35.05 2.87
5723 5966 4.993705 ACCAACCCTAGTCAAATCTTCA 57.006 40.909 0.00 0.00 0.00 3.02
5724 5967 4.652822 ACCAACCCTAGTCAAATCTTCAC 58.347 43.478 0.00 0.00 0.00 3.18
5725 5968 4.010349 CCAACCCTAGTCAAATCTTCACC 58.990 47.826 0.00 0.00 0.00 4.02
5726 5969 3.611766 ACCCTAGTCAAATCTTCACCG 57.388 47.619 0.00 0.00 0.00 4.94
5727 5970 2.904434 ACCCTAGTCAAATCTTCACCGT 59.096 45.455 0.00 0.00 0.00 4.83
5728 5971 3.056035 ACCCTAGTCAAATCTTCACCGTC 60.056 47.826 0.00 0.00 0.00 4.79
5729 5972 3.522553 CCTAGTCAAATCTTCACCGTCC 58.477 50.000 0.00 0.00 0.00 4.79
5730 5973 3.195825 CCTAGTCAAATCTTCACCGTCCT 59.804 47.826 0.00 0.00 0.00 3.85
5731 5974 3.771577 AGTCAAATCTTCACCGTCCTT 57.228 42.857 0.00 0.00 0.00 3.36
5732 5975 3.403038 AGTCAAATCTTCACCGTCCTTG 58.597 45.455 0.00 0.00 0.00 3.61
5733 5976 3.139077 GTCAAATCTTCACCGTCCTTGT 58.861 45.455 0.00 0.00 0.00 3.16
5734 5977 3.186613 GTCAAATCTTCACCGTCCTTGTC 59.813 47.826 0.00 0.00 0.00 3.18
5735 5978 3.071023 TCAAATCTTCACCGTCCTTGTCT 59.929 43.478 0.00 0.00 0.00 3.41
5736 5979 3.320673 AATCTTCACCGTCCTTGTCTC 57.679 47.619 0.00 0.00 0.00 3.36
5737 5980 1.699730 TCTTCACCGTCCTTGTCTCA 58.300 50.000 0.00 0.00 0.00 3.27
5738 5981 1.340248 TCTTCACCGTCCTTGTCTCAC 59.660 52.381 0.00 0.00 0.00 3.51
5739 5982 0.031585 TTCACCGTCCTTGTCTCACG 59.968 55.000 0.00 0.00 0.00 4.35
5740 5983 1.105167 TCACCGTCCTTGTCTCACGT 61.105 55.000 0.00 0.00 0.00 4.49
5741 5984 0.663568 CACCGTCCTTGTCTCACGTC 60.664 60.000 0.00 0.00 0.00 4.34
5742 5985 1.080705 CCGTCCTTGTCTCACGTCC 60.081 63.158 0.00 0.00 0.00 4.79
5743 5986 1.524863 CCGTCCTTGTCTCACGTCCT 61.525 60.000 0.00 0.00 0.00 3.85
5744 5987 1.162698 CGTCCTTGTCTCACGTCCTA 58.837 55.000 0.00 0.00 0.00 2.94
5745 5988 1.135746 CGTCCTTGTCTCACGTCCTAC 60.136 57.143 0.00 0.00 0.00 3.18
5746 5989 2.161030 GTCCTTGTCTCACGTCCTACT 58.839 52.381 0.00 0.00 0.00 2.57
5747 5990 2.162008 GTCCTTGTCTCACGTCCTACTC 59.838 54.545 0.00 0.00 0.00 2.59
5748 5991 2.040012 TCCTTGTCTCACGTCCTACTCT 59.960 50.000 0.00 0.00 0.00 3.24
5749 5992 2.820787 CCTTGTCTCACGTCCTACTCTT 59.179 50.000 0.00 0.00 0.00 2.85
5750 5993 3.119779 CCTTGTCTCACGTCCTACTCTTC 60.120 52.174 0.00 0.00 0.00 2.87
5751 5994 3.136009 TGTCTCACGTCCTACTCTTCA 57.864 47.619 0.00 0.00 0.00 3.02
5752 5995 2.812591 TGTCTCACGTCCTACTCTTCAC 59.187 50.000 0.00 0.00 0.00 3.18
5753 5996 2.162008 GTCTCACGTCCTACTCTTCACC 59.838 54.545 0.00 0.00 0.00 4.02
5754 5997 1.130749 CTCACGTCCTACTCTTCACCG 59.869 57.143 0.00 0.00 0.00 4.94
5755 5998 0.170561 CACGTCCTACTCTTCACCGG 59.829 60.000 0.00 0.00 0.00 5.28
5756 5999 0.037303 ACGTCCTACTCTTCACCGGA 59.963 55.000 9.46 0.00 0.00 5.14
5757 6000 1.171308 CGTCCTACTCTTCACCGGAA 58.829 55.000 9.46 0.00 0.00 4.30
5767 6010 3.053828 CACCGGAAGTGGGTACGT 58.946 61.111 9.46 0.00 43.26 3.57
5768 6011 2.266070 CACCGGAAGTGGGTACGTA 58.734 57.895 9.46 0.00 43.26 3.57
5769 6012 0.819582 CACCGGAAGTGGGTACGTAT 59.180 55.000 9.46 0.00 43.26 3.06
5770 6013 0.819582 ACCGGAAGTGGGTACGTATG 59.180 55.000 9.46 0.00 35.58 2.39
5771 6014 0.819582 CCGGAAGTGGGTACGTATGT 59.180 55.000 0.00 0.00 0.00 2.29
5772 6015 1.470285 CCGGAAGTGGGTACGTATGTG 60.470 57.143 0.00 0.00 0.00 3.21
5773 6016 1.203052 CGGAAGTGGGTACGTATGTGT 59.797 52.381 0.00 0.00 0.00 3.72
5774 6017 2.733227 CGGAAGTGGGTACGTATGTGTC 60.733 54.545 0.00 0.00 0.00 3.67
5775 6018 2.417787 GGAAGTGGGTACGTATGTGTCC 60.418 54.545 0.00 0.00 0.00 4.02
5776 6019 1.188863 AGTGGGTACGTATGTGTCCC 58.811 55.000 17.86 17.86 41.18 4.46
5777 6020 0.896923 GTGGGTACGTATGTGTCCCA 59.103 55.000 21.39 21.39 45.08 4.37
5778 6021 0.896923 TGGGTACGTATGTGTCCCAC 59.103 55.000 21.39 3.26 43.62 4.61
5786 6029 2.927856 TGTGTCCCACATCCCGCT 60.928 61.111 0.00 0.00 39.62 5.52
5787 6030 2.125106 GTGTCCCACATCCCGCTC 60.125 66.667 0.00 0.00 34.08 5.03
5788 6031 2.284625 TGTCCCACATCCCGCTCT 60.285 61.111 0.00 0.00 0.00 4.09
5789 6032 1.918293 TGTCCCACATCCCGCTCTT 60.918 57.895 0.00 0.00 0.00 2.85
5790 6033 1.153349 GTCCCACATCCCGCTCTTC 60.153 63.158 0.00 0.00 0.00 2.87
5791 6034 1.612146 TCCCACATCCCGCTCTTCA 60.612 57.895 0.00 0.00 0.00 3.02
5792 6035 0.982852 TCCCACATCCCGCTCTTCAT 60.983 55.000 0.00 0.00 0.00 2.57
5793 6036 0.533755 CCCACATCCCGCTCTTCATC 60.534 60.000 0.00 0.00 0.00 2.92
5794 6037 0.877649 CCACATCCCGCTCTTCATCG 60.878 60.000 0.00 0.00 0.00 3.84
5795 6038 0.877649 CACATCCCGCTCTTCATCGG 60.878 60.000 0.00 0.00 44.89 4.18
5802 6045 2.392933 CGCTCTTCATCGGAGTCTAC 57.607 55.000 0.00 0.00 33.73 2.59
5803 6046 1.002251 CGCTCTTCATCGGAGTCTACC 60.002 57.143 0.00 0.00 33.73 3.18
5804 6047 2.303175 GCTCTTCATCGGAGTCTACCT 58.697 52.381 0.00 0.00 33.73 3.08
5805 6048 2.691011 GCTCTTCATCGGAGTCTACCTT 59.309 50.000 0.00 0.00 33.73 3.50
5806 6049 3.884091 GCTCTTCATCGGAGTCTACCTTA 59.116 47.826 0.00 0.00 33.73 2.69
5807 6050 4.023536 GCTCTTCATCGGAGTCTACCTTAG 60.024 50.000 0.00 0.00 33.73 2.18
5808 6051 3.884091 TCTTCATCGGAGTCTACCTTAGC 59.116 47.826 0.00 0.00 0.00 3.09
5809 6052 2.219458 TCATCGGAGTCTACCTTAGCG 58.781 52.381 0.00 0.00 0.00 4.26
5810 6053 1.267261 CATCGGAGTCTACCTTAGCGG 59.733 57.143 0.00 0.00 39.35 5.52
5811 6054 1.099879 TCGGAGTCTACCTTAGCGGC 61.100 60.000 0.00 0.00 35.61 6.53
5812 6055 1.740905 GGAGTCTACCTTAGCGGCC 59.259 63.158 0.00 0.00 35.61 6.13
5813 6056 1.041447 GGAGTCTACCTTAGCGGCCA 61.041 60.000 2.24 0.00 35.61 5.36
5814 6057 0.822164 GAGTCTACCTTAGCGGCCAA 59.178 55.000 2.24 0.00 35.61 4.52
5815 6058 0.535797 AGTCTACCTTAGCGGCCAAC 59.464 55.000 2.24 0.00 35.61 3.77
5817 6060 1.217244 CTACCTTAGCGGCCAACGT 59.783 57.895 2.24 0.00 46.52 3.99
5818 6061 0.804933 CTACCTTAGCGGCCAACGTC 60.805 60.000 2.24 0.00 46.52 4.34
5819 6062 2.546645 TACCTTAGCGGCCAACGTCG 62.547 60.000 2.24 0.00 46.52 5.12
5825 6068 2.202690 CGGCCAACGTCGCTGATA 60.203 61.111 2.24 0.00 37.93 2.15
5826 6069 2.230940 CGGCCAACGTCGCTGATAG 61.231 63.158 2.24 0.00 37.93 2.08
5827 6070 1.141019 GGCCAACGTCGCTGATAGA 59.859 57.895 0.00 0.00 0.00 1.98
5828 6071 0.872021 GGCCAACGTCGCTGATAGAG 60.872 60.000 0.00 0.00 0.00 2.43
5829 6072 0.872021 GCCAACGTCGCTGATAGAGG 60.872 60.000 0.00 0.00 0.00 3.69
5830 6073 0.456221 CCAACGTCGCTGATAGAGGT 59.544 55.000 0.00 0.00 38.21 3.85
5831 6074 1.674441 CCAACGTCGCTGATAGAGGTA 59.326 52.381 0.00 0.00 35.94 3.08
5832 6075 2.098607 CCAACGTCGCTGATAGAGGTAA 59.901 50.000 0.00 0.00 35.94 2.85
5833 6076 3.364062 CAACGTCGCTGATAGAGGTAAG 58.636 50.000 0.00 0.00 35.94 2.34
5834 6077 1.948145 ACGTCGCTGATAGAGGTAAGG 59.052 52.381 0.00 0.00 35.32 2.69
5835 6078 1.948145 CGTCGCTGATAGAGGTAAGGT 59.052 52.381 0.00 0.00 0.00 3.50
5836 6079 2.031857 CGTCGCTGATAGAGGTAAGGTC 60.032 54.545 0.00 0.00 0.00 3.85
5837 6080 2.031857 GTCGCTGATAGAGGTAAGGTCG 60.032 54.545 0.00 0.00 0.00 4.79
5838 6081 1.335142 CGCTGATAGAGGTAAGGTCGC 60.335 57.143 0.00 0.00 0.00 5.19
