Multiple sequence alignment - TraesCS2A01G465000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G465000 chr2A 100.000 3506 0 0 1 3506 710095491 710098996 0.000000e+00 6475
1 TraesCS2A01G465000 chr2A 90.648 2438 198 19 171 2596 709858411 709860830 0.000000e+00 3212
2 TraesCS2A01G465000 chr2A 83.293 3304 451 57 1 3256 710038638 710041888 0.000000e+00 2950
3 TraesCS2A01G465000 chr2D 85.835 2612 310 33 1 2596 571197627 571200194 0.000000e+00 2719
4 TraesCS2A01G465000 chr2D 85.326 2610 359 16 1 2596 571211424 571214023 0.000000e+00 2676
5 TraesCS2A01G465000 chr2D 83.257 2616 409 20 2 2596 571529487 571532094 0.000000e+00 2377
6 TraesCS2A01G465000 chr2D 85.346 1085 138 13 1 1071 571445690 571446767 0.000000e+00 1103
7 TraesCS2A01G465000 chr2D 79.343 731 109 28 2635 3344 571214097 571214806 3.170000e-130 475
8 TraesCS2A01G465000 chr2B 85.807 2621 302 38 1 2596 683045416 683047991 0.000000e+00 2715
9 TraesCS2A01G465000 chr2B 85.567 2612 345 17 1 2596 683070117 683072712 0.000000e+00 2706
10 TraesCS2A01G465000 chr2B 86.805 1402 166 10 1 1386 683130673 683132071 0.000000e+00 1546
11 TraesCS2A01G465000 chr2B 84.852 1558 209 23 1056 2600 683057571 683059114 0.000000e+00 1544
12 TraesCS2A01G465000 chr2B 85.589 1478 203 8 1107 2580 683132069 683133540 0.000000e+00 1541
13 TraesCS2A01G465000 chr2B 80.978 1840 311 27 778 2596 794691227 794689406 0.000000e+00 1423
14 TraesCS2A01G465000 chr2B 84.871 1084 140 13 1 1071 683162006 683163078 0.000000e+00 1072
15 TraesCS2A01G465000 chr2B 80.296 406 59 12 2614 3004 683072769 683073168 1.590000e-73 287
16 TraesCS2A01G465000 chr6A 85.783 1041 132 10 1 1028 617079168 617080205 0.000000e+00 1088
17 TraesCS2A01G465000 chrUn 85.685 971 118 14 5 962 307300879 307301841 0.000000e+00 1003


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G465000 chr2A 710095491 710098996 3505 False 6475.0 6475 100.0000 1 3506 1 chr2A.!!$F3 3505
1 TraesCS2A01G465000 chr2A 709858411 709860830 2419 False 3212.0 3212 90.6480 171 2596 1 chr2A.!!$F1 2425
2 TraesCS2A01G465000 chr2A 710038638 710041888 3250 False 2950.0 2950 83.2930 1 3256 1 chr2A.!!$F2 3255
3 TraesCS2A01G465000 chr2D 571197627 571200194 2567 False 2719.0 2719 85.8350 1 2596 1 chr2D.!!$F1 2595
4 TraesCS2A01G465000 chr2D 571529487 571532094 2607 False 2377.0 2377 83.2570 2 2596 1 chr2D.!!$F3 2594
5 TraesCS2A01G465000 chr2D 571211424 571214806 3382 False 1575.5 2676 82.3345 1 3344 2 chr2D.!!$F4 3343
6 TraesCS2A01G465000 chr2D 571445690 571446767 1077 False 1103.0 1103 85.3460 1 1071 1 chr2D.!!$F2 1070
7 TraesCS2A01G465000 chr2B 683045416 683047991 2575 False 2715.0 2715 85.8070 1 2596 1 chr2B.!!$F1 2595
8 TraesCS2A01G465000 chr2B 683057571 683059114 1543 False 1544.0 1544 84.8520 1056 2600 1 chr2B.!!$F2 1544
9 TraesCS2A01G465000 chr2B 683130673 683133540 2867 False 1543.5 1546 86.1970 1 2580 2 chr2B.!!$F5 2579
10 TraesCS2A01G465000 chr2B 683070117 683073168 3051 False 1496.5 2706 82.9315 1 3004 2 chr2B.!!$F4 3003
11 TraesCS2A01G465000 chr2B 794689406 794691227 1821 True 1423.0 1423 80.9780 778 2596 1 chr2B.!!$R1 1818
12 TraesCS2A01G465000 chr2B 683162006 683163078 1072 False 1072.0 1072 84.8710 1 1071 1 chr2B.!!$F3 1070
13 TraesCS2A01G465000 chr6A 617079168 617080205 1037 False 1088.0 1088 85.7830 1 1028 1 chr6A.!!$F1 1027
14 TraesCS2A01G465000 chrUn 307300879 307301841 962 False 1003.0 1003 85.6850 5 962 1 chrUn.!!$F1 957

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
561 574 2.874086 CTGCATGTTGTCAGAGTGTCAA 59.126 45.455 0.0 0.0 32.26 3.18 F
1351 1659 0.401395 TCTGGAGTTCTGTGGGGGTT 60.401 55.000 0.0 0.0 0.00 4.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1520 1831 0.035915 GCCTTGAGGAGTGAAGGACC 60.036 60.0 0.06 0.0 41.26 4.46 R
2983 3364 0.037303 TCAGAAAAGCAGAGGGGCTG 59.963 55.0 0.00 0.0 45.07 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 4.877773 AGATACTTCATCTGGAGGAGTGT 58.122 43.478 0.00 0.00 42.69 3.55
107 108 6.064717 GTGTAGGGAATGGCAAATTCTATCT 58.935 40.000 10.23 8.47 0.00 1.98
156 160 3.066342 GCTGACATTGATCAGGATGTTGG 59.934 47.826 13.04 10.27 45.35 3.77
561 574 2.874086 CTGCATGTTGTCAGAGTGTCAA 59.126 45.455 0.00 0.00 32.26 3.18
945 967 8.915057 TGATCTCTCTTTCAAGTGAATCTTTT 57.085 30.769 0.00 0.00 33.63 2.27
1211 1236 9.206690 TCTATCAATCAGTCAACCTAGAGAAAT 57.793 33.333 0.00 0.00 0.00 2.17
1351 1659 0.401395 TCTGGAGTTCTGTGGGGGTT 60.401 55.000 0.00 0.00 0.00 4.11
1386 1694 3.439895 GGATTCACCTCTCTTACGGAC 57.560 52.381 0.00 0.00 35.41 4.79
1477 1788 3.610911 GAAGTTGGATTACTCCCACCAG 58.389 50.000 0.20 0.00 41.29 4.00
1489 1800 2.031120 TCCCACCAGCACTTGAAAAAG 58.969 47.619 0.00 0.00 0.00 2.27
1508 1819 7.234782 TGAAAAAGTTACTATCAGTCCTCTCCA 59.765 37.037 0.00 0.00 0.00 3.86
1514 1825 5.930837 ACTATCAGTCCTCTCCAAGAAAG 57.069 43.478 0.00 0.00 0.00 2.62
1520 1831 1.023513 CCTCTCCAAGAAAGCCTGCG 61.024 60.000 0.00 0.00 0.00 5.18
1555 1866 0.695347 AGGCCTTCTCCACCTCAAAG 59.305 55.000 0.00 0.00 0.00 2.77
1566 1877 3.511934 TCCACCTCAAAGAGCTAAGTCTC 59.488 47.826 0.00 0.00 0.00 3.36
1611 1922 2.691409 TACAGCTGCATTCCTGTACC 57.309 50.000 15.27 0.00 42.02 3.34
1612 1923 0.987294 ACAGCTGCATTCCTGTACCT 59.013 50.000 15.27 0.00 40.30 3.08
1619 1930 2.292918 TGCATTCCTGTACCTCCCTAGT 60.293 50.000 0.00 0.00 0.00 2.57
1665 1976 2.294078 GCTGGCTGTACTGGAGGGT 61.294 63.158 1.65 0.00 0.00 4.34
1791 2102 2.125350 CAGCTGCTTCCTCCGTCC 60.125 66.667 0.00 0.00 0.00 4.79
1879 2190 3.814842 TGCCATCACCAAATTAGCGATAG 59.185 43.478 0.00 0.00 0.00 2.08
