Multiple sequence alignment - TraesCS2A01G457600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G457600 chr2A 100.000 7111 0 0 1 7111 705829215 705822105 0.000000e+00 13132.0
1 TraesCS2A01G457600 chr2A 88.850 565 45 13 4283 4835 180200446 180199888 0.000000e+00 678.0
2 TraesCS2A01G457600 chr2A 87.434 565 53 12 4283 4835 132613140 132612582 1.010000e-177 634.0
3 TraesCS2A01G457600 chr2B 94.235 3920 159 40 2379 6270 677347409 677343529 0.000000e+00 5925.0
4 TraesCS2A01G457600 chr2B 95.881 704 27 2 1677 2379 677348155 677347453 0.000000e+00 1138.0
5 TraesCS2A01G457600 chr2B 93.786 515 22 5 783 1293 677349090 677348582 0.000000e+00 765.0
6 TraesCS2A01G457600 chr2B 86.996 446 26 12 82 497 677349878 677349435 2.320000e-129 473.0
7 TraesCS2A01G457600 chr2B 92.105 304 11 7 6798 7097 677341573 677341279 3.970000e-112 416.0
8 TraesCS2A01G457600 chr2B 87.138 311 24 6 1409 1710 677348581 677348278 8.840000e-89 339.0
9 TraesCS2A01G457600 chr2B 86.364 176 21 2 488 661 677349412 677349238 9.420000e-44 189.0
10 TraesCS2A01G457600 chr2B 81.481 135 8 2 6363 6480 770023009 770023143 2.110000e-15 95.3
11 TraesCS2A01G457600 chr2D 97.336 2290 47 11 2379 4661 565311694 565309412 0.000000e+00 3879.0
12 TraesCS2A01G457600 chr2D 94.623 1432 64 7 4838 6267 565308922 565307502 0.000000e+00 2206.0
13 TraesCS2A01G457600 chr2D 91.593 904 53 11 783 1681 565313637 565312752 0.000000e+00 1227.0
14 TraesCS2A01G457600 chr2D 97.724 703 16 0 1677 2379 565312440 565311738 0.000000e+00 1210.0
15 TraesCS2A01G457600 chr2D 88.948 561 47 10 4283 4833 390624376 390624931 0.000000e+00 678.0
16 TraesCS2A01G457600 chr2D 84.385 602 59 19 83 661 565314381 565313792 6.230000e-155 558.0
17 TraesCS2A01G457600 chr2D 86.875 320 21 11 6804 7111 565273596 565273286 8.840000e-89 339.0
18 TraesCS2A01G457600 chr2D 83.810 105 13 1 6500 6604 565306840 565306740 5.870000e-16 97.1
19 TraesCS2A01G457600 chr2D 100.000 28 0 0 1683 1710 565312589 565312562 1.300000e-02 52.8
20 TraesCS2A01G457600 chr4A 89.698 563 42 11 4283 4835 677889101 677888545 0.000000e+00 704.0
21 TraesCS2A01G457600 chr4A 88.319 565 48 12 4283 4835 29802689 29802131 0.000000e+00 662.0
22 TraesCS2A01G457600 chr6A 88.434 562 47 12 4283 4832 68549202 68549757 0.000000e+00 662.0
23 TraesCS2A01G457600 chr6A 80.142 141 11 5 6357 6480 147983502 147983642 9.830000e-14 89.8
24 TraesCS2A01G457600 chr6A 79.167 144 11 9 6354 6478 103953310 103953453 1.640000e-11 82.4
25 TraesCS2A01G457600 chr7A 87.080 565 54 14 4283 4833 104997909 104997350 7.830000e-174 621.0
26 TraesCS2A01G457600 chr7A 80.851 141 12 5 6355 6480 123275839 123275699 5.870000e-16 97.1
27 TraesCS2A01G457600 chr7D 86.029 136 9 3 6356 6482 636919891 636919757 3.460000e-28 137.0
28 TraesCS2A01G457600 chr5A 85.714 133 8 4 6358 6480 501412238 501412369 5.790000e-26 130.0
29 TraesCS2A01G457600 chr5A 79.861 144 11 6 6355 6480 347452253 347452110 9.830000e-14 89.8
30 TraesCS2A01G457600 chr3D 91.579 95 6 1 6358 6450 217406444 217406538 5.790000e-26 130.0
31 TraesCS2A01G457600 chr4D 90.426 94 8 1 6355 6447 504323893 504323986 9.690000e-24 122.0
32 TraesCS2A01G457600 chr4D 78.873 142 13 7 6356 6480 487380662 487380521 5.910000e-11 80.5
33 TraesCS2A01G457600 chr1B 91.209 91 7 1 6355 6444 75082185 75082095 9.690000e-24 122.0
34 TraesCS2A01G457600 chr1A 83.942 137 12 3 6355 6482 400406951 400406816 9.690000e-24 122.0
35 TraesCS2A01G457600 chr5D 88.776 98 10 1 6354 6450 13721771 13721674 1.250000e-22 119.0
36 TraesCS2A01G457600 chr5B 83.453 139 12 3 6354 6482 45553083 45552946 1.250000e-22 119.0
37 TraesCS2A01G457600 chr4B 83.607 122 14 3 6360 6478 654690080 654689962 7.540000e-20 110.0
38 TraesCS2A01G457600 chr4B 84.507 71 10 1 6355 6424 23382668 23382738 1.280000e-07 69.4
39 TraesCS2A01G457600 chr7B 81.379 145 8 8 6355 6480 710960853 710960709 4.540000e-17 100.0
40 TraesCS2A01G457600 chr3B 76.596 141 15 4 6356 6478 260854344 260854204 2.140000e-05 62.1
41 TraesCS2A01G457600 chr3A 100.000 31 0 0 6450 6480 641882347 641882317 2.770000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G457600 chr2A 705822105 705829215 7110 True 13132.000000 13132 100.000000 1 7111 1 chr2A.!!$R3 7110
1 TraesCS2A01G457600 chr2A 180199888 180200446 558 True 678.000000 678 88.850000 4283 4835 1 chr2A.!!$R2 552
2 TraesCS2A01G457600 chr2A 132612582 132613140 558 True 634.000000 634 87.434000 4283 4835 1 chr2A.!!$R1 552
3 TraesCS2A01G457600 chr2B 677341279 677349878 8599 True 1320.714286 5925 90.929286 82 7097 7 chr2B.!!$R1 7015
4 TraesCS2A01G457600 chr2D 565306740 565314381 7641 True 1318.557143 3879 92.781571 83 6604 7 chr2D.!!$R2 6521
5 TraesCS2A01G457600 chr2D 390624376 390624931 555 False 678.000000 678 88.948000 4283 4833 1 chr2D.!!$F1 550
6 TraesCS2A01G457600 chr4A 677888545 677889101 556 True 704.000000 704 89.698000 4283 4835 1 chr4A.!!$R2 552
7 TraesCS2A01G457600 chr4A 29802131 29802689 558 True 662.000000 662 88.319000 4283 4835 1 chr4A.!!$R1 552
8 TraesCS2A01G457600 chr6A 68549202 68549757 555 False 662.000000 662 88.434000 4283 4832 1 chr6A.!!$F1 549
9 TraesCS2A01G457600 chr7A 104997350 104997909 559 True 621.000000 621 87.080000 4283 4833 1 chr7A.!!$R1 550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
68 69 0.036448 CTATCCCAGCATGAGCCAGG 59.964 60.0 0.0 0.0 43.56 4.45 F
1298 1416 0.249911 GATCGAATTCCGGTCCAGGG 60.250 60.0 0.0 0.0 42.37 4.45 F
2609 3099 0.176680 ATGGCGAAGTAGTGGAGCAG 59.823 55.0 0.0 0.0 0.00 4.24 F
2911 3401 0.325933 ATCTGCTGCACTTGTGGCTA 59.674 50.0 0.0 0.0 0.00 3.93 F
3148 3638 0.682209 CCTCCAATGAAGGCCCACAG 60.682 60.0 0.0 0.0 0.00 3.66 F
4807 5384 0.036732 TCAATGAGGTGGTGACTGGC 59.963 55.0 0.0 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1397 1515 0.741221 GCATGACCACCCTCGAAGTC 60.741 60.000 0.0 0.0 0.00 3.01 R
2813 3303 1.200716 CAAGATGGTTCGCAACATGCT 59.799 47.619 0.0 0.0 42.25 3.79 R
3677 4167 0.240945 GCATGAACCCAGACGTTTGG 59.759 55.000 18.0 18.0 38.00 3.28 R
3753 4243 2.057137 TTGCTGCTTTTCTCCACTGT 57.943 45.000 0.0 0.0 0.00 3.55 R
4879 5696 2.906389 TCAATCTCCACCAGCAACTAGT 59.094 45.455 0.0 0.0 0.00 2.57 R
6404 8987 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.0 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.743575 ACACTAAACTTATGGACATTGCTC 57.256 37.500 0.00 0.00 0.00 4.26
26 27 6.476378 ACACTAAACTTATGGACATTGCTCT 58.524 36.000 0.00 0.00 0.00 4.09
27 28 6.595716 ACACTAAACTTATGGACATTGCTCTC 59.404 38.462 0.00 0.00 0.00 3.20
28 29 6.595326 CACTAAACTTATGGACATTGCTCTCA 59.405 38.462 0.00 0.00 0.00 3.27