5839 6082 1.000052 GCTGATAGAGGTAAGGTCGCC 60.000 57.143 0.00 0.00 0.00 5.54
5840 6083 1.267261 CTGATAGAGGTAAGGTCGCCG 59.733 57.143 0.00 0.00 0.00 6.46
5841 6084 1.134007 TGATAGAGGTAAGGTCGCCGA 60.134 52.381 0.00 0.00 0.00 5.54
5842 6085 2.161030 GATAGAGGTAAGGTCGCCGAT 58.839 52.381 0.00 0.00 0.00 4.18
5843 6086 1.602311 TAGAGGTAAGGTCGCCGATC 58.398 55.000 0.00 0.00 0.00 3.69
5844 6087 0.395311 AGAGGTAAGGTCGCCGATCA 60.395 55.000 0.00 0.00 0.00 2.92
5845 6088 0.458669 GAGGTAAGGTCGCCGATCAA 59.541 55.000 0.00 0.00 0.00 2.57
5846 6089 0.175073 AGGTAAGGTCGCCGATCAAC 59.825 55.000 0.00 0.00 0.00 3.18
5847 6090 0.808847 GGTAAGGTCGCCGATCAACC 60.809 60.000 0.00 2.93 0.00 3.77
5848 6091 0.175073 GTAAGGTCGCCGATCAACCT 59.825 55.000 0.00 0.00 45.32 3.50
5849 6092 1.406539 GTAAGGTCGCCGATCAACCTA 59.593 52.381 0.00 0.00 42.58 3.08
5850 6093 0.460311 AAGGTCGCCGATCAACCTAG 59.540 55.000 0.00 0.00 42.58 3.02
5851 6094 0.395311 AGGTCGCCGATCAACCTAGA 60.395 55.000 0.00 0.00 41.61 2.43
5852 6095 0.248949 GGTCGCCGATCAACCTAGAC 60.249 60.000 0.00 0.00 0.00 2.59
5853 6096 0.591741 GTCGCCGATCAACCTAGACG 60.592 60.000 0.00 0.00 0.00 4.18
5854 6097 1.299165 CGCCGATCAACCTAGACGG 60.299 63.158 0.00 0.00 45.26 4.79
5862 6105 2.771525 ACCTAGACGGTCTGGCCT 59.228 61.111 20.58 2.76 44.93 5.19
5863 6106 2.005095 ACCTAGACGGTCTGGCCTA 58.995 57.895 20.58 0.00 44.93 3.93
5864 6107 0.556747 ACCTAGACGGTCTGGCCTAT 59.443 55.000 20.58 1.00 44.93 2.57
5865 6108 1.063114 ACCTAGACGGTCTGGCCTATT 60.063 52.381 20.58 1.78 44.93 1.73
5866 6109 1.341531 CCTAGACGGTCTGGCCTATTG 59.658 57.143 20.58 0.17 34.25 1.90
5867 6110 1.341531 CTAGACGGTCTGGCCTATTGG 59.658 57.143 20.58 0.00 34.25 3.16
5879 6122 2.519377 CCTATTGGCATTGCACATGG 57.481 50.000 11.39 3.58 0.00 3.66
5880 6123 2.033372 CCTATTGGCATTGCACATGGA 58.967 47.619 11.39 0.00 0.00 3.41
5881 6124 2.223876 CCTATTGGCATTGCACATGGAC 60.224 50.000 11.39 0.00 0.00 4.02
5882 6125 1.563924 ATTGGCATTGCACATGGACT 58.436 45.000 11.39 0.00 0.00 3.85
5883 6126 0.889994 TTGGCATTGCACATGGACTC 59.110 50.000 11.39 0.00 0.00 3.36
5884 6127 0.251253 TGGCATTGCACATGGACTCA 60.251 50.000 11.39 0.00 0.00 3.41
5885 6128 1.108776 GGCATTGCACATGGACTCAT 58.891 50.000 11.39 0.00 0.00 2.90
5886 6129 2.300433 GGCATTGCACATGGACTCATA 58.700 47.619 11.39 0.00 31.33 2.15
5887 6130 2.689471 GGCATTGCACATGGACTCATAA 59.311 45.455 11.39 0.00 31.33 1.90
5888 6131 3.243301 GGCATTGCACATGGACTCATAAG 60.243 47.826 11.39 0.00 31.33 1.73
5889 6132 3.243301 GCATTGCACATGGACTCATAAGG 60.243 47.826 3.15 0.00 31.33 2.69
5890 6133 2.042686 TGCACATGGACTCATAAGGC 57.957 50.000 0.00 0.00 31.33 4.35
5891 6134 0.940126 GCACATGGACTCATAAGGCG 59.060 55.000 0.00 0.00 31.33 5.52
5892 6135 0.940126 CACATGGACTCATAAGGCGC 59.060 55.000 0.00 0.00 31.33 6.53
5893 6136 0.179045 ACATGGACTCATAAGGCGCC 60.179 55.000 21.89 21.89 31.33 6.53
5894 6137 0.886490 CATGGACTCATAAGGCGCCC 60.886 60.000 26.15 4.35 31.33 6.13
5895 6138 1.344953 ATGGACTCATAAGGCGCCCA 61.345 55.000 26.15 12.66 0.00 5.36
5896 6139 1.523938 GGACTCATAAGGCGCCCAC 60.524 63.158 26.15 5.54 0.00 4.61
5897 6140 1.522569 GACTCATAAGGCGCCCACT 59.477 57.895 26.15 11.05 0.00 4.00
5898 6141 0.811616 GACTCATAAGGCGCCCACTG 60.812 60.000 26.15 17.92 0.00 3.66
5899 6142 2.124736 TCATAAGGCGCCCACTGC 60.125 61.111 26.15 0.00 0.00 4.40
5900 6143 2.124570 CATAAGGCGCCCACTGCT 60.125 61.111 26.15 0.00 38.05 4.24
5901 6144 2.182842 CATAAGGCGCCCACTGCTC 61.183 63.158 26.15 0.00 38.05 4.26
5902 6145 2.669133 ATAAGGCGCCCACTGCTCA 61.669 57.895 26.15 0.00 38.05 4.26
5903 6146 1.987807 ATAAGGCGCCCACTGCTCAT 61.988 55.000 26.15 0.00 38.05 2.90
5904 6147 2.593468 TAAGGCGCCCACTGCTCATC 62.593 60.000 26.15 0.00 38.05 2.92
5906 6149 4.783621 GCGCCCACTGCTCATCCA 62.784 66.667 0.00 0.00 38.05 3.41
5907 6150 2.821366 CGCCCACTGCTCATCCAC 60.821 66.667 0.00 0.00 38.05 4.02
5908 6151 2.439156 GCCCACTGCTCATCCACC 60.439 66.667 0.00 0.00 36.87 4.61
5909 6152 3.080641 CCCACTGCTCATCCACCA 58.919 61.111 0.00 0.00 0.00 4.17
5910 6153 1.611419 CCCACTGCTCATCCACCAT 59.389 57.895 0.00 0.00 0.00 3.55
5911 6154 0.750546 CCCACTGCTCATCCACCATG 60.751 60.000 0.00 0.00 0.00 3.66
5912 6155 1.381928 CCACTGCTCATCCACCATGC 61.382 60.000 0.00 0.00 31.70 4.06
5913 6156 1.077212 ACTGCTCATCCACCATGCC 60.077 57.895 0.00 0.00 31.70 4.40
5914 6157 1.826921 CTGCTCATCCACCATGCCC 60.827 63.158 0.00 0.00 31.70 5.36
5915 6158 2.276409 GCTCATCCACCATGCCCA 59.724 61.111 0.00 0.00 31.70 5.36
5916 6159 1.152610 GCTCATCCACCATGCCCAT 60.153 57.895 0.00 0.00 31.70 4.00
5917 6160 0.111061 GCTCATCCACCATGCCCATA 59.889 55.000 0.00 0.00 31.70 2.74
5918 6161 1.272313 GCTCATCCACCATGCCCATAT 60.272 52.381 0.00 0.00 31.70 1.78
5919 6162 2.820485 GCTCATCCACCATGCCCATATT 60.820 50.000 0.00 0.00 31.70 1.28
5920 6163 3.087031 CTCATCCACCATGCCCATATTC 58.913 50.000 0.00 0.00 31.70 1.75
5921 6164 2.718062 TCATCCACCATGCCCATATTCT 59.282 45.455 0.00 0.00 31.70 2.40
5922 6165 2.957402 TCCACCATGCCCATATTCTC 57.043 50.000 0.00 0.00 0.00 2.87
5923 6166 1.425066 TCCACCATGCCCATATTCTCC 59.575 52.381 0.00 0.00 0.00 3.71
5924 6167 1.527034 CACCATGCCCATATTCTCCG 58.473 55.000 0.00 0.00 0.00 4.63
5925 6168 1.140312 ACCATGCCCATATTCTCCGT 58.860 50.000 0.00 0.00 0.00 4.69
5926 6169 1.202806 ACCATGCCCATATTCTCCGTG 60.203 52.381 0.00 0.00 0.00 4.94
5927 6170 1.072173 CCATGCCCATATTCTCCGTGA 59.928 52.381 0.00 0.00 0.00 4.35
5928 6171 2.420642 CATGCCCATATTCTCCGTGAG 58.579 52.381 0.00 0.00 0.00 3.51
5929 6172 1.496060 TGCCCATATTCTCCGTGAGT 58.504 50.000 1.60 0.00 0.00 3.41
5930 6173 2.673258 TGCCCATATTCTCCGTGAGTA 58.327 47.619 1.60 0.00 0.00 2.59
5931 6174 3.239449 TGCCCATATTCTCCGTGAGTAT 58.761 45.455 1.60 0.94 0.00 2.12
5932 6175 3.006859 TGCCCATATTCTCCGTGAGTATG 59.993 47.826 9.60 9.60 41.90 2.39
5933 6176 3.258372 GCCCATATTCTCCGTGAGTATGA 59.742 47.826 14.98 0.00 43.70 2.15
5934 6177 4.810790 CCCATATTCTCCGTGAGTATGAC 58.189 47.826 14.98 0.00 43.70 3.06
5935 6178 4.322049 CCCATATTCTCCGTGAGTATGACC 60.322 50.000 14.98 0.00 43.70 4.02
5936 6179 4.476862 CATATTCTCCGTGAGTATGACCG 58.523 47.826 10.52 0.00 43.70 4.79
5937 6180 1.830279 TTCTCCGTGAGTATGACCGT 58.170 50.000 1.60 0.00 0.00 4.83
5938 6181 1.092348 TCTCCGTGAGTATGACCGTG 58.908 55.000 1.60 0.00 0.00 4.94
5939 6182 1.092348 CTCCGTGAGTATGACCGTGA 58.908 55.000 0.00 0.00 0.00 4.35
5940 6183 1.676529 CTCCGTGAGTATGACCGTGAT 59.323 52.381 0.00 0.00 0.00 3.06
5941 6184 1.404035 TCCGTGAGTATGACCGTGATG 59.596 52.381 0.00 0.00 0.00 3.07
5942 6185 1.536072 CCGTGAGTATGACCGTGATGG 60.536 57.143 0.00 0.00 46.41 3.51
5943 6186 1.571919 GTGAGTATGACCGTGATGGC 58.428 55.000 0.00 0.00 43.94 4.40
5944 6187 0.464036 TGAGTATGACCGTGATGGCC 59.536 55.000 0.00 0.00 43.94 5.36