1899 2210 2.380084 GGCGTAGTCCAGAATTGACA 57.620 50.000 0.00 0.00 35.15 3.58
1929 2240 2.125147 GGATGCTGCACGGCACTA 60.125 61.111 3.57 0.00 45.36 2.74
1948 2259 6.983890 GGCACTAAAAGAGTTGGAAATTGAAA 59.016 34.615 0.00 0.00 35.64 2.69
1950 2261 8.878769 GCACTAAAAGAGTTGGAAATTGAAAAA 58.121 29.630 0.00 0.00 35.64 1.94
1959 2270 5.193663 TGGAAATTGAAAAATGCGACTCA 57.806 34.783 0.00 0.00 0.00 3.41
1962 2273 5.117592 GGAAATTGAAAAATGCGACTCACTG 59.882 40.000 0.00 0.00 0.00 3.66
1964 2275 2.844946 TGAAAAATGCGACTCACTGGA 58.155 42.857 0.00 0.00 0.00 3.86
1983 2294 2.040442 TCCATCGAGGGCCTCCAA 59.960 61.111 27.36 16.34 38.24 3.53
2000 2311 5.560724 CCTCCAATTCTGTAGAAACCTGAA 58.439 41.667 0.00 0.00 37.61 3.02
2003 2314 7.829211 CCTCCAATTCTGTAGAAACCTGAAATA 59.171 37.037 0.00 0.00 37.61 1.40
2009 2320 6.936279 TCTGTAGAAACCTGAAATACCTGAG 58.064 40.000 0.00 0.00 0.00 3.35
2106 2418 1.611936 GGACTGGAAACTCTTGAGGCC 60.612 57.143 0.00 0.00 0.00 5.19
2114 2429 1.079543 CTCTTGAGGCCAGTGACGG 60.080 63.158 5.01 0.00 0.00 4.79
2115 2430 2.046892 CTTGAGGCCAGTGACGGG 60.047 66.667 5.01 0.00 0.00 5.28
2131 2446 1.481056 CGGGTCTGTCCTTTCCAGGT 61.481 60.000 0.00 0.00 41.69 4.00
2133 2448 1.353091 GGTCTGTCCTTTCCAGGTCT 58.647 55.000 0.00 0.00 41.69 3.85
2158 2473 3.593096 TGCAAACAGCTCACATCTCTAG 58.407 45.455 0.00 0.00 45.94 2.43
2162 2477 3.380471 ACAGCTCACATCTCTAGGACT 57.620 47.619 0.00 0.00 0.00 3.85
2183 2498 1.133407 CCTACAGTTCGGCTCTGAGAC 59.867 57.143 9.28 4.20 36.81 3.36
2191 2506 3.006112 TCGGCTCTGAGACTAGTGAAT 57.994 47.619 9.28 0.00 0.00 2.57
2192 2507 2.685388 TCGGCTCTGAGACTAGTGAATG 59.315 50.000 9.28 0.00 0.00 2.67
2193 2508 2.223688 CGGCTCTGAGACTAGTGAATGG 60.224 54.545 9.28 0.00 0.00 3.16
2194 2509 3.027412 GGCTCTGAGACTAGTGAATGGA 58.973 50.000 9.28 0.00 0.00 3.41
2195 2510 3.068024 GGCTCTGAGACTAGTGAATGGAG 59.932 52.174 9.28 2.81 0.00 3.86
2265 2580 2.169561 GCTTCTAACCTCCCTCCAAGAG 59.830 54.545 0.00 0.00 0.00 2.85
2285 2600 1.745087 GCTTCAATTTCGGAGATGCCA 59.255 47.619 0.00 0.00 35.04 4.92
2310 2625 4.090761 TCTCTTGTCACTTCCTGCAAAT 57.909 40.909 0.00 0.00 0.00 2.32
2314 2629 5.620206 TCTTGTCACTTCCTGCAAATCTTA 58.380 37.500 0.00 0.00 0.00 2.10
2409 2724 4.277476 TCCCAACTTCTCTCAGATCTCTC 58.723 47.826 0.00 0.00 0.00 3.20
2421 2736 9.337396 TCTCTCAGATCTCTCAAGTTATTCTAC 57.663 37.037 0.00 0.00 0.00 2.59
2424 2739 8.815565 TCAGATCTCTCAAGTTATTCTACTGT 57.184 34.615 0.00 0.00 0.00 3.55
2438 2753 3.811083 TCTACTGTAGTGAGGAGCTAGC 58.189 50.000 6.62 6.62 0.00 3.42
2440 2755 0.665835 CTGTAGTGAGGAGCTAGCCG 59.334 60.000 12.13 0.00 0.00 5.52
2463 2778 3.005578 TGCAATGCAGAATTGTAGCAACA 59.994 39.130 2.72 2.16 46.37 3.33
2478 2794 2.079925 GCAACAGAGAAGCTAAGGGTG 58.920 52.381 0.00 0.00 0.00 4.61
2536 2853 8.015185 TGTGTCTACTTCTAAGGTACACTTTT 57.985 34.615 17.62 0.00 40.64 2.27
2575 2892 9.547753 CTACATAATTAGTTTACATGCTCACCT 57.452 33.333 0.00 0.00 0.00 4.00
2604 2970 1.361793 ATGCAATTCATTTGTGCGCC 58.638 45.000 4.18 0.00 41.27 6.53
2636 3002 1.210870 CACATTTGTGCAAGTGCCAC 58.789 50.000 7.23 0.00 39.39 5.01
2671 3042 0.970427 TCCACGAGCTACCTGCATGA 60.970 55.000 0.00 0.00 45.94 3.07
2689 3060 1.303309 GATGGATGGACGCAGGAAAG 58.697 55.000 0.00 0.00 0.00 2.62
2694 3065 2.288666 GATGGACGCAGGAAAGCATAA 58.711 47.619 0.00 0.00 0.00 1.90
2696 3067 1.017387 GGACGCAGGAAAGCATAAGG 58.983 55.000 0.00 0.00 0.00 2.69
2697 3068 1.017387 GACGCAGGAAAGCATAAGGG 58.983 55.000 0.00 0.00 0.00 3.95
2698 3069 1.032114 ACGCAGGAAAGCATAAGGGC 61.032 55.000 0.00 0.00 0.00 5.19
2706 3077 2.309136 AAGCATAAGGGCAAAGTGGT 57.691 45.000 0.00 0.00 35.83 4.16
2712 3083 4.589908 CATAAGGGCAAAGTGGTAAGTCT 58.410 43.478 0.00 0.00 0.00 3.24
2742 3113 3.979501 ATCAGGGGCATTATCACCTTT 57.020 42.857 0.00 0.00 0.00 3.11
2743 3114 3.297134 TCAGGGGCATTATCACCTTTC 57.703 47.619 0.00 0.00 0.00 2.62
2744 3115 2.580322 TCAGGGGCATTATCACCTTTCA 59.420 45.455 0.00 0.00 0.00 2.69
2748 3119 3.372025 GGGGCATTATCACCTTTCACTCT 60.372 47.826 0.00 0.00 0.00 3.24
2756 3127 8.571336 CATTATCACCTTTCACTCTTTCTTGTT 58.429 33.333 0.00 0.00 0.00 2.83
2757 3128 8.519799 TTATCACCTTTCACTCTTTCTTGTTT 57.480 30.769 0.00 0.00 0.00 2.83
2777 3148 1.902508 TCTCTTCTAGTTGGTGGCTGG 59.097 52.381 0.00 0.00 0.00 4.85
2793 3164 0.319383 CTGGCCGTGAGCTATGCTAG 60.319 60.000 0.00 0.00 39.88 3.42
2798 3169 4.730187 GCCGTGAGCTATGCTAGAGCAA 62.730 54.545 8.54 0.00 46.80 3.91
2809 3180 2.924421 GCTAGAGCAAAGCCTTACCAT 58.076 47.619 0.00 0.00 41.59 3.55
2810 3181 4.073293 GCTAGAGCAAAGCCTTACCATA 57.927 45.455 0.00 0.00 41.59 2.74
2813 3184 3.878778 AGAGCAAAGCCTTACCATAGTG 58.121 45.455 0.00 0.00 0.00 2.74
2816 3187 2.159379 GCAAAGCCTTACCATAGTGTGC 60.159 50.000 0.00 0.00 0.00 4.57
2818 3189 2.698855 AGCCTTACCATAGTGTGCTG 57.301 50.000 0.00 0.00 0.00 4.41
2821 3192 3.081804 GCCTTACCATAGTGTGCTGTTT 58.918 45.455 0.00 0.00 0.00 2.83
2822 3193 3.506067 GCCTTACCATAGTGTGCTGTTTT 59.494 43.478 0.00 0.00 0.00 2.43
2823 3194 4.615912 GCCTTACCATAGTGTGCTGTTTTG 60.616 45.833 0.00 0.00 0.00 2.44
2824 3195 4.082787 CCTTACCATAGTGTGCTGTTTTGG 60.083 45.833 0.00 0.00 0.00 3.28
2825 3196 2.238521 ACCATAGTGTGCTGTTTTGGG 58.761 47.619 0.00 0.00 0.00 4.12
2827 3198 2.030007 CCATAGTGTGCTGTTTTGGGTG 60.030 50.000 0.00 0.00 0.00 4.61
2830 3201 2.387757 AGTGTGCTGTTTTGGGTGATT 58.612 42.857 0.00 0.00 0.00 2.57
2832 3203 2.865551 GTGTGCTGTTTTGGGTGATTTG 59.134 45.455 0.00 0.00 0.00 2.32
2846 3224 7.552050 TGGGTGATTTGTTTTTATCCTGATT 57.448 32.000 0.00 0.00 0.00 2.57
2849 3227 8.749354 GGGTGATTTGTTTTTATCCTGATTAGT 58.251 33.333 0.00 0.00 0.00 2.24
