Multiple sequence alignment - TraesCS2A01G459400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G459400 chr2A 100.000 3223 0 0 1 3223 706512053 706508831 0.000000e+00 5952.0
1 TraesCS2A01G459400 chr2A 85.276 978 78 23 1085 2034 706530460 706529521 0.000000e+00 948.0
2 TraesCS2A01G459400 chr2A 80.302 995 129 37 1085 2033 706489332 706488359 0.000000e+00 689.0
3 TraesCS2A01G459400 chr2A 80.471 594 47 30 214 765 706490316 706489750 1.080000e-104 390.0
4 TraesCS2A01G459400 chr2A 93.117 247 14 1 765 1008 706489715 706489469 3.060000e-95 359.0
5 TraesCS2A01G459400 chr2A 77.620 563 69 33 2684 3215 706529300 706528764 4.070000e-74 289.0
6 TraesCS2A01G459400 chr2A 88.177 203 21 2 2234 2433 604868685 604868483 4.160000e-59 239.0
7 TraesCS2A01G459400 chr2A 88.462 52 6 0 2468 2519 249748330 249748279 2.680000e-06 63.9
8 TraesCS2A01G459400 chr2B 90.656 1006 70 11 1052 2042 679071626 679070630 0.000000e+00 1315.0
9 TraesCS2A01G459400 chr2B 86.965 982 73 17 1082 2034 679696567 679697522 0.000000e+00 1053.0
10 TraesCS2A01G459400 chr2B 80.406 985 127 43 1086 2033 679031283 679030328 0.000000e+00 689.0
11 TraesCS2A01G459400 chr2B 89.533 535 34 4 1519 2034 679743784 679744315 0.000000e+00 658.0
12 TraesCS2A01G459400 chr2B 81.913 575 59 29 207 765 679032252 679031707 8.200000e-121 444.0
13 TraesCS2A01G459400 chr2B 84.116 447 49 7 1082 1528 679730096 679730520 2.310000e-111 412.0
14 TraesCS2A01G459400 chr2B 83.002 453 49 19 2550 2992 679070180 679069746 5.040000e-103 385.0
15 TraesCS2A01G459400 chr2B 93.625 251 13 1 765 1012 679031672 679031422 3.930000e-99 372.0
16 TraesCS2A01G459400 chr2B 85.079 382 26 11 408 765 679072340 679071966 8.500000e-96 361.0
17 TraesCS2A01G459400 chr2B 81.336 434 72 7 2514 2942 679304310 679303881 8.560000e-91 344.0
18 TraesCS2A01G459400 chr2B 86.254 291 21 10 765 1054 679071930 679071658 6.760000e-77 298.0
19 TraesCS2A01G459400 chr2B 87.600 250 27 2 2976 3223 679069093 679068846 1.460000e-73 287.0
20 TraesCS2A01G459400 chr2B 80.804 224 30 8 409 631 679306168 679305957 2.570000e-36 163.0
21 TraesCS2A01G459400 chr2B 83.708 178 20 5 455 631 679694241 679694410 3.330000e-35 159.0
22 TraesCS2A01G459400 chr2B 75.740 338 49 24 2893 3215 679745658 679745977 4.340000e-29 139.0
23 TraesCS2A01G459400 chr2B 74.852 338 52 24 2893 3215 679698739 679699058 4.370000e-24 122.0
24 TraesCS2A01G459400 chr2B 92.857 84 4 2 322 403 679072343 679072260 1.570000e-23 121.0
25 TraesCS2A01G459400 chr2B 90.476 84 7 1 2508 2590 679745129 679745212 3.400000e-20 110.0
26 TraesCS2A01G459400 chr2D 85.976 984 77 17 1085 2034 566656618 566655662 0.000000e+00 996.0
27 TraesCS2A01G459400 chr2D 86.934 773 41 30 763 1496 566303269 566302518 0.000000e+00 813.0
28 TraesCS2A01G459400 chr2D 80.564 993 129 38 1089 2033 566262812 566261836 0.000000e+00 706.0
29 TraesCS2A01G459400 chr2D 89.100 578 43 3 1480 2042 566302461 566301889 0.000000e+00 701.0
30 TraesCS2A01G459400 chr2D 79.530 894 141 19 1169 2042 566480725 566479854 1.650000e-167 599.0
31 TraesCS2A01G459400 chr2D 81.681 595 79 9 1469 2042 558376158 558376743 4.870000e-128 468.0
32 TraesCS2A01G459400 chr2D 89.385 358 34 2 2868 3223 566300930 566300575 6.340000e-122 448.0
33 TraesCS2A01G459400 chr2D 85.398 452 35 17 321 765 566263667 566263240 1.060000e-119 440.0
34 TraesCS2A01G459400 chr2D 85.572 402 48 7 2 400 566303971 566303577 2.310000e-111 412.0
35 TraesCS2A01G459400 chr2D 93.676 253 11 3 765 1012 566263205 566262953 1.090000e-99 374.0
36 TraesCS2A01G459400 chr2D 80.973 452 61 22 321 765 566303740 566303307 5.150000e-88 335.0
37 TraesCS2A01G459400 chr2D 86.822 258 29 3 146 400 566263758 566263503 1.890000e-72 283.0
38 TraesCS2A01G459400 chr2D 86.058 208 16 10 2232 2430 561026743 561026946 9.060000e-51 211.0
39 TraesCS2A01G459400 chr2D 92.424 66 5 0 257 322 566263758 566263693 9.520000e-16 95.3
40 TraesCS2A01G459400 chr1B 89.447 199 15 6 2231 2427 174087090 174087284 2.480000e-61 246.0
41 TraesCS2A01G459400 chr6D 88.500 200 15 6 2234 2428 374815905 374816101 5.380000e-58 235.0
42 TraesCS2A01G459400 chr1D 87.879 198 17 5 2234 2429 323497683 323497875 3.240000e-55 226.0
43 TraesCS2A01G459400 chr7B 87.129 202 19 3 2235 2429 695503681 695503480 4.190000e-54 222.0
44 TraesCS2A01G459400 chr7A 85.577 208 19 7 2230 2433 290923939 290923739 1.170000e-49 207.0
45 TraesCS2A01G459400 chr6B 86.364 198 18 8 2232 2426 632272071 632271880 1.170000e-49 207.0
46 TraesCS2A01G459400 chr1A 85.930 199 20 8 2232 2430 224803682 224803492 4.210000e-49 206.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G459400 chr2A 706508831 706512053 3222 True 5952.000000 5952 100.000000 1 3223 1 chr2A.!!$R3 3222
1 TraesCS2A01G459400 chr2A 706528764 706530460 1696 True 618.500000 948 81.448000 1085 3215 2 chr2A.!!$R5 2130
2 TraesCS2A01G459400 chr2A 706488359 706490316 1957 True 479.333333 689 84.630000 214 2033 3 chr2A.!!$R4 1819
3 TraesCS2A01G459400 chr2B 679030328 679032252 1924 True 501.666667 689 85.314667 207 2033 3 chr2B.!!$R1 1826
4 TraesCS2A01G459400 chr2B 679068846 679072343 3497 True 461.166667 1315 87.574667 322 3223 6 chr2B.!!$R2 2901
5 TraesCS2A01G459400 chr2B 679694241 679699058 4817 False 444.666667 1053 81.841667 455 3215 3 chr2B.!!$F2 2760
6 TraesCS2A01G459400 chr2B 679743784 679745977 2193 False 302.333333 658 85.249667 1519 3215 3 chr2B.!!$F3 1696
7 TraesCS2A01G459400 chr2B 679303881 679306168 2287 True 253.500000 344 81.070000 409 2942 2 chr2B.!!$R3 2533
8 TraesCS2A01G459400 chr2D 566655662 566656618 956 True 996.000000 996 85.976000 1085 2034 1 chr2D.!!$R2 949
9 TraesCS2A01G459400 chr2D 566479854 566480725 871 True 599.000000 599 79.530000 1169 2042 1 chr2D.!!$R1 873
10 TraesCS2A01G459400 chr2D 566300575 566303971 3396 True 541.800000 813 86.392800 2 3223 5 chr2D.!!$R4 3221
11 TraesCS2A01G459400 chr2D 558376158 558376743 585 False 468.000000 468 81.681000 1469 2042 1 chr2D.!!$F1 573
12 TraesCS2A01G459400 chr2D 566261836 566263758 1922 True 379.660000 706 87.776800 146 2033 5 chr2D.!!$R3 1887

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.179936 GGCTTGCTAGTGGCTCTCAT 59.820 55.000 0.0 0.0 42.39 2.90 F
1012 2736 1.063972 CACTGCCAAACACCACACG 59.936 57.895 0.0 0.0 0.00 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1015 2739 0.031314 CGGGATGAGAGATCGGTGTG 59.969 60.0 0.0 0.0 0.0 3.82 R
2298 4860 0.029300 GACAAGCACACACGCAACAT 59.971 50.0 0.0 0.0 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.303135 CGATGCCTAGCCCGCCTA 61.303 66.667 0.00 0.00 0.00 3.93
67 68 2.401967 GCATGAGGCTTGCTAGTGG 58.598 57.895 3.93 0.00 40.25 4.00
74 75 0.179936 GGCTTGCTAGTGGCTCTCAT 59.820 55.000 0.00 0.00 42.39 2.90
75 76 1.407989 GGCTTGCTAGTGGCTCTCATT 60.408 52.381 0.00 0.00 42.39 2.57
99 102 4.695217 TTTTAATGTCAACTCGGGATGC 57.305 40.909 0.00 0.00 0.00 3.91
101 104 4.746535 TTAATGTCAACTCGGGATGCTA 57.253 40.909 0.00 0.00 0.00 3.49
108 111 1.535833 ACTCGGGATGCTAGTATCCG 58.464 55.000 27.42 22.62 46.19 4.18
109 112 1.202903 ACTCGGGATGCTAGTATCCGT 60.203 52.381 27.42 19.26 46.19 4.69
117 120 2.888594 TGCTAGTATCCGTGAGTTTGC 58.111 47.619 0.00 0.00 0.00 3.68
121 124 4.033014 GCTAGTATCCGTGAGTTTGCTTTC 59.967 45.833 0.00 0.00 0.00 2.62
122 125 3.335579 AGTATCCGTGAGTTTGCTTTCC 58.664 45.455 0.00 0.00 0.00 3.13
126 129 3.020984 TCCGTGAGTTTGCTTTCCTTTT 58.979 40.909 0.00 0.00 0.00 2.27
159 162 9.342308 CACCATGTCATATAGTACTCCAAAATT 57.658 33.333 0.00 0.00 0.00 1.82
160 163 9.342308 ACCATGTCATATAGTACTCCAAAATTG 57.658 33.333 0.00 0.00 0.00 2.32
175 178 9.226606 ACTCCAAAATTGATTAGACGTTAATCA 57.773 29.630 19.94 19.94 40.82 2.57
180 183 8.547091 AAATTGATTAGACGTTAATCATTGCG 57.453 30.769 22.35 0.00 41.74 4.85
183 186 6.876804 TGATTAGACGTTAATCATTGCGATG 58.123 36.000 19.94 7.70 38.55 3.84
224 229 2.628657 AGTACTCCGAATGCAGTATCCC 59.371 50.000 0.00 0.00 0.00 3.85