5945 6188 0.753262 GAGTATGACCGTGATGGCCT 59.247 55.000 3.32 0.00 43.94 5.19
5946 6189 1.961394 GAGTATGACCGTGATGGCCTA 59.039 52.381 3.32 0.00 43.94 3.93
5947 6190 1.687123 AGTATGACCGTGATGGCCTAC 59.313 52.381 3.32 0.00 43.94 3.18
5948 6191 1.687123 GTATGACCGTGATGGCCTACT 59.313 52.381 3.32 0.00 43.94 2.57
5949 6192 1.204146 ATGACCGTGATGGCCTACTT 58.796 50.000 3.32 0.00 43.94 2.24
5950 6193 0.249120 TGACCGTGATGGCCTACTTG 59.751 55.000 3.32 0.00 43.94 3.16
5951 6194 0.249398 GACCGTGATGGCCTACTTGT 59.751 55.000 3.32 1.03 43.94 3.16
5952 6195 0.690762 ACCGTGATGGCCTACTTGTT 59.309 50.000 3.32 0.00 43.94 2.83
5953 6196 1.073284 ACCGTGATGGCCTACTTGTTT 59.927 47.619 3.32 0.00 43.94 2.83
5954 6197 1.468520 CCGTGATGGCCTACTTGTTTG 59.531 52.381 3.32 0.00 0.00 2.93
5955 6198 1.135689 CGTGATGGCCTACTTGTTTGC 60.136 52.381 3.32 0.00 0.00 3.68
5956 6199 2.162681 GTGATGGCCTACTTGTTTGCT 58.837 47.619 3.32 0.00 0.00 3.91
5957 6200 2.558359 GTGATGGCCTACTTGTTTGCTT 59.442 45.455 3.32 0.00 0.00 3.91
5958 6201 2.557924 TGATGGCCTACTTGTTTGCTTG 59.442 45.455 3.32 0.00 0.00 4.01
5959 6202 0.673437 TGGCCTACTTGTTTGCTTGC 59.327 50.000 3.32 0.00 0.00 4.01
5960 6203 0.961753 GGCCTACTTGTTTGCTTGCT 59.038 50.000 0.00 0.00 0.00 3.91
5961 6204 1.341209 GGCCTACTTGTTTGCTTGCTT 59.659 47.619 0.00 0.00 0.00 3.91
5962 6205 2.397549 GCCTACTTGTTTGCTTGCTTG 58.602 47.619 0.00 0.00 0.00 4.01
5963 6206 2.223805 GCCTACTTGTTTGCTTGCTTGT 60.224 45.455 0.00 0.00 0.00 3.16
5964 6207 3.632189 CCTACTTGTTTGCTTGCTTGTC 58.368 45.455 0.00 0.00 0.00 3.18
5965 6208 2.193306 ACTTGTTTGCTTGCTTGTCG 57.807 45.000 0.00 0.00 0.00 4.35
5966 6209 1.742831 ACTTGTTTGCTTGCTTGTCGA 59.257 42.857 0.00 0.00 0.00 4.20
5967 6210 2.358898 ACTTGTTTGCTTGCTTGTCGAT 59.641 40.909 0.00 0.00 0.00 3.59
5968 6211 2.404265 TGTTTGCTTGCTTGTCGATG 57.596 45.000 0.00 0.00 0.00 3.84
5969 6212 1.946081 TGTTTGCTTGCTTGTCGATGA 59.054 42.857 0.00 0.00 0.00 2.92
5970 6213 2.553602 TGTTTGCTTGCTTGTCGATGAT 59.446 40.909 0.00 0.00 0.00 2.45
5971 6214 3.166657 GTTTGCTTGCTTGTCGATGATC 58.833 45.455 0.00 0.00 0.00 2.92
5972 6215 2.391616 TGCTTGCTTGTCGATGATCT 57.608 45.000 0.00 0.00 0.00 2.75
5973 6216 2.004733 TGCTTGCTTGTCGATGATCTG 58.995 47.619 0.00 0.00 0.00 2.90
5974 6217 2.274437 GCTTGCTTGTCGATGATCTGA 58.726 47.619 0.00 0.00 0.00 3.27
5975 6218 2.030213 GCTTGCTTGTCGATGATCTGAC 59.970 50.000 9.42 9.42 35.67 3.51
5976 6219 2.299993 TGCTTGTCGATGATCTGACC 57.700 50.000 12.43 2.11 34.18 4.02
5977 6220 1.827344 TGCTTGTCGATGATCTGACCT 59.173 47.619 12.43 0.00 34.18 3.85
5978 6221 2.159184 TGCTTGTCGATGATCTGACCTC 60.159 50.000 12.43 5.15 34.18 3.85
5979 6222 2.159184 GCTTGTCGATGATCTGACCTCA 60.159 50.000 12.43 0.00 34.18 3.86
5980 6223 3.704512 CTTGTCGATGATCTGACCTCAG 58.295 50.000 12.43 0.00 45.08 3.35
5981 6224 2.728007 TGTCGATGATCTGACCTCAGT 58.272 47.619 12.43 0.00 44.12 3.41
5982 6225 2.424956 TGTCGATGATCTGACCTCAGTG 59.575 50.000 12.43 0.00 44.12 3.66
5983 6226 2.685388 GTCGATGATCTGACCTCAGTGA 59.315 50.000 2.25 0.00 44.12 3.41
5984 6227 2.948315 TCGATGATCTGACCTCAGTGAG 59.052 50.000 13.56 13.56 44.12 3.51
5985 6228 2.543445 CGATGATCTGACCTCAGTGAGC 60.543 54.545 15.10 2.68 44.12 4.26
5986 6229 1.189752 TGATCTGACCTCAGTGAGCC 58.810 55.000 15.10 8.98 44.12 4.70
5987 6230 0.102120 GATCTGACCTCAGTGAGCCG 59.898 60.000 15.10 4.75 44.12 5.52
5988 6231 1.326213 ATCTGACCTCAGTGAGCCGG 61.326 60.000 15.10 12.84 44.12 6.13
5989 6232 2.203640 TGACCTCAGTGAGCCGGT 60.204 61.111 15.10 8.48 0.00 5.28
5990 6233 2.262915 GACCTCAGTGAGCCGGTG 59.737 66.667 15.10 3.24 0.00 4.94
5991 6234 2.524394 ACCTCAGTGAGCCGGTGT 60.524 61.111 15.10 3.91 0.00 4.16
5992 6235 2.100879 GACCTCAGTGAGCCGGTGTT 62.101 60.000 15.10 0.00 0.00 3.32
5993 6236 1.071471 CCTCAGTGAGCCGGTGTTT 59.929 57.895 15.10 0.00 0.00 2.83
5994 6237 0.951040 CCTCAGTGAGCCGGTGTTTC 60.951 60.000 15.10 0.00 0.00 2.78
5995 6238 0.034059 CTCAGTGAGCCGGTGTTTCT 59.966 55.000 7.33 0.00 0.00 2.52
5996 6239 0.033504 TCAGTGAGCCGGTGTTTCTC 59.966 55.000 1.90 0.46 0.00 2.87
5997 6240 0.249868 CAGTGAGCCGGTGTTTCTCA 60.250 55.000 1.90 3.65 34.78 3.27
5998 6241 0.687354 AGTGAGCCGGTGTTTCTCAT 59.313 50.000 11.25 0.26 38.85 2.90
5999 6242 0.798776 GTGAGCCGGTGTTTCTCATG 59.201 55.000 11.25 0.00 38.85 3.07
6000 6243 0.684535 TGAGCCGGTGTTTCTCATGA 59.315 50.000 1.90 0.00 32.48 3.07
6001 6244 1.071542 TGAGCCGGTGTTTCTCATGAA 59.928 47.619 1.90 0.00 32.48 2.57
6002 6245 1.734465 GAGCCGGTGTTTCTCATGAAG 59.266 52.381 1.90 0.00 33.28 3.02
6003 6246 0.169009 GCCGGTGTTTCTCATGAAGC 59.831 55.000 1.90 0.00 34.58 3.86
6004 6247 1.813513 CCGGTGTTTCTCATGAAGCT 58.186 50.000 0.00 0.00 34.99 3.74
6005 6248 2.935238 GCCGGTGTTTCTCATGAAGCTA 60.935 50.000 1.90 0.00 34.99 3.32
6006 6249 2.932614 CCGGTGTTTCTCATGAAGCTAG 59.067 50.000 0.00 0.00 34.99 3.42
6007 6250 3.589988 CGGTGTTTCTCATGAAGCTAGT 58.410 45.455 0.00 0.00 34.99 2.57
6008 6251 3.997021 CGGTGTTTCTCATGAAGCTAGTT 59.003 43.478 0.00 0.00 34.99 2.24
6009 6252 4.143030 CGGTGTTTCTCATGAAGCTAGTTG 60.143 45.833 0.00 0.00 34.99 3.16
6010 6253 4.757149 GGTGTTTCTCATGAAGCTAGTTGT 59.243 41.667 0.00 0.00 34.99 3.32
6011 6254 5.334414 GGTGTTTCTCATGAAGCTAGTTGTG 60.334 44.000 0.00 0.00 34.99 3.33
6012 6255 4.214119 TGTTTCTCATGAAGCTAGTTGTGC 59.786 41.667 0.00 0.00 34.99 4.57
6013 6256 2.977914 TCTCATGAAGCTAGTTGTGCC 58.022 47.619 0.00 0.00 0.00 5.01
6014 6257 2.568956 TCTCATGAAGCTAGTTGTGCCT 59.431 45.455 0.00 0.00 0.00 4.75
6015 6258 3.008375 TCTCATGAAGCTAGTTGTGCCTT 59.992 43.478 0.00 0.00 0.00 4.35
6016 6259 3.338249 TCATGAAGCTAGTTGTGCCTTC 58.662 45.455 0.00 0.00 0.00 3.46
6017 6260 1.795768 TGAAGCTAGTTGTGCCTTCG 58.204 50.000 0.00 0.00 0.00 3.79
6018 6261 0.444260 GAAGCTAGTTGTGCCTTCGC 59.556 55.000 0.00 0.00 0.00 4.70
6019 6262 0.955919 AAGCTAGTTGTGCCTTCGCC 60.956 55.000 0.00 0.00 0.00 5.54
6020 6263 1.671054 GCTAGTTGTGCCTTCGCCA 60.671 57.895 0.00 0.00 0.00 5.69
6021 6264 1.026718 GCTAGTTGTGCCTTCGCCAT 61.027 55.000 0.00 0.00 0.00 4.40
6022 6265 0.729116 CTAGTTGTGCCTTCGCCATG 59.271 55.000 0.00 0.00 0.00 3.66
6023 6266 0.323302 TAGTTGTGCCTTCGCCATGA 59.677 50.000 0.00 0.00 0.00 3.07
6024 6267 0.322816 AGTTGTGCCTTCGCCATGAT 60.323 50.000 0.00 0.00 0.00 2.45
6025 6268 0.179156 GTTGTGCCTTCGCCATGATG 60.179 55.000 0.00 0.00 0.00 3.07
6026 6269 0.322366 TTGTGCCTTCGCCATGATGA 60.322 50.000 0.00 0.00 0.00 2.92
6027 6270 1.026182 TGTGCCTTCGCCATGATGAC 61.026 55.000 0.00 0.00 0.00 3.06
6028 6271 1.815003 TGCCTTCGCCATGATGACG 60.815 57.895 0.00 0.00 0.00 4.35
6029 6272 1.815421 GCCTTCGCCATGATGACGT 60.815 57.895 0.29 0.00 0.00 4.34
6030 6273 1.369091 GCCTTCGCCATGATGACGTT 61.369 55.000 0.29 0.00 0.00 3.99
6031 6274 0.374758 CCTTCGCCATGATGACGTTG 59.625 55.000 0.29 0.00 0.00 4.10
6032 6275 1.078709 CTTCGCCATGATGACGTTGT 58.921 50.000 0.29 0.00 0.00 3.32