2857 3235 9.793259 TGTTTTTATCCTGATTAGTTTCTCAGT 57.207 29.630 0.00 0.00 37.73 3.41
2860 3238 4.207891 TCCTGATTAGTTTCTCAGTGGC 57.792 45.455 0.00 0.00 37.73 5.01
2861 3239 3.840666 TCCTGATTAGTTTCTCAGTGGCT 59.159 43.478 0.00 0.00 37.73 4.75
2862 3240 4.081420 TCCTGATTAGTTTCTCAGTGGCTC 60.081 45.833 0.00 0.00 37.73 4.70
2863 3241 4.323028 CCTGATTAGTTTCTCAGTGGCTCA 60.323 45.833 0.00 0.00 37.73 4.26
2864 3242 4.825422 TGATTAGTTTCTCAGTGGCTCAG 58.175 43.478 0.00 0.00 0.00 3.35
2865 3243 3.685139 TTAGTTTCTCAGTGGCTCAGG 57.315 47.619 0.00 0.00 0.00 3.86
2866 3244 0.689623 AGTTTCTCAGTGGCTCAGGG 59.310 55.000 0.00 0.00 0.00 4.45
2867 3245 0.687354 GTTTCTCAGTGGCTCAGGGA 59.313 55.000 0.00 0.00 0.00 4.20
2868 3246 1.280421 GTTTCTCAGTGGCTCAGGGAT 59.720 52.381 0.00 0.00 0.00 3.85
2869 3247 0.907486 TTCTCAGTGGCTCAGGGATG 59.093 55.000 0.00 0.00 0.00 3.51
2870 3248 0.252421 TCTCAGTGGCTCAGGGATGT 60.252 55.000 0.00 0.00 0.00 3.06
2871 3249 1.007118 TCTCAGTGGCTCAGGGATGTA 59.993 52.381 0.00 0.00 0.00 2.29
2872 3250 1.411977 CTCAGTGGCTCAGGGATGTAG 59.588 57.143 0.00 0.00 0.00 2.74
2873 3251 1.198713 CAGTGGCTCAGGGATGTAGT 58.801 55.000 0.00 0.00 0.00 2.73
2880 3261 3.142174 GCTCAGGGATGTAGTATTTGGC 58.858 50.000 0.00 0.00 0.00 4.52
2890 3271 9.174166 GGGATGTAGTATTTGGCGATATTATTT 57.826 33.333 0.00 0.00 0.00 1.40
2898 3279 6.539649 TTTGGCGATATTATTTCTTCTCGG 57.460 37.500 0.00 0.00 0.00 4.63
2931 3312 9.170734 TCTGATTAAGTGATGAAAAGATTCCAG 57.829 33.333 0.00 0.00 34.49 3.86
2933 3314 9.958180 TGATTAAGTGATGAAAAGATTCCAGTA 57.042 29.630 0.00 0.00 34.49 2.74
2954 3335 8.665685 CCAGTATGTTTTCTGGTACTTAATCAC 58.334 37.037 3.38 0.00 44.19 3.06
2975 3356 2.224378 CGCATCCCATCTTGTCCAGTAT 60.224 50.000 0.00 0.00 0.00 2.12
2983 3364 7.054124 TCCCATCTTGTCCAGTATTGTTAATC 58.946 38.462 0.00 0.00 0.00 1.75
2985 3366 7.012704 CCCATCTTGTCCAGTATTGTTAATCAG 59.987 40.741 0.00 0.00 0.00 2.90
2986 3367 6.985188 TCTTGTCCAGTATTGTTAATCAGC 57.015 37.500 0.00 0.00 0.00 4.26
2987 3368 5.880332 TCTTGTCCAGTATTGTTAATCAGCC 59.120 40.000 0.00 0.00 0.00 4.85
2991 3372 4.137543 CCAGTATTGTTAATCAGCCCCTC 58.862 47.826 0.00 0.00 0.00 4.30
3004 3386 1.064832 AGCCCCTCTGCTTTTCTGATC 60.065 52.381 0.00 0.00 38.85 2.92
3006 3388 2.881403 GCCCCTCTGCTTTTCTGATCAA 60.881 50.000 0.00 0.00 0.00 2.57
3014 3396 7.148120 CCTCTGCTTTTCTGATCAACACATATT 60.148 37.037 0.00 0.00 0.00 1.28
3017 3399 9.282247 CTGCTTTTCTGATCAACACATATTAAC 57.718 33.333 0.00 0.00 0.00 2.01
3025 3407 7.905126 TGATCAACACATATTAACGCTGTTAG 58.095 34.615 0.00 0.00 0.00 2.34
3029 3411 7.222031 TCAACACATATTAACGCTGTTAGCTAG 59.778 37.037 0.00 0.00 39.60 3.42
3030 3412 5.983720 ACACATATTAACGCTGTTAGCTAGG 59.016 40.000 0.00 0.00 39.60 3.02
3031 3413 4.989168 ACATATTAACGCTGTTAGCTAGGC 59.011 41.667 0.00 0.00 39.60 3.93
3032 3414 3.821421 ATTAACGCTGTTAGCTAGGCT 57.179 42.857 11.62 0.00 39.60 4.58
3033 3415 2.865343 TAACGCTGTTAGCTAGGCTC 57.135 50.000 0.00 0.00 39.60 4.70
3034 3416 1.187087 AACGCTGTTAGCTAGGCTCT 58.813 50.000 0.00 0.00 39.60 4.09
3035 3417 0.741915 ACGCTGTTAGCTAGGCTCTC 59.258 55.000 0.00 0.00 39.60 3.20
3036 3418 0.031449 CGCTGTTAGCTAGGCTCTCC 59.969 60.000 0.00 0.00 39.60 3.71
3041 3423 2.512056 TGTTAGCTAGGCTCTCCTCTCT 59.488 50.000 0.00 0.00 43.06 3.10
3059 3441 5.123820 CCTCTCTTGCATGGTTCGATAAAAA 59.876 40.000 0.00 0.00 0.00 1.94
3090 3477 3.332034 ACTAGAAACACCGTAATGCACC 58.668 45.455 0.00 0.00 0.00 5.01
3095 3482 2.192664 ACACCGTAATGCACCAATGA 57.807 45.000 0.00 0.00 0.00 2.57
3104 3491 1.089112 TGCACCAATGATCTTGCTCG 58.911 50.000 0.00 0.00 35.91 5.03
3107 3494 1.089920 ACCAATGATCTTGCTCGCAC 58.910 50.000 0.00 0.00 0.00 5.34
3111 3498 2.907910 ATGATCTTGCTCGCACAAAC 57.092 45.000 0.00 0.00 0.00 2.93
3112 3499 1.592064 TGATCTTGCTCGCACAAACA 58.408 45.000 0.00 0.00 0.00 2.83
3122 3509 4.858140 TGCTCGCACAAACAATTTATCATG 59.142 37.500 0.00 0.00 0.00 3.07
3126 3513 4.567558 CGCACAAACAATTTATCATGCCAT 59.432 37.500 0.00 0.00 0.00 4.40
3129 3516 5.524646 CACAAACAATTTATCATGCCATCCC 59.475 40.000 0.00 0.00 0.00 3.85
3138 3525 0.822532 CATGCCATCCCTTCCTCTGC 60.823 60.000 0.00 0.00 0.00 4.26
3140 3527 1.153005 GCCATCCCTTCCTCTGCTG 60.153 63.158 0.00 0.00 0.00 4.41
3141 3528 1.919600 GCCATCCCTTCCTCTGCTGT 61.920 60.000 0.00 0.00 0.00 4.40
3145 3532 1.673665 CCCTTCCTCTGCTGTGCAC 60.674 63.158 10.75 10.75 33.79 4.57
3149 3536 2.355513 CCTTCCTCTGCTGTGCACTAAT 60.356 50.000 19.41 0.00 33.79 1.73
3162 3549 6.095432 TGTGCACTAATTTGGCTTGTATTT 57.905 33.333 19.41 0.00 0.00 1.40
3250 3643 7.485418 ACTAGTTACTGTATCATCTGTCTCG 57.515 40.000 0.00 0.00 0.00 4.04
3256 3649 3.969899 TGTATCATCTGTCTCGTGATGC 58.030 45.455 0.00 0.00 39.69 3.91
3257 3650 3.381272 TGTATCATCTGTCTCGTGATGCA 59.619 43.478 0.00 0.00 40.83 3.96
3258 3651 2.573941 TCATCTGTCTCGTGATGCAG 57.426 50.000 0.00 0.00 39.69 4.41
3263 3656 1.388093 CTGTCTCGTGATGCAGTTTCG 59.612 52.381 0.00 0.00 0.00 3.46
3270 3663 1.264020 GTGATGCAGTTTCGCTGTGAA 59.736 47.619 0.00 0.00 46.64 3.18
3281 3674 1.879380 TCGCTGTGAAAAATGGACAGG 59.121 47.619 0.00 0.00 38.04 4.00
3282 3675 1.666888 CGCTGTGAAAAATGGACAGGC 60.667 52.381 0.00 0.00 38.04 4.85
3283 3676 1.340889 GCTGTGAAAAATGGACAGGCA 59.659 47.619 0.00 0.00 38.04 4.75
3284 3677 2.608752 GCTGTGAAAAATGGACAGGCAG 60.609 50.000 0.00 0.00 38.04 4.85
3286 3679 3.030291 TGTGAAAAATGGACAGGCAGTT 58.970 40.909 0.00 0.00 0.00 3.16
3287 3680 4.211125 TGTGAAAAATGGACAGGCAGTTA 58.789 39.130 0.00 0.00 0.00 2.24
3288 3681 4.278170 TGTGAAAAATGGACAGGCAGTTAG 59.722 41.667 0.00 0.00 0.00 2.34