29 30 7.281774 CACTAAACTTATGGACATTGCTCTCAT 59.718 37.037 0.00 0.00 0.00 2.90
30 31 6.446781 AAACTTATGGACATTGCTCTCATG 57.553 37.500 0.00 0.00 0.00 3.07
31 32 5.108187 ACTTATGGACATTGCTCTCATGT 57.892 39.130 0.00 0.00 0.00 3.21
32 33 5.503927 ACTTATGGACATTGCTCTCATGTT 58.496 37.500 0.00 0.00 0.00 2.71
33 34 5.356190 ACTTATGGACATTGCTCTCATGTTG 59.644 40.000 0.00 0.00 0.00 3.33
34 35 3.421919 TGGACATTGCTCTCATGTTGA 57.578 42.857 0.00 0.00 0.00 3.18
35 36 3.753815 TGGACATTGCTCTCATGTTGAA 58.246 40.909 0.00 0.00 0.00 2.69
36 37 4.143543 TGGACATTGCTCTCATGTTGAAA 58.856 39.130 0.00 0.00 0.00 2.69
37 38 4.768448 TGGACATTGCTCTCATGTTGAAAT 59.232 37.500 0.00 0.00 0.00 2.17
38 39 5.100259 GGACATTGCTCTCATGTTGAAATG 58.900 41.667 11.62 11.62 0.00 2.32
39 40 5.106038 GGACATTGCTCTCATGTTGAAATGA 60.106 40.000 16.83 0.00 35.31 2.57
40 41 6.335471 ACATTGCTCTCATGTTGAAATGAA 57.665 33.333 16.83 1.25 36.16 2.57
41 42 6.931838 ACATTGCTCTCATGTTGAAATGAAT 58.068 32.000 16.83 1.03 36.16 2.57
42 43 7.383687 ACATTGCTCTCATGTTGAAATGAATT 58.616 30.769 16.83 0.00 36.16 2.17
43 44 8.525316 ACATTGCTCTCATGTTGAAATGAATTA 58.475 29.630 16.83 0.00 36.16 1.40
44 45 9.529325 CATTGCTCTCATGTTGAAATGAATTAT 57.471 29.630 9.07 0.00 36.16 1.28
47 48 9.176460 TGCTCTCATGTTGAAATGAATTATACA 57.824 29.630 0.00 0.00 36.16 2.29
48 49 9.661187 GCTCTCATGTTGAAATGAATTATACAG 57.339 33.333 0.00 0.00 36.16 2.74
49 50 9.661187 CTCTCATGTTGAAATGAATTATACAGC 57.339 33.333 0.00 0.00 36.16 4.40
50 51 9.399797 TCTCATGTTGAAATGAATTATACAGCT 57.600 29.630 0.00 0.00 36.16 4.24
55 56 9.066892 TGTTGAAATGAATTATACAGCTATCCC 57.933 33.333 0.00 0.00 0.00 3.85
56 57 9.066892 GTTGAAATGAATTATACAGCTATCCCA 57.933 33.333 0.00 0.00 0.00 4.37
57 58 8.853077 TGAAATGAATTATACAGCTATCCCAG 57.147 34.615 0.00 0.00 0.00 4.45
67 68 3.627645 CTATCCCAGCATGAGCCAG 57.372 57.895 0.00 0.00 43.56 4.85
68 69 0.036448 CTATCCCAGCATGAGCCAGG 59.964 60.000 0.00 0.00 43.56 4.45
80 81 4.684134 GCCAGGGCTTTGGGCTGA 62.684 66.667 2.30 0.00 44.32 4.26
123 124 9.224267 TCTTGAAAGAGACATTATTTCCAAGAG 57.776 33.333 0.00 0.00 32.10 2.85
207 215 5.378230 TGAGATTCCATTTACCAGATGCT 57.622 39.130 0.00 0.00 0.00 3.79
291 301 4.509970 TGATATTTGGGAATCAGTAACGCG 59.490 41.667 3.53 3.53 0.00 6.01
292 302 1.444836 TTTGGGAATCAGTAACGCGG 58.555 50.000 12.47 0.00 0.00 6.46
310 320 9.731519 GTAACGCGGTATTTACATCAAATATAC 57.268 33.333 7.35 0.00 40.39 1.47
315 325 8.941977 GCGGTATTTACATCAAATATACCATGA 58.058 33.333 0.00 0.00 40.39 3.07
392 402 0.813184 ATGTGGCTGAAAAGCATCCG 59.187 50.000 0.00 0.00 35.50 4.18
393 403 1.243342 TGTGGCTGAAAAGCATCCGG 61.243 55.000 0.00 0.00 35.50 5.14
404 434 1.148273 GCATCCGGGCATAGGTCAA 59.852 57.895 0.00 0.00 0.00 3.18
455 485 7.442969 TGTCAACTTACGTTTATCTCCACATTT 59.557 33.333 0.00 0.00 0.00 2.32
486 516 9.968743 GGTATTAAGCGTTAAATATACATGAGC 57.031 33.333 0.00 0.00 0.00 4.26
523 586 6.801539 TTTCTTTGAGACGATTAATGCAGT 57.198 33.333 0.00 0.00 0.00 4.40
527 590 5.530519 TTGAGACGATTAATGCAGTCAAC 57.469 39.130 14.10 9.74 36.18 3.18
528 591 4.565022 TGAGACGATTAATGCAGTCAACA 58.435 39.130 14.10 11.37 36.18 3.33
529 592 4.388773 TGAGACGATTAATGCAGTCAACAC 59.611 41.667 14.10 6.53 36.18 3.32
530 593 4.314961 AGACGATTAATGCAGTCAACACA 58.685 39.130 14.10 0.00 36.18 3.72
531 594 4.937620 AGACGATTAATGCAGTCAACACAT 59.062 37.500 14.10 0.00 36.18 3.21
532 595 6.106003 AGACGATTAATGCAGTCAACACATA 58.894 36.000 14.10 0.00 36.18 2.29
550 614 7.661536 ACACATAGTTACTCATATGACCACT 57.338 36.000 0.00 6.62 34.24 4.00
558 622 5.670792 ACTCATATGACCACTTTACGGAA 57.329 39.130 0.00 0.00 0.00 4.30
564 628 3.921677 TGACCACTTTACGGAAGTCATC 58.078 45.455 3.76 5.60 45.40 2.92
578 642 3.851458 AGTCATCATCATTGGCTGCTA 57.149 42.857 0.00 0.00 0.00 3.49
582 646 3.644738 TCATCATCATTGGCTGCTAGAGA 59.355 43.478 0.00 0.00 0.00 3.10
587 651 7.486407 TCATCATTGGCTGCTAGAGAATATA 57.514 36.000 0.00 0.00 0.00 0.86
589 653 5.728471 TCATTGGCTGCTAGAGAATATAGC 58.272 41.667 0.00 0.00 44.81 2.97
730 831 9.609346 TTTTTCTCTAAAATAATACTCCCTCCG 57.391 33.333 0.00 0.00 34.62 4.63
731 832 8.543293 TTTCTCTAAAATAATACTCCCTCCGA 57.457 34.615 0.00 0.00 0.00 4.55
732 833 7.521871 TCTCTAAAATAATACTCCCTCCGAC 57.478 40.000 0.00 0.00 0.00 4.79
733 834 6.206243 TCTCTAAAATAATACTCCCTCCGACG 59.794 42.308 0.00 0.00 0.00 5.12
734 835 4.332428 AAAATAATACTCCCTCCGACGG 57.668 45.455 7.84 7.84 0.00 4.79
735 836 2.965671 ATAATACTCCCTCCGACGGA 57.034 50.000 17.28 17.28 0.00 4.69
743 844 4.903026 CTCCGACGGAGGGAGTAT 57.097 61.111 32.26 0.00 45.43 2.12
747 848 1.064166 TCCGACGGAGGGAGTATTCTT 60.064 52.381 13.88 0.00 0.00 2.52
748 849 1.755380 CCGACGGAGGGAGTATTCTTT 59.245 52.381 8.64 0.00 0.00 2.52
749 850 2.481449 CCGACGGAGGGAGTATTCTTTG 60.481 54.545 8.64 0.00 0.00 2.77
750 851 2.165845 CGACGGAGGGAGTATTCTTTGT 59.834 50.000 0.00 0.00 0.00 2.83
751 852 3.368116 CGACGGAGGGAGTATTCTTTGTT 60.368 47.826 0.00 0.00 0.00 2.83
753 854 3.055312 ACGGAGGGAGTATTCTTTGTTCC 60.055 47.826 0.00 0.00 0.00 3.62
755 856 4.404715 CGGAGGGAGTATTCTTTGTTCCTA 59.595 45.833 0.00 0.00 0.00 2.94
756 857 5.105064 CGGAGGGAGTATTCTTTGTTCCTAA 60.105 44.000 0.00 0.00 0.00 2.69
757 858 6.575649 CGGAGGGAGTATTCTTTGTTCCTAAA 60.576 42.308 0.00 0.00 0.00 1.85
758 859 7.347252 GGAGGGAGTATTCTTTGTTCCTAAAT 58.653 38.462 0.00 0.00 0.00 1.40
759 860 8.491958 GGAGGGAGTATTCTTTGTTCCTAAATA 58.508 37.037 0.00 0.00 0.00 1.40
760 861 9.549078 GAGGGAGTATTCTTTGTTCCTAAATAG 57.451 37.037 0.00 0.00 0.00 1.73
761 862 9.059023 AGGGAGTATTCTTTGTTCCTAAATAGT 57.941 33.333 0.00 0.00 0.00 2.12
801 914 4.937620 GCAGTGATTTGGTTGAGTGAGATA 59.062 41.667 0.00 0.00 0.00 1.98
887 1004 5.880887 GTCTTGGAATTTCTCCTCCGTTATT 59.119 40.000 0.00 0.00 45.64 1.40
892 1009 5.006455 GGAATTTCTCCTCCGTTATTTCGTC 59.994 44.000 0.00 0.00 41.61 4.20
930 1048 3.808656 GTCTCGTCCCGTCCCGTC 61.809 72.222 0.00 0.00 0.00 4.79
931 1049 4.025858 TCTCGTCCCGTCCCGTCT 62.026 66.667 0.00 0.00 0.00 4.18
932 1050 3.060615 CTCGTCCCGTCCCGTCTT 61.061 66.667 0.00 0.00 0.00 3.01
934 1052 4.125695 CGTCCCGTCCCGTCTTCC 62.126 72.222 0.00 0.00 0.00 3.46
936 1054 2.362120 TCCCGTCCCGTCTTCCTC 60.362 66.667 0.00 0.00 0.00 3.71
937 1055 3.459063 CCCGTCCCGTCTTCCTCC 61.459 72.222 0.00 0.00 0.00 4.30
938 1056 3.459063 CCGTCCCGTCTTCCTCCC 61.459 72.222 0.00 0.00 0.00 4.30
939 1057 3.823330 CGTCCCGTCTTCCTCCCG 61.823 72.222 0.00 0.00 0.00 5.14
940 1058 2.679287 GTCCCGTCTTCCTCCCGT 60.679 66.667 0.00 0.00 0.00 5.28
941 1059 2.362120 TCCCGTCTTCCTCCCGTC 60.362 66.667 0.00 0.00 0.00 4.79
976 1094 0.762418 CTCTCTCCGCTCCCTCTCTA 59.238 60.000 0.00 0.00 0.00 2.43
1269 1387 2.625823 GGTACGTGGTCCCGTTCGA 61.626 63.158 10.14 0.00 42.00 3.71