6033 6276 2.267426 CTTCGCCATGATGACGTTGTA 58.733 47.619 0.29 0.00 0.00 2.41
6034 6277 1.921243 TCGCCATGATGACGTTGTAG 58.079 50.000 0.29 0.00 0.00 2.74
6035 6278 1.203758 TCGCCATGATGACGTTGTAGT 59.796 47.619 0.29 0.00 0.00 2.73
6036 6279 1.324435 CGCCATGATGACGTTGTAGTG 59.676 52.381 0.00 0.00 0.00 2.74
6037 6280 1.062587 GCCATGATGACGTTGTAGTGC 59.937 52.381 0.00 0.00 0.00 4.40
6038 6281 1.324435 CCATGATGACGTTGTAGTGCG 59.676 52.381 0.00 0.00 0.00 5.34
6039 6282 0.999406 ATGATGACGTTGTAGTGCGC 59.001 50.000 0.00 0.00 0.00 6.09
6040 6283 1.011968 TGATGACGTTGTAGTGCGCC 61.012 55.000 4.18 0.00 0.00 6.53
6041 6284 0.736325 GATGACGTTGTAGTGCGCCT 60.736 55.000 4.18 3.99 0.00 5.52
6042 6285 0.736325 ATGACGTTGTAGTGCGCCTC 60.736 55.000 4.18 0.00 0.00 4.70
6043 6286 2.048503 ACGTTGTAGTGCGCCTCC 60.049 61.111 4.18 0.00 0.00 4.30
6044 6287 3.179265 CGTTGTAGTGCGCCTCCG 61.179 66.667 4.18 0.00 37.57 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 133 5.710984 CGTTGATATATAGGCTCGTTTCCT 58.289 41.667 0.00 0.00 37.72 3.36
128 136 4.243270 GGCGTTGATATATAGGCTCGTTT 58.757 43.478 0.00 0.00 0.00 3.60
144 152 4.722700 CCCTCCCAGGTGGCGTTG 62.723 72.222 0.00 0.00 31.93 4.10
225 249 2.881734 CTTCCTTCCTTCCTGGCTTTT 58.118 47.619 0.00 0.00 35.26 2.27
226 250 1.548809 GCTTCCTTCCTTCCTGGCTTT 60.549 52.381 0.00 0.00 35.26 3.51
227 251 0.038890 GCTTCCTTCCTTCCTGGCTT 59.961 55.000 0.00 0.00 35.26 4.35
229 253 0.962855 GTGCTTCCTTCCTTCCTGGC 60.963 60.000 0.00 0.00 35.26 4.85
297 324 2.819595 GCGGCGCTGGATTTCTGA 60.820 61.111 26.86 0.00 0.00 3.27
312 339 5.035784 TCTGTATGTAGATCAGAATCGCG 57.964 43.478 0.00 0.00 36.97 5.87
326 353 2.703007 GAGCTCAAGGGGATCTGTATGT 59.297 50.000 9.40 0.00 0.00 2.29
329 356 1.692762 GGGAGCTCAAGGGGATCTGTA 60.693 57.143 17.19 0.00 0.00 2.74
331 358 0.693767 AGGGAGCTCAAGGGGATCTG 60.694 60.000 17.19 0.00 0.00 2.90
332 359 0.399806 GAGGGAGCTCAAGGGGATCT 60.400 60.000 17.19 0.00 0.00 2.75
333 360 1.753368 CGAGGGAGCTCAAGGGGATC 61.753 65.000 17.19 1.42 0.00 3.36
334 361 1.764054 CGAGGGAGCTCAAGGGGAT 60.764 63.158 17.19 0.00 0.00 3.85
335 362 2.364317 CGAGGGAGCTCAAGGGGA 60.364 66.667 17.19 0.00 0.00 4.81
336 363 4.168291 GCGAGGGAGCTCAAGGGG 62.168 72.222 17.19 1.31 0.00 4.79
337 364 3.080121 AGCGAGGGAGCTCAAGGG 61.080 66.667 17.19 2.83 45.67 3.95
345 372 3.248630 GATCGAGCGAGCGAGGGAG 62.249 68.421 6.24 0.00 44.26 4.30
376 413 3.348119 GAAACCCTCACCTCCAAATCTC 58.652 50.000 0.00 0.00 0.00 2.75
401 438 0.449388 GAGTCCGTACGTTCGTCCAT 59.551 55.000 15.21 0.00 0.00 3.41
464 561 4.220533 GAGATGATCGAGCAATTTTGGG 57.779 45.455 7.76 0.00 0.00 4.12
538 646 3.335356 AATCTGGGTGGGCAGAGCG 62.335 63.158 0.00 0.00 0.00 5.03
606 714 4.841617 AGCCTCCAGATCGCGGGA 62.842 66.667 6.13 4.03 36.88 5.14
608 716 4.637489 CGAGCCTCCAGATCGCGG 62.637 72.222 6.13 0.00 0.00 6.46
641 749 2.099098 CCCACACAAAGAGAAAAACGCT 59.901 45.455 0.00 0.00 0.00 5.07
650 758 3.262420 CTCCGATTACCCACACAAAGAG 58.738 50.000 0.00 0.00 0.00 2.85
651 759 2.614481 GCTCCGATTACCCACACAAAGA 60.614 50.000 0.00 0.00 0.00 2.52
652 760 1.737793 GCTCCGATTACCCACACAAAG 59.262 52.381 0.00 0.00 0.00 2.77
653 761 1.349688 AGCTCCGATTACCCACACAAA 59.650 47.619 0.00 0.00 0.00 2.83
654 762 0.981183 AGCTCCGATTACCCACACAA 59.019 50.000 0.00 0.00 0.00 3.33
655 763 0.249120 CAGCTCCGATTACCCACACA 59.751 55.000 0.00 0.00 0.00 3.72
656 764 0.249398 ACAGCTCCGATTACCCACAC 59.751 55.000 0.00 0.00 0.00 3.82
657 765 0.981183 AACAGCTCCGATTACCCACA 59.019 50.000 0.00 0.00 0.00 4.17
658 766 2.109425 AAACAGCTCCGATTACCCAC 57.891 50.000 0.00 0.00 0.00 4.61
664 772 3.694566 GGGTCAATTAAACAGCTCCGATT 59.305 43.478 0.00 0.00 0.00 3.34
682 790 3.550842 GCAAAATCAGACAACACAGGGTC 60.551 47.826 0.00 0.00 0.00 4.46
688 796 2.791004 GCACTGCAAAATCAGACAACAC 59.209 45.455 0.00 0.00 37.51 3.32
711 828 0.034756 CCACACCCATGAACGTCTCA 59.965 55.000 0.00 0.00 38.81 3.27
712 829 0.320374 TCCACACCCATGAACGTCTC 59.680 55.000 0.00 0.00 0.00 3.36
713 830 0.321671 CTCCACACCCATGAACGTCT 59.678 55.000 0.00 0.00 0.00 4.18
715 832 0.250295 CACTCCACACCCATGAACGT 60.250 55.000 0.00 0.00 0.00 3.99
716 833 0.034756 TCACTCCACACCCATGAACG 59.965 55.000 0.00 0.00 0.00 3.95
717 834 1.347707 TCTCACTCCACACCCATGAAC 59.652 52.381 0.00 0.00 0.00 3.18
916 1063 9.140286 TCTTGACGATTACTTCTACTTGAATTG 57.860 33.333 0.00 0.00 33.71 2.32
917 1064 9.706691 TTCTTGACGATTACTTCTACTTGAATT 57.293 29.630 0.00 0.00 33.71 2.17
918 1065 9.360093 CTTCTTGACGATTACTTCTACTTGAAT 57.640 33.333 0.00 0.00 33.71 2.57
919 1066 7.813148 CCTTCTTGACGATTACTTCTACTTGAA 59.187 37.037 0.00 0.00 0.00 2.69
920 1067 7.176165 TCCTTCTTGACGATTACTTCTACTTGA 59.824 37.037 0.00 0.00 0.00 3.02
921 1068 7.313646 TCCTTCTTGACGATTACTTCTACTTG 58.686 38.462 0.00 0.00 0.00 3.16
982 1129 3.737774 GCCATTTGTTGAGCTCTGTTTTC 59.262 43.478 16.19 0.00 0.00 2.29
1022 1169 4.998671 ATCTGCAGAGAAGATCGAAGAA 57.001 40.909 22.96 0.00 43.58 2.52
1023 1170 6.647334 AATATCTGCAGAGAAGATCGAAGA 57.353 37.500 22.96 0.00 45.75 2.87
1027 1174 7.652909 AGAAGAAAATATCTGCAGAGAAGATCG 59.347 37.037 22.96 0.00 38.79 3.69
1028 1175 8.891671 AGAAGAAAATATCTGCAGAGAAGATC 57.108 34.615 22.96 15.76 38.79 2.75
1029 1176 9.328845 GAAGAAGAAAATATCTGCAGAGAAGAT 57.671 33.333 22.96 7.31 38.79 2.40
1037 1184 6.883217 AGCTGAAGAAGAAGAAAATATCTGCA 59.117 34.615 0.00 0.00 38.79 4.41
1044 1191 4.633565 CGCCTAGCTGAAGAAGAAGAAAAT 59.366 41.667 0.00 0.00 0.00 1.82
1048 1195 2.171840 ACGCCTAGCTGAAGAAGAAGA 58.828 47.619 0.00 0.00 0.00 2.87
1050 1197 2.688507 CAACGCCTAGCTGAAGAAGAA 58.311 47.619 0.00 0.00 0.00 2.52
1051 1198 1.673033 GCAACGCCTAGCTGAAGAAGA 60.673 52.381 0.00 0.00 0.00 2.87
1052 1199 0.723981 GCAACGCCTAGCTGAAGAAG 59.276 55.000 0.00 0.00 0.00 2.85
1067 1227 3.391049 AGTCTACGGTTCTGAAAGCAAC 58.609 45.455 0.00 0.00 33.03 4.17
1145 1305 1.879380 TGACAAAATCAAGCTGGACCG 59.121 47.619 0.00 0.00 33.02 4.79
1175 1335 4.949856 CCCAACAACCATAAGCAACTAGAT 59.050 41.667 0.00 0.00 0.00 1.98
1259 1427 0.970937 TTCCTCCTAGCACCGTCCAG 60.971 60.000 0.00 0.00 0.00 3.86
1458 1627 3.838244 AACTGTAAGAAGCCTGTGTGA 57.162 42.857 0.00 0.00 37.43 3.58
1828 2030 3.843619 TCAGTCCAGAACCATAATCACCA 59.156 43.478 0.00 0.00 0.00 4.17
1830 2032 5.491982 ACTTCAGTCCAGAACCATAATCAC 58.508 41.667 0.00 0.00 0.00 3.06
1831 2033 5.762179 ACTTCAGTCCAGAACCATAATCA 57.238 39.130 0.00 0.00 0.00 2.57
1832 2034 6.655003 TCAAACTTCAGTCCAGAACCATAATC 59.345 38.462 0.00 0.00 0.00 1.75
1833 2035 6.431234 GTCAAACTTCAGTCCAGAACCATAAT 59.569 38.462 0.00 0.00 0.00 1.28
1835 2037 5.071788 AGTCAAACTTCAGTCCAGAACCATA 59.928 40.000 0.00 0.00 0.00 2.74
1836 2038 4.137543 GTCAAACTTCAGTCCAGAACCAT 58.862 43.478 0.00 0.00 0.00 3.55
1837 2039 3.199946 AGTCAAACTTCAGTCCAGAACCA 59.800 43.478 0.00 0.00 0.00 3.67