225 230 1.794714 ACTCCGAATGCAGTATCCCT 58.205 50.000 0.00 0.00 0.00 4.20
266 274 7.553504 TGCACCATGTAATATAGTACTCCAT 57.446 36.000 11.32 0.00 0.00 3.41
267 275 7.386059 TGCACCATGTAATATAGTACTCCATG 58.614 38.462 11.32 7.00 0.00 3.66
345 354 4.640789 TTTTTGCACCGTGTCATTTACT 57.359 36.364 0.00 0.00 0.00 2.24
346 355 5.752892 TTTTTGCACCGTGTCATTTACTA 57.247 34.783 0.00 0.00 0.00 1.82
347 356 4.735662 TTTGCACCGTGTCATTTACTAC 57.264 40.909 0.00 0.00 0.00 2.73
348 357 3.671008 TGCACCGTGTCATTTACTACT 57.329 42.857 0.00 0.00 0.00 2.57
349 358 3.581755 TGCACCGTGTCATTTACTACTC 58.418 45.455 0.00 0.00 0.00 2.59
350 359 2.928116 GCACCGTGTCATTTACTACTCC 59.072 50.000 0.00 0.00 0.00 3.85
351 360 3.615592 GCACCGTGTCATTTACTACTCCA 60.616 47.826 0.00 0.00 0.00 3.86
352 361 4.174009 CACCGTGTCATTTACTACTCCAG 58.826 47.826 0.00 0.00 0.00 3.86
353 362 4.082408 CACCGTGTCATTTACTACTCCAGA 60.082 45.833 0.00 0.00 0.00 3.86
354 363 4.525487 ACCGTGTCATTTACTACTCCAGAA 59.475 41.667 0.00 0.00 0.00 3.02
355 364 5.187186 ACCGTGTCATTTACTACTCCAGAAT 59.813 40.000 0.00 0.00 0.00 2.40
356 365 5.749109 CCGTGTCATTTACTACTCCAGAATC 59.251 44.000 0.00 0.00 0.00 2.52
357 366 5.455849 CGTGTCATTTACTACTCCAGAATCG 59.544 44.000 0.00 0.00 0.00 3.34
358 367 6.561614 GTGTCATTTACTACTCCAGAATCGA 58.438 40.000 0.00 0.00 0.00 3.59
359 368 7.203910 GTGTCATTTACTACTCCAGAATCGAT 58.796 38.462 0.00 0.00 0.00 3.59
360 369 7.707035 GTGTCATTTACTACTCCAGAATCGATT 59.293 37.037 11.20 11.20 0.00 3.34
361 370 8.909923 TGTCATTTACTACTCCAGAATCGATTA 58.090 33.333 11.38 0.00 0.00 1.75
362 371 9.400638 GTCATTTACTACTCCAGAATCGATTAG 57.599 37.037 11.38 7.37 0.00 1.73
363 372 9.350951 TCATTTACTACTCCAGAATCGATTAGA 57.649 33.333 11.38 7.65 0.00 2.10
364 373 9.400638 CATTTACTACTCCAGAATCGATTAGAC 57.599 37.037 11.38 0.00 0.00 2.59
365 374 8.515695 TTTACTACTCCAGAATCGATTAGACA 57.484 34.615 11.38 0.00 0.00 3.41
366 375 8.693120 TTACTACTCCAGAATCGATTAGACAT 57.307 34.615 11.38 0.00 0.00 3.06
367 376 7.589958 ACTACTCCAGAATCGATTAGACATT 57.410 36.000 11.38 0.00 0.00 2.71
368 377 8.693120 ACTACTCCAGAATCGATTAGACATTA 57.307 34.615 11.38 0.00 0.00 1.90
369 378 9.132923 ACTACTCCAGAATCGATTAGACATTAA 57.867 33.333 11.38 0.00 0.00 1.40
372 381 9.265901 ACTCCAGAATCGATTAGACATTAATTG 57.734 33.333 11.38 0.00 0.00 2.32
373 382 9.265901 CTCCAGAATCGATTAGACATTAATTGT 57.734 33.333 11.38 0.00 42.79 2.71
374 383 9.613428 TCCAGAATCGATTAGACATTAATTGTT 57.387 29.630 11.38 0.00 39.18 2.83
375 384 9.655769 CCAGAATCGATTAGACATTAATTGTTG 57.344 33.333 11.38 0.00 39.18 3.33
376 385 9.162793 CAGAATCGATTAGACATTAATTGTTGC 57.837 33.333 11.38 0.00 39.18 4.17
377 386 8.064222 AGAATCGATTAGACATTAATTGTTGCG 58.936 33.333 11.38 0.00 39.18 4.85
378 387 6.895607 TCGATTAGACATTAATTGTTGCGA 57.104 33.333 0.00 0.00 39.18 5.10
379 388 7.477144 TCGATTAGACATTAATTGTTGCGAT 57.523 32.000 0.00 0.00 39.18 4.58
380 389 8.582433 TCGATTAGACATTAATTGTTGCGATA 57.418 30.769 0.00 0.00 39.18 2.92
381 390 9.203421 TCGATTAGACATTAATTGTTGCGATAT 57.797 29.630 0.00 0.00 39.18 1.63
387 396 9.283768 AGACATTAATTGTTGCGATATAATCCA 57.716 29.630 0.00 0.00 39.18 3.41
388 397 9.891828 GACATTAATTGTTGCGATATAATCCAA 57.108 29.630 0.00 0.00 39.18 3.53
447 456 9.856488 TCATATAGTACTCCAAAATCGATTAGC 57.144 33.333 11.83 0.00 0.00 3.09
448 457 9.862371 CATATAGTACTCCAAAATCGATTAGCT 57.138 33.333 11.83 0.00 0.00 3.32
451 460 6.750148 AGTACTCCAAAATCGATTAGCTAGG 58.250 40.000 11.83 9.14 0.00 3.02
452 461 5.871396 ACTCCAAAATCGATTAGCTAGGA 57.129 39.130 11.83 12.61 0.00 2.94
597 618 6.613679 TGGATGGGCGGATACTATTGAATATA 59.386 38.462 0.00 0.00 0.00 0.86
598 619 7.292356 TGGATGGGCGGATACTATTGAATATAT 59.708 37.037 0.00 0.00 0.00 0.86
627 648 6.663093 ACCAATGAATTTAGTGGTTGCATCTA 59.337 34.615 15.80 0.00 45.92 1.98
634 655 9.860898 GAATTTAGTGGTTGCATCTATTTTCTT 57.139 29.630 0.00 0.00 0.00 2.52
653 674 7.945033 TTTCTTGATGAACAATAAAACAGCC 57.055 32.000 0.00 0.00 37.88 4.85
674 711 7.064847 ACAGCCAACAAATAATGCACATAAATG 59.935 33.333 0.00 0.00 0.00 2.32
689 726 8.523523 GCACATAAATGCAGCATGATATTTTA 57.476 30.769 9.18 3.85 45.39 1.52
837 2526 1.689813 GACCCCAAATTTGTTTCGGGT 59.310 47.619 26.67 26.67 40.88 5.28
1008 2732 2.439338 ACGCACTGCCAAACACCA 60.439 55.556 0.00 0.00 0.00 4.17
1009 2733 2.026014 CGCACTGCCAAACACCAC 59.974 61.111 0.00 0.00 0.00 4.16
1010 2734 2.769539 CGCACTGCCAAACACCACA 61.770 57.895 0.00 0.00 0.00 4.17
1011 2735 1.226945 GCACTGCCAAACACCACAC 60.227 57.895 0.00 0.00 0.00 3.82
1012 2736 1.063972 CACTGCCAAACACCACACG 59.936 57.895 0.00 0.00 0.00 4.49
1013 2737 2.118404 ACTGCCAAACACCACACGG 61.118 57.895 0.00 0.00 38.77 4.94
1014 2738 3.483235 CTGCCAAACACCACACGGC 62.483 63.158 0.00 0.00 43.28 5.68
1015 2739 4.279043 GCCAAACACCACACGGCC 62.279 66.667 0.00 0.00 36.73 6.13
1016 2740 2.830827 CCAAACACCACACGGCCA 60.831 61.111 2.24 0.00 34.57 5.36
1032 2757 0.249657 GCCACACCGATCTCTCATCC 60.250 60.000 0.00 0.00 0.00 3.51
1048 2825 0.970937 ATCCCGTCTTCTCTCGGCAA 60.971 55.000 0.00 0.00 44.63 4.52
1050 2827 0.108138 CCCGTCTTCTCTCGGCAAAT 60.108 55.000 0.00 0.00 44.63 2.32
1068 2851 2.125633 GACGGCCGAGAAAGGGAC 60.126 66.667 35.90 7.18 0.00 4.46
1074 2857 1.885163 GCCGAGAAAGGGACGAGGAA 61.885 60.000 0.00 0.00 0.00 3.36
1083 2905 0.743345 GGGACGAGGAAAATGACGGG 60.743 60.000 0.00 0.00 0.00 5.28
1231 3095 1.292541 GGAGAAACGGCTCGACCTT 59.707 57.895 1.50 0.00 35.74 3.50
1297 3169 5.193679 TCTGTTCTTCCGATCACTAGATGA 58.806 41.667 0.00 0.00 43.13 2.92
1391 3277 1.482593 GTGGTTCCTGTCCGAGATGAT 59.517 52.381 0.00 0.00 0.00 2.45
1516 3487 2.271800 GCACTGGGATTACAGAGTTCG 58.728 52.381 0.00 0.00 40.97 3.95
1581 3568 5.701029 AAAATCTTGTTTTTGTGCAGTCG 57.299 34.783 0.00 0.00 0.00 4.18
1772 3783 1.141881 CATCGTCCTCCTCGTTGGG 59.858 63.158 0.00 0.00 36.20 4.12
1971 3983 4.077184 CCCAGTAAGCCCGTCGCA 62.077 66.667 0.00 0.00 41.38 5.10
1973 3985 3.179265 CAGTAAGCCCGTCGCACG 61.179 66.667 2.27 2.27 41.38 5.34
2002 4014 3.010200 GGAAGAAGCCCATGATTGACT 57.990 47.619 0.00 0.00 0.00 3.41
2014 4026 4.439700 CCATGATTGACTTGAATGCTGACC 60.440 45.833 0.00 0.00 0.00 4.02
2038 4050 3.428180 CGATGAGACCGAGTGAACAAGAT 60.428 47.826 0.00 0.00 0.00 2.40
2042 4054 3.851098 AGACCGAGTGAACAAGATAAGC 58.149 45.455 0.00 0.00 0.00 3.09
2043 4055 2.930682 GACCGAGTGAACAAGATAAGCC 59.069 50.000 0.00 0.00 0.00 4.35
2044 4056 2.567615 ACCGAGTGAACAAGATAAGCCT 59.432 45.455 0.00 0.00 0.00 4.58
2045 4057 3.008049 ACCGAGTGAACAAGATAAGCCTT 59.992 43.478 0.00 0.00 0.00 4.35
2046 4058 3.619038 CCGAGTGAACAAGATAAGCCTTC 59.381 47.826 0.00 0.00 0.00 3.46
2047 4059 3.619038 CGAGTGAACAAGATAAGCCTTCC 59.381 47.826 0.00 0.00 0.00 3.46
2048 4060 3.942115 GAGTGAACAAGATAAGCCTTCCC 59.058 47.826 0.00 0.00 0.00 3.97
2049 4061 3.589288 AGTGAACAAGATAAGCCTTCCCT 59.411 43.478 0.00 0.00 0.00 4.20
2050 4062 4.043435 AGTGAACAAGATAAGCCTTCCCTT 59.957 41.667 0.00 0.00 0.00 3.95
2051 4063 4.156739 GTGAACAAGATAAGCCTTCCCTTG 59.843 45.833 13.78 13.78 39.84 3.61
2052 4064 3.372440 ACAAGATAAGCCTTCCCTTGG 57.628 47.619 17.48 5.70 38.70 3.61
2055 4067 4.089361 CAAGATAAGCCTTCCCTTGGTTT 58.911 43.478 9.58 0.00 32.80 3.27
2056 4068 5.222254 ACAAGATAAGCCTTCCCTTGGTTTA 60.222 40.000 17.48 0.00 38.70 2.01
2058 4070 6.841781 AGATAAGCCTTCCCTTGGTTTATA 57.158 37.500 0.00 0.00 39.78 0.98
2059 4071 6.842676 AGATAAGCCTTCCCTTGGTTTATAG 58.157 40.000 0.00 0.00 39.78 1.31
2060 4072 3.953542 AGCCTTCCCTTGGTTTATAGG 57.046 47.619 0.00 0.00 0.00 2.57
2069 4631 7.891712 CTTCCCTTGGTTTATAGGGTAGAAAAA 59.108 37.037 7.77 0.00 46.52 1.94
2072 4634 7.837187 CCCTTGGTTTATAGGGTAGAAAAATCA 59.163 37.037 0.00 0.00 45.12 2.57
2073 4635 9.421399 CCTTGGTTTATAGGGTAGAAAAATCAT 57.579 33.333 0.00 0.00 0.00 2.45
2097 4659 9.993454 CATAGAAATAGAGGAAATGAGATGACA 57.007 33.333 0.00 0.00 0.00 3.58
2107 4669 8.682936 AGGAAATGAGATGACATATACAAACC 57.317 34.615 0.00 0.00 0.00 3.27
2108 4670 8.497745 AGGAAATGAGATGACATATACAAACCT 58.502 33.333 0.00 0.00 0.00 3.50