3305 3698 7.605410 GCAGTTAGCAATAGGTTTGTTACTA 57.395 36.000 0.00 0.00 44.79 1.82
3331 3724 8.422577 AAGTATTCTTATTTTGCTCCAGGTTT 57.577 30.769 0.00 0.00 31.46 3.27
3332 3725 7.830739 AGTATTCTTATTTTGCTCCAGGTTTG 58.169 34.615 0.00 0.00 0.00 2.93
3344 3737 6.065374 TGCTCCAGGTTTGTTATTCAGTAAA 58.935 36.000 0.00 0.00 0.00 2.01
3345 3738 6.547880 TGCTCCAGGTTTGTTATTCAGTAAAA 59.452 34.615 0.00 0.00 0.00 1.52
3346 3739 6.861572 GCTCCAGGTTTGTTATTCAGTAAAAC 59.138 38.462 0.00 0.00 0.00 2.43
3347 3740 7.279750 TCCAGGTTTGTTATTCAGTAAAACC 57.720 36.000 7.39 7.39 35.06 3.27
3348 3741 6.834451 TCCAGGTTTGTTATTCAGTAAAACCA 59.166 34.615 15.71 0.00 36.36 3.67
3349 3742 6.921307 CCAGGTTTGTTATTCAGTAAAACCAC 59.079 38.462 15.71 0.00 36.36 4.16
3350 3743 7.416890 CCAGGTTTGTTATTCAGTAAAACCACA 60.417 37.037 15.71 0.00 36.36 4.17
3351 3744 7.434013 CAGGTTTGTTATTCAGTAAAACCACAC 59.566 37.037 15.71 0.00 36.36 3.82
3352 3745 7.122948 AGGTTTGTTATTCAGTAAAACCACACA 59.877 33.333 15.71 0.00 36.36 3.72
3353 3746 7.434013 GGTTTGTTATTCAGTAAAACCACACAG 59.566 37.037 10.03 0.00 35.00 3.66
3354 3747 6.067263 TGTTATTCAGTAAAACCACACAGC 57.933 37.500 0.00 0.00 0.00 4.40
3355 3748 3.896648 ATTCAGTAAAACCACACAGCG 57.103 42.857 0.00 0.00 0.00 5.18
3356 3749 1.588674 TCAGTAAAACCACACAGCGG 58.411 50.000 0.00 0.00 0.00 5.52
3357 3750 1.139256 TCAGTAAAACCACACAGCGGA 59.861 47.619 0.00 0.00 0.00 5.54
3358 3751 1.263217 CAGTAAAACCACACAGCGGAC 59.737 52.381 0.00 0.00 0.00 4.79
3359 3752 1.140252 AGTAAAACCACACAGCGGACT 59.860 47.619 0.00 0.00 0.00 3.85
3370 3763 2.357034 GCGGACTGCTCGAACCAA 60.357 61.111 0.00 0.00 41.73 3.67
3371 3764 2.668280 GCGGACTGCTCGAACCAAC 61.668 63.158 0.00 0.00 41.73 3.77
3372 3765 2.027625 CGGACTGCTCGAACCAACC 61.028 63.158 0.00 0.00 0.00 3.77
3373 3766 1.371558 GGACTGCTCGAACCAACCT 59.628 57.895 0.00 0.00 0.00 3.50
3374 3767 0.670854 GGACTGCTCGAACCAACCTC 60.671 60.000 0.00 0.00 0.00 3.85
3375 3768 0.033504 GACTGCTCGAACCAACCTCA 59.966 55.000 0.00 0.00 0.00 3.86
3376 3769 0.468226 ACTGCTCGAACCAACCTCAA 59.532 50.000 0.00 0.00 0.00 3.02
3377 3770 0.868406 CTGCTCGAACCAACCTCAAC 59.132 55.000 0.00 0.00 0.00 3.18
3378 3771 0.534203 TGCTCGAACCAACCTCAACC 60.534 55.000 0.00 0.00 0.00 3.77
3379 3772 0.534203 GCTCGAACCAACCTCAACCA 60.534 55.000 0.00 0.00 0.00 3.67
3380 3773 1.512926 CTCGAACCAACCTCAACCAG 58.487 55.000 0.00 0.00 0.00 4.00
3399 3792 3.981516 AGGACTACCTGATCCTGATGA 57.018 47.619 0.00 0.00 44.00 2.92
3400 3793 3.571590 AGGACTACCTGATCCTGATGAC 58.428 50.000 0.00 0.00 44.00 3.06
3401 3794 3.206412 AGGACTACCTGATCCTGATGACT 59.794 47.826 0.00 0.00 44.00 3.41
3402 3795 3.320541 GGACTACCTGATCCTGATGACTG 59.679 52.174 0.00 0.00 31.75 3.51
3403 3796 2.697751 ACTACCTGATCCTGATGACTGC 59.302 50.000 0.00 0.00 0.00 4.40
3404 3797 1.576577 ACCTGATCCTGATGACTGCA 58.423 50.000 0.00 0.00 0.00 4.41
3405 3798 1.209019 ACCTGATCCTGATGACTGCAC 59.791 52.381 0.00 0.00 0.00 4.57
3406 3799 1.208776 CCTGATCCTGATGACTGCACA 59.791 52.381 0.00 0.00 0.00 4.57
3407 3800 2.158798 CCTGATCCTGATGACTGCACAT 60.159 50.000 0.00 0.00 0.00 3.21
3408 3801 3.542648 CTGATCCTGATGACTGCACATT 58.457 45.455 0.00 0.00 0.00 2.71
3409 3802 4.443881 CCTGATCCTGATGACTGCACATTA 60.444 45.833 0.00 0.00 0.00 1.90
3410 3803 5.101648 TGATCCTGATGACTGCACATTAA 57.898 39.130 0.00 0.00 0.00 1.40
3411 3804 5.687780 TGATCCTGATGACTGCACATTAAT 58.312 37.500 0.00 0.00 0.00 1.40
3412 3805 6.124340 TGATCCTGATGACTGCACATTAATT 58.876 36.000 0.00 0.00 0.00 1.40
3413 3806 6.604396 TGATCCTGATGACTGCACATTAATTT 59.396 34.615 0.00 0.00 0.00 1.82
3414 3807 6.198650 TCCTGATGACTGCACATTAATTTG 57.801 37.500 0.00 0.00 0.00 2.32
3415 3808 4.802039 CCTGATGACTGCACATTAATTTGC 59.198 41.667 17.76 17.76 39.33 3.68
3416 3809 5.393787 CCTGATGACTGCACATTAATTTGCT 60.394 40.000 23.23 7.88 39.62 3.91
3417 3810 5.404096 TGATGACTGCACATTAATTTGCTG 58.596 37.500 23.84 23.84 41.87 4.41
3418 3811 4.177165 TGACTGCACATTAATTTGCTGG 57.823 40.909 26.95 20.45 40.81 4.85
3419 3812 3.573538 TGACTGCACATTAATTTGCTGGT 59.426 39.130 26.95 22.60 40.81 4.00
3420 3813 4.168760 GACTGCACATTAATTTGCTGGTC 58.831 43.478 26.95 25.02 40.81 4.02
3421 3814 3.173599 CTGCACATTAATTTGCTGGTCG 58.826 45.455 23.23 6.95 39.62 4.79
3422 3815 1.919918 GCACATTAATTTGCTGGTCGC 59.080 47.619 17.41 1.23 35.74 5.19
3423 3816 2.415893 GCACATTAATTTGCTGGTCGCT 60.416 45.455 17.41 0.00 40.11 4.93
3424 3817 3.429085 CACATTAATTTGCTGGTCGCTC 58.571 45.455 0.00 0.00 40.11 5.03
3425 3818 2.095853 ACATTAATTTGCTGGTCGCTCG 59.904 45.455 0.00 0.00 40.11 5.03
3426 3819 2.087501 TTAATTTGCTGGTCGCTCGA 57.912 45.000 0.00 0.00 40.11 4.04
3427 3820 1.355971 TAATTTGCTGGTCGCTCGAC 58.644 50.000 13.45 13.45 43.87 4.20
3428 3821 0.320771 AATTTGCTGGTCGCTCGACT 60.321 50.000 19.88 0.00 44.04 4.18
3429 3822 0.737715 ATTTGCTGGTCGCTCGACTC 60.738 55.000 19.88 11.73 44.04 3.36
3430 3823 1.806461 TTTGCTGGTCGCTCGACTCT 61.806 55.000 19.88 0.00 44.04 3.24
3431 3824 0.958876 TTGCTGGTCGCTCGACTCTA 60.959 55.000 19.88 7.99 44.04 2.43
3432 3825 1.062845 GCTGGTCGCTCGACTCTAC 59.937 63.158 19.88 6.02 44.04 2.59
3433 3826 1.722677 CTGGTCGCTCGACTCTACC 59.277 63.158 19.88 6.30 44.04 3.18
3434 3827 1.002990 TGGTCGCTCGACTCTACCA 60.003 57.895 19.88 8.70 44.04 3.25
3435 3828 0.393944 TGGTCGCTCGACTCTACCAT 60.394 55.000 19.88 0.00 44.04 3.55
3436 3829 0.739561 GGTCGCTCGACTCTACCATT 59.260 55.000 19.88 0.00 44.04 3.16
3437 3830 1.134560 GGTCGCTCGACTCTACCATTT 59.865 52.381 19.88 0.00 44.04 2.32
3438 3831 2.452105 GTCGCTCGACTCTACCATTTC 58.548 52.381 14.42 0.00 41.57 2.17
3439 3832 1.404391 TCGCTCGACTCTACCATTTCC 59.596 52.381 0.00 0.00 0.00 3.13