1838 2040 3.561725 CAGTCAAACTTCAGTCCAGAACC 59.438 47.826 0.00 0.00 0.00 3.62
2176 2392 3.042682 TGTGGACTGGAACTCCTAACAA 58.957 45.455 0.00 0.00 36.82 2.83
2500 2724 1.202758 TGCTGTGGGGTTACTGAGTTG 60.203 52.381 0.00 0.00 0.00 3.16
2728 2952 8.946085 GTCCATGTACAAAGTGATTTCTCATTA 58.054 33.333 0.00 0.00 32.98 1.90
2742 2966 6.053632 AGTGATCATCTGTCCATGTACAAA 57.946 37.500 0.00 0.00 0.00 2.83
2865 3092 6.032956 TCTACTGACATTTTCACCGTATGT 57.967 37.500 0.00 0.00 35.33 2.29
2912 3139 1.336424 GCAAACCCACCACCAATAACG 60.336 52.381 0.00 0.00 0.00 3.18
3056 3283 9.866798 GATCACAATAGCATAGTTGATGAGATA 57.133 33.333 0.00 0.00 37.82 1.98
3066 3293 6.126652 ACCTGGAAAGATCACAATAGCATAGT 60.127 38.462 0.00 0.00 0.00 2.12
3329 3558 0.617935 TTCCAATGATCGGTGCCAGA 59.382 50.000 0.00 0.00 0.00 3.86
3353 3582 2.125673 CGGTACAGTGGAAGCCCG 60.126 66.667 0.00 0.00 34.29 6.13
3398 3627 1.313772 ACCTCTCGAGATCATGGTCG 58.686 55.000 17.03 1.02 37.54 4.79
3510 3744 2.237143 TGGGACTTGAGAGCCATTAGTG 59.763 50.000 0.00 0.00 0.00 2.74
3806 4040 9.646427 GAGGATAATGGTGTCAGATAAGATAAC 57.354 37.037 0.00 0.00 0.00 1.89
3827 4061 3.330110 CCCTTCTTGCCTGATATGAGGAT 59.670 47.826 13.03 0.00 34.69 3.24
3951 4185 7.685849 ATTTTATTAGTACTAGAGGGGTGCA 57.314 36.000 2.23 0.00 0.00 4.57
3952 4186 7.818446 GCTATTTTATTAGTACTAGAGGGGTGC 59.182 40.741 2.23 0.61 0.00 5.01
3982 4220 6.183810 TGGTCATGAATAATGCAGAGATCT 57.816 37.500 0.00 0.00 36.11 2.75
4169 4407 4.700213 CAGTACTAACAAATGGAAGGTGGG 59.300 45.833 0.00 0.00 0.00 4.61
4357 4595 3.309296 TCTTATCGCTTCCTCCTTCCAT 58.691 45.455 0.00 0.00 0.00 3.41
4372 4610 6.031751 ACTCCAACTGACAGTTCTCTTATC 57.968 41.667 18.02 0.00 36.03 1.75
4399 4637 7.226720 TCACTGAAGTGGAGAACTATTTTGTTC 59.773 37.037 10.45 0.00 45.65 3.18
4585 4823 2.548493 GGAAAAGGCAAATTGAGCAGCA 60.548 45.455 0.00 0.00 0.00 4.41
4740 4978 2.032681 GAGCCCCAGTGTGACACC 59.967 66.667 12.81 0.00 34.49 4.16
4776 5014 0.688487 CCCCGTCAAAGGTGTAGGAA 59.312 55.000 0.00 0.00 0.00 3.36
4836 5074 2.093783 GGCAAAGAATAGGTTGTCGACG 59.906 50.000 11.62 0.00 0.00 5.12
4869 5107 2.654877 CCCGTGTACTGGACGCTT 59.345 61.111 1.60 0.00 36.33 4.68
5090 5328 1.753848 CTGGAATGAATGGCCGGCA 60.754 57.895 30.85 15.30 0.00 5.69
5098 5336 2.947652 CCGAGCAATCACTGGAATGAAT 59.052 45.455 0.00 0.00 30.82 2.57
5189 5427 7.524717 ACAGTAAGTTTATTCTGCAAACCAT 57.475 32.000 0.00 0.00 36.71 3.55
5393 5632 5.310720 TCACGGATAATCTACCATCATCG 57.689 43.478 0.00 0.00 0.00 3.84
5446 5685 2.231964 GGCTTTGGTGCAATCAGATTCA 59.768 45.455 0.00 0.00 34.04 2.57
5460 5699 1.462616 TGAATCACCGATGGCTTTGG 58.537 50.000 5.14 5.14 34.63 3.28
5465 5704 1.303309 CCTCTTGAATCACCGATGGC 58.697 55.000 0.00 0.00 0.00 4.40
5470 5709 0.174845 TACGCCCTCTTGAATCACCG 59.825 55.000 0.00 0.00 0.00 4.94
5471 5710 1.480954 TCTACGCCCTCTTGAATCACC 59.519 52.381 0.00 0.00 0.00 4.02
5519 5758 3.740321 CCATGTCCGTTTTGGTTTGAATG 59.260 43.478 0.00 0.00 39.52 2.67
5541 5780 2.250188 GACATGTACGTTGGCATTTGC 58.750 47.619 0.00 0.00 41.14 3.68
5574 5813 2.303311 TGTCCCGACATACAATTGTCCA 59.697 45.455 15.85 0.00 42.46 4.02
5587 5826 2.509336 CCGCTGACATGTCCCGAC 60.509 66.667 27.41 13.54 0.00 4.79
5588 5827 2.678580 TCCGCTGACATGTCCCGA 60.679 61.111 27.41 14.49 0.00 5.14
5611 5854 1.378514 GGATGGCCCGCTTCTCAAA 60.379 57.895 0.00 0.00 0.00 2.69
5614 5857 1.152881 ATTGGATGGCCCGCTTCTC 60.153 57.895 0.00 0.00 37.93 2.87
5615 5858 1.152881 GATTGGATGGCCCGCTTCT 60.153 57.895 0.00 0.00 37.93 2.85
5616 5859 1.152881 AGATTGGATGGCCCGCTTC 60.153 57.895 0.00 0.00 37.93 3.86
5617 5860 1.454479 CAGATTGGATGGCCCGCTT 60.454 57.895 0.00 0.00 37.93 4.68
5618 5861 1.713005 ATCAGATTGGATGGCCCGCT 61.713 55.000 0.00 0.00 37.93 5.52
5619 5862 1.228367 ATCAGATTGGATGGCCCGC 60.228 57.895 0.00 0.00 37.93 6.13
5620 5863 1.521450 GCATCAGATTGGATGGCCCG 61.521 60.000 0.00 0.00 43.85 6.13
5621 5864 1.521450 CGCATCAGATTGGATGGCCC 61.521 60.000 0.00 0.00 43.85 5.80
5622 5865 1.954528 CGCATCAGATTGGATGGCC 59.045 57.895 0.00 0.00 43.85 5.36
5623 5866 1.285023 GCGCATCAGATTGGATGGC 59.715 57.895 0.30 3.80 43.85 4.40
5624 5867 0.820482 TGGCGCATCAGATTGGATGG 60.820 55.000 10.83 0.00 43.85 3.51
5625 5868 1.026584 TTGGCGCATCAGATTGGATG 58.973 50.000 10.83 0.00 45.89 3.51
5626 5869 1.766494 TTTGGCGCATCAGATTGGAT 58.234 45.000 10.83 0.00 0.00 3.41
5627 5870 1.766494 ATTTGGCGCATCAGATTGGA 58.234 45.000 10.83 0.00 0.00 3.53
5628 5871 2.880268 TCTATTTGGCGCATCAGATTGG 59.120 45.455 10.83 0.00 0.00 3.16
5629 5872 4.534168 CTTCTATTTGGCGCATCAGATTG 58.466 43.478 10.83 1.00 0.00 2.67
5630 5873 3.004106 GCTTCTATTTGGCGCATCAGATT 59.996 43.478 10.83 0.00 0.00 2.40
5631 5874 2.551459 GCTTCTATTTGGCGCATCAGAT 59.449 45.455 10.83 2.01 0.00 2.90
5632 5875 1.942657 GCTTCTATTTGGCGCATCAGA 59.057 47.619 10.83 0.58 0.00 3.27
5633 5876 1.333524 CGCTTCTATTTGGCGCATCAG 60.334 52.381 10.83 0.00 42.28 2.90
5634 5877 0.657312 CGCTTCTATTTGGCGCATCA 59.343 50.000 10.83 0.00 42.28 3.07
5635 5878 0.040958 CCGCTTCTATTTGGCGCATC 60.041 55.000 10.83 0.00 46.29 3.91
5636 5879 0.463654 TCCGCTTCTATTTGGCGCAT 60.464 50.000 10.83 0.00 46.29 4.73
5637 5880 1.078778 TCCGCTTCTATTTGGCGCA 60.079 52.632 10.83 0.00 46.29 6.09
5638 5881 1.352056 GTCCGCTTCTATTTGGCGC 59.648 57.895 0.00 0.00 46.29 6.53
5640 5883 2.032178 GTCATGTCCGCTTCTATTTGGC 59.968 50.000 0.00 0.00 0.00 4.52
5641 5884 3.270027 TGTCATGTCCGCTTCTATTTGG 58.730 45.455 0.00 0.00 0.00 3.28
5642 5885 5.490139 AATGTCATGTCCGCTTCTATTTG 57.510 39.130 0.00 0.00 0.00 2.32
5643 5886 6.150976 TGAAAATGTCATGTCCGCTTCTATTT 59.849 34.615 0.00 0.00 0.00 1.40
5644 5887 5.647658 TGAAAATGTCATGTCCGCTTCTATT 59.352 36.000 0.00 0.00 0.00 1.73
5645 5888 5.185454 TGAAAATGTCATGTCCGCTTCTAT 58.815 37.500 0.00 0.00 0.00 1.98
5646 5889 4.574892 TGAAAATGTCATGTCCGCTTCTA 58.425 39.130 0.00 0.00 0.00 2.10
5647 5890 3.411446 TGAAAATGTCATGTCCGCTTCT 58.589 40.909 0.00 0.00 0.00 2.85
5648 5891 3.829886 TGAAAATGTCATGTCCGCTTC 57.170 42.857 0.00 0.00 0.00 3.86
5649 5892 5.895636 TTATGAAAATGTCATGTCCGCTT 57.104 34.783 0.00 0.00 46.85 4.68
5650 5893 7.566760 TTATTATGAAAATGTCATGTCCGCT 57.433 32.000 0.00 0.00 46.85 5.52
5651 5894 8.801715 ATTTATTATGAAAATGTCATGTCCGC 57.198 30.769 0.00 0.00 46.85 5.54
5685 5928 5.241285 GGGTTGGTTAACTCCGATGTAAAAA 59.759 40.000 5.42 0.00 36.99 1.94
5686 5929 4.761227 GGGTTGGTTAACTCCGATGTAAAA 59.239 41.667 5.42 0.00 36.99 1.52
5687 5930 4.041938 AGGGTTGGTTAACTCCGATGTAAA 59.958 41.667 5.42 0.00 38.06 2.01
5688 5931 3.583966 AGGGTTGGTTAACTCCGATGTAA 59.416 43.478 5.42 0.00 38.06 2.41
5689 5932 3.175594 AGGGTTGGTTAACTCCGATGTA 58.824 45.455 5.42 0.00 38.06 2.29
5690 5933 1.982958 AGGGTTGGTTAACTCCGATGT 59.017 47.619 5.42 0.00 38.06 3.06
5691 5934 2.781681 AGGGTTGGTTAACTCCGATG 57.218 50.000 5.42 0.00 38.06 3.84