2109 4671 9.778741 GGAAATGAGATGACATATACAAACCTA 57.221 33.333 0.00 0.00 0.00 3.08
2146 4708 8.785329 AGAAAAGGAGATAATCTTTGAGTCAC 57.215 34.615 0.00 0.00 33.96 3.67
2147 4709 8.378565 AGAAAAGGAGATAATCTTTGAGTCACA 58.621 33.333 0.00 0.00 33.96 3.58
2148 4710 9.171877 GAAAAGGAGATAATCTTTGAGTCACAT 57.828 33.333 0.00 0.00 33.96 3.21
2149 4711 8.729805 AAAGGAGATAATCTTTGAGTCACATC 57.270 34.615 0.00 0.00 32.63 3.06
2150 4712 7.429374 AGGAGATAATCTTTGAGTCACATCA 57.571 36.000 0.00 0.00 0.00 3.07
2151 4713 8.032045 AGGAGATAATCTTTGAGTCACATCAT 57.968 34.615 0.00 0.00 0.00 2.45
2152 4714 9.152327 AGGAGATAATCTTTGAGTCACATCATA 57.848 33.333 0.00 0.00 0.00 2.15
2187 4749 9.944376 TTTTCATTGAGTCTAAGCTAGTAATGT 57.056 29.630 0.00 0.00 0.00 2.71
2188 4750 9.944376 TTTCATTGAGTCTAAGCTAGTAATGTT 57.056 29.630 0.00 0.00 0.00 2.71
2189 4751 9.944376 TTCATTGAGTCTAAGCTAGTAATGTTT 57.056 29.630 0.00 0.00 0.00 2.83
2218 4780 9.816787 TTTCCTATGTTTATAAACCAAAGGTCT 57.183 29.630 25.08 8.55 38.11 3.85
2220 4782 8.832735 TCCTATGTTTATAAACCAAAGGTCTCT 58.167 33.333 25.08 6.27 38.11 3.10
2229 4791 6.835819 AAACCAAAGGTCTCTAAAATAGGC 57.164 37.500 0.00 0.00 33.12 3.93
2230 4792 5.780958 ACCAAAGGTCTCTAAAATAGGCT 57.219 39.130 0.00 0.00 0.00 4.58
2231 4793 6.140968 ACCAAAGGTCTCTAAAATAGGCTT 57.859 37.500 0.00 0.00 0.00 4.35
2232 4794 5.946377 ACCAAAGGTCTCTAAAATAGGCTTG 59.054 40.000 0.00 0.00 0.00 4.01
2233 4795 5.946377 CCAAAGGTCTCTAAAATAGGCTTGT 59.054 40.000 0.00 0.00 0.00 3.16
2234 4796 6.434340 CCAAAGGTCTCTAAAATAGGCTTGTT 59.566 38.462 0.00 0.00 0.00 2.83
2235 4797 7.308435 CAAAGGTCTCTAAAATAGGCTTGTTG 58.692 38.462 0.00 0.00 0.00 3.33
2236 4798 6.128138 AGGTCTCTAAAATAGGCTTGTTGT 57.872 37.500 0.00 0.00 0.00 3.32
2237 4799 5.940470 AGGTCTCTAAAATAGGCTTGTTGTG 59.060 40.000 0.00 0.00 0.00 3.33
2238 4800 5.392057 GGTCTCTAAAATAGGCTTGTTGTGC 60.392 44.000 0.00 0.00 0.00 4.57
2239 4801 4.391830 TCTCTAAAATAGGCTTGTTGTGCG 59.608 41.667 0.00 0.00 0.00 5.34
2240 4802 4.069304 TCTAAAATAGGCTTGTTGTGCGT 58.931 39.130 0.00 0.00 0.00 5.24
2241 4803 2.704725 AAATAGGCTTGTTGTGCGTG 57.295 45.000 0.00 0.00 0.00 5.34
2242 4804 0.240945 AATAGGCTTGTTGTGCGTGC 59.759 50.000 0.00 0.00 0.00 5.34
2243 4805 1.911293 ATAGGCTTGTTGTGCGTGCG 61.911 55.000 0.00 0.00 0.00 5.34
2244 4806 4.250431 GGCTTGTTGTGCGTGCGT 62.250 61.111 0.00 0.00 0.00 5.24
2245 4807 3.018428 GCTTGTTGTGCGTGCGTG 61.018 61.111 0.00 0.00 0.00 5.34
2246 4808 2.403186 CTTGTTGTGCGTGCGTGT 59.597 55.556 0.00 0.00 0.00 4.49
2247 4809 1.933997 CTTGTTGTGCGTGCGTGTG 60.934 57.895 0.00 0.00 0.00 3.82
2248 4810 2.576287 CTTGTTGTGCGTGCGTGTGT 62.576 55.000 0.00 0.00 0.00 3.72
2249 4811 2.647481 GTTGTGCGTGCGTGTGTG 60.647 61.111 0.00 0.00 0.00 3.82
2250 4812 3.121676 TTGTGCGTGCGTGTGTGT 61.122 55.556 0.00 0.00 0.00 3.72
2251 4813 3.374087 TTGTGCGTGCGTGTGTGTG 62.374 57.895 0.00 0.00 0.00 3.82
2252 4814 3.860125 GTGCGTGCGTGTGTGTGT 61.860 61.111 0.00 0.00 0.00 3.72
2253 4815 3.858989 TGCGTGCGTGTGTGTGTG 61.859 61.111 0.00 0.00 0.00 3.82
2254 4816 3.860125 GCGTGCGTGTGTGTGTGT 61.860 61.111 0.00 0.00 0.00 3.72
2255 4817 2.319707 CGTGCGTGTGTGTGTGTC 59.680 61.111 0.00 0.00 0.00 3.67
2256 4818 2.164663 CGTGCGTGTGTGTGTGTCT 61.165 57.895 0.00 0.00 0.00 3.41
2257 4819 1.348250 GTGCGTGTGTGTGTGTCTG 59.652 57.895 0.00 0.00 0.00 3.51
2258 4820 1.079474 TGCGTGTGTGTGTGTCTGT 60.079 52.632 0.00 0.00 0.00 3.41
2259 4821 1.348250 GCGTGTGTGTGTGTCTGTG 59.652 57.895 0.00 0.00 0.00 3.66
2260 4822 1.358725 GCGTGTGTGTGTGTCTGTGT 61.359 55.000 0.00 0.00 0.00 3.72
2261 4823 0.369931 CGTGTGTGTGTGTCTGTGTG 59.630 55.000 0.00 0.00 0.00 3.82
2262 4824 1.438651 GTGTGTGTGTGTCTGTGTGT 58.561 50.000 0.00 0.00 0.00 3.72
2263 4825 1.804151 GTGTGTGTGTGTCTGTGTGTT 59.196 47.619 0.00 0.00 0.00 3.32
2264 4826 1.803555 TGTGTGTGTGTCTGTGTGTTG 59.196 47.619 0.00 0.00 0.00 3.33
2265 4827 1.130373 GTGTGTGTGTCTGTGTGTTGG 59.870 52.381 0.00 0.00 0.00 3.77
2266 4828 0.732571 GTGTGTGTCTGTGTGTTGGG 59.267 55.000 0.00 0.00 0.00 4.12
2267 4829 1.029408 TGTGTGTCTGTGTGTTGGGC 61.029 55.000 0.00 0.00 0.00 5.36
2268 4830 0.748005 GTGTGTCTGTGTGTTGGGCT 60.748 55.000 0.00 0.00 0.00 5.19
2269 4831 0.034574 TGTGTCTGTGTGTTGGGCTT 60.035 50.000 0.00 0.00 0.00 4.35
2270 4832 0.381801 GTGTCTGTGTGTTGGGCTTG 59.618 55.000 0.00 0.00 0.00 4.01
2271 4833 0.034574 TGTCTGTGTGTTGGGCTTGT 60.035 50.000 0.00 0.00 0.00 3.16
2272 4834 1.102978 GTCTGTGTGTTGGGCTTGTT 58.897 50.000 0.00 0.00 0.00 2.83
2273 4835 1.102154 TCTGTGTGTTGGGCTTGTTG 58.898 50.000 0.00 0.00 0.00 3.33
2274 4836 0.817013 CTGTGTGTTGGGCTTGTTGT 59.183 50.000 0.00 0.00 0.00 3.32
2275 4837 0.529833 TGTGTGTTGGGCTTGTTGTG 59.470 50.000 0.00 0.00 0.00 3.33
2276 4838 0.530288 GTGTGTTGGGCTTGTTGTGT 59.470 50.000 0.00 0.00 0.00 3.72
2277 4839 1.067213 GTGTGTTGGGCTTGTTGTGTT 60.067 47.619 0.00 0.00 0.00 3.32
2278 4840 1.067283 TGTGTTGGGCTTGTTGTGTTG 60.067 47.619 0.00 0.00 0.00 3.33
2279 4841 1.067213 GTGTTGGGCTTGTTGTGTTGT 60.067 47.619 0.00 0.00 0.00 3.32
2280 4842 1.067283 TGTTGGGCTTGTTGTGTTGTG 60.067 47.619 0.00 0.00 0.00 3.33
2281 4843 0.108424 TTGGGCTTGTTGTGTTGTGC 60.108 50.000 0.00 0.00 0.00 4.57
2282 4844 1.227234 GGGCTTGTTGTGTTGTGCC 60.227 57.895 0.00 0.00 39.61 5.01
2283 4845 1.227234 GGCTTGTTGTGTTGTGCCC 60.227 57.895 0.00 0.00 34.81 5.36
2284 4846 1.515020 GCTTGTTGTGTTGTGCCCA 59.485 52.632 0.00 0.00 0.00 5.36
2285 4847 0.805711 GCTTGTTGTGTTGTGCCCAC 60.806 55.000 0.00 0.00 0.00 4.61
2286 4848 0.529833 CTTGTTGTGTTGTGCCCACA 59.470 50.000 0.00 0.00 40.87 4.17
2287 4849 0.529833 TTGTTGTGTTGTGCCCACAG 59.470 50.000 1.02 0.00 43.19 3.66
2288 4850 1.226945 GTTGTGTTGTGCCCACAGC 60.227 57.895 8.11 8.11 43.19 4.40
2289 4851 1.379710 TTGTGTTGTGCCCACAGCT 60.380 52.632 14.73 0.00 43.19 4.24
2290 4852 0.106967 TTGTGTTGTGCCCACAGCTA 60.107 50.000 14.73 3.58 43.19 3.32
2291 4853 0.106967 TGTGTTGTGCCCACAGCTAA 60.107 50.000 14.73 2.60 42.94 3.09
2292 4854 1.028905 GTGTTGTGCCCACAGCTAAA 58.971 50.000 14.73 0.00 42.94 1.85
2293 4855 1.028905 TGTTGTGCCCACAGCTAAAC 58.971 50.000 14.73 5.32 42.94 2.01
2294 4856 0.313987 GTTGTGCCCACAGCTAAACC 59.686 55.000 7.84 0.00 42.94 3.27
2295 4857 0.825840 TTGTGCCCACAGCTAAACCC 60.826 55.000 1.02 0.00 42.94 4.11
2296 4858 1.074951 GTGCCCACAGCTAAACCCT 59.925 57.895 0.00 0.00 44.23 4.34
2297 4859 0.539669 GTGCCCACAGCTAAACCCTT 60.540 55.000 0.00 0.00 44.23 3.95
2298 4860 1.068948 TGCCCACAGCTAAACCCTTA 58.931 50.000 0.00 0.00 44.23 2.69
2299 4861 1.638589 TGCCCACAGCTAAACCCTTAT 59.361 47.619 0.00 0.00 44.23 1.73
2300 4862 2.024414 GCCCACAGCTAAACCCTTATG 58.976 52.381 0.00 0.00 38.99 1.90
2301 4863 2.620627 GCCCACAGCTAAACCCTTATGT 60.621 50.000 0.00 0.00 38.99 2.29
2302 4864 3.697166 CCCACAGCTAAACCCTTATGTT 58.303 45.455 0.00 0.00 0.00 2.71
2303 4865 3.443681 CCCACAGCTAAACCCTTATGTTG 59.556 47.826 0.00 0.00 0.00 3.33
2304 4866 3.119495 CCACAGCTAAACCCTTATGTTGC 60.119 47.826 0.00 0.00 0.00 4.17
2305 4867 2.747446 ACAGCTAAACCCTTATGTTGCG 59.253 45.455 0.00 0.00 0.00 4.85
2306 4868 2.747446 CAGCTAAACCCTTATGTTGCGT 59.253 45.455 0.00 0.00 0.00 5.24
2307 4869 2.747446 AGCTAAACCCTTATGTTGCGTG 59.253 45.455 0.00 0.00 0.00 5.34
2308 4870 2.486592 GCTAAACCCTTATGTTGCGTGT 59.513 45.455 0.00 0.00 0.00 4.49
2309 4871 3.669557 GCTAAACCCTTATGTTGCGTGTG 60.670 47.826 0.00 0.00 0.00 3.82
2310 4872 1.975660 AACCCTTATGTTGCGTGTGT 58.024 45.000 0.00 0.00 0.00 3.72
2311 4873 1.234821 ACCCTTATGTTGCGTGTGTG 58.765 50.000 0.00 0.00 0.00 3.82
2312 4874 0.109781 CCCTTATGTTGCGTGTGTGC 60.110 55.000 0.00 0.00 0.00 4.57
2313 4875 0.874390 CCTTATGTTGCGTGTGTGCT 59.126 50.000 0.00 0.00 35.36 4.40
2314 4876 1.266718 CCTTATGTTGCGTGTGTGCTT 59.733 47.619 0.00 0.00 35.36 3.91
2315 4877 2.309693 CTTATGTTGCGTGTGTGCTTG 58.690 47.619 0.00 0.00 35.36 4.01
2316 4878 1.304254 TATGTTGCGTGTGTGCTTGT 58.696 45.000 0.00 0.00 35.36 3.16