3440 3833 1.841450 GCTCGACTCTACCATTTCCG 58.159 55.000 0.00 0.00 0.00 4.30
3441 3834 1.536284 GCTCGACTCTACCATTTCCGG 60.536 57.143 0.00 0.00 0.00 5.14
3442 3835 1.749634 CTCGACTCTACCATTTCCGGT 59.250 52.381 0.00 0.00 43.46 5.28
3443 3836 2.947652 CTCGACTCTACCATTTCCGGTA 59.052 50.000 0.00 0.00 40.67 4.02
3444 3837 2.684881 TCGACTCTACCATTTCCGGTAC 59.315 50.000 0.00 0.00 40.67 3.34
3445 3838 2.424601 CGACTCTACCATTTCCGGTACA 59.575 50.000 0.00 0.00 40.67 2.90
3446 3839 3.067742 CGACTCTACCATTTCCGGTACAT 59.932 47.826 0.00 0.00 40.67 2.29
3447 3840 4.441079 CGACTCTACCATTTCCGGTACATT 60.441 45.833 0.00 0.00 40.67 2.71
3448 3841 5.019785 ACTCTACCATTTCCGGTACATTC 57.980 43.478 0.00 0.00 40.67 2.67
3449 3842 4.715297 ACTCTACCATTTCCGGTACATTCT 59.285 41.667 0.00 0.00 40.67 2.40
3450 3843 5.018539 TCTACCATTTCCGGTACATTCTG 57.981 43.478 0.00 0.00 40.67 3.02
3451 3844 3.713826 ACCATTTCCGGTACATTCTGT 57.286 42.857 0.00 0.00 37.57 3.41
3452 3845 4.028993 ACCATTTCCGGTACATTCTGTT 57.971 40.909 0.00 0.00 37.57 3.16
3453 3846 4.403734 ACCATTTCCGGTACATTCTGTTT 58.596 39.130 0.00 0.00 37.57 2.83
3454 3847 5.562635 ACCATTTCCGGTACATTCTGTTTA 58.437 37.500 0.00 0.00 37.57 2.01
3455 3848 6.184789 ACCATTTCCGGTACATTCTGTTTAT 58.815 36.000 0.00 0.00 37.57 1.40
3456 3849 6.661805 ACCATTTCCGGTACATTCTGTTTATT 59.338 34.615 0.00 0.00 37.57 1.40
3457 3850 6.972328 CCATTTCCGGTACATTCTGTTTATTG 59.028 38.462 0.00 0.00 0.00 1.90
3458 3851 7.362574 CCATTTCCGGTACATTCTGTTTATTGT 60.363 37.037 0.00 0.00 0.00 2.71
3459 3852 7.513371 TTTCCGGTACATTCTGTTTATTGTT 57.487 32.000 0.00 0.00 0.00 2.83
3460 3853 7.513371 TTCCGGTACATTCTGTTTATTGTTT 57.487 32.000 0.00 0.00 0.00 2.83
3461 3854 6.904498 TCCGGTACATTCTGTTTATTGTTTG 58.096 36.000 0.00 0.00 0.00 2.93
3462 3855 6.711194 TCCGGTACATTCTGTTTATTGTTTGA 59.289 34.615 0.00 0.00 0.00 2.69
3463 3856 7.392113 TCCGGTACATTCTGTTTATTGTTTGAT 59.608 33.333 0.00 0.00 0.00 2.57
3464 3857 8.026607 CCGGTACATTCTGTTTATTGTTTGATT 58.973 33.333 0.00 0.00 0.00 2.57
3485 3878 9.513906 TTGATTATCTTCACCTTCATTAACACA 57.486 29.630 0.00 0.00 0.00 3.72
3486 3879 9.166173 TGATTATCTTCACCTTCATTAACACAG 57.834 33.333 0.00 0.00 0.00 3.66
3487 3880 7.921786 TTATCTTCACCTTCATTAACACAGG 57.078 36.000 0.00 0.00 0.00 4.00
3488 3881 4.072131 TCTTCACCTTCATTAACACAGGC 58.928 43.478 0.00 0.00 0.00 4.85
3489 3882 3.500448 TCACCTTCATTAACACAGGCA 57.500 42.857 0.00 0.00 0.00 4.75
3490 3883 3.146066 TCACCTTCATTAACACAGGCAC 58.854 45.455 0.00 0.00 0.00 5.01
3491 3884 2.228822 CACCTTCATTAACACAGGCACC 59.771 50.000 0.00 0.00 0.00 5.01
3492 3885 2.108250 ACCTTCATTAACACAGGCACCT 59.892 45.455 0.00 0.00 0.00 4.00
3493 3886 3.157087 CCTTCATTAACACAGGCACCTT 58.843 45.455 0.00 0.00 0.00 3.50
3494 3887 3.573967 CCTTCATTAACACAGGCACCTTT 59.426 43.478 0.00 0.00 0.00 3.11
3495 3888 4.039124 CCTTCATTAACACAGGCACCTTTT 59.961 41.667 0.00 0.00 0.00 2.27
3496 3889 4.846779 TCATTAACACAGGCACCTTTTC 57.153 40.909 0.00 0.00 0.00 2.29
3497 3890 3.572255 TCATTAACACAGGCACCTTTTCC 59.428 43.478 0.00 0.00 0.00 3.13
3498 3891 1.600023 TAACACAGGCACCTTTTCCG 58.400 50.000 0.00 0.00 0.00 4.30
3499 3892 0.106918 AACACAGGCACCTTTTCCGA 60.107 50.000 0.00 0.00 0.00 4.55
3500 3893 0.110486 ACACAGGCACCTTTTCCGAT 59.890 50.000 0.00 0.00 0.00 4.18
3501 3894 1.247567 CACAGGCACCTTTTCCGATT 58.752 50.000 0.00 0.00 0.00 3.34
3502 3895 1.613437 CACAGGCACCTTTTCCGATTT 59.387 47.619 0.00 0.00 0.00 2.17
3503 3896 1.886542 ACAGGCACCTTTTCCGATTTC 59.113 47.619 0.00 0.00 0.00 2.17
3504 3897 1.885887 CAGGCACCTTTTCCGATTTCA 59.114 47.619 0.00 0.00 0.00 2.69
3505 3898 2.493278 CAGGCACCTTTTCCGATTTCAT 59.507 45.455 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 0.470341 GCCATTCCCTACACTCCTCC 59.530 60.000 0.00 0.00 0.00 4.30
86 87 7.292356 TGAGTAGATAGAATTTGCCATTCCCTA 59.708 37.037 2.78 1.22 0.00 3.53
1211 1236 0.178992 CAAACTGCTGGTCCCTTCCA 60.179 55.000 0.00 0.00 36.00 3.53
1351 1659 3.089284 TGAATCCTGCGAAGTCTCTGTA 58.911 45.455 0.00 0.00 0.00 2.74
1477 1788 7.173390 AGGACTGATAGTAACTTTTTCAAGTGC 59.827 37.037 0.00 0.00 42.89 4.40
1489 1800 6.777213 TTCTTGGAGAGGACTGATAGTAAC 57.223 41.667 0.00 0.00 0.00 2.50
1520 1831 0.035915 GCCTTGAGGAGTGAAGGACC 60.036 60.000 0.06 0.00 41.26 4.46
1555 1866 4.130857 GGGCCATAAAAGAGACTTAGCTC 58.869 47.826 4.39 0.00 35.11 4.09
1566 1877 5.047092 AGACTTCAAACATGGGCCATAAAAG 60.047 40.000 20.73 18.35 0.00 2.27
1619 1930 1.457643 CCCGTGATCCCTAGCTCCA 60.458 63.158 0.00 0.00 0.00 3.86
1665 1976 0.110486 GGGAGGTGAGGAACTGCAAA 59.890 55.000 0.00 0.00 41.55 3.68
1791 2102 4.578105 GCCCTGATCTCAAGTTTATCAAGG 59.422 45.833 0.00 0.00 35.29 3.61
1879 2190 1.066430 TGTCAATTCTGGACTACGCCC 60.066 52.381 0.00 0.00 36.26 6.13
1899 2210 2.100128 AGCATCCCAGCTGTAGAGAT 57.900 50.000 13.81 6.47 44.66 2.75
1929 2240 7.279758 TCGCATTTTTCAATTTCCAACTCTTTT 59.720 29.630 0.00 0.00 0.00 2.27
1959 2270 2.060980 GCCCTCGATGGACTCCAGT 61.061 63.158 11.34 0.00 36.75 4.00
1962 2273 2.444895 AGGCCCTCGATGGACTCC 60.445 66.667 9.67 1.47 41.02 3.85
1983 2294 7.918076 TCAGGTATTTCAGGTTTCTACAGAAT 58.082 34.615 0.00 0.00 33.54 2.40
2049 2360 3.716006 CCTTGCTGGTGCGACACG 61.716 66.667 0.00 0.00 43.34 4.49
2075 2386 0.679505 TTCCAGTCCAGACAAGGTCG 59.320 55.000 0.00 0.00 37.67 4.79
2078 2389 2.370189 AGAGTTTCCAGTCCAGACAAGG 59.630 50.000 0.00 2.02 0.00 3.61
2081 2392 3.038280 TCAAGAGTTTCCAGTCCAGACA 58.962 45.455 0.00 0.00 0.00 3.41
2106 2418 0.393077 AAAGGACAGACCCGTCACTG 59.607 55.000 0.00 0.00 40.05 3.66
2114 2429 1.353091 AGACCTGGAAAGGACAGACC 58.647 55.000 0.00 0.00 38.20 3.85