1270 1388 1.154150 GTACGTGGTCCCGTTCGAG 60.154 63.158 10.14 0.00 42.00 4.04
1297 1415 3.290776 GATCGAATTCCGGTCCAGG 57.709 57.895 0.00 0.00 42.37 4.45
1298 1416 0.249911 GATCGAATTCCGGTCCAGGG 60.250 60.000 0.00 0.00 42.37 4.45
1299 1417 1.696097 ATCGAATTCCGGTCCAGGGG 61.696 60.000 0.00 0.00 39.14 4.79
1300 1418 2.666098 CGAATTCCGGTCCAGGGGT 61.666 63.158 0.00 0.00 33.91 4.95
1307 1425 3.647771 GGTCCAGGGGTGGGTGTC 61.648 72.222 0.00 0.00 0.00 3.67
1325 1443 3.804329 GGTTGGATGGCCGGGCTA 61.804 66.667 29.87 14.40 36.79 3.93
1341 1459 1.473434 GGCTAGGGGTTCGATCACTTG 60.473 57.143 0.00 0.00 0.00 3.16
1372 1490 2.653726 TGTGAAACATCTGGTGCTTGT 58.346 42.857 0.00 0.00 45.67 3.16
1377 1495 3.340814 AACATCTGGTGCTTGTAGGAG 57.659 47.619 0.00 0.00 0.00 3.69
1397 1515 1.993370 GGAGTGAATTTGGTCTCGTCG 59.007 52.381 0.00 0.00 0.00 5.12
1398 1516 2.352421 GGAGTGAATTTGGTCTCGTCGA 60.352 50.000 0.00 0.00 0.00 4.20
1399 1517 2.662156 GAGTGAATTTGGTCTCGTCGAC 59.338 50.000 5.18 5.18 42.07 4.20
1400 1518 2.296471 AGTGAATTTGGTCTCGTCGACT 59.704 45.455 14.70 0.00 42.44 4.18
1402 1520 3.121445 GTGAATTTGGTCTCGTCGACTTC 59.879 47.826 14.70 7.64 42.44 3.01
1403 1521 1.978542 ATTTGGTCTCGTCGACTTCG 58.021 50.000 14.70 0.00 42.44 3.79
1423 1542 1.679977 GGGTGGTCATGCTGCATGT 60.680 57.895 34.14 6.21 41.98 3.21
1487 1614 2.252072 TAGATGAACTGGGTGGCGCC 62.252 60.000 22.73 22.73 0.00 6.53
1499 1626 2.042259 TGGCGCCTGCTGATTTCTG 61.042 57.895 29.70 0.00 42.25 3.02
1520 1647 3.753797 TGTAGTCTGACTGAGCTGTAGTG 59.246 47.826 20.19 0.00 0.00 2.74
1522 1649 2.817258 AGTCTGACTGAGCTGTAGTGAC 59.183 50.000 10.00 7.31 0.00 3.67
1524 1651 3.004839 GTCTGACTGAGCTGTAGTGACAA 59.995 47.826 5.02 0.00 34.35 3.18
1529 1656 5.944007 TGACTGAGCTGTAGTGACAAGTATA 59.056 40.000 5.02 0.00 34.35 1.47
1537 1664 7.036220 GCTGTAGTGACAAGTATACACTCAAT 58.964 38.462 5.50 4.45 42.65 2.57
1561 1688 6.845758 ATGTGTAGTACTACTTTGGTGCTA 57.154 37.500 28.56 7.13 37.00 3.49
1565 1692 4.189639 AGTACTACTTTGGTGCTACAGC 57.810 45.455 0.00 0.00 42.50 4.40
1593 1720 6.269769 TGATCTCTGTGGGCACATATATGTTA 59.730 38.462 15.85 0.73 41.01 2.41
1594 1721 5.853936 TCTCTGTGGGCACATATATGTTAC 58.146 41.667 15.85 10.80 41.01 2.50
1595 1722 5.602561 TCTCTGTGGGCACATATATGTTACT 59.397 40.000 15.85 0.00 41.01 2.24
1596 1723 5.610398 TCTGTGGGCACATATATGTTACTG 58.390 41.667 15.85 14.56 41.01 2.74
1597 1724 5.130311 TCTGTGGGCACATATATGTTACTGT 59.870 40.000 15.85 0.00 41.01 3.55
1651 1780 6.899393 TTTTCAGCACTCAAATTGGTAGAT 57.101 33.333 0.00 0.00 0.00 1.98
1656 1785 6.070251 TCAGCACTCAAATTGGTAGATAGGAA 60.070 38.462 0.00 0.00 0.00 3.36
1711 2157 4.260948 GCTATTAATCTGCAGGTGCTTGTC 60.261 45.833 15.13 0.00 42.66 3.18
1723 2169 2.415512 GGTGCTTGTCAAGAATACCGAC 59.584 50.000 16.99 0.00 0.00 4.79
1726 2172 3.496884 TGCTTGTCAAGAATACCGACAAC 59.503 43.478 16.99 0.00 42.95 3.32
1747 2193 4.222336 ACAATGTTGGGAGGATTGTCAAA 58.778 39.130 0.00 0.00 35.84 2.69
1802 2248 2.964464 TCCAAGAGAGAGCATCCTGATC 59.036 50.000 0.00 0.00 33.66 2.92
1828 2274 0.322008 CTGTGGCCTCAACCTCTTCC 60.322 60.000 9.14 0.00 0.00 3.46
1861 2307 4.341520 GTGATGGGATTCTTACCTACTCGT 59.658 45.833 0.00 0.00 0.00 4.18
1952 2398 1.308069 CCTGGGAGTGCATGTTTCCG 61.308 60.000 0.00 0.00 31.59 4.30
2027 2473 3.260884 AGTTTTCGAGGATGGTTCTGCTA 59.739 43.478 0.00 0.00 0.00 3.49
2275 2721 7.273381 GTGTTTTGCATACATAATGACTGGAAC 59.727 37.037 5.58 0.00 37.86 3.62
2399 2889 6.070538 TCAGATCCTCTTAGCTTAGTTTTGCT 60.071 38.462 0.00 0.00 42.67 3.91
2600 3090 0.326595 TCCCTTTGCATGGCGAAGTA 59.673 50.000 15.09 2.86 45.63 2.24
2609 3099 0.176680 ATGGCGAAGTAGTGGAGCAG 59.823 55.000 0.00 0.00 0.00 4.24
2657 3147 7.009174 GCATTATGTCCTTCAAACATTTTACCG 59.991 37.037 0.00 0.00 38.31 4.02
2738 3228 9.827411 GTAGTCTCATTCCTTTTCACATTTTAC 57.173 33.333 0.00 0.00 0.00 2.01
2813 3303 4.515361 TGTGGAAAAAGAACGGTAGTCAA 58.485 39.130 0.00 0.00 0.00 3.18
2911 3401 0.325933 ATCTGCTGCACTTGTGGCTA 59.674 50.000 0.00 0.00 0.00 3.93
2968 3458 9.621629 TTTGTCCTTTGTTATCTCTACAGAAAA 57.378 29.630 0.00 0.00 30.24 2.29
3000 3490 8.513774 TCCTGTTTTAGTTCGTAAACTGTTTTT 58.486 29.630 11.48 0.00 45.37 1.94
3051 3541 7.597369 GCGATGGTATTTACTTTGTTTCCTTTT 59.403 33.333 0.00 0.00 0.00 2.27
3112 3602 8.421784 TCTATAATACTTCTTCGCCACTTTGAT 58.578 33.333 0.00 0.00 0.00 2.57
3148 3638 0.682209 CCTCCAATGAAGGCCCACAG 60.682 60.000 0.00 0.00 0.00 3.66
3340 3830 9.817809 TCATCTTTGTATCAACTATCAAGTACC 57.182 33.333 0.00 0.00 33.75 3.34
3753 4243 5.150683 GTGTGTCATTTGCGCATAAAGTTA 58.849 37.500 12.75 0.00 0.00 2.24
3927 4417 6.266786 ACCAAAAGTAAAACACTAATCCCTGG 59.733 38.462 0.00 0.00 36.04 4.45
3930 4420 4.844884 AGTAAAACACTAATCCCTGGCTC 58.155 43.478 0.00 0.00 34.98 4.70
3942 4432 2.979678 TCCCTGGCTCCCAATATCTAAC 59.020 50.000 0.00 0.00 30.80 2.34
4181 4671 6.245115 TGCATTCTATCGATGCAAATAAGG 57.755 37.500 8.54 0.00 46.73 2.69
4443 4942 6.116680 CATGCTCACTAGGATGTTTTCTTC 57.883 41.667 0.00 0.00 44.24 2.87
4505 5004 7.934120 ACTGAGTGCTCATTAAACTTTCTTAGT 59.066 33.333 2.06 0.00 39.13 2.24
4600 5103 2.042686 TATCCATCTGCACAAGCCAC 57.957 50.000 0.00 0.00 41.13 5.01
4613 5116 1.472082 CAAGCCACGTAATTGCCATGA 59.528 47.619 0.00 0.00 0.00 3.07
4807 5384 0.036732 TCAATGAGGTGGTGACTGGC 59.963 55.000 0.00 0.00 0.00 4.85
4828 5405 4.505039 GGCTGTCTCAGTTTTCCCTCTTTA 60.505 45.833 0.00 0.00 33.43 1.85
4877 5694 9.997172 ATTCACTTTCCCCTTTTATCTCTTTAT 57.003 29.630 0.00 0.00 0.00 1.40
4878 5695 9.822727 TTCACTTTCCCCTTTTATCTCTTTATT 57.177 29.630 0.00 0.00 0.00 1.40
4936 5753 4.322057 ACAGCCAGGTTATTTCCTCATT 57.678 40.909 0.00 0.00 35.37 2.57
4939 5756 6.435164 ACAGCCAGGTTATTTCCTCATTTAT 58.565 36.000 0.00 0.00 35.37 1.40
5174 5991 6.758416 AGTTCTTTCTTTCACCAAATTTCAGC 59.242 34.615 0.00 0.00 0.00 4.26
5183 6000 4.097135 TCACCAAATTTCAGCTTCGTTTCA 59.903 37.500 0.00 0.00 0.00 2.69
5251 6068 4.295870 CACAGACTCGCAAGTACAAACTA 58.704 43.478 0.00 0.00 35.28 2.24
5311 6128 0.954452 CTCCAAACTTCACTGGTGCC 59.046 55.000 0.00 0.00 34.11 5.01
5388 6205 1.821332 GCTGTACATCCCTGCTGCC 60.821 63.158 0.00 0.00 0.00 4.85
5412 6230 5.052172 CGCACATTATGTTTTTCATAGCTGC 60.052 40.000 0.00 0.00 39.73 5.25
5577 6395 5.022021 GCACAATAAAAATCTCTTCGGTCG 58.978 41.667 0.00 0.00 0.00 4.79
5774 6592 4.878397 ACTAATCAACTATTGCCTGAGTGC 59.122 41.667 0.00 0.00 0.00 4.40
5856 6674 1.089920 CAAGCTCCTTCCGTGAATGG 58.910 55.000 0.00 0.00 0.00 3.16
5930 6748 3.578688 CACCTGCCAGTTAAGAATTTGC 58.421 45.455 0.00 0.00 0.00 3.68
5967 6785 1.339727 ACCGAGCAGGGATGTAAAACC 60.340 52.381 0.00 0.00 46.96 3.27
5982 6800 9.016438 GGATGTAAAACCCTGAAAAATACTGTA 57.984 33.333 0.00 0.00 0.00 2.74