5692 5935 3.447950 ACTAGGGTTGGTTAACTCCGAT 58.552 45.455 5.42 2.21 38.06 4.18
5693 5936 2.827921 GACTAGGGTTGGTTAACTCCGA 59.172 50.000 5.42 0.00 38.06 4.55
5694 5937 2.564062 TGACTAGGGTTGGTTAACTCCG 59.436 50.000 5.42 0.00 38.06 4.63
5695 5938 4.628963 TTGACTAGGGTTGGTTAACTCC 57.371 45.455 5.42 6.09 38.06 3.85
5696 5939 6.473758 AGATTTGACTAGGGTTGGTTAACTC 58.526 40.000 5.42 0.00 37.56 3.01
5697 5940 6.449830 AGATTTGACTAGGGTTGGTTAACT 57.550 37.500 5.42 0.00 36.99 2.24
5698 5941 6.713450 TGAAGATTTGACTAGGGTTGGTTAAC 59.287 38.462 0.00 0.00 36.04 2.01
5699 5942 6.713450 GTGAAGATTTGACTAGGGTTGGTTAA 59.287 38.462 0.00 0.00 0.00 2.01
5700 5943 6.235664 GTGAAGATTTGACTAGGGTTGGTTA 58.764 40.000 0.00 0.00 0.00 2.85
5701 5944 5.070685 GTGAAGATTTGACTAGGGTTGGTT 58.929 41.667 0.00 0.00 0.00 3.67
5702 5945 4.506802 GGTGAAGATTTGACTAGGGTTGGT 60.507 45.833 0.00 0.00 0.00 3.67
5703 5946 4.010349 GGTGAAGATTTGACTAGGGTTGG 58.990 47.826 0.00 0.00 0.00 3.77
5704 5947 3.684788 CGGTGAAGATTTGACTAGGGTTG 59.315 47.826 0.00 0.00 0.00 3.77
5705 5948 3.326880 ACGGTGAAGATTTGACTAGGGTT 59.673 43.478 0.00 0.00 0.00 4.11
5706 5949 2.904434 ACGGTGAAGATTTGACTAGGGT 59.096 45.455 0.00 0.00 0.00 4.34
5707 5950 3.522553 GACGGTGAAGATTTGACTAGGG 58.477 50.000 0.00 0.00 0.00 3.53
5708 5951 3.195825 AGGACGGTGAAGATTTGACTAGG 59.804 47.826 0.00 0.00 0.00 3.02
5709 5952 4.457834 AGGACGGTGAAGATTTGACTAG 57.542 45.455 0.00 0.00 0.00 2.57
5710 5953 4.039973 ACAAGGACGGTGAAGATTTGACTA 59.960 41.667 0.00 0.00 0.00 2.59
5711 5954 3.181454 ACAAGGACGGTGAAGATTTGACT 60.181 43.478 0.00 0.00 0.00 3.41
5712 5955 3.139077 ACAAGGACGGTGAAGATTTGAC 58.861 45.455 0.00 0.00 0.00 3.18
5713 5956 3.071023 AGACAAGGACGGTGAAGATTTGA 59.929 43.478 0.00 0.00 0.00 2.69
5714 5957 3.403038 AGACAAGGACGGTGAAGATTTG 58.597 45.455 0.00 0.00 0.00 2.32
5715 5958 3.071023 TGAGACAAGGACGGTGAAGATTT 59.929 43.478 0.00 0.00 0.00 2.17
5716 5959 2.632996 TGAGACAAGGACGGTGAAGATT 59.367 45.455 0.00 0.00 0.00 2.40
5717 5960 2.028930 GTGAGACAAGGACGGTGAAGAT 60.029 50.000 0.00 0.00 0.00 2.40
5718 5961 1.340248 GTGAGACAAGGACGGTGAAGA 59.660 52.381 0.00 0.00 0.00 2.87
5719 5962 1.784525 GTGAGACAAGGACGGTGAAG 58.215 55.000 0.00 0.00 0.00 3.02
5720 5963 0.031585 CGTGAGACAAGGACGGTGAA 59.968 55.000 0.00 0.00 0.00 3.18
5721 5964 1.105167 ACGTGAGACAAGGACGGTGA 61.105 55.000 0.00 0.00 37.42 4.02
5722 5965 0.663568 GACGTGAGACAAGGACGGTG 60.664 60.000 0.00 0.00 37.42 4.94
5723 5966 1.658673 GACGTGAGACAAGGACGGT 59.341 57.895 0.00 0.00 37.42 4.83
5724 5967 1.080705 GGACGTGAGACAAGGACGG 60.081 63.158 0.00 0.00 37.42 4.79
5725 5968 1.135746 GTAGGACGTGAGACAAGGACG 60.136 57.143 0.00 0.00 39.03 4.79
5726 5969 2.161030 AGTAGGACGTGAGACAAGGAC 58.839 52.381 0.00 0.00 0.00 3.85
5727 5970 2.040012 AGAGTAGGACGTGAGACAAGGA 59.960 50.000 0.00 0.00 0.00 3.36
5728 5971 2.438411 AGAGTAGGACGTGAGACAAGG 58.562 52.381 0.00 0.00 0.00 3.61
5729 5972 3.502595 TGAAGAGTAGGACGTGAGACAAG 59.497 47.826 0.00 0.00 0.00 3.16
5730 5973 3.252701 GTGAAGAGTAGGACGTGAGACAA 59.747 47.826 0.00 0.00 0.00 3.18
5731 5974 2.812591 GTGAAGAGTAGGACGTGAGACA 59.187 50.000 0.00 0.00 0.00 3.41
5732 5975 2.162008 GGTGAAGAGTAGGACGTGAGAC 59.838 54.545 0.00 0.00 0.00 3.36
5733 5976 2.434428 GGTGAAGAGTAGGACGTGAGA 58.566 52.381 0.00 0.00 0.00 3.27
5734 5977 1.130749 CGGTGAAGAGTAGGACGTGAG 59.869 57.143 0.00 0.00 0.00 3.51
5735 5978 1.162698 CGGTGAAGAGTAGGACGTGA 58.837 55.000 0.00 0.00 0.00 4.35
5736 5979 0.170561 CCGGTGAAGAGTAGGACGTG 59.829 60.000 0.00 0.00 0.00 4.49
5737 5980 0.037303 TCCGGTGAAGAGTAGGACGT 59.963 55.000 0.00 0.00 0.00 4.34
5738 5981 1.171308 TTCCGGTGAAGAGTAGGACG 58.829 55.000 0.00 0.00 0.00 4.79
5750 5993 0.819582 ATACGTACCCACTTCCGGTG 59.180 55.000 0.00 0.00 44.96 4.94
5751 5994 0.819582 CATACGTACCCACTTCCGGT 59.180 55.000 0.00 0.00 37.40 5.28
5752 5995 0.819582 ACATACGTACCCACTTCCGG 59.180 55.000 0.00 0.00 0.00 5.14
5753 5996 1.203052 ACACATACGTACCCACTTCCG 59.797 52.381 0.00 0.00 0.00 4.30
5754 5997 2.417787 GGACACATACGTACCCACTTCC 60.418 54.545 0.00 0.00 0.00 3.46
5755 5998 2.417787 GGGACACATACGTACCCACTTC 60.418 54.545 12.20 0.00 39.40 3.01
5756 5999 1.551883 GGGACACATACGTACCCACTT 59.448 52.381 12.20 0.00 39.40 3.16
5757 6000 1.188863 GGGACACATACGTACCCACT 58.811 55.000 12.20 0.00 39.40 4.00
5758 6001 0.896923 TGGGACACATACGTACCCAC 59.103 55.000 15.09 0.00 42.37 4.61
5759 6002 3.377848 TGGGACACATACGTACCCA 57.622 52.632 15.09 15.09 43.90 4.51
5771 6014 1.899437 GAAGAGCGGGATGTGGGACA 61.899 60.000 0.00 0.00 0.00 4.02
5772 6015 1.153349 GAAGAGCGGGATGTGGGAC 60.153 63.158 0.00 0.00 0.00 4.46
5773 6016 0.982852 ATGAAGAGCGGGATGTGGGA 60.983 55.000 0.00 0.00 0.00 4.37
5774 6017 0.533755 GATGAAGAGCGGGATGTGGG 60.534 60.000 0.00 0.00 0.00 4.61
5775 6018 0.877649 CGATGAAGAGCGGGATGTGG 60.878 60.000 0.00 0.00 0.00 4.17
5776 6019 2.598045 CGATGAAGAGCGGGATGTG 58.402 57.895 0.00 0.00 0.00 3.21
5783 6026 1.002251 GGTAGACTCCGATGAAGAGCG 60.002 57.143 0.00 0.00 34.56 5.03
5784 6027 2.303175 AGGTAGACTCCGATGAAGAGC 58.697 52.381 0.00 0.00 34.56 4.09
5785 6028 4.023536 GCTAAGGTAGACTCCGATGAAGAG 60.024 50.000 0.00 0.00 37.39 2.85
5786 6029 3.884091 GCTAAGGTAGACTCCGATGAAGA 59.116 47.826 0.00 0.00 0.00 2.87
5787 6030 3.304123 CGCTAAGGTAGACTCCGATGAAG 60.304 52.174 0.00 0.00 0.00 3.02
5788 6031 2.617308 CGCTAAGGTAGACTCCGATGAA 59.383 50.000 0.00 0.00 0.00 2.57
5789 6032 2.219458 CGCTAAGGTAGACTCCGATGA 58.781 52.381 0.00 0.00 0.00 2.92
5790 6033 1.267261 CCGCTAAGGTAGACTCCGATG 59.733 57.143 0.00 0.00 34.51 3.84
5791 6034 1.606903 CCGCTAAGGTAGACTCCGAT 58.393 55.000 0.00 0.00 34.51 4.18
5792 6035 1.099879 GCCGCTAAGGTAGACTCCGA 61.100 60.000 0.00 0.00 43.70 4.55
5793 6036 1.359475 GCCGCTAAGGTAGACTCCG 59.641 63.158 0.00 0.00 43.70 4.63
5794 6037 1.041447 TGGCCGCTAAGGTAGACTCC 61.041 60.000 0.00 0.00 43.70 3.85
5795 6038 0.822164 TTGGCCGCTAAGGTAGACTC 59.178 55.000 0.00 0.00 43.70 3.36
5796 6039 0.535797 GTTGGCCGCTAAGGTAGACT 59.464 55.000 0.00 0.00 43.70 3.24
5797 6040 0.804933 CGTTGGCCGCTAAGGTAGAC 60.805 60.000 0.00 0.00 43.70 2.59
5798 6041 1.252904 ACGTTGGCCGCTAAGGTAGA 61.253 55.000 12.47 0.00 43.70 2.59
5799 6042 0.804933 GACGTTGGCCGCTAAGGTAG 60.805 60.000 13.87 0.00 43.70 3.18
5800 6043 1.216178 GACGTTGGCCGCTAAGGTA 59.784 57.895 13.87 0.00 43.70 3.08
5801 6044 2.047560 GACGTTGGCCGCTAAGGT 60.048 61.111 13.79 13.79 43.70 3.50
5802 6045 3.186047 CGACGTTGGCCGCTAAGG 61.186 66.667 7.53 7.53 41.42 2.69
5803 6046 3.849953 GCGACGTTGGCCGCTAAG 61.850 66.667 11.60 0.00 46.96 2.18
5808 6051 2.202690 TATCAGCGACGTTGGCCG 60.203 61.111 11.92 0.00 44.03 6.13
5809 6052 0.872021 CTCTATCAGCGACGTTGGCC 60.872 60.000 11.92 0.00 0.00 5.36
5810 6053 0.872021 CCTCTATCAGCGACGTTGGC 60.872 60.000 11.92 4.59 0.00 4.52