2115 2430 3.071747 AGAAAGACCTGGAAAGGACAGAC 59.928 47.826 0.00 0.00 38.20 3.51
2131 2446 2.642427 TGTGAGCTGTTTGCAGAAAGA 58.358 42.857 0.00 0.00 45.28 2.52
2133 2448 3.216800 AGATGTGAGCTGTTTGCAGAAA 58.783 40.909 0.00 0.00 45.28 2.52
2158 2473 0.456628 GAGCCGAACTGTAGGAGTCC 59.543 60.000 0.00 0.00 31.73 3.85
2162 2477 1.004394 TCTCAGAGCCGAACTGTAGGA 59.996 52.381 6.44 0.00 36.81 2.94
2183 2498 3.569701 GCTCTCTCCTCTCCATTCACTAG 59.430 52.174 0.00 0.00 0.00 2.57
2191 2506 0.411452 ACCAAGCTCTCTCCTCTCCA 59.589 55.000 0.00 0.00 0.00 3.86
2192 2507 0.823460 CACCAAGCTCTCTCCTCTCC 59.177 60.000 0.00 0.00 0.00 3.71
2193 2508 1.750778 CTCACCAAGCTCTCTCCTCTC 59.249 57.143 0.00 0.00 0.00 3.20
2194 2509 1.851304 CTCACCAAGCTCTCTCCTCT 58.149 55.000 0.00 0.00 0.00 3.69
2220 2535 1.219393 CGCTCCCTCTTGTTCCTCC 59.781 63.158 0.00 0.00 0.00 4.30
2233 2548 2.094130 AGGTTAGAAGCTGTAACGCTCC 60.094 50.000 11.31 1.16 39.86 4.70
2265 2580 1.745087 TGGCATCTCCGAAATTGAAGC 59.255 47.619 0.00 0.00 37.80 3.86
2285 2600 3.326006 TGCAGGAAGTGACAAGAGATTCT 59.674 43.478 0.00 0.00 0.00 2.40
2310 2625 3.577919 GAGGGAGGTCAGGCTATTAAGA 58.422 50.000 0.00 0.00 0.00 2.10
2314 2629 0.261991 TCGAGGGAGGTCAGGCTATT 59.738 55.000 0.00 0.00 0.00 1.73
2409 2724 6.975772 GCTCCTCACTACAGTAGAATAACTTG 59.024 42.308 14.94 0.42 0.00 3.16
2421 2736 0.665835 CGGCTAGCTCCTCACTACAG 59.334 60.000 15.72 0.00 0.00 2.74
2424 2739 1.384989 GCACGGCTAGCTCCTCACTA 61.385 60.000 15.72 0.00 0.00 2.74
2438 2753 2.789208 CTACAATTCTGCATTGCACGG 58.211 47.619 7.38 0.00 45.74 4.94
2440 2755 3.220507 TGCTACAATTCTGCATTGCAC 57.779 42.857 7.38 0.00 45.74 4.57
2463 2778 2.930109 TCCTCACCCTTAGCTTCTCT 57.070 50.000 0.00 0.00 0.00 3.10
2478 2794 3.068732 TCACATCCTGACGATCAATCCTC 59.931 47.826 0.00 0.00 0.00 3.71
2511 2828 7.592885 AAAGTGTACCTTAGAAGTAGACACA 57.407 36.000 15.34 0.00 36.66 3.72
2536 2853 6.833416 ACTAATTATGTAGGCAAAATGCTCCA 59.167 34.615 2.00 0.00 44.28 3.86
2619 2985 2.157834 ATGTGGCACTTGCACAAATG 57.842 45.000 19.83 0.00 44.36 2.32
2671 3042 0.749454 GCTTTCCTGCGTCCATCCAT 60.749 55.000 0.00 0.00 0.00 3.41
2689 3060 3.089284 ACTTACCACTTTGCCCTTATGC 58.911 45.455 0.00 0.00 0.00 3.14
2694 3065 3.595190 AAAGACTTACCACTTTGCCCT 57.405 42.857 0.00 0.00 35.44 5.19
2727 3098 3.891049 AGAGTGAAAGGTGATAATGCCC 58.109 45.455 0.00 0.00 0.00 5.36
2736 3107 6.317391 AGAGAAACAAGAAAGAGTGAAAGGTG 59.683 38.462 0.00 0.00 0.00 4.00
2742 3113 8.012957 ACTAGAAGAGAAACAAGAAAGAGTGA 57.987 34.615 0.00 0.00 0.00 3.41
2743 3114 8.547069 CAACTAGAAGAGAAACAAGAAAGAGTG 58.453 37.037 0.00 0.00 0.00 3.51
2744 3115 7.713073 CCAACTAGAAGAGAAACAAGAAAGAGT 59.287 37.037 0.00 0.00 0.00 3.24
2748 3119 6.542370 CCACCAACTAGAAGAGAAACAAGAAA 59.458 38.462 0.00 0.00 0.00 2.52
2756 3127 2.303022 CCAGCCACCAACTAGAAGAGAA 59.697 50.000 0.00 0.00 0.00 2.87
2757 3128 1.902508 CCAGCCACCAACTAGAAGAGA 59.097 52.381 0.00 0.00 0.00 3.10
2777 3148 0.665972 GCTCTAGCATAGCTCACGGC 60.666 60.000 0.00 0.00 40.44 5.68
2793 3164 3.375299 CACACTATGGTAAGGCTTTGCTC 59.625 47.826 4.45 0.00 0.00 4.26
2798 3169 2.305927 ACAGCACACTATGGTAAGGCTT 59.694 45.455 4.58 4.58 36.72 4.35
2809 3180 2.719531 TCACCCAAAACAGCACACTA 57.280 45.000 0.00 0.00 0.00 2.74
2810 3181 2.071778 ATCACCCAAAACAGCACACT 57.928 45.000 0.00 0.00 0.00 3.55
2813 3184 3.177997 ACAAATCACCCAAAACAGCAC 57.822 42.857 0.00 0.00 0.00 4.40
2816 3187 7.714813 AGGATAAAAACAAATCACCCAAAACAG 59.285 33.333 0.00 0.00 0.00 3.16
2818 3189 7.713073 TCAGGATAAAAACAAATCACCCAAAAC 59.287 33.333 0.00 0.00 0.00 2.43
2821 3192 6.985653 TCAGGATAAAAACAAATCACCCAA 57.014 33.333 0.00 0.00 0.00 4.12
2822 3193 7.552050 AATCAGGATAAAAACAAATCACCCA 57.448 32.000 0.00 0.00 0.00 4.51
2823 3194 8.749354 ACTAATCAGGATAAAAACAAATCACCC 58.251 33.333 0.00 0.00 0.00 4.61
2846 3224 1.902508 CCCTGAGCCACTGAGAAACTA 59.097 52.381 0.00 0.00 0.00 2.24
2849 3227 1.280133 CATCCCTGAGCCACTGAGAAA 59.720 52.381 0.00 0.00 0.00 2.52
2852 3230 1.411977 CTACATCCCTGAGCCACTGAG 59.588 57.143 0.00 0.00 0.00 3.35
2853 3231 1.273267 ACTACATCCCTGAGCCACTGA 60.273 52.381 0.00 0.00 0.00 3.41
2854 3232 1.198713 ACTACATCCCTGAGCCACTG 58.801 55.000 0.00 0.00 0.00 3.66
2855 3233 2.848678 TACTACATCCCTGAGCCACT 57.151 50.000 0.00 0.00 0.00 4.00
2856 3234 4.130118 CAAATACTACATCCCTGAGCCAC 58.870 47.826 0.00 0.00 0.00 5.01
2857 3235 3.136443 CCAAATACTACATCCCTGAGCCA 59.864 47.826 0.00 0.00 0.00 4.75
2858 3236 3.744660 CCAAATACTACATCCCTGAGCC 58.255 50.000 0.00 0.00 0.00 4.70
2860 3238 3.069586 TCGCCAAATACTACATCCCTGAG 59.930 47.826 0.00 0.00 0.00 3.35
2861 3239 3.035363 TCGCCAAATACTACATCCCTGA 58.965 45.455 0.00 0.00 0.00 3.86
2862 3240 3.469008 TCGCCAAATACTACATCCCTG 57.531 47.619 0.00 0.00 0.00 4.45
2863 3241 6.374417 AATATCGCCAAATACTACATCCCT 57.626 37.500 0.00 0.00 0.00 4.20
2864 3242 8.732746 AATAATATCGCCAAATACTACATCCC 57.267 34.615 0.00 0.00 0.00 3.85
2871 3249 8.926710 CGAGAAGAAATAATATCGCCAAATACT 58.073 33.333 0.00 0.00 0.00 2.12
2872 3250 8.169268 CCGAGAAGAAATAATATCGCCAAATAC 58.831 37.037 0.00 0.00 0.00 1.89
2873 3251 7.876068 ACCGAGAAGAAATAATATCGCCAAATA 59.124 33.333 0.00 0.00 0.00 1.40
2890 3271 7.813148 CACTTAATCAGAAAGTAACCGAGAAGA 59.187 37.037 0.00 0.00 35.44 2.87
2896 3277 7.827819 TCATCACTTAATCAGAAAGTAACCG 57.172 36.000 0.00 0.00 35.44 4.44
2912 3293 8.641498 AACATACTGGAATCTTTTCATCACTT 57.359 30.769 0.00 0.00 33.23 3.16
2929 3310 8.380644 CGTGATTAAGTACCAGAAAACATACTG 58.619 37.037 0.00 0.00 0.00 2.74
2931 3312 7.148540 TGCGTGATTAAGTACCAGAAAACATAC 60.149 37.037 0.00 0.00 0.00 2.39