6094 6931 8.145316 TCTACGTAAACTACAATGCAAAAGTT 57.855 30.769 0.00 0.00 33.72 2.66
6238 7075 9.396022 ACAAAATTAGTAGGACATAAGACATGG 57.604 33.333 0.00 0.00 0.00 3.66
6288 8870 6.699575 ATTGTTCTAACATGCCTAATCACC 57.300 37.500 0.00 0.00 38.95 4.02
6298 8880 2.110899 TGCCTAATCACCAGGGGAAAAA 59.889 45.455 0.00 0.00 33.44 1.94
6321 8904 6.819397 AAGGTGTAGGACAAAATAAAGAGC 57.181 37.500 0.00 0.00 0.00 4.09
6323 8906 6.485171 AGGTGTAGGACAAAATAAAGAGCAT 58.515 36.000 0.00 0.00 0.00 3.79
6324 8907 7.630082 AGGTGTAGGACAAAATAAAGAGCATA 58.370 34.615 0.00 0.00 0.00 3.14
6325 8908 8.107095 AGGTGTAGGACAAAATAAAGAGCATAA 58.893 33.333 0.00 0.00 0.00 1.90
6326 8909 8.903820 GGTGTAGGACAAAATAAAGAGCATAAT 58.096 33.333 0.00 0.00 0.00 1.28
6329 8912 9.952188 GTAGGACAAAATAAAGAGCATAATTCC 57.048 33.333 0.00 0.00 0.00 3.01
6330 8913 8.829373 AGGACAAAATAAAGAGCATAATTCCT 57.171 30.769 0.00 0.00 0.00 3.36
6331 8914 9.920946 AGGACAAAATAAAGAGCATAATTCCTA 57.079 29.630 0.00 0.00 0.00 2.94
6381 8964 2.468532 AACACAGTACAAACGCAAGC 57.531 45.000 0.00 0.00 45.62 4.01
6382 8965 0.303493 ACACAGTACAAACGCAAGCG 59.697 50.000 13.50 13.50 46.03 4.68
6383 8966 0.991770 CACAGTACAAACGCAAGCGC 60.992 55.000 15.09 0.00 44.19 5.92
6384 8967 1.157870 ACAGTACAAACGCAAGCGCT 61.158 50.000 15.09 2.64 44.19 5.92
6385 8968 0.451135 CAGTACAAACGCAAGCGCTC 60.451 55.000 12.06 0.00 44.19 5.03
6386 8969 0.878523 AGTACAAACGCAAGCGCTCA 60.879 50.000 12.06 0.00 44.19 4.26
6387 8970 0.165944 GTACAAACGCAAGCGCTCAT 59.834 50.000 12.06 0.00 44.19 2.90
6388 8971 1.392168 GTACAAACGCAAGCGCTCATA 59.608 47.619 12.06 0.00 44.19 2.15
6389 8972 0.165944 ACAAACGCAAGCGCTCATAC 59.834 50.000 12.06 0.00 44.19 2.39
6390 8973 0.165727 CAAACGCAAGCGCTCATACA 59.834 50.000 12.06 0.00 44.19 2.29
6391 8974 1.086696 AAACGCAAGCGCTCATACAT 58.913 45.000 12.06 0.00 44.19 2.29
6392 8975 1.934589 AACGCAAGCGCTCATACATA 58.065 45.000 12.06 0.00 44.19 2.29
6393 8976 1.209128 ACGCAAGCGCTCATACATAC 58.791 50.000 12.06 0.00 44.19 2.39
6394 8977 1.208259 CGCAAGCGCTCATACATACA 58.792 50.000 12.06 0.00 35.30 2.29
6395 8978 1.794701 CGCAAGCGCTCATACATACAT 59.205 47.619 12.06 0.00 35.30 2.29
6396 8979 2.410646 CGCAAGCGCTCATACATACATG 60.411 50.000 12.06 1.45 35.30 3.21
6397 8980 2.663879 GCAAGCGCTCATACATACATGC 60.664 50.000 12.06 9.27 34.30 4.06
6398 8981 2.531522 AGCGCTCATACATACATGCA 57.468 45.000 2.64 0.00 0.00 3.96
6399 8982 3.049708 AGCGCTCATACATACATGCAT 57.950 42.857 2.64 0.00 0.00 3.96
6400 8983 4.192429 AGCGCTCATACATACATGCATA 57.808 40.909 2.64 0.00 0.00 3.14
6401 8984 3.928992 AGCGCTCATACATACATGCATAC 59.071 43.478 2.64 0.00 0.00 2.39
6402 8985 3.679502 GCGCTCATACATACATGCATACA 59.320 43.478 0.00 0.00 0.00 2.29
6403 8986 4.434725 GCGCTCATACATACATGCATACAC 60.435 45.833 0.00 0.00 0.00 2.90
6404 8987 4.925646 CGCTCATACATACATGCATACACT 59.074 41.667 0.00 0.00 0.00 3.55
6405 8988 5.061435 CGCTCATACATACATGCATACACTC 59.939 44.000 0.00 0.00 0.00 3.51
6406 8989 5.928264 GCTCATACATACATGCATACACTCA 59.072 40.000 0.00 0.00 0.00 3.41
6407 8990 6.128715 GCTCATACATACATGCATACACTCAC 60.129 42.308 0.00 0.00 0.00 3.51
6408 8991 6.223120 TCATACATACATGCATACACTCACC 58.777 40.000 0.00 0.00 0.00 4.02
6409 8992 3.808728 ACATACATGCATACACTCACCC 58.191 45.455 0.00 0.00 0.00 4.61
6410 8993 3.141398 CATACATGCATACACTCACCCC 58.859 50.000 0.00 0.00 0.00 4.95
6411 8994 1.289160 ACATGCATACACTCACCCCT 58.711 50.000 0.00 0.00 0.00 4.79
6412 8995 2.477245 ACATGCATACACTCACCCCTA 58.523 47.619 0.00 0.00 0.00 3.53
6413 8996 3.048600 ACATGCATACACTCACCCCTAT 58.951 45.455 0.00 0.00 0.00 2.57
6414 8997 3.181451 ACATGCATACACTCACCCCTATG 60.181 47.826 0.00 0.00 0.00 2.23
6415 8998 2.758130 TGCATACACTCACCCCTATGA 58.242 47.619 0.00 0.00 0.00 2.15
6416 8999 3.111484 TGCATACACTCACCCCTATGAA 58.889 45.455 0.00 0.00 0.00 2.57
6417 9000 3.118408 TGCATACACTCACCCCTATGAAC 60.118 47.826 0.00 0.00 0.00 3.18
6418 9001 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
6419 9002 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
6420 9003 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
6421 9004 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
6422 9005 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
6423 9006 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
6424 9007 1.024579 CACCCCTATGAACGCACACC 61.025 60.000 0.00 0.00 0.00 4.16
6425 9008 1.451387 CCCCTATGAACGCACACCC 60.451 63.158 0.00 0.00 0.00 4.61
6426 9009 1.602237 CCCTATGAACGCACACCCT 59.398 57.895 0.00 0.00 0.00 4.34
6427 9010 0.828022 CCCTATGAACGCACACCCTA 59.172 55.000 0.00 0.00 0.00 3.53
6428 9011 1.202533 CCCTATGAACGCACACCCTAG 60.203 57.143 0.00 0.00 0.00 3.02
6429 9012 1.480954 CCTATGAACGCACACCCTAGT 59.519 52.381 0.00 0.00 0.00 2.57
6430 9013 2.481449 CCTATGAACGCACACCCTAGTC 60.481 54.545 0.00 0.00 0.00 2.59
6431 9014 0.249398 ATGAACGCACACCCTAGTCC 59.751 55.000 0.00 0.00 0.00 3.85
6432 9015 0.830444 TGAACGCACACCCTAGTCCT 60.830 55.000 0.00 0.00 0.00 3.85
6433 9016 1.180029 GAACGCACACCCTAGTCCTA 58.820 55.000 0.00 0.00 0.00 2.94
6434 9017 1.755380 GAACGCACACCCTAGTCCTAT 59.245 52.381 0.00 0.00 0.00 2.57
6435 9018 1.112113 ACGCACACCCTAGTCCTATG 58.888 55.000 0.00 0.00 0.00 2.23
6436 9019 1.341679 ACGCACACCCTAGTCCTATGA 60.342 52.381 0.00 0.00 0.00 2.15
6437 9020 1.338337 CGCACACCCTAGTCCTATGAG 59.662 57.143 0.00 0.00 0.00 2.90
6438 9021 1.069358 GCACACCCTAGTCCTATGAGC 59.931 57.143 0.00 0.00 0.00 4.26
6439 9022 2.388735 CACACCCTAGTCCTATGAGCA 58.611 52.381 0.00 0.00 0.00 4.26
6440 9023 2.101582 CACACCCTAGTCCTATGAGCAC 59.898 54.545 0.00 0.00 0.00 4.40
6441 9024 1.689273 CACCCTAGTCCTATGAGCACC 59.311 57.143 0.00 0.00 0.00 5.01
6442 9025 1.576272 ACCCTAGTCCTATGAGCACCT 59.424 52.381 0.00 0.00 0.00 4.00
6443 9026 2.243810 CCCTAGTCCTATGAGCACCTC 58.756 57.143 0.00 0.00 0.00 3.85
6444 9027 2.243810 CCTAGTCCTATGAGCACCTCC 58.756 57.143 0.00 0.00 0.00 4.30
6445 9028 1.883275 CTAGTCCTATGAGCACCTCCG 59.117 57.143 0.00 0.00 0.00 4.63
6446 9029 0.259065 AGTCCTATGAGCACCTCCGA 59.741 55.000 0.00 0.00 0.00 4.55
6447 9030 0.671251 GTCCTATGAGCACCTCCGAG 59.329 60.000 0.00 0.00 0.00 4.63
6448 9031 0.551396 TCCTATGAGCACCTCCGAGA 59.449 55.000 0.00 0.00 0.00 4.04
6449 9032 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
6470 9053 9.081997 CGAGAGGCATATTATCTTGAGATTTAC 57.918 37.037 0.00 0.00 36.05 2.01
6471 9054 8.994429 AGAGGCATATTATCTTGAGATTTACG 57.006 34.615 0.00 0.00 36.05 3.18
6472 9055 8.807118 AGAGGCATATTATCTTGAGATTTACGA 58.193 33.333 0.00 0.00 36.05 3.43
6473 9056 9.424319 GAGGCATATTATCTTGAGATTTACGAA 57.576 33.333 0.00 0.00 36.05 3.85