2317 4879 0.029300 ATGTTGCGTGTGTGCTTGTC 59.971 50.000 0.00 0.00 35.36 3.18
2318 4880 1.024046 TGTTGCGTGTGTGCTTGTCT 61.024 50.000 0.00 0.00 35.36 3.41
2319 4881 0.589729 GTTGCGTGTGTGCTTGTCTG 60.590 55.000 0.00 0.00 35.36 3.51
2320 4882 1.024046 TTGCGTGTGTGCTTGTCTGT 61.024 50.000 0.00 0.00 35.36 3.41
2321 4883 1.024046 TGCGTGTGTGCTTGTCTGTT 61.024 50.000 0.00 0.00 35.36 3.16
2322 4884 0.934496 GCGTGTGTGCTTGTCTGTTA 59.066 50.000 0.00 0.00 0.00 2.41
2323 4885 1.070577 GCGTGTGTGCTTGTCTGTTAG 60.071 52.381 0.00 0.00 0.00 2.34
2324 4886 2.469826 CGTGTGTGCTTGTCTGTTAGA 58.530 47.619 0.00 0.00 0.00 2.10
2325 4887 2.218759 CGTGTGTGCTTGTCTGTTAGAC 59.781 50.000 2.11 2.11 45.26 2.59
2326 4888 2.544267 GTGTGTGCTTGTCTGTTAGACC 59.456 50.000 6.52 0.00 44.44 3.85
2327 4889 2.434336 TGTGTGCTTGTCTGTTAGACCT 59.566 45.455 6.52 0.00 44.44 3.85
2328 4890 3.118408 TGTGTGCTTGTCTGTTAGACCTT 60.118 43.478 6.52 0.00 44.44 3.50
2329 4891 3.248602 GTGTGCTTGTCTGTTAGACCTTG 59.751 47.826 6.52 0.00 44.44 3.61
2330 4892 2.224314 GTGCTTGTCTGTTAGACCTTGC 59.776 50.000 6.52 8.23 44.44 4.01
2331 4893 2.158827 TGCTTGTCTGTTAGACCTTGCA 60.159 45.455 6.52 10.29 44.44 4.08
2332 4894 3.077359 GCTTGTCTGTTAGACCTTGCAT 58.923 45.455 6.52 0.00 44.44 3.96
2333 4895 3.120060 GCTTGTCTGTTAGACCTTGCATG 60.120 47.826 6.52 0.00 44.44 4.06
2334 4896 2.426522 TGTCTGTTAGACCTTGCATGC 58.573 47.619 11.82 11.82 44.44 4.06
2335 4897 1.394917 GTCTGTTAGACCTTGCATGCG 59.605 52.381 14.09 0.76 39.28 4.73
2336 4898 0.729116 CTGTTAGACCTTGCATGCGG 59.271 55.000 14.09 11.74 0.00 5.69
2337 4899 0.036164 TGTTAGACCTTGCATGCGGT 59.964 50.000 16.15 16.15 35.90 5.68
2338 4900 0.447801 GTTAGACCTTGCATGCGGTG 59.552 55.000 20.38 9.95 32.62 4.94
2339 4901 0.676466 TTAGACCTTGCATGCGGTGG 60.676 55.000 20.38 19.09 32.62 4.61
2340 4902 4.120331 GACCTTGCATGCGGTGGC 62.120 66.667 20.38 6.13 40.52 5.01
2343 4905 4.041917 CTTGCATGCGGTGGCGTT 62.042 61.111 14.09 0.00 44.10 4.84
2344 4906 4.340019 TTGCATGCGGTGGCGTTG 62.340 61.111 14.09 0.00 44.10 4.10
2347 4909 3.659092 CATGCGGTGGCGTTGTGT 61.659 61.111 0.00 0.00 44.10 3.72
2348 4910 3.659092 ATGCGGTGGCGTTGTGTG 61.659 61.111 0.00 0.00 44.10 3.82
2350 4912 2.968156 GCGGTGGCGTTGTGTGTA 60.968 61.111 0.00 0.00 0.00 2.90
2351 4913 2.322081 GCGGTGGCGTTGTGTGTAT 61.322 57.895 0.00 0.00 0.00 2.29
2352 4914 1.495509 CGGTGGCGTTGTGTGTATG 59.504 57.895 0.00 0.00 0.00 2.39
2353 4915 1.225376 CGGTGGCGTTGTGTGTATGT 61.225 55.000 0.00 0.00 0.00 2.29
2354 4916 0.237235 GGTGGCGTTGTGTGTATGTG 59.763 55.000 0.00 0.00 0.00 3.21
2355 4917 0.941542 GTGGCGTTGTGTGTATGTGT 59.058 50.000 0.00 0.00 0.00 3.72
2356 4918 1.332375 GTGGCGTTGTGTGTATGTGTT 59.668 47.619 0.00 0.00 0.00 3.32
2357 4919 2.017782 TGGCGTTGTGTGTATGTGTTT 58.982 42.857 0.00 0.00 0.00 2.83
2358 4920 2.223363 TGGCGTTGTGTGTATGTGTTTG 60.223 45.455 0.00 0.00 0.00 2.93
2359 4921 1.778591 GCGTTGTGTGTATGTGTTTGC 59.221 47.619 0.00 0.00 0.00 3.68
2360 4922 2.033363 CGTTGTGTGTATGTGTTTGCG 58.967 47.619 0.00 0.00 0.00 4.85
2361 4923 2.380660 GTTGTGTGTATGTGTTTGCGG 58.619 47.619 0.00 0.00 0.00 5.69
2362 4924 1.954927 TGTGTGTATGTGTTTGCGGA 58.045 45.000 0.00 0.00 0.00 5.54
2363 4925 2.499197 TGTGTGTATGTGTTTGCGGAT 58.501 42.857 0.00 0.00 0.00 4.18
2364 4926 2.225255 TGTGTGTATGTGTTTGCGGATG 59.775 45.455 0.00 0.00 0.00 3.51
2365 4927 1.809547 TGTGTATGTGTTTGCGGATGG 59.190 47.619 0.00 0.00 0.00 3.51
2366 4928 1.810151 GTGTATGTGTTTGCGGATGGT 59.190 47.619 0.00 0.00 0.00 3.55
2367 4929 3.004171 GTGTATGTGTTTGCGGATGGTA 58.996 45.455 0.00 0.00 0.00 3.25
2368 4930 3.004171 TGTATGTGTTTGCGGATGGTAC 58.996 45.455 0.00 0.00 0.00 3.34
2369 4931 2.489938 ATGTGTTTGCGGATGGTACT 57.510 45.000 0.00 0.00 0.00 2.73
2370 4932 2.264005 TGTGTTTGCGGATGGTACTT 57.736 45.000 0.00 0.00 0.00 2.24
2371 4933 2.577700 TGTGTTTGCGGATGGTACTTT 58.422 42.857 0.00 0.00 0.00 2.66
2372 4934 2.292016 TGTGTTTGCGGATGGTACTTTG 59.708 45.455 0.00 0.00 0.00 2.77
2373 4935 2.292292 GTGTTTGCGGATGGTACTTTGT 59.708 45.455 0.00 0.00 0.00 2.83
2374 4936 2.952978 TGTTTGCGGATGGTACTTTGTT 59.047 40.909 0.00 0.00 0.00 2.83
2375 4937 3.243234 TGTTTGCGGATGGTACTTTGTTG 60.243 43.478 0.00 0.00 0.00 3.33
2376 4938 2.552599 TGCGGATGGTACTTTGTTGA 57.447 45.000 0.00 0.00 0.00 3.18
2377 4939 2.147958 TGCGGATGGTACTTTGTTGAC 58.852 47.619 0.00 0.00 0.00 3.18
2378 4940 2.224426 TGCGGATGGTACTTTGTTGACT 60.224 45.455 0.00 0.00 0.00 3.41
2379 4941 2.812011 GCGGATGGTACTTTGTTGACTT 59.188 45.455 0.00 0.00 0.00 3.01
2380 4942 3.252458 GCGGATGGTACTTTGTTGACTTT 59.748 43.478 0.00 0.00 0.00 2.66
2381 4943 4.783242 CGGATGGTACTTTGTTGACTTTG 58.217 43.478 0.00 0.00 0.00 2.77
2382 4944 4.274950 CGGATGGTACTTTGTTGACTTTGT 59.725 41.667 0.00 0.00 0.00 2.83
2383 4945 5.519722 GGATGGTACTTTGTTGACTTTGTG 58.480 41.667 0.00 0.00 0.00 3.33
2384 4946 5.067283 GGATGGTACTTTGTTGACTTTGTGT 59.933 40.000 0.00 0.00 0.00 3.72
2385 4947 5.968528 TGGTACTTTGTTGACTTTGTGTT 57.031 34.783 0.00 0.00 0.00 3.32
2386 4948 5.945155 TGGTACTTTGTTGACTTTGTGTTC 58.055 37.500 0.00 0.00 0.00 3.18
2387 4949 5.025826 GGTACTTTGTTGACTTTGTGTTCG 58.974 41.667 0.00 0.00 0.00 3.95
2388 4950 4.091453 ACTTTGTTGACTTTGTGTTCGG 57.909 40.909 0.00 0.00 0.00 4.30
2389 4951 3.504520 ACTTTGTTGACTTTGTGTTCGGT 59.495 39.130 0.00 0.00 0.00 4.69
2390 4952 3.479505 TTGTTGACTTTGTGTTCGGTG 57.520 42.857 0.00 0.00 0.00 4.94
2391 4953 1.740585 TGTTGACTTTGTGTTCGGTGG 59.259 47.619 0.00 0.00 0.00 4.61
2392 4954 1.741145 GTTGACTTTGTGTTCGGTGGT 59.259 47.619 0.00 0.00 0.00 4.16
2393 4955 2.116827 TGACTTTGTGTTCGGTGGTT 57.883 45.000 0.00 0.00 0.00 3.67
2394 4956 1.740585 TGACTTTGTGTTCGGTGGTTG 59.259 47.619 0.00 0.00 0.00 3.77
2395 4957 0.454196 ACTTTGTGTTCGGTGGTTGC 59.546 50.000 0.00 0.00 0.00 4.17
2396 4958 0.738389 CTTTGTGTTCGGTGGTTGCT 59.262 50.000 0.00 0.00 0.00 3.91
2397 4959 1.134175 CTTTGTGTTCGGTGGTTGCTT 59.866 47.619 0.00 0.00 0.00 3.91
2398 4960 1.178276 TTGTGTTCGGTGGTTGCTTT 58.822 45.000 0.00 0.00 0.00 3.51
2399 4961 2.039818 TGTGTTCGGTGGTTGCTTTA 57.960 45.000 0.00 0.00 0.00 1.85
2400 4962 2.577700 TGTGTTCGGTGGTTGCTTTAT 58.422 42.857 0.00 0.00 0.00 1.40
2401 4963 2.952978 TGTGTTCGGTGGTTGCTTTATT 59.047 40.909 0.00 0.00 0.00 1.40
2402 4964 3.381908 TGTGTTCGGTGGTTGCTTTATTT 59.618 39.130 0.00 0.00 0.00 1.40
2403 4965 4.579340 TGTGTTCGGTGGTTGCTTTATTTA 59.421 37.500 0.00 0.00 0.00 1.40
2404 4966 5.241949 TGTGTTCGGTGGTTGCTTTATTTAT 59.758 36.000 0.00 0.00 0.00 1.40
2405 4967 6.430308 TGTGTTCGGTGGTTGCTTTATTTATA 59.570 34.615 0.00 0.00 0.00 0.98
2406 4968 7.040617 TGTGTTCGGTGGTTGCTTTATTTATAA 60.041 33.333 0.00 0.00 0.00 0.98
2407 4969 7.808856 GTGTTCGGTGGTTGCTTTATTTATAAA 59.191 33.333 0.00 0.00 0.00 1.40
2416 4978 4.155310 CTTTATTTATAAAGCGGGGCGG 57.845 45.455 8.78 0.00 41.69 6.13
2417 4979 3.488778 TTATTTATAAAGCGGGGCGGA 57.511 42.857 3.94 0.00 0.00 5.54
2418 4980 2.351706 ATTTATAAAGCGGGGCGGAA 57.648 45.000 3.94 0.00 0.00 4.30
2419 4981 1.670791 TTTATAAAGCGGGGCGGAAG 58.329 50.000 0.00 0.00 0.00 3.46
2439 5001 1.897560 CCTTTTTCGGCAAGGACTCT 58.102 50.000 2.90 0.00 43.32 3.24
2440 5002 3.053831 CCTTTTTCGGCAAGGACTCTA 57.946 47.619 2.90 0.00 43.32 2.43
2441 5003 3.408634 CCTTTTTCGGCAAGGACTCTAA 58.591 45.455 2.90 0.00 43.32 2.10
2442 5004 3.818773 CCTTTTTCGGCAAGGACTCTAAA 59.181 43.478 2.90 0.00 43.32 1.85
2443 5005 4.083271 CCTTTTTCGGCAAGGACTCTAAAG 60.083 45.833 2.90 0.00 43.32 1.85
2444 5006 2.762535 TTCGGCAAGGACTCTAAAGG 57.237 50.000 0.00 0.00 0.00 3.11
2445 5007 1.933021 TCGGCAAGGACTCTAAAGGA 58.067 50.000 0.00 0.00 0.00 3.36
2446 5008 2.253610 TCGGCAAGGACTCTAAAGGAA 58.746 47.619 0.00 0.00 0.00 3.36
2447 5009 2.635915 TCGGCAAGGACTCTAAAGGAAA 59.364 45.455 0.00 0.00 0.00 3.13
2448 5010 3.263425 TCGGCAAGGACTCTAAAGGAAAT 59.737 43.478 0.00 0.00 0.00 2.17
2449 5011 4.010349 CGGCAAGGACTCTAAAGGAAATT 58.990 43.478 0.00 0.00 0.00 1.82
2457 5019 8.437274 AGGACTCTAAAGGAAATTTCTCTGTA 57.563 34.615 17.42 10.99 32.01 2.74