2933 3314 5.703592 TGCGTGATTAAGTACCAGAAAACAT 59.296 36.000 0.00 0.00 0.00 2.71
2943 3324 4.632153 AGATGGGATGCGTGATTAAGTAC 58.368 43.478 0.00 0.00 0.00 2.73
2947 3328 3.876914 GACAAGATGGGATGCGTGATTAA 59.123 43.478 0.00 0.00 0.00 1.40
2951 3332 0.107703 GGACAAGATGGGATGCGTGA 60.108 55.000 0.00 0.00 0.00 4.35
2952 3333 0.392863 TGGACAAGATGGGATGCGTG 60.393 55.000 0.00 0.00 0.00 5.34
2954 3335 0.107508 ACTGGACAAGATGGGATGCG 60.108 55.000 0.00 0.00 0.00 4.73
2983 3364 0.037303 TCAGAAAAGCAGAGGGGCTG 59.963 55.000 0.00 0.00 45.07 4.85
2985 3366 1.340405 TGATCAGAAAAGCAGAGGGGC 60.340 52.381 0.00 0.00 0.00 5.80
2986 3367 2.751806 GTTGATCAGAAAAGCAGAGGGG 59.248 50.000 0.00 0.00 0.00 4.79
2987 3368 3.190118 GTGTTGATCAGAAAAGCAGAGGG 59.810 47.826 0.00 0.00 0.00 4.30
2991 3372 9.282247 GTTAATATGTGTTGATCAGAAAAGCAG 57.718 33.333 0.00 0.00 0.00 4.24
3014 3396 6.986812 AGGAGAGCCTAGCTAACAGCGTTA 62.987 50.000 0.00 2.12 44.74 3.18
3017 3399 2.359861 AGGAGAGCCTAGCTAACAGCG 61.360 57.143 0.00 0.00 44.74 5.18
3029 3411 0.179051 CCATGCAAGAGAGGAGAGCC 60.179 60.000 0.00 0.00 0.00 4.70
3030 3412 0.540923 ACCATGCAAGAGAGGAGAGC 59.459 55.000 0.00 0.00 0.00 4.09
3031 3413 2.738000 CGAACCATGCAAGAGAGGAGAG 60.738 54.545 0.00 0.00 0.00 3.20
3032 3414 1.205655 CGAACCATGCAAGAGAGGAGA 59.794 52.381 0.00 0.00 0.00 3.71
3033 3415 1.205655 TCGAACCATGCAAGAGAGGAG 59.794 52.381 0.00 0.00 0.00 3.69
3034 3416 1.266178 TCGAACCATGCAAGAGAGGA 58.734 50.000 0.00 0.00 0.00 3.71
3035 3417 2.322355 ATCGAACCATGCAAGAGAGG 57.678 50.000 0.00 0.00 0.00 3.69
3036 3418 5.801350 TTTTATCGAACCATGCAAGAGAG 57.199 39.130 0.00 0.00 0.00 3.20
3072 3459 2.264005 TGGTGCATTACGGTGTTTCT 57.736 45.000 0.00 0.00 0.00 2.52
3079 3466 3.793129 GCAAGATCATTGGTGCATTACGG 60.793 47.826 0.00 0.00 36.97 4.02
3090 3477 2.905959 TTGTGCGAGCAAGATCATTG 57.094 45.000 0.00 0.00 0.00 2.82
3095 3482 3.648339 AATTGTTTGTGCGAGCAAGAT 57.352 38.095 0.00 0.00 0.00 2.40
3104 3491 5.006941 GGATGGCATGATAAATTGTTTGTGC 59.993 40.000 3.81 0.00 0.00 4.57
3107 3494 5.920903 AGGGATGGCATGATAAATTGTTTG 58.079 37.500 3.81 0.00 0.00 2.93
3111 3498 4.836736 AGGAAGGGATGGCATGATAAATTG 59.163 41.667 3.81 0.00 0.00 2.32
3112 3499 5.082425 GAGGAAGGGATGGCATGATAAATT 58.918 41.667 3.81 0.00 0.00 1.82
3122 3509 1.153005 CAGCAGAGGAAGGGATGGC 60.153 63.158 0.00 0.00 0.00 4.40
3126 3513 1.842920 TGCACAGCAGAGGAAGGGA 60.843 57.895 0.00 0.00 33.32 4.20
3129 3516 2.462456 TTAGTGCACAGCAGAGGAAG 57.538 50.000 21.04 0.00 40.08 3.46
3138 3525 3.648339 ACAAGCCAAATTAGTGCACAG 57.352 42.857 21.04 1.14 0.00 3.66
3140 3527 6.868339 AGAAAATACAAGCCAAATTAGTGCAC 59.132 34.615 9.40 9.40 0.00 4.57
3141 3528 6.991938 AGAAAATACAAGCCAAATTAGTGCA 58.008 32.000 0.00 0.00 0.00 4.57
3162 3549 6.989759 TGCTGAACAGTCAACTACAAATAGAA 59.010 34.615 3.77 0.00 31.88 2.10
3224 3616 9.210329 CGAGACAGATGATACAGTAACTAGTAT 57.790 37.037 0.00 0.00 33.85 2.12
3236 3629 3.969899 TGCATCACGAGACAGATGATAC 58.030 45.455 6.60 0.00 43.28 2.24
3237 3630 3.633986 ACTGCATCACGAGACAGATGATA 59.366 43.478 7.33 0.00 43.28 2.15
3238 3631 2.429971 ACTGCATCACGAGACAGATGAT 59.570 45.455 7.33 0.00 43.28 2.45
3239 3632 1.821136 ACTGCATCACGAGACAGATGA 59.179 47.619 7.33 0.00 43.28 2.92
3257 3650 3.380004 TGTCCATTTTTCACAGCGAAACT 59.620 39.130 0.00 0.00 43.35 2.66
3258 3651 3.701241 TGTCCATTTTTCACAGCGAAAC 58.299 40.909 0.00 0.00 43.35 2.78
3263 3656 1.340889 TGCCTGTCCATTTTTCACAGC 59.659 47.619 0.00 0.00 36.91 4.40
3270 3663 2.875296 TGCTAACTGCCTGTCCATTTT 58.125 42.857 0.00 0.00 42.00 1.82
3272 3665 2.584835 TTGCTAACTGCCTGTCCATT 57.415 45.000 0.00 0.00 42.00 3.16
3274 3667 2.092968 CCTATTGCTAACTGCCTGTCCA 60.093 50.000 0.00 0.00 42.00 4.02
3278 3671 3.758554 ACAAACCTATTGCTAACTGCCTG 59.241 43.478 0.00 0.00 42.00 4.85
3279 3672 4.034285 ACAAACCTATTGCTAACTGCCT 57.966 40.909 0.00 0.00 42.00 4.75
3281 3674 6.496338 AGTAACAAACCTATTGCTAACTGC 57.504 37.500 0.00 0.00 43.25 4.40
3283 3676 9.788889 ACTTTAGTAACAAACCTATTGCTAACT 57.211 29.630 0.00 0.00 34.18 2.24
3302 3695 9.178758 CCTGGAGCAAAATAAGAATACTTTAGT 57.821 33.333 0.00 0.00 37.53 2.24
3305 3698 8.422577 AACCTGGAGCAAAATAAGAATACTTT 57.577 30.769 0.00 0.00 37.53 2.66
3313 3706 8.087750 TGAATAACAAACCTGGAGCAAAATAAG 58.912 33.333 0.00 0.00 0.00 1.73
3325 3718 7.434013 GTGTGGTTTTACTGAATAACAAACCTG 59.566 37.037 12.15 0.00 35.74 4.00
3331 3724 5.277586 CGCTGTGTGGTTTTACTGAATAACA 60.278 40.000 0.00 0.00 0.00 2.41
3332 3725 5.144359 CGCTGTGTGGTTTTACTGAATAAC 58.856 41.667 0.00 0.00 0.00 1.89
3344 3737 2.591715 GCAGTCCGCTGTGTGGTT 60.592 61.111 0.00 0.00 44.32 3.67
3353 3746 2.357034 TTGGTTCGAGCAGTCCGC 60.357 61.111 0.53 0.00 42.91 5.54
3354 3747 2.027625 GGTTGGTTCGAGCAGTCCG 61.028 63.158 0.53 0.00 0.00 4.79
3355 3748 0.670854 GAGGTTGGTTCGAGCAGTCC 60.671 60.000 0.53 0.00 0.00 3.85
3356 3749 0.033504 TGAGGTTGGTTCGAGCAGTC 59.966 55.000 0.53 0.00 0.00 3.51
3357 3750 0.468226 TTGAGGTTGGTTCGAGCAGT 59.532 50.000 0.53 0.00 0.00 4.40
3358 3751 0.868406 GTTGAGGTTGGTTCGAGCAG 59.132 55.000 0.53 0.00 0.00 4.24
3359 3752 0.534203 GGTTGAGGTTGGTTCGAGCA 60.534 55.000 0.53 0.00 0.00 4.26
3360 3753 0.534203 TGGTTGAGGTTGGTTCGAGC 60.534 55.000 0.00 0.00 0.00 5.03
3361 3754 1.512926 CTGGTTGAGGTTGGTTCGAG 58.487 55.000 0.00 0.00 0.00 4.04
3362 3755 0.107831 CCTGGTTGAGGTTGGTTCGA 59.892 55.000 0.00 0.00 37.02 3.71
3363 3756 0.107831 TCCTGGTTGAGGTTGGTTCG 59.892 55.000 0.00 0.00 43.37 3.95
3364 3757 1.143073 AGTCCTGGTTGAGGTTGGTTC 59.857 52.381 0.00 0.00 43.37 3.62
3365 3758 1.222567 AGTCCTGGTTGAGGTTGGTT 58.777 50.000 0.00 0.00 43.37 3.67