6474 9057 9.429359 AGGCATATTATCTTGAGATTTACGAAG 57.571 33.333 0.00 0.00 36.05 3.79
6475 9058 9.209175 GGCATATTATCTTGAGATTTACGAAGT 57.791 33.333 0.00 0.00 39.31 3.01
6480 9063 8.873215 TTATCTTGAGATTTACGAAGTCATCC 57.127 34.615 0.00 0.00 37.74 3.51
6481 9064 6.280855 TCTTGAGATTTACGAAGTCATCCA 57.719 37.500 0.00 0.00 43.93 3.41
6482 9065 6.697395 TCTTGAGATTTACGAAGTCATCCAA 58.303 36.000 0.00 0.00 43.93 3.53
6483 9066 6.590292 TCTTGAGATTTACGAAGTCATCCAAC 59.410 38.462 0.00 0.00 43.93 3.77
6484 9067 5.175859 TGAGATTTACGAAGTCATCCAACC 58.824 41.667 0.00 0.00 43.93 3.77
6485 9068 5.160607 AGATTTACGAAGTCATCCAACCA 57.839 39.130 0.00 0.00 43.93 3.67
6486 9069 5.745227 AGATTTACGAAGTCATCCAACCAT 58.255 37.500 0.00 0.00 43.93 3.55
6487 9070 6.884832 AGATTTACGAAGTCATCCAACCATA 58.115 36.000 0.00 0.00 43.93 2.74
6488 9071 6.986817 AGATTTACGAAGTCATCCAACCATAG 59.013 38.462 0.00 0.00 43.93 2.23
6489 9072 3.543680 ACGAAGTCATCCAACCATAGG 57.456 47.619 0.00 0.00 29.74 2.57
6490 9073 2.838202 ACGAAGTCATCCAACCATAGGT 59.162 45.455 0.00 0.00 29.74 3.08
6491 9074 3.263425 ACGAAGTCATCCAACCATAGGTT 59.737 43.478 0.00 0.00 42.62 3.50
6511 9094 4.377897 GTTGGTTCCCGAATAAGATCGAT 58.622 43.478 0.00 0.00 45.48 3.59
6545 9128 6.632909 TGAAAATGCATAGGGAGTTCAAATG 58.367 36.000 0.00 0.00 0.00 2.32
6548 9131 2.311542 TGCATAGGGAGTTCAAATGGGT 59.688 45.455 0.00 0.00 0.00 4.51
6556 9139 4.145052 GGAGTTCAAATGGGTGAGAGTTT 58.855 43.478 0.00 0.00 0.00 2.66
6557 9140 5.313712 GGAGTTCAAATGGGTGAGAGTTTA 58.686 41.667 0.00 0.00 0.00 2.01
6558 9141 5.946377 GGAGTTCAAATGGGTGAGAGTTTAT 59.054 40.000 0.00 0.00 0.00 1.40
6559 9142 6.127897 GGAGTTCAAATGGGTGAGAGTTTATG 60.128 42.308 0.00 0.00 0.00 1.90
6570 9153 5.869888 GGTGAGAGTTTATGTACCTCAGTTG 59.130 44.000 0.00 0.00 34.92 3.16
6571 9154 6.456501 GTGAGAGTTTATGTACCTCAGTTGT 58.543 40.000 0.00 0.00 34.92 3.32
6572 9155 6.366332 GTGAGAGTTTATGTACCTCAGTTGTG 59.634 42.308 0.00 0.00 34.92 3.33
6577 9494 3.634397 ATGTACCTCAGTTGTGATGGG 57.366 47.619 0.00 0.00 30.18 4.00
6583 9500 2.672996 AGTTGTGATGGGCGTGCC 60.673 61.111 1.16 1.16 0.00 5.01
6596 9513 1.658717 CGTGCCCGAGCTCTTATCG 60.659 63.158 12.85 6.49 40.80 2.92
6620 9537 4.138487 AGTCGAGTTAAAGCTTATGGGG 57.862 45.455 0.00 0.00 0.00 4.96
6623 9540 4.094442 GTCGAGTTAAAGCTTATGGGGTTG 59.906 45.833 0.00 0.00 0.00 3.77
6625 9542 4.881850 CGAGTTAAAGCTTATGGGGTTGAT 59.118 41.667 0.00 0.00 0.00 2.57
6628 9580 7.876068 CGAGTTAAAGCTTATGGGGTTGATATA 59.124 37.037 0.00 0.00 0.00 0.86
6643 9595 6.151144 GGGTTGATATAGGTTCATGGTAATGC 59.849 42.308 0.00 0.00 33.47 3.56
6647 9599 4.640771 ATAGGTTCATGGTAATGCCGAT 57.359 40.909 0.00 0.00 41.21 4.18
6654 9606 1.378531 TGGTAATGCCGATGAGTTGC 58.621 50.000 0.00 0.00 41.21 4.17
6656 9608 1.599542 GGTAATGCCGATGAGTTGCTC 59.400 52.381 0.00 0.00 0.00 4.26
6657 9609 2.555199 GTAATGCCGATGAGTTGCTCT 58.445 47.619 0.00 0.00 0.00 4.09
6662 9614 1.364626 CCGATGAGTTGCTCTGCACC 61.365 60.000 0.00 0.00 38.71 5.01
6668 9620 2.005451 GAGTTGCTCTGCACCATACAG 58.995 52.381 0.00 0.00 38.71 2.74
6669 9621 0.449388 GTTGCTCTGCACCATACAGC 59.551 55.000 0.00 0.00 38.71 4.40
6672 9624 1.372087 GCTCTGCACCATACAGCCAC 61.372 60.000 0.00 0.00 35.04 5.01
6693 9645 1.134491 CCTCCTAACCATCGAACCACC 60.134 57.143 0.00 0.00 0.00 4.61
6695 9647 1.553248 TCCTAACCATCGAACCACCTG 59.447 52.381 0.00 0.00 0.00 4.00
6698 9650 1.604604 AACCATCGAACCACCTGTTG 58.395 50.000 0.00 0.00 37.29 3.33
6717 9669 1.671379 GTTCACCGAGGCAAGGGAC 60.671 63.158 3.39 0.00 0.00 4.46
6719 9671 2.358737 CACCGAGGCAAGGGACAC 60.359 66.667 3.39 0.00 0.00 3.67
6729 9681 2.607038 GGCAAGGGACACGAAAAATGTC 60.607 50.000 0.00 0.00 44.80 3.06
6730 9682 2.293399 GCAAGGGACACGAAAAATGTCT 59.707 45.455 5.22 0.00 44.88 3.41
6731 9683 3.853307 GCAAGGGACACGAAAAATGTCTG 60.853 47.826 5.22 0.00 44.88 3.51
6732 9684 3.208747 AGGGACACGAAAAATGTCTGT 57.791 42.857 5.22 0.00 44.88 3.41
6733 9685 3.551846 AGGGACACGAAAAATGTCTGTT 58.448 40.909 5.22 0.00 44.88 3.16
6734 9686 3.951680 AGGGACACGAAAAATGTCTGTTT 59.048 39.130 5.22 0.00 44.88 2.83
6735 9687 4.401202 AGGGACACGAAAAATGTCTGTTTT 59.599 37.500 5.22 0.00 44.88 2.43
6736 9688 4.738252 GGGACACGAAAAATGTCTGTTTTC 59.262 41.667 5.22 0.00 44.88 2.29
6737 9689 5.336744 GGACACGAAAAATGTCTGTTTTCA 58.663 37.500 9.54 0.00 44.88 2.69
6740 9692 6.386654 ACACGAAAAATGTCTGTTTTCAGTT 58.613 32.000 9.54 0.00 46.98 3.16
6741 9693 7.531716 ACACGAAAAATGTCTGTTTTCAGTTA 58.468 30.769 9.54 0.00 46.98 2.24
6743 9695 6.685403 ACGAAAAATGTCTGTTTTCAGTTACG 59.315 34.615 9.54 0.00 46.98 3.18
6744 9696 6.902948 CGAAAAATGTCTGTTTTCAGTTACGA 59.097 34.615 9.54 0.00 46.98 3.43
6745 9697 7.097570 CGAAAAATGTCTGTTTTCAGTTACGAC 60.098 37.037 9.54 0.00 46.98 4.34
6747 9699 4.031418 TGTCTGTTTTCAGTTACGACGA 57.969 40.909 0.00 0.00 46.98 4.20
6748 9700 4.422840 TGTCTGTTTTCAGTTACGACGAA 58.577 39.130 0.00 0.00 46.98 3.85
6749 9701 4.266029 TGTCTGTTTTCAGTTACGACGAAC 59.734 41.667 0.00 1.85 46.98 3.95
6751 9703 3.361339 CTGTTTTCAGTTACGACGAACGG 60.361 47.826 0.00 3.09 43.32 4.44
6753 9705 7.708749 CTGTTTTCAGTTACGACGAACGGTG 62.709 48.000 0.00 0.00 43.32 4.94
6759 9711 2.354188 CGACGAACGGTGCACTCA 60.354 61.111 17.98 0.00 38.46 3.41
6760 9712 1.733041 CGACGAACGGTGCACTCAT 60.733 57.895 17.98 2.40 38.46 2.90
6761 9713 1.282248 CGACGAACGGTGCACTCATT 61.282 55.000 17.98 8.61 38.46 2.57
6762 9714 0.865769 GACGAACGGTGCACTCATTT 59.134 50.000 17.98 4.68 0.00 2.32
6763 9715 0.865769 ACGAACGGTGCACTCATTTC 59.134 50.000 17.98 12.41 0.00 2.17
6766 9718 2.662791 CGAACGGTGCACTCATTTCTTG 60.663 50.000 17.98 0.00 0.00 3.02
6767 9719 2.254546 ACGGTGCACTCATTTCTTGA 57.745 45.000 17.98 0.00 0.00 3.02
6768 9720 1.873591 ACGGTGCACTCATTTCTTGAC 59.126 47.619 17.98 0.00 0.00 3.18
6769 9721 1.872952 CGGTGCACTCATTTCTTGACA 59.127 47.619 17.98 0.00 0.00 3.58
6770 9722 2.485426 CGGTGCACTCATTTCTTGACAT 59.515 45.455 17.98 0.00 0.00 3.06
6771 9723 3.058016 CGGTGCACTCATTTCTTGACATT 60.058 43.478 17.98 0.00 0.00 2.71
6772 9724 4.232221 GGTGCACTCATTTCTTGACATTG 58.768 43.478 17.98 0.00 0.00 2.82
6773 9725 4.261741 GGTGCACTCATTTCTTGACATTGT 60.262 41.667 17.98 0.00 0.00 2.71
6774 9726 4.913924 GTGCACTCATTTCTTGACATTGTC 59.086 41.667 10.32 9.93 0.00 3.18
6775 9727 4.823442 TGCACTCATTTCTTGACATTGTCT 59.177 37.500 17.26 0.00 33.15 3.41
6776 9728 5.152097 GCACTCATTTCTTGACATTGTCTG 58.848 41.667 17.26 10.37 33.15 3.51
6777 9729 5.278169 GCACTCATTTCTTGACATTGTCTGT 60.278 40.000 17.26 1.32 42.15 3.41
6778 9730 6.732154 CACTCATTTCTTGACATTGTCTGTT 58.268 36.000 17.26 0.00 38.54 3.16