2460 5022 9.930693 GACTCTAAAGGAAATTTCTCTGTAGAA 57.069 33.333 23.14 14.47 40.03 2.10
2503 5065 8.801882 ATTCTTATAGAATTCGTCCAAACCAA 57.198 30.769 0.00 0.00 41.90 3.67
2504 5066 8.624367 TTCTTATAGAATTCGTCCAAACCAAA 57.376 30.769 0.00 0.00 0.00 3.28
2505 5067 8.263940 TCTTATAGAATTCGTCCAAACCAAAG 57.736 34.615 0.00 0.00 0.00 2.77
2506 5068 5.897377 ATAGAATTCGTCCAAACCAAAGG 57.103 39.130 0.00 0.00 0.00 3.11
2507 5069 3.827722 AGAATTCGTCCAAACCAAAGGA 58.172 40.909 0.00 0.00 0.00 3.36
2508 5070 3.821033 AGAATTCGTCCAAACCAAAGGAG 59.179 43.478 0.00 0.00 33.85 3.69
2509 5071 1.975660 TTCGTCCAAACCAAAGGAGG 58.024 50.000 0.00 0.00 40.28 4.30
2510 5072 0.536460 TCGTCCAAACCAAAGGAGGC 60.536 55.000 0.00 0.00 39.13 4.70
2511 5073 1.524008 CGTCCAAACCAAAGGAGGCC 61.524 60.000 0.00 0.00 33.85 5.19
2534 5109 7.704047 GGCCTAAGATGAAAGACAAATGATTTC 59.296 37.037 0.00 8.11 34.30 2.17
2565 5560 6.698359 TTTGGAAAAGTTTTTCAAGTCGTG 57.302 33.333 19.02 0.00 46.34 4.35
2566 5561 4.170256 TGGAAAAGTTTTTCAAGTCGTGC 58.830 39.130 16.58 1.06 46.34 5.34
2600 5595 1.415200 CAGAAGGAGTAGGGGTAGCC 58.585 60.000 1.07 1.07 0.00 3.93
2619 5614 6.826741 GGTAGCCACAGAATACAAAGGATTTA 59.173 38.462 0.00 0.00 35.03 1.40
2628 5623 7.286316 CAGAATACAAAGGATTTAGGCCTCATT 59.714 37.037 9.68 0.00 35.03 2.57
2632 5627 2.794286 AGGATTTAGGCCTCATTCCCT 58.206 47.619 19.78 13.86 35.22 4.20
2635 5630 0.258774 TTTAGGCCTCATTCCCTGGC 59.741 55.000 9.68 0.00 45.42 4.85
2638 5633 2.123982 GCCTCATTCCCTGGCCAG 60.124 66.667 26.87 26.87 40.71 4.85
2674 5673 0.032515 TAGATCCGCCACTGGGAAGA 60.033 55.000 0.00 0.00 37.07 2.87
2675 5674 1.144936 GATCCGCCACTGGGAAGAG 59.855 63.158 0.00 0.00 37.07 2.85
2679 5678 3.650950 GCCACTGGGAAGAGGCCA 61.651 66.667 5.01 0.00 39.20 5.36
2682 5684 1.687612 CACTGGGAAGAGGCCACAT 59.312 57.895 5.01 0.00 0.00 3.21
2686 5688 2.670148 GGGAAGAGGCCACATCGGT 61.670 63.158 5.01 0.00 36.97 4.69
2716 5718 3.313526 GCTACAATGTTCTTCATCGCCAT 59.686 43.478 0.00 0.00 35.48 4.40
2717 5719 4.201950 GCTACAATGTTCTTCATCGCCATT 60.202 41.667 0.00 0.00 35.48 3.16
2731 5736 0.257039 GCCATTGTGGTGGAGATCCT 59.743 55.000 0.00 0.00 42.02 3.24
2759 5764 2.202987 GCCATGAGCTCCCTGTCG 60.203 66.667 12.15 0.00 38.99 4.35
2840 5854 2.753369 GCGATGCCAACCCAAATTG 58.247 52.632 0.00 0.00 0.00 2.32
2903 6229 5.293079 TGCAAATGCCTTGTTGTTTAAGAAC 59.707 36.000 2.46 0.00 41.18 3.01
2916 6242 2.902705 TAAGAACCTTCGCACACACT 57.097 45.000 0.00 0.00 0.00 3.55
2978 6310 8.383619 GCCATAAAAGCGATGTATAACATAGAG 58.616 37.037 4.59 0.00 39.27 2.43
3029 7029 1.338674 CCCGTTCCTCACTACATTGCA 60.339 52.381 0.00 0.00 0.00 4.08
3030 7030 1.732259 CCGTTCCTCACTACATTGCAC 59.268 52.381 0.00 0.00 0.00 4.57
3078 7080 5.695851 CACATAGATATGGGCTGGTTTTC 57.304 43.478 4.93 0.00 38.00 2.29
3082 7084 7.667219 CACATAGATATGGGCTGGTTTTCTAAT 59.333 37.037 4.93 0.00 38.00 1.73
3085 7087 7.149202 AGATATGGGCTGGTTTTCTAATGTA 57.851 36.000 0.00 0.00 0.00 2.29
3114 7116 6.657117 TGTAAAACAAATGATAGGCTACTGCA 59.343 34.615 0.00 0.00 41.91 4.41
3124 7133 7.539034 TGATAGGCTACTGCAATCATTACTA 57.461 36.000 0.00 0.00 37.84 1.82
3141 7150 8.221965 TCATTACTAAGAGAGAAGATGCGTTA 57.778 34.615 0.00 0.00 0.00 3.18
3148 7157 6.701145 AGAGAGAAGATGCGTTAATAGACA 57.299 37.500 0.00 0.00 0.00 3.41
3151 7160 6.810911 AGAGAAGATGCGTTAATAGACACAT 58.189 36.000 0.00 0.00 0.00 3.21
3187 7201 2.418368 ACGAGATGCAAGCCCAAATA 57.582 45.000 0.00 0.00 0.00 1.40
3190 7204 2.684881 CGAGATGCAAGCCCAAATAGTT 59.315 45.455 0.00 0.00 0.00 2.24
3202 7216 3.760684 CCCAAATAGTTGAGAAGCAAGCT 59.239 43.478 4.10 0.00 37.12 3.74
3210 7224 4.825546 TTGAGAAGCAAGCTCAAAGAAG 57.174 40.909 11.83 0.00 46.19 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.278466 CGCTGCTAGCCACTCGAG 60.278 66.667 13.29 11.84 38.18 4.04
27 28 1.227586 GAACTTAGGCGGGCTAGGC 60.228 63.158 18.64 8.00 0.00 3.93
85 86 3.305471 GGATACTAGCATCCCGAGTTGAC 60.305 52.174 10.59 0.00 38.91 3.18
86 87 2.891580 GGATACTAGCATCCCGAGTTGA 59.108 50.000 10.59 0.00 38.91 3.18
88 89 1.887198 CGGATACTAGCATCCCGAGTT 59.113 52.381 15.25 0.00 41.38 3.01
89 90 1.202903 ACGGATACTAGCATCCCGAGT 60.203 52.381 15.25 5.91 41.38 4.18
90 91 1.200252 CACGGATACTAGCATCCCGAG 59.800 57.143 15.25 5.33 41.38 4.63
91 92 1.202842 TCACGGATACTAGCATCCCGA 60.203 52.381 15.25 9.84 41.38 5.14
92 93 1.200252 CTCACGGATACTAGCATCCCG 59.800 57.143 15.25 12.75 41.38 5.14
99 102 4.567159 GGAAAGCAAACTCACGGATACTAG 59.433 45.833 0.00 0.00 0.00 2.57
101 104 3.008049 AGGAAAGCAAACTCACGGATACT 59.992 43.478 0.00 0.00 0.00 2.12
126 129 7.564793 AGTACTATATGACATGGTGCAGAAAA 58.435 34.615 0.00 0.00 0.00 2.29
128 131 6.239317 GGAGTACTATATGACATGGTGCAGAA 60.239 42.308 0.00 0.00 0.00 3.02
129 132 5.243954 GGAGTACTATATGACATGGTGCAGA 59.756 44.000 0.00 0.00 0.00 4.26
131 134 4.898861 TGGAGTACTATATGACATGGTGCA 59.101 41.667 0.00 0.00 0.00 4.57
132 135 5.468540 TGGAGTACTATATGACATGGTGC 57.531 43.478 0.00 0.00 0.00 5.01
133 136 8.908786 ATTTTGGAGTACTATATGACATGGTG 57.091 34.615 0.00 0.00 0.00 4.17
134 137 9.342308 CAATTTTGGAGTACTATATGACATGGT 57.658 33.333 0.00 0.00 0.00 3.55
135 138 9.559732 TCAATTTTGGAGTACTATATGACATGG 57.440 33.333 0.00 0.00 0.00 3.66
159 162 6.478673 ACATCGCAATGATTAACGTCTAATCA 59.521 34.615 23.20 23.20 44.82 2.57
160 163 6.877855 ACATCGCAATGATTAACGTCTAATC 58.122 36.000 16.79 16.79 34.13 1.75
168 171 7.862372 ACATTGGATTACATCGCAATGATTAAC 59.138 33.333 21.90 0.00 43.20 2.01
207 210 2.160822 CAGGGATACTGCATTCGGAG 57.839 55.000 0.00 0.00 40.97 4.63
217 220 4.388577 AAAAGGCAAACTCAGGGATACT 57.611 40.909 0.00 0.00 0.00 2.12
324 333 4.640789 AGTAAATGACACGGTGCAAAAA 57.359 36.364 8.30 0.00 0.00 1.94
325 334 4.817464 AGTAGTAAATGACACGGTGCAAAA 59.183 37.500 8.30 0.00 0.00 2.44
326 335 4.382291 AGTAGTAAATGACACGGTGCAAA 58.618 39.130 8.30 0.00 0.00 3.68
327 336 3.991773 GAGTAGTAAATGACACGGTGCAA 59.008 43.478 8.30 0.00 0.00 4.08
328 337 3.581755 GAGTAGTAAATGACACGGTGCA 58.418 45.455 8.30 7.83 0.00 4.57
329 338 2.928116 GGAGTAGTAAATGACACGGTGC 59.072 50.000 8.30 1.81 0.00 5.01
330 339 4.082408 TCTGGAGTAGTAAATGACACGGTG 60.082 45.833 6.58 6.58 0.00 4.94
331 340 4.084287 TCTGGAGTAGTAAATGACACGGT 58.916 43.478 0.00 0.00 0.00 4.83
332 341 4.713824 TCTGGAGTAGTAAATGACACGG 57.286 45.455 0.00 0.00 0.00 4.94
333 342 5.455849 CGATTCTGGAGTAGTAAATGACACG 59.544 44.000 0.00 0.00 0.00 4.49
334 343 6.561614 TCGATTCTGGAGTAGTAAATGACAC 58.438 40.000 0.00 0.00 0.00 3.67
335 344 6.769134 TCGATTCTGGAGTAGTAAATGACA 57.231 37.500 0.00 0.00 0.00 3.58
336 345 9.400638 CTAATCGATTCTGGAGTAGTAAATGAC 57.599 37.037 15.25 0.00 29.90 3.06
337 346 9.350951 TCTAATCGATTCTGGAGTAGTAAATGA 57.649 33.333 15.25 0.00 34.60 2.57
338 347 9.400638 GTCTAATCGATTCTGGAGTAGTAAATG 57.599 37.037 15.25 0.00 34.60 2.32
339 348 9.132923 TGTCTAATCGATTCTGGAGTAGTAAAT 57.867 33.333 15.25 0.00 34.60 1.40
340 349 8.515695 TGTCTAATCGATTCTGGAGTAGTAAA 57.484 34.615 15.25 0.00 34.60 2.01
341 350 8.693120 ATGTCTAATCGATTCTGGAGTAGTAA 57.307 34.615 15.25 0.00 34.60 2.24
342 351 8.693120 AATGTCTAATCGATTCTGGAGTAGTA 57.307 34.615 15.25 0.00 34.60 1.82
343 352 7.589958 AATGTCTAATCGATTCTGGAGTAGT 57.410 36.000 15.25 1.55 34.60 2.73
346 355 9.265901 CAATTAATGTCTAATCGATTCTGGAGT 57.734 33.333 15.25 0.00 0.00 3.85
347 356 9.265901 ACAATTAATGTCTAATCGATTCTGGAG 57.734 33.333 15.25 6.62 37.96 3.86
348 357 9.613428 AACAATTAATGTCTAATCGATTCTGGA 57.387 29.630 15.25 8.90 42.99 3.86
349 358 9.655769 CAACAATTAATGTCTAATCGATTCTGG 57.344 33.333 15.25 6.63 42.99 3.86
350 359 9.162793 GCAACAATTAATGTCTAATCGATTCTG 57.837 33.333 15.25 9.20 42.99 3.02
351 360 8.064222 CGCAACAATTAATGTCTAATCGATTCT 58.936 33.333 15.25 0.00 42.99 2.40
352 361 8.061857 TCGCAACAATTAATGTCTAATCGATTC 58.938 33.333 15.25 0.73 42.99 2.52
353 362 7.915508 TCGCAACAATTAATGTCTAATCGATT 58.084 30.769 16.15 16.15 42.99 3.34
354 363 7.477144 TCGCAACAATTAATGTCTAATCGAT 57.523 32.000 0.00 0.00 42.99 3.59