5811 6054 0.456221 ACCTCTATCAGCGACGTTGG 59.544 55.000 11.92 0.00 0.00 3.77
5812 6055 3.364062 CTTACCTCTATCAGCGACGTTG 58.636 50.000 5.21 5.21 0.00 4.10
5813 6056 2.358267 CCTTACCTCTATCAGCGACGTT 59.642 50.000 0.00 0.00 0.00 3.99
5814 6057 1.948145 CCTTACCTCTATCAGCGACGT 59.052 52.381 0.00 0.00 0.00 4.34
5815 6058 1.948145 ACCTTACCTCTATCAGCGACG 59.052 52.381 0.00 0.00 0.00 5.12
5816 6059 2.031857 CGACCTTACCTCTATCAGCGAC 60.032 54.545 0.00 0.00 0.00 5.19
5817 6060 2.219458 CGACCTTACCTCTATCAGCGA 58.781 52.381 0.00 0.00 0.00 4.93
5818 6061 1.335142 GCGACCTTACCTCTATCAGCG 60.335 57.143 0.00 0.00 0.00 5.18
5819 6062 1.000052 GGCGACCTTACCTCTATCAGC 60.000 57.143 0.00 0.00 0.00 4.26
5820 6063 1.267261 CGGCGACCTTACCTCTATCAG 59.733 57.143 0.00 0.00 0.00 2.90
5821 6064 1.134007 TCGGCGACCTTACCTCTATCA 60.134 52.381 4.99 0.00 0.00 2.15
5822 6065 1.602311 TCGGCGACCTTACCTCTATC 58.398 55.000 4.99 0.00 0.00 2.08
5823 6066 2.161030 GATCGGCGACCTTACCTCTAT 58.839 52.381 13.76 0.00 0.00 1.98
5824 6067 1.134007 TGATCGGCGACCTTACCTCTA 60.134 52.381 13.76 0.00 0.00 2.43
5825 6068 0.395311 TGATCGGCGACCTTACCTCT 60.395 55.000 13.76 0.00 0.00 3.69
5826 6069 0.458669 TTGATCGGCGACCTTACCTC 59.541 55.000 13.76 4.33 0.00 3.85
5827 6070 0.175073 GTTGATCGGCGACCTTACCT 59.825 55.000 13.76 0.00 0.00 3.08
5828 6071 0.808847 GGTTGATCGGCGACCTTACC 60.809 60.000 13.76 11.26 46.12 2.85
5829 6072 2.674296 GGTTGATCGGCGACCTTAC 58.326 57.895 13.76 5.01 46.12 2.34
5834 6077 0.591741 CGTCTAGGTTGATCGGCGAC 60.592 60.000 13.76 7.17 0.00 5.19
5835 6078 1.721664 CCGTCTAGGTTGATCGGCGA 61.722 60.000 13.87 13.87 35.01 5.54
5836 6079 1.299165 CCGTCTAGGTTGATCGGCG 60.299 63.158 0.00 0.00 35.01 6.46
5837 6080 4.732106 CCGTCTAGGTTGATCGGC 57.268 61.111 0.00 0.00 35.01 5.54
5846 6089 1.341531 CAATAGGCCAGACCGTCTAGG 59.658 57.143 5.01 6.68 46.52 3.02
5847 6090 1.341531 CCAATAGGCCAGACCGTCTAG 59.658 57.143 5.01 0.00 46.52 2.43
5848 6091 1.410004 CCAATAGGCCAGACCGTCTA 58.590 55.000 5.01 0.00 46.52 2.59
5849 6092 2.212327 CCAATAGGCCAGACCGTCT 58.788 57.895 5.01 0.00 46.52 4.18
5850 6093 4.857251 CCAATAGGCCAGACCGTC 57.143 61.111 5.01 0.00 46.52 4.79
5860 6103 2.033372 TCCATGTGCAATGCCAATAGG 58.967 47.619 1.53 5.09 38.23 2.57
5861 6104 2.691526 AGTCCATGTGCAATGCCAATAG 59.308 45.455 1.53 0.00 0.00 1.73
5862 6105 2.689471 GAGTCCATGTGCAATGCCAATA 59.311 45.455 1.53 0.00 0.00 1.90
5863 6106 1.479323 GAGTCCATGTGCAATGCCAAT 59.521 47.619 1.53 0.00 0.00 3.16
5864 6107 0.889994 GAGTCCATGTGCAATGCCAA 59.110 50.000 1.53 0.00 0.00 4.52
5865 6108 0.251253 TGAGTCCATGTGCAATGCCA 60.251 50.000 1.53 0.24 0.00 4.92
5866 6109 1.108776 ATGAGTCCATGTGCAATGCC 58.891 50.000 1.53 0.00 0.00 4.40
5867 6110 3.243301 CCTTATGAGTCCATGTGCAATGC 60.243 47.826 0.00 0.00 34.31 3.56
5868 6111 3.243301 GCCTTATGAGTCCATGTGCAATG 60.243 47.826 0.00 0.00 34.31 2.82
5869 6112 2.954318 GCCTTATGAGTCCATGTGCAAT 59.046 45.455 0.00 0.00 34.31 3.56
5870 6113 2.368439 GCCTTATGAGTCCATGTGCAA 58.632 47.619 0.00 0.00 34.31 4.08
5871 6114 1.743431 CGCCTTATGAGTCCATGTGCA 60.743 52.381 0.00 0.00 34.31 4.57
5872 6115 0.940126 CGCCTTATGAGTCCATGTGC 59.060 55.000 0.00 0.00 34.31 4.57
5873 6116 0.940126 GCGCCTTATGAGTCCATGTG 59.060 55.000 0.00 0.00 34.31 3.21
5874 6117 0.179045 GGCGCCTTATGAGTCCATGT 60.179 55.000 22.15 0.00 34.31 3.21
5875 6118 0.886490 GGGCGCCTTATGAGTCCATG 60.886 60.000 28.56 0.00 34.31 3.66
5876 6119 1.344953 TGGGCGCCTTATGAGTCCAT 61.345 55.000 28.56 0.00 36.81 3.41
5877 6120 1.992834 TGGGCGCCTTATGAGTCCA 60.993 57.895 28.56 9.50 0.00 4.02
5878 6121 1.523938 GTGGGCGCCTTATGAGTCC 60.524 63.158 28.56 6.48 0.00 3.85
5879 6122 0.811616 CAGTGGGCGCCTTATGAGTC 60.812 60.000 28.56 7.32 0.00 3.36
5880 6123 1.221840 CAGTGGGCGCCTTATGAGT 59.778 57.895 28.56 5.45 0.00 3.41
5881 6124 2.182842 GCAGTGGGCGCCTTATGAG 61.183 63.158 28.56 12.76 0.00 2.90
5882 6125 2.124736 GCAGTGGGCGCCTTATGA 60.125 61.111 28.56 2.17 0.00 2.15
5891 6134 2.439156 GGTGGATGAGCAGTGGGC 60.439 66.667 0.00 0.00 45.30 5.36
5892 6135 0.750546 CATGGTGGATGAGCAGTGGG 60.751 60.000 0.00 0.00 34.93 4.61
5893 6136 1.381928 GCATGGTGGATGAGCAGTGG 61.382 60.000 0.00 0.00 34.93 4.00
5894 6137 1.381928 GGCATGGTGGATGAGCAGTG 61.382 60.000 0.00 0.00 34.93 3.66
5895 6138 1.077212 GGCATGGTGGATGAGCAGT 60.077 57.895 0.00 0.00 34.93 4.40
5896 6139 1.826921 GGGCATGGTGGATGAGCAG 60.827 63.158 0.00 0.00 34.93 4.24
5897 6140 1.940242 ATGGGCATGGTGGATGAGCA 61.940 55.000 0.00 0.00 33.31 4.26
5898 6141 0.111061 TATGGGCATGGTGGATGAGC 59.889 55.000 0.00 0.00 33.31 4.26
5899 6142 2.893215 ATATGGGCATGGTGGATGAG 57.107 50.000 0.00 0.00 33.31 2.90
5900 6143 2.718062 AGAATATGGGCATGGTGGATGA 59.282 45.455 0.00 0.00 33.31 2.92
5901 6144 3.087031 GAGAATATGGGCATGGTGGATG 58.913 50.000 0.00 0.00 34.84 3.51
5902 6145 2.042162 GGAGAATATGGGCATGGTGGAT 59.958 50.000 0.00 0.00 0.00 3.41
5903 6146 1.425066 GGAGAATATGGGCATGGTGGA 59.575 52.381 0.00 0.00 0.00 4.02
5904 6147 1.883638 CGGAGAATATGGGCATGGTGG 60.884 57.143 0.00 0.00 0.00 4.61
5905 6148 1.202806 ACGGAGAATATGGGCATGGTG 60.203 52.381 0.00 0.00 0.00 4.17
5906 6149 1.140312 ACGGAGAATATGGGCATGGT 58.860 50.000 0.00 0.00 0.00 3.55
5907 6150 1.072173 TCACGGAGAATATGGGCATGG 59.928 52.381 0.00 0.00 0.00 3.66
5908 6151 2.224378 ACTCACGGAGAATATGGGCATG 60.224 50.000 7.76 0.00 33.32 4.06
5909 6152 2.050144 ACTCACGGAGAATATGGGCAT 58.950 47.619 7.76 0.00 33.32 4.40
5910 6153 1.496060 ACTCACGGAGAATATGGGCA 58.504 50.000 7.76 0.00 33.32 5.36
5911 6154 3.258372 TCATACTCACGGAGAATATGGGC 59.742 47.826 7.76 0.00 33.32 5.36
5912 6155 4.322049 GGTCATACTCACGGAGAATATGGG 60.322 50.000 7.76 0.00 33.32 4.00
5913 6156 4.616143 CGGTCATACTCACGGAGAATATGG 60.616 50.000 7.76 0.00 33.32 2.74
5914 6157 4.023107 ACGGTCATACTCACGGAGAATATG 60.023 45.833 7.76 5.34 33.32 1.78
5915 6158 4.023107 CACGGTCATACTCACGGAGAATAT 60.023 45.833 7.76 0.00 33.32 1.28
5916 6159 3.314357 CACGGTCATACTCACGGAGAATA 59.686 47.826 7.76 0.00 33.32 1.75
5917 6160 2.099263 CACGGTCATACTCACGGAGAAT 59.901 50.000 7.76 0.00 33.32 2.40
5918 6161 1.471287 CACGGTCATACTCACGGAGAA 59.529 52.381 7.76 0.00 33.32 2.87
5919 6162 1.092348 CACGGTCATACTCACGGAGA 58.908 55.000 7.76 0.00 33.32 3.71
5920 6163 1.092348 TCACGGTCATACTCACGGAG 58.908 55.000 0.03 0.03 35.52 4.63
5921 6164 1.404035 CATCACGGTCATACTCACGGA 59.596 52.381 0.00 0.00 0.00 4.69
5922 6165 1.536072 CCATCACGGTCATACTCACGG 60.536 57.143 0.00 0.00 0.00 4.94
5923 6166 1.840181 CCATCACGGTCATACTCACG 58.160 55.000 0.00 0.00 0.00 4.35
5924 6167 1.571919 GCCATCACGGTCATACTCAC 58.428 55.000 0.00 0.00 36.97 3.51
5925 6168 0.464036 GGCCATCACGGTCATACTCA 59.536 55.000 0.00 0.00 40.18 3.41
5926 6169 0.753262 AGGCCATCACGGTCATACTC 59.247 55.000 5.01 0.00 44.49 2.59
5927 6170 1.687123 GTAGGCCATCACGGTCATACT 59.313 52.381 5.01 0.00 44.49 2.12