6779 9731 7.198390 CACTCATTTCTTGACATTGTCTGTTT 58.802 34.615 17.26 0.00 38.54 2.83
6780 9732 7.703621 CACTCATTTCTTGACATTGTCTGTTTT 59.296 33.333 17.26 0.00 38.54 2.43
6781 9733 7.917505 ACTCATTTCTTGACATTGTCTGTTTTC 59.082 33.333 17.26 0.00 38.54 2.29
6782 9734 7.770201 TCATTTCTTGACATTGTCTGTTTTCA 58.230 30.769 17.26 0.00 38.54 2.69
6784 9736 5.756195 TCTTGACATTGTCTGTTTTCAGG 57.244 39.130 17.26 0.00 46.94 3.86
6785 9737 5.192927 TCTTGACATTGTCTGTTTTCAGGT 58.807 37.500 17.26 0.00 46.94 4.00
6786 9738 5.652014 TCTTGACATTGTCTGTTTTCAGGTT 59.348 36.000 17.26 0.00 46.94 3.50
6787 9739 5.247507 TGACATTGTCTGTTTTCAGGTTG 57.752 39.130 17.26 0.00 46.94 3.77
6788 9740 4.044426 GACATTGTCTGTTTTCAGGTTGC 58.956 43.478 9.59 0.00 46.94 4.17
6789 9741 3.701040 ACATTGTCTGTTTTCAGGTTGCT 59.299 39.130 0.00 0.00 46.94 3.91
6792 9744 4.893424 TGTCTGTTTTCAGGTTGCTTAC 57.107 40.909 0.00 0.00 46.94 2.34
6793 9745 3.630312 TGTCTGTTTTCAGGTTGCTTACC 59.370 43.478 0.80 0.80 46.94 2.85
6810 9861 6.500041 TGCTTACCGCATTGGATAAAAATAC 58.500 36.000 0.00 0.00 45.47 1.89
6937 9992 1.142185 TCGCGAGTCGTCTACTACCG 61.142 60.000 15.08 6.50 39.07 4.02
6943 9998 0.371645 GTCGTCTACTACCGTCGTGG 59.628 60.000 0.00 0.00 46.41 4.94
6967 10022 1.305887 AACCCCTCCCGTAGTCCAG 60.306 63.158 0.00 0.00 0.00 3.86
6968 10023 2.103079 AACCCCTCCCGTAGTCCAGT 62.103 60.000 0.00 0.00 0.00 4.00
6969 10024 1.757340 CCCCTCCCGTAGTCCAGTC 60.757 68.421 0.00 0.00 0.00 3.51
6970 10025 1.757340 CCCTCCCGTAGTCCAGTCC 60.757 68.421 0.00 0.00 0.00 3.85
6971 10026 1.000019 CCTCCCGTAGTCCAGTCCA 60.000 63.158 0.00 0.00 0.00 4.02
6972 10027 1.321074 CCTCCCGTAGTCCAGTCCAC 61.321 65.000 0.00 0.00 0.00 4.02
6973 10028 1.304713 TCCCGTAGTCCAGTCCACC 60.305 63.158 0.00 0.00 0.00 4.61
6974 10029 1.608336 CCCGTAGTCCAGTCCACCA 60.608 63.158 0.00 0.00 0.00 4.17
6975 10030 1.590147 CCGTAGTCCAGTCCACCAC 59.410 63.158 0.00 0.00 0.00 4.16
6976 10031 1.590147 CGTAGTCCAGTCCACCACC 59.410 63.158 0.00 0.00 0.00 4.61
7023 10078 2.695055 CGTGCCGTGCATCGTAAG 59.305 61.111 1.90 0.00 41.91 2.34
7051 10106 4.899239 GACGCCTCCATCCCGCTG 62.899 72.222 0.00 0.00 0.00 5.18
7074 10129 4.209620 TCCCACCCCCTCCACCAA 62.210 66.667 0.00 0.00 0.00 3.67
7076 10131 3.182263 CCACCCCCTCCACCAACA 61.182 66.667 0.00 0.00 0.00 3.33
7077 10132 2.115266 CACCCCCTCCACCAACAC 59.885 66.667 0.00 0.00 0.00 3.32
7079 10134 3.979497 CCCCCTCCACCAACACCC 61.979 72.222 0.00 0.00 0.00 4.61
7080 10135 2.858974 CCCCTCCACCAACACCCT 60.859 66.667 0.00 0.00 0.00 4.34
7082 10137 2.757077 CCTCCACCAACACCCTCC 59.243 66.667 0.00 0.00 0.00 4.30
7083 10138 2.347490 CTCCACCAACACCCTCCG 59.653 66.667 0.00 0.00 0.00 4.63
7084 10139 3.901797 CTCCACCAACACCCTCCGC 62.902 68.421 0.00 0.00 0.00 5.54
7086 10141 3.953775 CACCAACACCCTCCGCCT 61.954 66.667 0.00 0.00 0.00 5.52
7088 10143 3.322466 CCAACACCCTCCGCCTCT 61.322 66.667 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.100791 AGAGCAATGTCCATAAGTTTAGTGTTA 58.899 33.333 0.00 0.00 0.00 2.41
1 2 6.942576 AGAGCAATGTCCATAAGTTTAGTGTT 59.057 34.615 0.00 0.00 0.00 3.32
2 3 6.476378 AGAGCAATGTCCATAAGTTTAGTGT 58.524 36.000 0.00 0.00 0.00 3.55
3 4 6.595326 TGAGAGCAATGTCCATAAGTTTAGTG 59.405 38.462 0.00 0.00 0.00 2.74
4 5 6.711277 TGAGAGCAATGTCCATAAGTTTAGT 58.289 36.000 0.00 0.00 0.00 2.24
5 6 7.281774 ACATGAGAGCAATGTCCATAAGTTTAG 59.718 37.037 0.00 0.00 0.00 1.85
6 7 7.112122 ACATGAGAGCAATGTCCATAAGTTTA 58.888 34.615 0.00 0.00 0.00 2.01
7 8 5.948162 ACATGAGAGCAATGTCCATAAGTTT 59.052 36.000 0.00 0.00 0.00 2.66
8 9 5.503927 ACATGAGAGCAATGTCCATAAGTT 58.496 37.500 0.00 0.00 0.00 2.66
9 10 5.108187 ACATGAGAGCAATGTCCATAAGT 57.892 39.130 0.00 0.00 0.00 2.24
10 11 5.587443 TCAACATGAGAGCAATGTCCATAAG 59.413 40.000 0.00 0.00 0.00 1.73
11 12 5.499313 TCAACATGAGAGCAATGTCCATAA 58.501 37.500 0.00 0.00 0.00 1.90
12 13 5.101648 TCAACATGAGAGCAATGTCCATA 57.898 39.130 0.00 0.00 0.00 2.74
13 14 3.959293 TCAACATGAGAGCAATGTCCAT 58.041 40.909 0.00 0.00 0.00 3.41
14 15 3.421919 TCAACATGAGAGCAATGTCCA 57.578 42.857 0.00 0.00 0.00 4.02
15 16 4.771590 TTTCAACATGAGAGCAATGTCC 57.228 40.909 0.00 0.00 0.00 4.02
16 17 5.946298 TCATTTCAACATGAGAGCAATGTC 58.054 37.500 0.00 0.00 28.43 3.06
17 18 5.970317 TCATTTCAACATGAGAGCAATGT 57.030 34.783 0.00 0.00 28.43 2.71
18 19 7.827819 AATTCATTTCAACATGAGAGCAATG 57.172 32.000 0.00 5.52 34.59 2.82
21 22 9.176460 TGTATAATTCATTTCAACATGAGAGCA 57.824 29.630 0.00 0.00 34.59 4.26
22 23 9.661187 CTGTATAATTCATTTCAACATGAGAGC 57.339 33.333 0.00 0.00 34.59 4.09
23 24 9.661187 GCTGTATAATTCATTTCAACATGAGAG 57.339 33.333 0.00 0.00 34.59 3.20
24 25 9.399797 AGCTGTATAATTCATTTCAACATGAGA 57.600 29.630 0.00 0.00 34.59 3.27
29 30 9.066892 GGGATAGCTGTATAATTCATTTCAACA 57.933 33.333 0.00 0.00 0.00 3.33
30 31 9.066892 TGGGATAGCTGTATAATTCATTTCAAC 57.933 33.333 0.00 0.00 0.00 3.18
31 32 9.288576 CTGGGATAGCTGTATAATTCATTTCAA 57.711 33.333 0.00 0.00 0.00 2.69
32 33 8.853077 CTGGGATAGCTGTATAATTCATTTCA 57.147 34.615 0.00 0.00 0.00 2.69
49 50 0.036448 CCTGGCTCATGCTGGGATAG 59.964 60.000 0.00 0.00 39.59 2.08
50 51 2.148611 CCTGGCTCATGCTGGGATA 58.851 57.895 0.00 0.00 39.59 2.59
51 52 2.924640 CCTGGCTCATGCTGGGAT 59.075 61.111 0.00 0.00 39.59 3.85
63 64 4.684134 TCAGCCCAAAGCCCTGGC 62.684 66.667 0.00 0.00 45.47 4.85
64 65 2.677875 GTCAGCCCAAAGCCCTGG 60.678 66.667 0.00 0.00 45.47 4.45
65 66 1.304713 ATGTCAGCCCAAAGCCCTG 60.305 57.895 0.00 0.00 45.47 4.45
66 67 1.000396 GATGTCAGCCCAAAGCCCT 60.000 57.895 0.00 0.00 45.47 5.19
67 68 1.000396 AGATGTCAGCCCAAAGCCC 60.000 57.895 0.00 0.00 45.47 5.19
68 69 0.322816 TGAGATGTCAGCCCAAAGCC 60.323 55.000 0.00 0.00 45.47 4.35
69 70 0.807496 GTGAGATGTCAGCCCAAAGC 59.193 55.000 0.00 0.00 44.25 3.51
70 71 2.486472 AGTGAGATGTCAGCCCAAAG 57.514 50.000 0.00 0.00 31.53 2.77
71 72 2.957402 AAGTGAGATGTCAGCCCAAA 57.043 45.000 0.00 0.00 31.53 3.28
72 73 2.957402 AAAGTGAGATGTCAGCCCAA 57.043 45.000 0.00 0.00 31.53 4.12
73 74 2.373169 AGAAAAGTGAGATGTCAGCCCA 59.627 45.455 0.00 0.00 31.53 5.36
74 75 3.064900 AGAAAAGTGAGATGTCAGCCC 57.935 47.619 0.00 0.00 31.53 5.19
75 76 5.240403 AGAAAAGAAAAGTGAGATGTCAGCC 59.760 40.000 0.00 0.00 31.53 4.85
76 77 6.311055 AGAAAAGAAAAGTGAGATGTCAGC 57.689 37.500 0.00 0.00 31.53 4.26
77 78 7.923888 TCAAGAAAAGAAAAGTGAGATGTCAG 58.076 34.615 0.00 0.00 31.53 3.51
78 79 7.864108 TCAAGAAAAGAAAAGTGAGATGTCA 57.136 32.000 0.00 0.00 0.00 3.58
79 80 9.230932 CTTTCAAGAAAAGAAAAGTGAGATGTC 57.769 33.333 0.00 0.00 46.18 3.06
179 180 9.525409 CATCTGGTAAATGGAATCTCATTTTTC 57.475 33.333 12.48 8.23 42.63 2.29
207 215 3.004315 GGCTCCGTGAATGTTTTCAAGAA 59.996 43.478 3.69 0.00 43.29 2.52