355 364 6.895607 TCGCAACAATTAATGTCTAATCGA 57.104 33.333 0.00 0.00 42.99 3.59
361 370 9.283768 TGGATTATATCGCAACAATTAATGTCT 57.716 29.630 0.00 0.00 42.99 3.41
362 371 9.891828 TTGGATTATATCGCAACAATTAATGTC 57.108 29.630 0.00 0.00 42.99 3.06
392 401 9.042008 CGGTGCACAAAAGAGTACTATATATTT 57.958 33.333 20.43 0.00 0.00 1.40
393 402 7.170998 GCGGTGCACAAAAGAGTACTATATATT 59.829 37.037 20.43 0.00 0.00 1.28
394 403 6.645415 GCGGTGCACAAAAGAGTACTATATAT 59.355 38.462 20.43 0.00 0.00 0.86
395 404 5.981315 GCGGTGCACAAAAGAGTACTATATA 59.019 40.000 20.43 0.00 0.00 0.86
396 405 4.809426 GCGGTGCACAAAAGAGTACTATAT 59.191 41.667 20.43 0.00 0.00 0.86
397 406 4.178540 GCGGTGCACAAAAGAGTACTATA 58.821 43.478 20.43 0.00 0.00 1.31
398 407 3.000727 GCGGTGCACAAAAGAGTACTAT 58.999 45.455 20.43 0.00 0.00 2.12
399 408 2.409975 GCGGTGCACAAAAGAGTACTA 58.590 47.619 20.43 0.00 0.00 1.82
400 409 1.226746 GCGGTGCACAAAAGAGTACT 58.773 50.000 20.43 0.00 0.00 2.73
401 410 0.110823 CGCGGTGCACAAAAGAGTAC 60.111 55.000 20.43 0.00 0.00 2.73
402 411 0.531090 ACGCGGTGCACAAAAGAGTA 60.531 50.000 20.43 0.00 0.00 2.59
403 412 1.772063 GACGCGGTGCACAAAAGAGT 61.772 55.000 20.43 13.79 0.00 3.24
411 420 2.049228 GTACTATATGACGCGGTGCAC 58.951 52.381 12.47 8.80 0.00 4.57
448 457 9.309516 GGATTATATCGCAACGATTAATTCCTA 57.690 33.333 7.88 0.00 44.59 2.94
449 458 7.822334 TGGATTATATCGCAACGATTAATTCCT 59.178 33.333 7.88 0.00 44.59 3.36
450 459 7.970384 TGGATTATATCGCAACGATTAATTCC 58.030 34.615 7.88 11.27 44.59 3.01
451 460 9.988350 ATTGGATTATATCGCAACGATTAATTC 57.012 29.630 7.88 10.50 44.59 2.17
597 618 6.350949 GCAACCACTAAATTCATTGGTACCAT 60.351 38.462 17.17 0.61 41.68 3.55
598 619 5.047660 GCAACCACTAAATTCATTGGTACCA 60.048 40.000 11.60 11.60 41.68 3.25
634 655 6.154203 TGTTGGCTGTTTTATTGTTCATCA 57.846 33.333 0.00 0.00 0.00 3.07
777 866 0.596577 CGAATCGAAGAGCCGGGATA 59.403 55.000 2.18 0.00 43.63 2.59
960 2680 4.345257 CGCCCCTATATATACCATGAAGCT 59.655 45.833 0.00 0.00 0.00 3.74
1012 2736 0.249657 GATGAGAGATCGGTGTGGCC 60.250 60.000 0.00 0.00 0.00 5.36
1013 2737 0.249657 GGATGAGAGATCGGTGTGGC 60.250 60.000 0.00 0.00 0.00 5.01
1014 2738 0.390860 GGGATGAGAGATCGGTGTGG 59.609 60.000 0.00 0.00 0.00 4.17
1015 2739 0.031314 CGGGATGAGAGATCGGTGTG 59.969 60.000 0.00 0.00 0.00 3.82
1016 2740 0.395862 ACGGGATGAGAGATCGGTGT 60.396 55.000 0.00 0.00 0.00 4.16
1048 2825 1.078426 CCCTTTCTCGGCCGTCATT 60.078 57.895 27.15 0.00 0.00 2.57
1050 2827 2.602267 TCCCTTTCTCGGCCGTCA 60.602 61.111 27.15 10.17 0.00 4.35
1054 2837 2.184579 CTCGTCCCTTTCTCGGCC 59.815 66.667 0.00 0.00 0.00 6.13
1068 2851 4.218722 CCCCCGTCATTTTCCTCG 57.781 61.111 0.00 0.00 0.00 4.63
1186 3050 3.161557 GGCACCTTGACCTCCAGT 58.838 61.111 0.00 0.00 0.00 4.00
1211 3075 2.647158 GGTCGAGCCGTTTCTCCCT 61.647 63.158 2.39 0.00 0.00 4.20
1218 3082 2.657237 CCAGAAGGTCGAGCCGTT 59.343 61.111 11.73 0.00 43.70 4.44
1297 3169 4.081917 ACCCACACGAAGAAACAAACAAAT 60.082 37.500 0.00 0.00 0.00 2.32
1414 3301 8.053355 TGATCTGCGGATATAATCTAACCTAGA 58.947 37.037 8.35 0.00 34.03 2.43
1743 3754 4.891727 GACGATGTGGCCGGCGAT 62.892 66.667 22.54 12.43 0.00 4.58
1751 3762 0.458543 CAACGAGGAGGACGATGTGG 60.459 60.000 0.00 0.00 34.70 4.17
1755 3766 2.058595 CCCCAACGAGGAGGACGAT 61.059 63.158 0.00 0.00 41.22 3.73
1772 3783 1.677637 GGACGAGGATGAGGTGGACC 61.678 65.000 0.00 0.00 0.00 4.46
1973 3985 3.808656 GCTTCTTCCCGCTGCTGC 61.809 66.667 5.34 5.34 0.00 5.25
1994 4006 3.084039 GGGTCAGCATTCAAGTCAATCA 58.916 45.455 0.00 0.00 0.00 2.57
2002 4014 0.617935 TCATCGGGGTCAGCATTCAA 59.382 50.000 0.00 0.00 0.00 2.69
2014 4026 0.179134 GTTCACTCGGTCTCATCGGG 60.179 60.000 0.00 0.00 0.00 5.14
2038 4050 5.382664 CCTATAAACCAAGGGAAGGCTTA 57.617 43.478 0.00 0.00 0.00 3.09
2047 4059 8.817092 TGATTTTTCTACCCTATAAACCAAGG 57.183 34.615 0.00 0.00 0.00 3.61
2081 4643 8.778358 GGTTTGTATATGTCATCTCATTTCCTC 58.222 37.037 0.00 0.00 0.00 3.71
2082 4644 8.497745 AGGTTTGTATATGTCATCTCATTTCCT 58.502 33.333 0.00 0.00 0.00 3.36
2083 4645 8.682936 AGGTTTGTATATGTCATCTCATTTCC 57.317 34.615 0.00 0.00 0.00 3.13
2120 4682 9.877178 GTGACTCAAAGATTATCTCCTTTTCTA 57.123 33.333 0.00 0.00 30.89 2.10
2122 4684 8.553459 TGTGACTCAAAGATTATCTCCTTTTC 57.447 34.615 0.00 0.00 30.89 2.29
2124 4686 8.324306 TGATGTGACTCAAAGATTATCTCCTTT 58.676 33.333 0.00 0.00 33.29 3.11
2125 4687 7.855375 TGATGTGACTCAAAGATTATCTCCTT 58.145 34.615 0.00 0.00 0.00 3.36
2126 4688 7.429374 TGATGTGACTCAAAGATTATCTCCT 57.571 36.000 0.00 0.00 0.00 3.69
2127 4689 9.770097 TTATGATGTGACTCAAAGATTATCTCC 57.230 33.333 0.00 0.00 0.00 3.71
2161 4723 9.944376 ACATTACTAGCTTAGACTCAATGAAAA 57.056 29.630 0.00 0.00 0.00 2.29
2162 4724 9.944376 AACATTACTAGCTTAGACTCAATGAAA 57.056 29.630 0.00 0.00 0.00 2.69
2163 4725 9.944376 AAACATTACTAGCTTAGACTCAATGAA 57.056 29.630 0.00 0.00 0.00 2.57
2192 4754 9.816787 AGACCTTTGGTTTATAAACATAGGAAA 57.183 29.630 29.85 19.14 40.63 3.13
2193 4755 9.457436 GAGACCTTTGGTTTATAAACATAGGAA 57.543 33.333 29.85 17.42 40.63 3.36
2194 4756 8.832735 AGAGACCTTTGGTTTATAAACATAGGA 58.167 33.333 29.85 14.40 40.63 2.94
2204 4766 8.336987 AGCCTATTTTAGAGACCTTTGGTTTAT 58.663 33.333 0.00 0.00 35.25 1.40
2206 4768 6.552932 AGCCTATTTTAGAGACCTTTGGTTT 58.447 36.000 0.00 0.00 35.25 3.27
2207 4769 6.140968 AGCCTATTTTAGAGACCTTTGGTT 57.859 37.500 0.00 0.00 35.25 3.67
2208 4770 5.780958 AGCCTATTTTAGAGACCTTTGGT 57.219 39.130 0.00 0.00 39.44 3.67
2209 4771 5.946377 ACAAGCCTATTTTAGAGACCTTTGG 59.054 40.000 0.00 0.00 0.00 3.28
2210 4772 7.040409 ACAACAAGCCTATTTTAGAGACCTTTG 60.040 37.037 0.00 0.00 0.00 2.77
2212 4774 6.431234 CACAACAAGCCTATTTTAGAGACCTT 59.569 38.462 0.00 0.00 0.00 3.50
2216 4778 4.391830 CGCACAACAAGCCTATTTTAGAGA 59.608 41.667 0.00 0.00 0.00 3.10
2217 4779 4.154195 ACGCACAACAAGCCTATTTTAGAG 59.846 41.667 0.00 0.00 0.00 2.43
2218 4780 4.069304 ACGCACAACAAGCCTATTTTAGA 58.931 39.130 0.00 0.00 0.00 2.10
2220 4782 3.610585 GCACGCACAACAAGCCTATTTTA 60.611 43.478 0.00 0.00 0.00 1.52
2221 4783 2.862140 GCACGCACAACAAGCCTATTTT 60.862 45.455 0.00 0.00 0.00 1.82
2222 4784 1.335872 GCACGCACAACAAGCCTATTT 60.336 47.619 0.00 0.00 0.00 1.40
2223 4785 0.240945 GCACGCACAACAAGCCTATT 59.759 50.000 0.00 0.00 0.00 1.73
2224 4786 1.875963 GCACGCACAACAAGCCTAT 59.124 52.632 0.00 0.00 0.00 2.57
2225 4787 2.603247 CGCACGCACAACAAGCCTA 61.603 57.895 0.00 0.00 0.00 3.93
2226 4788 3.952675 CGCACGCACAACAAGCCT 61.953 61.111 0.00 0.00 0.00 4.58
2227 4789 4.250431 ACGCACGCACAACAAGCC 62.250 61.111 0.00 0.00 0.00 4.35
2228 4790 3.018428 CACGCACGCACAACAAGC 61.018 61.111 0.00 0.00 0.00 4.01
2229 4791 1.933997 CACACGCACGCACAACAAG 60.934 57.895 0.00 0.00 0.00 3.16
2230 4792 2.099254 CACACGCACGCACAACAA 59.901 55.556 0.00 0.00 0.00 2.83
2231 4793 3.121676 ACACACGCACGCACAACA 61.122 55.556 0.00 0.00 0.00 3.33
2232 4794 2.647481 CACACACGCACGCACAAC 60.647 61.111 0.00 0.00 0.00 3.32
2233 4795 3.121676 ACACACACGCACGCACAA 61.122 55.556 0.00 0.00 0.00 3.33
2234 4796 3.858989 CACACACACGCACGCACA 61.859 61.111 0.00 0.00 0.00 4.57
2235 4797 3.860125 ACACACACACGCACGCAC 61.860 61.111 0.00 0.00 0.00 5.34
2236 4798 3.858989 CACACACACACGCACGCA 61.859 61.111 0.00 0.00 0.00 5.24
2237 4799 3.767066 GACACACACACACGCACGC 62.767 63.158 0.00 0.00 0.00 5.34
2238 4800 2.164663 AGACACACACACACGCACG 61.165 57.895 0.00 0.00 0.00 5.34
2239 4801 1.348250 CAGACACACACACACGCAC 59.652 57.895 0.00 0.00 0.00 5.34
2240 4802 1.079474 ACAGACACACACACACGCA 60.079 52.632 0.00 0.00 0.00 5.24
2241 4803 1.348250 CACAGACACACACACACGC 59.652 57.895 0.00 0.00 0.00 5.34
2242 4804 0.369931 CACACAGACACACACACACG 59.630 55.000 0.00 0.00 0.00 4.49
2243 4805 1.438651 ACACACAGACACACACACAC 58.561 50.000 0.00 0.00 0.00 3.82
2244 4806 1.803555 CAACACACAGACACACACACA 59.196 47.619 0.00 0.00 0.00 3.72
2245 4807 1.130373 CCAACACACAGACACACACAC 59.870 52.381 0.00 0.00 0.00 3.82