5928 6171 1.687123 AGTAGGCCATCACGGTCATAC 59.313 52.381 5.01 0.00 44.49 2.39
5929 6172 2.082140 AGTAGGCCATCACGGTCATA 57.918 50.000 5.01 0.00 44.49 2.15
5930 6173 1.134401 CAAGTAGGCCATCACGGTCAT 60.134 52.381 5.01 0.00 44.49 3.06
5931 6174 0.249120 CAAGTAGGCCATCACGGTCA 59.751 55.000 5.01 0.00 44.49 4.02
5932 6175 0.249398 ACAAGTAGGCCATCACGGTC 59.751 55.000 5.01 0.00 41.10 4.79
5933 6176 0.690762 AACAAGTAGGCCATCACGGT 59.309 50.000 5.01 1.23 36.97 4.83
5934 6177 1.468520 CAAACAAGTAGGCCATCACGG 59.531 52.381 5.01 0.59 38.11 4.94
5935 6178 1.135689 GCAAACAAGTAGGCCATCACG 60.136 52.381 5.01 0.00 0.00 4.35
5936 6179 2.162681 AGCAAACAAGTAGGCCATCAC 58.837 47.619 5.01 0.00 0.00 3.06
5937 6180 2.557924 CAAGCAAACAAGTAGGCCATCA 59.442 45.455 5.01 0.00 0.00 3.07
5938 6181 2.672195 GCAAGCAAACAAGTAGGCCATC 60.672 50.000 5.01 0.00 0.00 3.51
5939 6182 1.273327 GCAAGCAAACAAGTAGGCCAT 59.727 47.619 5.01 0.00 0.00 4.40
5940 6183 0.673437 GCAAGCAAACAAGTAGGCCA 59.327 50.000 5.01 0.00 0.00 5.36
5941 6184 0.961753 AGCAAGCAAACAAGTAGGCC 59.038 50.000 0.00 0.00 0.00 5.19
5942 6185 2.223805 ACAAGCAAGCAAACAAGTAGGC 60.224 45.455 0.00 0.00 0.00 3.93
5943 6186 3.632189 GACAAGCAAGCAAACAAGTAGG 58.368 45.455 0.00 0.00 0.00 3.18
5944 6187 3.002246 TCGACAAGCAAGCAAACAAGTAG 59.998 43.478 0.00 0.00 0.00 2.57
5945 6188 2.939756 TCGACAAGCAAGCAAACAAGTA 59.060 40.909 0.00 0.00 0.00 2.24
5946 6189 1.742831 TCGACAAGCAAGCAAACAAGT 59.257 42.857 0.00 0.00 0.00 3.16
5947 6190 2.473530 TCGACAAGCAAGCAAACAAG 57.526 45.000 0.00 0.00 0.00 3.16
5948 6191 2.357323 TCATCGACAAGCAAGCAAACAA 59.643 40.909 0.00 0.00 0.00 2.83
5949 6192 1.946081 TCATCGACAAGCAAGCAAACA 59.054 42.857 0.00 0.00 0.00 2.83
5950 6193 2.686558 TCATCGACAAGCAAGCAAAC 57.313 45.000 0.00 0.00 0.00 2.93
5951 6194 3.076621 AGATCATCGACAAGCAAGCAAA 58.923 40.909 0.00 0.00 0.00 3.68
5952 6195 2.417586 CAGATCATCGACAAGCAAGCAA 59.582 45.455 0.00 0.00 0.00 3.91
5953 6196 2.004733 CAGATCATCGACAAGCAAGCA 58.995 47.619 0.00 0.00 0.00 3.91
5954 6197 2.030213 GTCAGATCATCGACAAGCAAGC 59.970 50.000 0.00 0.00 32.24 4.01
5955 6198 2.606725 GGTCAGATCATCGACAAGCAAG 59.393 50.000 10.49 0.00 33.66 4.01
5956 6199 2.234661 AGGTCAGATCATCGACAAGCAA 59.765 45.455 10.49 0.00 33.66 3.91
5957 6200 1.827344 AGGTCAGATCATCGACAAGCA 59.173 47.619 10.49 0.00 33.66 3.91
5958 6201 2.159184 TGAGGTCAGATCATCGACAAGC 60.159 50.000 10.49 0.00 33.66 4.01
5959 6202 3.130164 ACTGAGGTCAGATCATCGACAAG 59.870 47.826 13.99 7.71 46.59 3.16
5960 6203 3.092301 ACTGAGGTCAGATCATCGACAA 58.908 45.455 13.99 0.00 46.59 3.18
5961 6204 2.424956 CACTGAGGTCAGATCATCGACA 59.575 50.000 13.99 0.00 46.59 4.35
5962 6205 2.685388 TCACTGAGGTCAGATCATCGAC 59.315 50.000 13.99 0.00 46.59 4.20
5963 6206 2.948315 CTCACTGAGGTCAGATCATCGA 59.052 50.000 13.99 0.00 46.59 3.59
5964 6207 2.543445 GCTCACTGAGGTCAGATCATCG 60.543 54.545 13.99 0.00 46.59 3.84
5965 6208 2.224018 GGCTCACTGAGGTCAGATCATC 60.224 54.545 13.99 0.00 46.59 2.92
5966 6209 1.761784 GGCTCACTGAGGTCAGATCAT 59.238 52.381 13.99 0.00 46.59 2.45
5967 6210 1.189752 GGCTCACTGAGGTCAGATCA 58.810 55.000 13.99 0.00 46.59 2.92
5968 6211 0.102120 CGGCTCACTGAGGTCAGATC 59.898 60.000 13.99 0.00 46.59 2.75
5969 6212 1.326213 CCGGCTCACTGAGGTCAGAT 61.326 60.000 13.99 0.00 46.59 2.90
5970 6213 1.979155 CCGGCTCACTGAGGTCAGA 60.979 63.158 13.99 0.00 46.59 3.27
5972 6215 2.203640 ACCGGCTCACTGAGGTCA 60.204 61.111 0.00 0.00 29.76 4.02
5973 6216 2.100879 AACACCGGCTCACTGAGGTC 62.101 60.000 0.00 0.00 34.25 3.85
5974 6217 1.696097 AAACACCGGCTCACTGAGGT 61.696 55.000 0.00 0.00 37.49 3.85
5975 6218 0.951040 GAAACACCGGCTCACTGAGG 60.951 60.000 0.00 0.00 0.00 3.86
5976 6219 0.034059 AGAAACACCGGCTCACTGAG 59.966 55.000 0.00 1.21 0.00 3.35
5977 6220 0.033504 GAGAAACACCGGCTCACTGA 59.966 55.000 0.00 0.00 0.00 3.41
5978 6221 0.249868 TGAGAAACACCGGCTCACTG 60.250 55.000 0.00 0.00 34.02 3.66
5979 6222 0.687354 ATGAGAAACACCGGCTCACT 59.313 50.000 10.43 0.07 41.02 3.41
5980 6223 0.798776 CATGAGAAACACCGGCTCAC 59.201 55.000 10.43 0.00 41.02 3.51
5981 6224 0.684535 TCATGAGAAACACCGGCTCA 59.315 50.000 10.60 10.60 42.25 4.26
5982 6225 1.734465 CTTCATGAGAAACACCGGCTC 59.266 52.381 0.00 0.00 32.35 4.70
5983 6226 1.813513 CTTCATGAGAAACACCGGCT 58.186 50.000 0.00 0.00 32.35 5.52
5984 6227 0.169009 GCTTCATGAGAAACACCGGC 59.831 55.000 0.00 0.00 32.35 6.13
5985 6228 1.813513 AGCTTCATGAGAAACACCGG 58.186 50.000 0.00 0.00 32.35 5.28
5986 6229 3.589988 ACTAGCTTCATGAGAAACACCG 58.410 45.455 0.00 0.00 32.35 4.94
5987 6230 4.757149 ACAACTAGCTTCATGAGAAACACC 59.243 41.667 0.00 0.00 32.35 4.16
5988 6231 5.683859 CACAACTAGCTTCATGAGAAACAC 58.316 41.667 0.00 0.00 32.35 3.32
5989 6232 4.214119 GCACAACTAGCTTCATGAGAAACA 59.786 41.667 0.00 0.00 32.35 2.83
5990 6233 4.378874 GGCACAACTAGCTTCATGAGAAAC 60.379 45.833 0.00 0.00 32.35 2.78
5991 6234 3.753272 GGCACAACTAGCTTCATGAGAAA 59.247 43.478 0.00 0.00 32.35 2.52
5992 6235 3.008375 AGGCACAACTAGCTTCATGAGAA 59.992 43.478 0.00 0.00 0.00 2.87
5993 6236 2.568956 AGGCACAACTAGCTTCATGAGA 59.431 45.455 0.00 0.00 0.00 3.27
5994 6237 2.983229 AGGCACAACTAGCTTCATGAG 58.017 47.619 0.00 0.00 0.00 2.90
5995 6238 3.338249 GAAGGCACAACTAGCTTCATGA 58.662 45.455 0.00 0.00 0.00 3.07
5996 6239 2.094894 CGAAGGCACAACTAGCTTCATG 59.905 50.000 0.00 0.00 0.00 3.07
5997 6240 2.350522 CGAAGGCACAACTAGCTTCAT 58.649 47.619 0.00 0.00 0.00 2.57
5998 6241 1.795768 CGAAGGCACAACTAGCTTCA 58.204 50.000 0.00 0.00 0.00 3.02
5999 6242 0.444260 GCGAAGGCACAACTAGCTTC 59.556 55.000 0.00 0.00 39.62 3.86
6000 6243 2.544726 GCGAAGGCACAACTAGCTT 58.455 52.632 0.00 0.00 39.62 3.74
6001 6244 4.285851 GCGAAGGCACAACTAGCT 57.714 55.556 0.00 0.00 39.62 3.32
6017 6260 1.062587 GCACTACAACGTCATCATGGC 59.937 52.381 0.00 0.00 0.00 4.40
6018 6261 1.324435 CGCACTACAACGTCATCATGG 59.676 52.381 0.00 0.00 0.00 3.66
6019 6262 1.267038 GCGCACTACAACGTCATCATG 60.267 52.381 0.30 0.00 0.00 3.07
6020 6263 0.999406 GCGCACTACAACGTCATCAT 59.001 50.000 0.30 0.00 0.00 2.45
6021 6264 1.011968 GGCGCACTACAACGTCATCA 61.012 55.000 10.83 0.00 33.22 3.07
6022 6265 0.736325 AGGCGCACTACAACGTCATC 60.736 55.000 10.83 0.00 36.07 2.92
6023 6266 0.736325 GAGGCGCACTACAACGTCAT 60.736 55.000 10.83 0.00 36.07 3.06
6024 6267 1.372499 GAGGCGCACTACAACGTCA 60.372 57.895 10.83 0.00 36.07 4.35
6025 6268 2.092882 GGAGGCGCACTACAACGTC 61.093 63.158 10.83 0.00 0.00 4.34
6026 6269 2.048503 GGAGGCGCACTACAACGT 60.049 61.111 10.83 0.00 0.00 3.99
6027 6270 3.179265 CGGAGGCGCACTACAACG 61.179 66.667 10.83 0.00 0.00 4.10
6028 6271 3.488090 GCGGAGGCGCACTACAAC 61.488 66.667 10.83 0.00 34.62 3.32
6029 6272 3.997397 TGCGGAGGCGCACTACAA 61.997 61.111 10.83 0.00 44.10 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.