256 266 9.300681 GATTCCCAAATATCATGTTTATCTGGA 57.699 33.333 10.51 1.79 0.00 3.86
287 297 6.930164 TGGTATATTTGATGTAAATACCGCGT 59.070 34.615 4.92 0.00 42.39 6.01
358 368 7.878547 TCAGCCACATGTTTTGAATCATATA 57.121 32.000 0.00 0.00 0.00 0.86
359 369 6.778834 TCAGCCACATGTTTTGAATCATAT 57.221 33.333 0.00 0.00 0.00 1.78
392 402 4.520492 CCATCTAATGTTTGACCTATGCCC 59.480 45.833 0.00 0.00 0.00 5.36
393 403 5.133221 ACCATCTAATGTTTGACCTATGCC 58.867 41.667 0.00 0.00 0.00 4.40
460 490 9.968743 GCTCATGTATATTTAACGCTTAATACC 57.031 33.333 0.00 0.00 0.00 2.73
469 499 8.387354 TGTCACTTTGCTCATGTATATTTAACG 58.613 33.333 0.00 0.00 0.00 3.18
478 508 6.822667 AATTGATGTCACTTTGCTCATGTA 57.177 33.333 0.00 0.00 0.00 2.29
486 516 7.112565 CGTCTCAAAGAAATTGATGTCACTTTG 59.887 37.037 13.42 13.42 46.62 2.77
497 560 7.752239 ACTGCATTAATCGTCTCAAAGAAATTG 59.248 33.333 0.00 0.00 40.58 2.32
511 574 6.349973 ACTATGTGTTGACTGCATTAATCG 57.650 37.500 0.00 0.00 0.00 3.34
523 586 7.979537 GTGGTCATATGAGTAACTATGTGTTGA 59.020 37.037 5.42 0.00 39.55 3.18
527 590 8.948631 AAAGTGGTCATATGAGTAACTATGTG 57.051 34.615 5.42 0.00 0.00 3.21
529 592 9.181805 CGTAAAGTGGTCATATGAGTAACTATG 57.818 37.037 5.42 0.00 0.00 2.23
530 593 8.358148 CCGTAAAGTGGTCATATGAGTAACTAT 58.642 37.037 5.42 0.00 0.00 2.12
531 594 7.557358 TCCGTAAAGTGGTCATATGAGTAACTA 59.443 37.037 5.42 0.00 0.00 2.24
532 595 6.379133 TCCGTAAAGTGGTCATATGAGTAACT 59.621 38.462 5.42 7.30 0.00 2.24
550 614 4.335315 GCCAATGATGATGACTTCCGTAAA 59.665 41.667 0.00 0.00 0.00 2.01
554 618 2.289820 CAGCCAATGATGATGACTTCCG 59.710 50.000 0.00 0.00 0.00 4.30
558 622 2.730934 AGCAGCCAATGATGATGACT 57.269 45.000 0.00 0.00 0.00 3.41
564 628 6.258287 GCTATATTCTCTAGCAGCCAATGATG 59.742 42.308 0.00 0.00 41.03 3.07
578 642 6.708054 CCCATTTCTTTGACGCTATATTCTCT 59.292 38.462 0.00 0.00 0.00 3.10
582 646 7.054124 TCTTCCCATTTCTTTGACGCTATATT 58.946 34.615 0.00 0.00 0.00 1.28
587 651 3.140325 TCTTCCCATTTCTTTGACGCT 57.860 42.857 0.00 0.00 0.00 5.07
589 653 5.446473 CGAAGATCTTCCCATTTCTTTGACG 60.446 44.000 26.08 9.04 36.27 4.35
590 654 5.643777 TCGAAGATCTTCCCATTTCTTTGAC 59.356 40.000 26.08 1.00 34.96 3.18
597 661 6.094186 GCTAGTTTTCGAAGATCTTCCCATTT 59.906 38.462 26.08 12.34 36.27 2.32
680 781 5.715434 AGTAGGGAAAATCTCTATCGAGC 57.285 43.478 0.00 0.00 31.14 5.03
709 810 6.380190 CGTCGGAGGGAGTATTATTTTAGAG 58.620 44.000 0.00 0.00 0.00 2.43
710 811 5.242393 CCGTCGGAGGGAGTATTATTTTAGA 59.758 44.000 11.23 0.00 0.00 2.10
711 812 5.242393 TCCGTCGGAGGGAGTATTATTTTAG 59.758 44.000 15.09 0.00 0.00 1.85
727 828 0.549950 AGAATACTCCCTCCGTCGGA 59.450 55.000 14.54 14.54 0.00 4.55
729 830 2.165845 ACAAAGAATACTCCCTCCGTCG 59.834 50.000 0.00 0.00 0.00 5.12
730 831 3.889520 ACAAAGAATACTCCCTCCGTC 57.110 47.619 0.00 0.00 0.00 4.79
731 832 3.055312 GGAACAAAGAATACTCCCTCCGT 60.055 47.826 0.00 0.00 0.00 4.69
732 833 3.197983 AGGAACAAAGAATACTCCCTCCG 59.802 47.826 0.00 0.00 0.00 4.63
733 834 4.846168 AGGAACAAAGAATACTCCCTCC 57.154 45.455 0.00 0.00 0.00 4.30
734 835 9.549078 CTATTTAGGAACAAAGAATACTCCCTC 57.451 37.037 0.00 0.00 0.00 4.30
735 836 9.059023 ACTATTTAGGAACAAAGAATACTCCCT 57.941 33.333 0.00 0.00 0.00 4.20
755 856 9.095065 CTGCCAAAACGTCTTATACTACTATTT 57.905 33.333 0.00 0.00 0.00 1.40
756 857 8.255905 ACTGCCAAAACGTCTTATACTACTATT 58.744 33.333 0.00 0.00 0.00 1.73
757 858 7.705325 CACTGCCAAAACGTCTTATACTACTAT 59.295 37.037 0.00 0.00 0.00 2.12
758 859 7.031372 CACTGCCAAAACGTCTTATACTACTA 58.969 38.462 0.00 0.00 0.00 1.82
759 860 5.867716 CACTGCCAAAACGTCTTATACTACT 59.132 40.000 0.00 0.00 0.00 2.57
760 861 5.865552 TCACTGCCAAAACGTCTTATACTAC 59.134 40.000 0.00 0.00 0.00 2.73
761 862 6.028146 TCACTGCCAAAACGTCTTATACTA 57.972 37.500 0.00 0.00 0.00 1.82
762 863 4.890088 TCACTGCCAAAACGTCTTATACT 58.110 39.130 0.00 0.00 0.00 2.12
801 914 1.078848 GCATCGGAGCTCCACTTGT 60.079 57.895 31.67 9.82 35.14 3.16
887 1004 0.317160 ACTTGGATCAGCACGACGAA 59.683 50.000 0.00 0.00 0.00 3.85
892 1009 1.136252 CGTTTGACTTGGATCAGCACG 60.136 52.381 0.00 0.00 33.45 5.34
926 1044 3.459063 GGGACGGGAGGAAGACGG 61.459 72.222 0.00 0.00 0.00 4.79
927 1045 3.459063 GGGGACGGGAGGAAGACG 61.459 72.222 0.00 0.00 0.00 4.18
1255 1373 3.621892 GACCTCGAACGGGACCACG 62.622 68.421 0.00 0.00 40.31 4.94
1269 1387 1.957877 GGAATTCGATCCGAGAGACCT 59.042 52.381 0.00 0.00 37.14 3.85
1270 1388 2.425578 GGAATTCGATCCGAGAGACC 57.574 55.000 0.00 0.00 37.14 3.85
1295 1413 3.566210 CAACCGACACCCACCCCT 61.566 66.667 0.00 0.00 0.00 4.79
1297 1415 2.902457 ATCCAACCGACACCCACCC 61.902 63.158 0.00 0.00 0.00 4.61
1298 1416 1.674322 CATCCAACCGACACCCACC 60.674 63.158 0.00 0.00 0.00 4.61
1299 1417 1.674322 CCATCCAACCGACACCCAC 60.674 63.158 0.00 0.00 0.00 4.61
1300 1418 2.753701 CCATCCAACCGACACCCA 59.246 61.111 0.00 0.00 0.00 4.51
1323 1441 1.139058 CCCAAGTGATCGAACCCCTAG 59.861 57.143 0.00 0.00 0.00 3.02
1325 1443 1.562672 CCCCAAGTGATCGAACCCCT 61.563 60.000 0.00 0.00 0.00 4.79
1341 1459 4.026052 AGATGTTTCACAATTCATCCCCC 58.974 43.478 0.00 0.00 37.84 5.40
1360 1478 2.114616 CTCCTCCTACAAGCACCAGAT 58.885 52.381 0.00 0.00 0.00 2.90
1372 1490 3.447586 CGAGACCAAATTCACTCCTCCTA 59.552 47.826 0.00 0.00 0.00 2.94
1377 1495 1.993370 CGACGAGACCAAATTCACTCC 59.007 52.381 0.00 0.00 0.00 3.85
1397 1515 0.741221 GCATGACCACCCTCGAAGTC 60.741 60.000 0.00 0.00 0.00 3.01
1398 1516 1.194781 AGCATGACCACCCTCGAAGT 61.195 55.000 0.00 0.00 0.00 3.01
1399 1517 0.742281 CAGCATGACCACCCTCGAAG 60.742 60.000 0.00 0.00 39.69 3.79
1400 1518 1.296392 CAGCATGACCACCCTCGAA 59.704 57.895 0.00 0.00 39.69 3.71
1402 1520 2.821366 GCAGCATGACCACCCTCG 60.821 66.667 0.00 0.00 39.69 4.63
1403 1521 1.077212 ATGCAGCATGACCACCCTC 60.077 57.895 7.23 0.00 39.69 4.30
1404 1522 1.379443 CATGCAGCATGACCACCCT 60.379 57.895 28.75 0.00 43.81 4.34
1487 1614 4.863689 CAGTCAGACTACAGAAATCAGCAG 59.136 45.833 1.67 0.00 0.00 4.24
1499 1626 4.004314 TCACTACAGCTCAGTCAGACTAC 58.996 47.826 1.67 0.00 0.00 2.73
1537 1664 6.845758 AGCACCAAAGTAGTACTACACATA 57.154 37.500 29.87 0.00 38.48 2.29
1561 1688 1.681166 GCCCACAGAGATCATTGCTGT 60.681 52.381 0.00 0.07 43.16 4.40
1565 1692 2.118313 TGTGCCCACAGAGATCATTG 57.882 50.000 0.00 0.00 36.21 2.82
1567 1694 5.250082 ACATATATGTGCCCACAGAGATCAT 59.750 40.000 17.60 0.00 45.48 2.45
1593 1720 7.502895 ACGAACAGGAGATATATCAGTTACAGT 59.497 37.037 15.08 10.61 0.00 3.55
1594 1721 7.877003 ACGAACAGGAGATATATCAGTTACAG 58.123 38.462 15.08 10.15 0.00 2.74
1595 1722 7.818997 ACGAACAGGAGATATATCAGTTACA 57.181 36.000 15.08 0.00 0.00 2.41
1596 1723 9.530633 AAAACGAACAGGAGATATATCAGTTAC 57.469 33.333 15.08 0.00 0.00 2.50