2246 4808 1.447945 CCAACACACAGACACACACA 58.552 50.000 0.00 0.00 0.00 3.72
2247 4809 0.732571 CCCAACACACAGACACACAC 59.267 55.000 0.00 0.00 0.00 3.82
2248 4810 1.029408 GCCCAACACACAGACACACA 61.029 55.000 0.00 0.00 0.00 3.72
2249 4811 0.748005 AGCCCAACACACAGACACAC 60.748 55.000 0.00 0.00 0.00 3.82
2250 4812 0.034574 AAGCCCAACACACAGACACA 60.035 50.000 0.00 0.00 0.00 3.72
2251 4813 0.381801 CAAGCCCAACACACAGACAC 59.618 55.000 0.00 0.00 0.00 3.67
2252 4814 0.034574 ACAAGCCCAACACACAGACA 60.035 50.000 0.00 0.00 0.00 3.41
2253 4815 1.102978 AACAAGCCCAACACACAGAC 58.897 50.000 0.00 0.00 0.00 3.51
2254 4816 1.102154 CAACAAGCCCAACACACAGA 58.898 50.000 0.00 0.00 0.00 3.41
2255 4817 0.817013 ACAACAAGCCCAACACACAG 59.183 50.000 0.00 0.00 0.00 3.66
2256 4818 0.529833 CACAACAAGCCCAACACACA 59.470 50.000 0.00 0.00 0.00 3.72
2257 4819 0.530288 ACACAACAAGCCCAACACAC 59.470 50.000 0.00 0.00 0.00 3.82
2258 4820 1.067283 CAACACAACAAGCCCAACACA 60.067 47.619 0.00 0.00 0.00 3.72
2259 4821 1.067213 ACAACACAACAAGCCCAACAC 60.067 47.619 0.00 0.00 0.00 3.32
2260 4822 1.067283 CACAACACAACAAGCCCAACA 60.067 47.619 0.00 0.00 0.00 3.33
2261 4823 1.639280 CACAACACAACAAGCCCAAC 58.361 50.000 0.00 0.00 0.00 3.77
2262 4824 0.108424 GCACAACACAACAAGCCCAA 60.108 50.000 0.00 0.00 0.00 4.12
2263 4825 1.515020 GCACAACACAACAAGCCCA 59.485 52.632 0.00 0.00 0.00 5.36
2264 4826 1.227234 GGCACAACACAACAAGCCC 60.227 57.895 0.00 0.00 36.17 5.19
2265 4827 1.227234 GGGCACAACACAACAAGCC 60.227 57.895 0.00 0.00 41.29 4.35
2266 4828 0.805711 GTGGGCACAACACAACAAGC 60.806 55.000 0.00 0.00 38.67 4.01
2267 4829 0.529833 TGTGGGCACAACACAACAAG 59.470 50.000 0.00 0.00 45.05 3.16
2268 4830 0.529833 CTGTGGGCACAACACAACAA 59.470 50.000 0.00 0.00 46.98 2.83
2269 4831 1.943116 GCTGTGGGCACAACACAACA 61.943 55.000 0.00 0.00 46.98 3.33
2270 4832 1.226945 GCTGTGGGCACAACACAAC 60.227 57.895 0.00 0.00 46.98 3.32
2271 4833 0.106967 TAGCTGTGGGCACAACACAA 60.107 50.000 0.00 0.00 46.98 3.33
2272 4834 0.106967 TTAGCTGTGGGCACAACACA 60.107 50.000 0.00 0.00 45.76 3.72
2273 4835 1.028905 TTTAGCTGTGGGCACAACAC 58.971 50.000 0.00 0.00 44.79 3.32
2274 4836 1.028905 GTTTAGCTGTGGGCACAACA 58.971 50.000 0.00 0.00 44.79 3.33
2275 4837 0.313987 GGTTTAGCTGTGGGCACAAC 59.686 55.000 0.00 0.00 44.79 3.32
2276 4838 0.825840 GGGTTTAGCTGTGGGCACAA 60.826 55.000 0.00 0.00 44.79 3.33
2277 4839 1.228429 GGGTTTAGCTGTGGGCACA 60.228 57.895 0.00 0.00 44.79 4.57
2278 4840 0.539669 AAGGGTTTAGCTGTGGGCAC 60.540 55.000 0.00 0.00 44.79 5.01
2279 4841 1.068948 TAAGGGTTTAGCTGTGGGCA 58.931 50.000 0.00 0.00 44.79 5.36
2280 4842 2.024414 CATAAGGGTTTAGCTGTGGGC 58.976 52.381 0.00 0.00 42.19 5.36
2281 4843 3.366052 ACATAAGGGTTTAGCTGTGGG 57.634 47.619 0.00 0.00 0.00 4.61
2282 4844 3.119495 GCAACATAAGGGTTTAGCTGTGG 60.119 47.826 0.00 0.00 0.00 4.17
2283 4845 3.426159 CGCAACATAAGGGTTTAGCTGTG 60.426 47.826 0.00 0.00 0.00 3.66
2284 4846 2.747446 CGCAACATAAGGGTTTAGCTGT 59.253 45.455 0.00 0.00 0.00 4.40
2285 4847 2.747446 ACGCAACATAAGGGTTTAGCTG 59.253 45.455 0.00 0.00 0.00 4.24
2286 4848 2.747446 CACGCAACATAAGGGTTTAGCT 59.253 45.455 0.00 0.00 0.00 3.32
2287 4849 2.486592 ACACGCAACATAAGGGTTTAGC 59.513 45.455 0.00 0.00 0.00 3.09
2288 4850 3.500680 ACACACGCAACATAAGGGTTTAG 59.499 43.478 0.00 0.00 0.00 1.85
2289 4851 3.251245 CACACACGCAACATAAGGGTTTA 59.749 43.478 0.00 0.00 0.00 2.01
2290 4852 2.034053 CACACACGCAACATAAGGGTTT 59.966 45.455 0.00 0.00 0.00 3.27
2291 4853 1.606668 CACACACGCAACATAAGGGTT 59.393 47.619 0.00 0.00 0.00 4.11
2292 4854 1.234821 CACACACGCAACATAAGGGT 58.765 50.000 0.00 0.00 0.00 4.34
2293 4855 0.109781 GCACACACGCAACATAAGGG 60.110 55.000 0.00 0.00 0.00 3.95
2294 4856 0.874390 AGCACACACGCAACATAAGG 59.126 50.000 0.00 0.00 0.00 2.69
2295 4857 2.286950 ACAAGCACACACGCAACATAAG 60.287 45.455 0.00 0.00 0.00 1.73
2296 4858 1.673400 ACAAGCACACACGCAACATAA 59.327 42.857 0.00 0.00 0.00 1.90
2297 4859 1.262950 GACAAGCACACACGCAACATA 59.737 47.619 0.00 0.00 0.00 2.29
2298 4860 0.029300 GACAAGCACACACGCAACAT 59.971 50.000 0.00 0.00 0.00 2.71
2299 4861 1.024046 AGACAAGCACACACGCAACA 61.024 50.000 0.00 0.00 0.00 3.33
2300 4862 0.589729 CAGACAAGCACACACGCAAC 60.590 55.000 0.00 0.00 0.00 4.17
2301 4863 1.024046 ACAGACAAGCACACACGCAA 61.024 50.000 0.00 0.00 0.00 4.85
2302 4864 1.024046 AACAGACAAGCACACACGCA 61.024 50.000 0.00 0.00 0.00 5.24
2303 4865 0.934496 TAACAGACAAGCACACACGC 59.066 50.000 0.00 0.00 0.00 5.34
2304 4866 2.218759 GTCTAACAGACAAGCACACACG 59.781 50.000 1.46 0.00 44.45 4.49
2305 4867 2.544267 GGTCTAACAGACAAGCACACAC 59.456 50.000 8.47 0.00 46.79 3.82
2306 4868 2.434336 AGGTCTAACAGACAAGCACACA 59.566 45.455 8.47 0.00 46.79 3.72
2307 4869 3.113260 AGGTCTAACAGACAAGCACAC 57.887 47.619 8.47 0.00 46.79 3.82
2308 4870 3.466836 CAAGGTCTAACAGACAAGCACA 58.533 45.455 8.47 0.00 46.79 4.57
2309 4871 2.224314 GCAAGGTCTAACAGACAAGCAC 59.776 50.000 8.47 0.00 46.79 4.40
2310 4872 2.158827 TGCAAGGTCTAACAGACAAGCA 60.159 45.455 8.47 10.79 46.79 3.91
2311 4873 2.494059 TGCAAGGTCTAACAGACAAGC 58.506 47.619 8.47 8.68 46.79 4.01
2312 4874 3.120060 GCATGCAAGGTCTAACAGACAAG 60.120 47.826 14.21 0.00 46.79 3.16
2313 4875 2.813754 GCATGCAAGGTCTAACAGACAA 59.186 45.455 14.21 0.00 46.79 3.18
2314 4876 2.426522 GCATGCAAGGTCTAACAGACA 58.573 47.619 14.21 0.00 46.79 3.41
2315 4877 1.394917 CGCATGCAAGGTCTAACAGAC 59.605 52.381 19.57 0.00 44.32 3.51
2316 4878 1.675714 CCGCATGCAAGGTCTAACAGA 60.676 52.381 19.57 0.00 0.00 3.41
2317 4879 0.729116 CCGCATGCAAGGTCTAACAG 59.271 55.000 19.57 0.00 0.00 3.16
2318 4880 0.036164 ACCGCATGCAAGGTCTAACA 59.964 50.000 19.57 0.00 35.50 2.41
2319 4881 0.447801 CACCGCATGCAAGGTCTAAC 59.552 55.000 19.57 0.00 39.00 2.34
2320 4882 0.676466 CCACCGCATGCAAGGTCTAA 60.676 55.000 19.57 0.00 39.00 2.10
2321 4883 1.078497 CCACCGCATGCAAGGTCTA 60.078 57.895 19.57 0.00 39.00 2.59
2322 4884 2.360350 CCACCGCATGCAAGGTCT 60.360 61.111 19.57 0.00 39.00 3.85
2323 4885 4.120331 GCCACCGCATGCAAGGTC 62.120 66.667 19.57 8.31 39.00 3.85
2326 4888 4.041917 AACGCCACCGCATGCAAG 62.042 61.111 19.57 10.96 38.22 4.01
2327 4889 4.340019 CAACGCCACCGCATGCAA 62.340 61.111 19.57 0.00 38.22 4.08
2330 4892 3.659092 ACACAACGCCACCGCATG 61.659 61.111 0.00 0.00 38.22 4.06
2331 4893 2.997952 TACACACAACGCCACCGCAT 62.998 55.000 0.00 0.00 38.22 4.73
2332 4894 2.997952 ATACACACAACGCCACCGCA 62.998 55.000 0.00 0.00 38.22 5.69
2333 4895 2.322081 ATACACACAACGCCACCGC 61.322 57.895 0.00 0.00 38.22 5.68
2334 4896 1.225376 ACATACACACAACGCCACCG 61.225 55.000 0.00 0.00 41.14 4.94
2335 4897 0.237235 CACATACACACAACGCCACC 59.763 55.000 0.00 0.00 0.00 4.61
2336 4898 0.941542 ACACATACACACAACGCCAC 59.058 50.000 0.00 0.00 0.00 5.01
2337 4899 1.669604 AACACATACACACAACGCCA 58.330 45.000 0.00 0.00 0.00 5.69
2338 4900 2.380660 CAAACACATACACACAACGCC 58.619 47.619 0.00 0.00 0.00 5.68
2339 4901 1.778591 GCAAACACATACACACAACGC 59.221 47.619 0.00 0.00 0.00 4.84
2340 4902 2.033363 CGCAAACACATACACACAACG 58.967 47.619 0.00 0.00 0.00 4.10
2341 4903 2.032302 TCCGCAAACACATACACACAAC 59.968 45.455 0.00 0.00 0.00 3.32
2342 4904 2.289565 TCCGCAAACACATACACACAA 58.710 42.857 0.00 0.00 0.00 3.33
2343 4905 1.954927 TCCGCAAACACATACACACA 58.045 45.000 0.00 0.00 0.00 3.72
2344 4906 2.414029 CCATCCGCAAACACATACACAC 60.414 50.000 0.00 0.00 0.00 3.82
2345 4907 1.809547 CCATCCGCAAACACATACACA 59.190 47.619 0.00 0.00 0.00 3.72
2346 4908 1.810151 ACCATCCGCAAACACATACAC 59.190 47.619 0.00 0.00 0.00 2.90
2347 4909 2.192664 ACCATCCGCAAACACATACA 57.807 45.000 0.00 0.00 0.00 2.29
2348 4910 3.267483 AGTACCATCCGCAAACACATAC 58.733 45.455 0.00 0.00 0.00 2.39
2349 4911 3.620427 AGTACCATCCGCAAACACATA 57.380 42.857 0.00 0.00 0.00 2.29
2350 4912 2.489938 AGTACCATCCGCAAACACAT 57.510 45.000 0.00 0.00 0.00 3.21
2351 4913 2.264005 AAGTACCATCCGCAAACACA 57.736 45.000 0.00 0.00 0.00 3.72
2352 4914 2.292292 ACAAAGTACCATCCGCAAACAC 59.708 45.455 0.00 0.00 0.00 3.32