3366 3759 1.697982 GTAGTCCTGGTTGAGGTTGGT 59.302 52.381 0.00 0.00 43.37 3.67
3367 3760 1.003233 GGTAGTCCTGGTTGAGGTTGG 59.997 57.143 0.00 0.00 43.37 3.77
3368 3761 1.978580 AGGTAGTCCTGGTTGAGGTTG 59.021 52.381 0.00 0.00 43.33 3.77
3369 3762 2.417719 AGGTAGTCCTGGTTGAGGTT 57.582 50.000 0.00 0.00 43.33 3.50
3379 3772 3.206412 AGTCATCAGGATCAGGTAGTCCT 59.794 47.826 0.00 0.00 45.60 3.85
3380 3773 3.320541 CAGTCATCAGGATCAGGTAGTCC 59.679 52.174 0.00 0.00 34.64 3.85
3381 3774 3.243704 GCAGTCATCAGGATCAGGTAGTC 60.244 52.174 0.00 0.00 0.00 2.59
3382 3775 2.697751 GCAGTCATCAGGATCAGGTAGT 59.302 50.000 0.00 0.00 0.00 2.73
3383 3776 2.697229 TGCAGTCATCAGGATCAGGTAG 59.303 50.000 0.00 0.00 0.00 3.18
3384 3777 2.432146 GTGCAGTCATCAGGATCAGGTA 59.568 50.000 0.00 0.00 0.00 3.08
3385 3778 1.209019 GTGCAGTCATCAGGATCAGGT 59.791 52.381 0.00 0.00 0.00 4.00
3386 3779 1.208776 TGTGCAGTCATCAGGATCAGG 59.791 52.381 0.00 0.00 0.00 3.86
3387 3780 2.685850 TGTGCAGTCATCAGGATCAG 57.314 50.000 0.00 0.00 0.00 2.90
3388 3781 3.639672 AATGTGCAGTCATCAGGATCA 57.360 42.857 0.00 0.00 0.00 2.92
3389 3782 6.630444 AATTAATGTGCAGTCATCAGGATC 57.370 37.500 0.00 0.00 0.00 3.36
3390 3783 6.682113 GCAAATTAATGTGCAGTCATCAGGAT 60.682 38.462 23.16 0.00 40.58 3.24
3391 3784 5.393352 GCAAATTAATGTGCAGTCATCAGGA 60.393 40.000 23.16 0.00 40.58 3.86
3392 3785 4.802039 GCAAATTAATGTGCAGTCATCAGG 59.198 41.667 23.16 0.00 40.58 3.86
3393 3786 5.515270 CAGCAAATTAATGTGCAGTCATCAG 59.485 40.000 28.20 7.41 43.42 2.90
3394 3787 5.404096 CAGCAAATTAATGTGCAGTCATCA 58.596 37.500 28.20 0.00 43.42 3.07
3395 3788 4.802039 CCAGCAAATTAATGTGCAGTCATC 59.198 41.667 28.20 1.78 43.42 2.92
3396 3789 4.221262 ACCAGCAAATTAATGTGCAGTCAT 59.779 37.500 28.20 8.24 43.42 3.06
3397 3790 3.573538 ACCAGCAAATTAATGTGCAGTCA 59.426 39.130 28.20 0.00 43.42 3.41
3398 3791 4.168760 GACCAGCAAATTAATGTGCAGTC 58.831 43.478 28.20 26.77 43.42 3.51
3399 3792 3.366273 CGACCAGCAAATTAATGTGCAGT 60.366 43.478 28.20 24.04 43.42 4.40
3400 3793 3.173599 CGACCAGCAAATTAATGTGCAG 58.826 45.455 28.20 21.45 43.42 4.41
3401 3794 3.214697 CGACCAGCAAATTAATGTGCA 57.785 42.857 28.20 0.00 43.42 4.57
3414 3807 1.062845 GTAGAGTCGAGCGACCAGC 59.937 63.158 18.28 9.21 45.59 4.85
3415 3808 1.025113 TGGTAGAGTCGAGCGACCAG 61.025 60.000 18.28 0.00 45.59 4.00
3416 3809 0.393944 ATGGTAGAGTCGAGCGACCA 60.394 55.000 18.28 18.17 45.59 4.02
3417 3810 0.739561 AATGGTAGAGTCGAGCGACC 59.260 55.000 18.28 10.58 45.59 4.79
3418 3811 2.452105 GAAATGGTAGAGTCGAGCGAC 58.548 52.381 14.65 14.65 44.86 5.19
3419 3812 1.404391 GGAAATGGTAGAGTCGAGCGA 59.596 52.381 0.00 0.00 0.00 4.93
3420 3813 1.841450 GGAAATGGTAGAGTCGAGCG 58.159 55.000 0.00 0.00 0.00 5.03
3421 3814 1.536284 CCGGAAATGGTAGAGTCGAGC 60.536 57.143 0.00 0.00 0.00 5.03
3422 3815 1.749634 ACCGGAAATGGTAGAGTCGAG 59.250 52.381 9.46 0.00 41.55 4.04
3423 3816 1.843368 ACCGGAAATGGTAGAGTCGA 58.157 50.000 9.46 0.00 41.55 4.20
3424 3817 2.424601 TGTACCGGAAATGGTAGAGTCG 59.575 50.000 9.46 0.00 44.92 4.18
3425 3818 4.667519 ATGTACCGGAAATGGTAGAGTC 57.332 45.455 9.46 0.00 44.92 3.36
3426 3819 4.715297 AGAATGTACCGGAAATGGTAGAGT 59.285 41.667 9.46 0.00 44.92 3.24
3427 3820 5.050490 CAGAATGTACCGGAAATGGTAGAG 58.950 45.833 9.46 0.00 44.92 2.43
3428 3821 5.018539 CAGAATGTACCGGAAATGGTAGA 57.981 43.478 9.46 0.00 44.92 2.59
3459 3852 9.513906 TGTGTTAATGAAGGTGAAGATAATCAA 57.486 29.630 0.00 0.00 0.00 2.57
3460 3853 9.166173 CTGTGTTAATGAAGGTGAAGATAATCA 57.834 33.333 0.00 0.00 0.00 2.57
3461 3854 8.616076 CCTGTGTTAATGAAGGTGAAGATAATC 58.384 37.037 0.00 0.00 0.00 1.75
3462 3855 7.067494 GCCTGTGTTAATGAAGGTGAAGATAAT 59.933 37.037 0.00 0.00 32.06 1.28
3463 3856 6.374333 GCCTGTGTTAATGAAGGTGAAGATAA 59.626 38.462 0.00 0.00 32.06 1.75
3464 3857 5.880332 GCCTGTGTTAATGAAGGTGAAGATA 59.120 40.000 0.00 0.00 32.06 1.98
3465 3858 4.702131 GCCTGTGTTAATGAAGGTGAAGAT 59.298 41.667 0.00 0.00 32.06 2.40
3466 3859 4.072131 GCCTGTGTTAATGAAGGTGAAGA 58.928 43.478 0.00 0.00 32.06 2.87
3467 3860 3.820467 TGCCTGTGTTAATGAAGGTGAAG 59.180 43.478 0.00 0.00 32.06 3.02
3468 3861 3.568007 GTGCCTGTGTTAATGAAGGTGAA 59.432 43.478 0.00 0.00 32.06 3.18
3469 3862 3.146066 GTGCCTGTGTTAATGAAGGTGA 58.854 45.455 0.00 0.00 32.06 4.02
3470 3863 2.228822 GGTGCCTGTGTTAATGAAGGTG 59.771 50.000 0.00 0.00 32.06 4.00
3471 3864 2.108250 AGGTGCCTGTGTTAATGAAGGT 59.892 45.455 0.00 0.00 32.06 3.50
3472 3865 2.795329 AGGTGCCTGTGTTAATGAAGG 58.205 47.619 0.00 0.00 0.00 3.46
3473 3866 4.853924 AAAGGTGCCTGTGTTAATGAAG 57.146 40.909 0.00 0.00 0.00 3.02
3474 3867 4.038642 GGAAAAGGTGCCTGTGTTAATGAA 59.961 41.667 0.00 0.00 0.00 2.57
3475 3868 3.572255 GGAAAAGGTGCCTGTGTTAATGA 59.428 43.478 0.00 0.00 0.00 2.57
3476 3869 3.611530 CGGAAAAGGTGCCTGTGTTAATG 60.612 47.826 0.00 0.00 0.00 1.90
3477 3870 2.556622 CGGAAAAGGTGCCTGTGTTAAT 59.443 45.455 0.00 0.00 0.00 1.40
3478 3871 1.950909 CGGAAAAGGTGCCTGTGTTAA 59.049 47.619 0.00 0.00 0.00 2.01
3479 3872 1.141254 TCGGAAAAGGTGCCTGTGTTA 59.859 47.619 0.00 0.00 0.00 2.41
3480 3873 0.106918 TCGGAAAAGGTGCCTGTGTT 60.107 50.000 0.00 0.00 0.00 3.32
3481 3874 0.110486 ATCGGAAAAGGTGCCTGTGT 59.890 50.000 0.00 0.00 0.00 3.72
3482 3875 1.247567 AATCGGAAAAGGTGCCTGTG 58.752 50.000 0.00 0.00 0.00 3.66
3483 3876 1.886542 GAAATCGGAAAAGGTGCCTGT 59.113 47.619 0.00 0.00 0.00 4.00
3484 3877 1.885887 TGAAATCGGAAAAGGTGCCTG 59.114 47.619 0.00 0.00 0.00 4.85
3485 3878 2.286365 TGAAATCGGAAAAGGTGCCT 57.714 45.000 0.00 0.00 0.00 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.