2353 4915 2.577700 ACAAAGTACCATCCGCAAACA 58.422 42.857 0.00 0.00 0.00 2.83
2354 4916 3.003897 TCAACAAAGTACCATCCGCAAAC 59.996 43.478 0.00 0.00 0.00 2.93
2355 4917 3.003897 GTCAACAAAGTACCATCCGCAAA 59.996 43.478 0.00 0.00 0.00 3.68
2356 4918 2.550606 GTCAACAAAGTACCATCCGCAA 59.449 45.455 0.00 0.00 0.00 4.85
2357 4919 2.147958 GTCAACAAAGTACCATCCGCA 58.852 47.619 0.00 0.00 0.00 5.69
2358 4920 2.423577 AGTCAACAAAGTACCATCCGC 58.576 47.619 0.00 0.00 0.00 5.54
2359 4921 4.274950 ACAAAGTCAACAAAGTACCATCCG 59.725 41.667 0.00 0.00 0.00 4.18
2360 4922 5.067283 ACACAAAGTCAACAAAGTACCATCC 59.933 40.000 0.00 0.00 0.00 3.51
2361 4923 6.131544 ACACAAAGTCAACAAAGTACCATC 57.868 37.500 0.00 0.00 0.00 3.51
2362 4924 6.524101 AACACAAAGTCAACAAAGTACCAT 57.476 33.333 0.00 0.00 0.00 3.55
2363 4925 5.391097 CGAACACAAAGTCAACAAAGTACCA 60.391 40.000 0.00 0.00 0.00 3.25
2364 4926 5.025826 CGAACACAAAGTCAACAAAGTACC 58.974 41.667 0.00 0.00 0.00 3.34
2365 4927 5.025826 CCGAACACAAAGTCAACAAAGTAC 58.974 41.667 0.00 0.00 0.00 2.73
2366 4928 4.696402 ACCGAACACAAAGTCAACAAAGTA 59.304 37.500 0.00 0.00 0.00 2.24
2367 4929 3.504520 ACCGAACACAAAGTCAACAAAGT 59.495 39.130 0.00 0.00 0.00 2.66
2368 4930 3.851403 CACCGAACACAAAGTCAACAAAG 59.149 43.478 0.00 0.00 0.00 2.77
2369 4931 3.366476 CCACCGAACACAAAGTCAACAAA 60.366 43.478 0.00 0.00 0.00 2.83
2370 4932 2.162608 CCACCGAACACAAAGTCAACAA 59.837 45.455 0.00 0.00 0.00 2.83
2371 4933 1.740585 CCACCGAACACAAAGTCAACA 59.259 47.619 0.00 0.00 0.00 3.33
2372 4934 1.741145 ACCACCGAACACAAAGTCAAC 59.259 47.619 0.00 0.00 0.00 3.18
2373 4935 2.116827 ACCACCGAACACAAAGTCAA 57.883 45.000 0.00 0.00 0.00 3.18
2374 4936 1.740585 CAACCACCGAACACAAAGTCA 59.259 47.619 0.00 0.00 0.00 3.41
2375 4937 1.533129 GCAACCACCGAACACAAAGTC 60.533 52.381 0.00 0.00 0.00 3.01
2376 4938 0.454196 GCAACCACCGAACACAAAGT 59.546 50.000 0.00 0.00 0.00 2.66
2377 4939 0.738389 AGCAACCACCGAACACAAAG 59.262 50.000 0.00 0.00 0.00 2.77
2378 4940 1.178276 AAGCAACCACCGAACACAAA 58.822 45.000 0.00 0.00 0.00 2.83
2379 4941 1.178276 AAAGCAACCACCGAACACAA 58.822 45.000 0.00 0.00 0.00 3.33
2380 4942 2.039818 TAAAGCAACCACCGAACACA 57.960 45.000 0.00 0.00 0.00 3.72
2381 4943 3.636282 AATAAAGCAACCACCGAACAC 57.364 42.857 0.00 0.00 0.00 3.32
2382 4944 5.968528 ATAAATAAAGCAACCACCGAACA 57.031 34.783 0.00 0.00 0.00 3.18
2383 4945 8.389586 CTTTATAAATAAAGCAACCACCGAAC 57.610 34.615 9.01 0.00 41.69 3.95
2396 4958 3.818180 TCCGCCCCGCTTTATAAATAAA 58.182 40.909 0.00 0.00 0.00 1.40
2397 4959 3.488778 TCCGCCCCGCTTTATAAATAA 57.511 42.857 0.00 0.00 0.00 1.40
2398 4960 3.404899 CTTCCGCCCCGCTTTATAAATA 58.595 45.455 0.00 0.00 0.00 1.40
2399 4961 2.227194 CTTCCGCCCCGCTTTATAAAT 58.773 47.619 0.00 0.00 0.00 1.40
2400 4962 1.670791 CTTCCGCCCCGCTTTATAAA 58.329 50.000 0.00 0.00 0.00 1.40
2401 4963 0.816421 GCTTCCGCCCCGCTTTATAA 60.816 55.000 0.00 0.00 0.00 0.98
2402 4964 1.227734 GCTTCCGCCCCGCTTTATA 60.228 57.895 0.00 0.00 0.00 0.98
2403 4965 2.516225 GCTTCCGCCCCGCTTTAT 60.516 61.111 0.00 0.00 0.00 1.40
2420 4982 1.897560 AGAGTCCTTGCCGAAAAAGG 58.102 50.000 4.81 4.81 44.79 3.11
2421 4983 4.083271 CCTTTAGAGTCCTTGCCGAAAAAG 60.083 45.833 0.00 0.00 0.00 2.27
2422 4984 3.818773 CCTTTAGAGTCCTTGCCGAAAAA 59.181 43.478 0.00 0.00 0.00 1.94
2423 4985 3.071892 TCCTTTAGAGTCCTTGCCGAAAA 59.928 43.478 0.00 0.00 0.00 2.29
2424 4986 2.635915 TCCTTTAGAGTCCTTGCCGAAA 59.364 45.455 0.00 0.00 0.00 3.46
2425 4987 2.253610 TCCTTTAGAGTCCTTGCCGAA 58.746 47.619 0.00 0.00 0.00 4.30
2426 4988 1.933021 TCCTTTAGAGTCCTTGCCGA 58.067 50.000 0.00 0.00 0.00 5.54
2427 4989 2.762535 TTCCTTTAGAGTCCTTGCCG 57.237 50.000 0.00 0.00 0.00 5.69
2428 4990 5.712446 AGAAATTTCCTTTAGAGTCCTTGCC 59.288 40.000 14.61 0.00 0.00 4.52
2429 4991 6.657117 AGAGAAATTTCCTTTAGAGTCCTTGC 59.343 38.462 14.61 0.00 0.00 4.01
2430 4992 7.663493 ACAGAGAAATTTCCTTTAGAGTCCTTG 59.337 37.037 14.61 2.08 0.00 3.61
2431 4993 7.750655 ACAGAGAAATTTCCTTTAGAGTCCTT 58.249 34.615 14.61 0.00 0.00 3.36
2432 4994 7.323052 ACAGAGAAATTTCCTTTAGAGTCCT 57.677 36.000 14.61 0.00 0.00 3.85
2433 4995 8.532819 TCTACAGAGAAATTTCCTTTAGAGTCC 58.467 37.037 14.61 0.00 0.00 3.85
2434 4996 9.930693 TTCTACAGAGAAATTTCCTTTAGAGTC 57.069 33.333 20.08 10.19 38.80 3.36
2478 5040 8.801882 TTGGTTTGGACGAATTCTATAAGAAT 57.198 30.769 3.52 0.00 46.22 2.40
2479 5041 8.624367 TTTGGTTTGGACGAATTCTATAAGAA 57.376 30.769 3.52 0.00 38.78 2.52
2480 5042 7.335924 CCTTTGGTTTGGACGAATTCTATAAGA 59.664 37.037 3.52 0.00 0.00 2.10
2481 5043 7.335924 TCCTTTGGTTTGGACGAATTCTATAAG 59.664 37.037 3.52 0.00 0.00 1.73
2487 5049 3.057526 CCTCCTTTGGTTTGGACGAATTC 60.058 47.826 0.00 0.00 0.00 2.17
2488 5050 2.890945 CCTCCTTTGGTTTGGACGAATT 59.109 45.455 0.00 0.00 0.00 2.17
2489 5051 2.514803 CCTCCTTTGGTTTGGACGAAT 58.485 47.619 0.00 0.00 0.00 3.34
2490 5052 1.975660 CCTCCTTTGGTTTGGACGAA 58.024 50.000 0.00 0.00 0.00 3.85
2492 5054 1.524008 GGCCTCCTTTGGTTTGGACG 61.524 60.000 0.00 0.00 0.00 4.79
2493 5055 0.178961 AGGCCTCCTTTGGTTTGGAC 60.179 55.000 0.00 0.00 0.00 4.02
2494 5056 1.451449 TAGGCCTCCTTTGGTTTGGA 58.549 50.000 9.68 0.00 34.61 3.53
2495 5057 2.171003 CTTAGGCCTCCTTTGGTTTGG 58.829 52.381 9.68 0.00 34.61 3.28
2496 5058 3.154827 TCTTAGGCCTCCTTTGGTTTG 57.845 47.619 9.68 0.00 34.61 2.93
2500 5062 3.652057 TTCATCTTAGGCCTCCTTTGG 57.348 47.619 9.68 0.00 34.61 3.28
2501 5063 4.637977 GTCTTTCATCTTAGGCCTCCTTTG 59.362 45.833 9.68 3.65 34.61 2.77
2503 5065 3.846588 TGTCTTTCATCTTAGGCCTCCTT 59.153 43.478 9.68 0.00 34.61 3.36
2504 5066 3.454858 TGTCTTTCATCTTAGGCCTCCT 58.545 45.455 9.68 0.00 37.71 3.69
2505 5067 3.914426 TGTCTTTCATCTTAGGCCTCC 57.086 47.619 9.68 0.00 0.00 4.30
2506 5068 5.882557 TCATTTGTCTTTCATCTTAGGCCTC 59.117 40.000 9.68 0.00 0.00 4.70
2507 5069 5.819991 TCATTTGTCTTTCATCTTAGGCCT 58.180 37.500 11.78 11.78 0.00 5.19
2508 5070 6.705863 ATCATTTGTCTTTCATCTTAGGCC 57.294 37.500 0.00 0.00 0.00 5.19
2509 5071 8.465201 AGAAATCATTTGTCTTTCATCTTAGGC 58.535 33.333 0.00 0.00 32.55 3.93
2565 5560 0.899717 TCTGCTTCCCCAACCAATGC 60.900 55.000 0.00 0.00 0.00 3.56
2566 5561 1.547372 CTTCTGCTTCCCCAACCAATG 59.453 52.381 0.00 0.00 0.00 2.82
2600 5595 5.888161 AGGCCTAAATCCTTTGTATTCTGTG 59.112 40.000 1.29 0.00 0.00 3.66
2640 5635 3.480133 CTAGAACCCAGGCCCCGG 61.480 72.222 0.00 0.32 0.00 5.73
2653 5652 0.032515 TTCCCAGTGGCGGATCTAGA 60.033 55.000 2.61 0.00 0.00 2.43
2674 5673 2.047274 CGTCAACCGATGTGGCCT 60.047 61.111 3.32 0.00 43.94 5.19
2675 5674 2.047655 TCGTCAACCGATGTGGCC 60.048 61.111 0.00 0.00 41.60 5.36
2686 5688 4.994217 TGAAGAACATTGTAGCATCGTCAA 59.006 37.500 3.39 0.00 0.00 3.18
2716 5718 2.571653 CCAACTAGGATCTCCACCACAA 59.428 50.000 0.00 0.00 41.22 3.33
2717 5719 2.187958 CCAACTAGGATCTCCACCACA 58.812 52.381 0.00 0.00 41.22 4.17
2759 5764 1.402968 TCATCGGAGTAGGTACGCAAC 59.597 52.381 0.00 0.00 0.00 4.17
2889 6215 4.156190 TGTGCGAAGGTTCTTAAACAACAA 59.844 37.500 0.00 0.00 37.10 2.83
2903 6229 0.817634 TTCCCAAGTGTGTGCGAAGG 60.818 55.000 0.00 0.00 0.00 3.46
2978 6310 9.701355 GTATACCAAATTGCAAACATAAAATGC 57.299 29.630 1.71 0.00 40.45 3.56
3112 7114 7.359097 CGCATCTTCTCTCTTAGTAATGATTGC 60.359 40.741 0.00 0.00 0.00 3.56
3114 7116 7.721402 ACGCATCTTCTCTCTTAGTAATGATT 58.279 34.615 0.00 0.00 0.00 2.57
3122 7131 8.346300 TGTCTATTAACGCATCTTCTCTCTTAG 58.654 37.037 0.00 0.00 0.00 2.18
3124 7133 6.975772 GTGTCTATTAACGCATCTTCTCTCTT 59.024 38.462 0.00 0.00 0.00 2.85
3141 7150 9.685276 TGATTTGGACTTTCATATGTGTCTATT 57.315 29.630 18.16 9.03 0.00 1.73
3148 7157 6.878923 TCTCGTTGATTTGGACTTTCATATGT 59.121 34.615 1.90 0.00 0.00 2.29
3151 7160 6.183360 GCATCTCGTTGATTTGGACTTTCATA 60.183 38.462 0.00 0.00 32.05 2.15
3187 7201 3.813443 TCTTTGAGCTTGCTTCTCAACT 58.187 40.909 12.91 0.00 46.56 3.16
3190 7204 3.144506 CCTTCTTTGAGCTTGCTTCTCA 58.855 45.455 0.00 0.20 38.67 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.