1609 1738 5.290643 TGAAAATTGCAAAAACGAACAGGAG 59.709 36.000 1.71 0.00 0.00 3.69
1614 1743 4.723390 GTGCTGAAAATTGCAAAAACGAAC 59.277 37.500 1.71 0.00 41.10 3.95
1711 2157 5.153513 CCAACATTGTTGTCGGTATTCTTG 58.846 41.667 24.01 4.65 34.06 3.02
1723 2169 3.573538 TGACAATCCTCCCAACATTGTTG 59.426 43.478 20.31 20.31 40.15 3.33
1726 2172 4.813027 CTTTGACAATCCTCCCAACATTG 58.187 43.478 0.00 0.00 34.29 2.82
1747 2193 1.344763 GGCCGATCCAATACTACTGCT 59.655 52.381 0.00 0.00 34.01 4.24
1802 2248 0.890996 GTTGAGGCCACAGGTTCAGG 60.891 60.000 5.01 0.00 0.00 3.86
1828 2274 3.069300 AGAATCCCATCACACGATCAGAG 59.931 47.826 0.00 0.00 0.00 3.35
1927 2373 1.133513 ACATGCACTCCCAGGTTGAAA 60.134 47.619 0.00 0.00 0.00 2.69
1952 2398 6.093357 CCTTTCTGAATAAGAAGCTTGAGACC 59.907 42.308 2.10 0.00 45.64 3.85
2027 2473 4.949121 AGAGAAATACCAGTCCCACTACT 58.051 43.478 0.00 0.00 0.00 2.57
2600 3090 1.279496 TGGATGCTAACTGCTCCACT 58.721 50.000 0.00 0.00 41.01 4.00
2609 3099 1.532868 GGTGCGATGATGGATGCTAAC 59.467 52.381 0.00 0.00 0.00 2.34
2738 3228 6.830114 AAAGTTCAGTTCAAAGTCGAGTAG 57.170 37.500 0.00 0.00 0.00 2.57
2743 3233 6.083630 TGAACAAAAGTTCAGTTCAAAGTCG 58.916 36.000 16.33 0.00 45.95 4.18
2813 3303 1.200716 CAAGATGGTTCGCAACATGCT 59.799 47.619 0.00 0.00 42.25 3.79
2911 3401 4.429854 ACTTCTGAGCTTCTTTGAAGGT 57.570 40.909 11.14 11.14 38.60 3.50
3000 3490 7.488792 GCCTGGAAAAAGTAAAACGAACTAAAA 59.511 33.333 0.00 0.00 0.00 1.52
3112 3602 3.053019 TGGAGGATGTATTCCCAATTGCA 60.053 43.478 0.00 0.00 46.81 4.08
3148 3638 2.846039 CAATGCCAGATTGCTCAGAC 57.154 50.000 0.00 0.00 0.00 3.51
3544 4034 2.645838 AACACCTCATCAGCAACTGT 57.354 45.000 0.00 0.00 32.61 3.55
3568 4058 8.641499 TTCATTTCTGGTTCAATAACAACAAC 57.359 30.769 0.00 0.00 37.34 3.32
3569 4059 8.474025 ACTTCATTTCTGGTTCAATAACAACAA 58.526 29.630 0.00 0.00 37.34 2.83
3571 4061 8.871686 AACTTCATTTCTGGTTCAATAACAAC 57.128 30.769 0.00 0.00 37.34 3.32
3572 4062 9.883142 AAAACTTCATTTCTGGTTCAATAACAA 57.117 25.926 0.00 0.00 37.34 2.83
3577 4067 8.370182 AGCATAAAACTTCATTTCTGGTTCAAT 58.630 29.630 0.00 0.00 0.00 2.57
3578 4068 7.725251 AGCATAAAACTTCATTTCTGGTTCAA 58.275 30.769 0.00 0.00 0.00 2.69
3617 4107 8.347004 TCTGAAAATGAAACCATATAAGCACA 57.653 30.769 0.00 0.00 0.00 4.57
3677 4167 0.240945 GCATGAACCCAGACGTTTGG 59.759 55.000 18.00 18.00 38.00 3.28
3753 4243 2.057137 TTGCTGCTTTTCTCCACTGT 57.943 45.000 0.00 0.00 0.00 3.55
3800 4290 4.461081 TCTTTCTGAGTGGTAGAAGAGCTC 59.539 45.833 5.27 5.27 35.74 4.09
3927 4417 8.128322 TCTAGAAGATGTTAGATATTGGGAGC 57.872 38.462 0.00 0.00 0.00 4.70
3942 4432 4.428294 TGGGCCTGAAATCTAGAAGATG 57.572 45.455 4.53 0.00 34.65 2.90
4139 4629 8.377034 AGAATGCAATATCTTAGCTCAGAGATT 58.623 33.333 11.17 11.17 35.52 2.40
4443 4942 6.504398 TCGCCAGTAATGTCTAAGAATACAG 58.496 40.000 0.00 0.00 0.00 2.74
4505 5004 7.284074 TGTTTATCAGTTCTGGACCTTTTACA 58.716 34.615 0.00 0.00 0.00 2.41
4600 5103 5.747675 TGTGCATATTTTCATGGCAATTACG 59.252 36.000 0.00 0.00 0.00 3.18
4807 5384 7.751768 AAATAAAGAGGGAAAACTGAGACAG 57.248 36.000 0.00 0.00 37.52 3.51
4877 5694 4.530553 TCAATCTCCACCAGCAACTAGTAA 59.469 41.667 0.00 0.00 0.00 2.24
4878 5695 4.093743 TCAATCTCCACCAGCAACTAGTA 58.906 43.478 0.00 0.00 0.00 1.82
4879 5696 2.906389 TCAATCTCCACCAGCAACTAGT 59.094 45.455 0.00 0.00 0.00 2.57
4968 5785 7.232534 TGGTTTCCTTTAATGTTACTGCATCTT 59.767 33.333 0.00 0.00 0.00 2.40
5011 5828 4.505742 GCCCCAATAATGAAGAGGTCCTAG 60.506 50.000 0.00 0.00 0.00 3.02
5311 6128 3.961860 CCGCGCATAATGCATAAATATCG 59.038 43.478 8.75 5.67 45.36 2.92
5388 6205 5.052172 GCAGCTATGAAAAACATAATGTGCG 60.052 40.000 0.00 0.00 40.39 5.34
5412 6230 0.793478 CGTGTAAGTCCGACAGAGCG 60.793 60.000 0.40 0.00 0.00 5.03
5610 6428 2.565841 GAGATATCACCCAACACCTGC 58.434 52.381 5.32 0.00 0.00 4.85
5738 6556 5.316987 AGTTGATTAGTTGGGAGGTGAAAG 58.683 41.667 0.00 0.00 0.00 2.62
5856 6674 0.729690 GCAAGGAGAAACCATCGAGC 59.270 55.000 0.00 0.00 42.04 5.03
5930 6748 5.180492 TGCTCGGTAAAACTAGAAAACATGG 59.820 40.000 0.00 0.00 0.00 3.66
5987 6805 9.901172 AACCTACTTCTCAAAATTCGGTTATAT 57.099 29.630 0.00 0.00 31.06 0.86
5988 6806 9.158233 CAACCTACTTCTCAAAATTCGGTTATA 57.842 33.333 0.00 0.00 31.59 0.98
5989 6807 7.664318 ACAACCTACTTCTCAAAATTCGGTTAT 59.336 33.333 0.00 0.00 31.59 1.89
6062 6899 6.755141 GCATTGTAGTTTACGTAGATCCTGAA 59.245 38.462 0.00 0.00 0.00 3.02
6094 6931 9.944663 GTGTACTGTTGTAATTTCATCTTTGAA 57.055 29.630 0.00 0.00 40.09 2.69
6224 7061 9.353999 GTTACAATTTTTCCATGTCTTATGTCC 57.646 33.333 0.00 0.00 0.00 4.02
6271 8853 3.480470 CCCTGGTGATTAGGCATGTTAG 58.520 50.000 0.00 0.00 33.86 2.34
6298 8880 6.303839 TGCTCTTTATTTTGTCCTACACCTT 58.696 36.000 0.00 0.00 0.00 3.50
6303 8885 9.952188 GGAATTATGCTCTTTATTTTGTCCTAC 57.048 33.333 0.00 0.00 0.00 3.18
6304 8886 9.920946 AGGAATTATGCTCTTTATTTTGTCCTA 57.079 29.630 0.00 0.00 0.00 2.94
6357 8940 5.286558 GCTTGCGTTTGTACTGTGTTAAAAA 59.713 36.000 0.00 0.00 0.00 1.94
6358 8941 4.794246 GCTTGCGTTTGTACTGTGTTAAAA 59.206 37.500 0.00 0.00 0.00 1.52
6359 8942 4.344448 GCTTGCGTTTGTACTGTGTTAAA 58.656 39.130 0.00 0.00 0.00 1.52
6360 8943 3.544440 CGCTTGCGTTTGTACTGTGTTAA 60.544 43.478 6.86 0.00 0.00 2.01
6361 8944 2.033577 CGCTTGCGTTTGTACTGTGTTA 60.034 45.455 6.86 0.00 0.00 2.41
6362 8945 1.267832 CGCTTGCGTTTGTACTGTGTT 60.268 47.619 6.86 0.00 0.00 3.32
6363 8946 0.303493 CGCTTGCGTTTGTACTGTGT 59.697 50.000 6.86 0.00 0.00 3.72
6364 8947 0.991770 GCGCTTGCGTTTGTACTGTG 60.992 55.000 16.38 0.00 0.00 3.66
6365 8948 1.157870 AGCGCTTGCGTTTGTACTGT 61.158 50.000 16.38 0.00 45.69 3.55
6366 8949 0.451135 GAGCGCTTGCGTTTGTACTG 60.451 55.000 13.26 0.00 45.69 2.74
6367 8950 0.878523 TGAGCGCTTGCGTTTGTACT 60.879 50.000 13.26 3.73 45.69 2.73
6368 8951 0.165944 ATGAGCGCTTGCGTTTGTAC 59.834 50.000 13.26 0.00 45.69 2.90
6369 8952 1.392168 GTATGAGCGCTTGCGTTTGTA 59.608 47.619 13.26 5.22 45.69 2.41
6370 8953 0.165944 GTATGAGCGCTTGCGTTTGT 59.834 50.000 13.26 6.11 45.69 2.83
6371 8954 0.165727 TGTATGAGCGCTTGCGTTTG 59.834 50.000 13.26 0.00 45.69 2.93
6372 8955 1.086696 ATGTATGAGCGCTTGCGTTT 58.913 45.000 13.26 5.45 45.69 3.60
6373 8956 1.593006 GTATGTATGAGCGCTTGCGTT 59.407 47.619 13.26 10.61 45.69 4.84
6374 8957 1.209128 GTATGTATGAGCGCTTGCGT 58.791 50.000 13.26 3.97 45.69 5.24
6375 8958 1.208259 TGTATGTATGAGCGCTTGCG 58.792 50.000 13.26 10.90 45.69 4.85
6376 8959 2.663879 GCATGTATGTATGAGCGCTTGC 60.664 50.000 13.26 9.78 39.58 4.01
6377 8960 2.545106 TGCATGTATGTATGAGCGCTTG 59.455 45.455 13.26 2.09 0.00 4.01
6378 8961 2.837498 TGCATGTATGTATGAGCGCTT 58.163 42.857 13.26 0.00 0.00 4.68
6379 8962 2.531522 TGCATGTATGTATGAGCGCT 57.468 45.000 11.27 11.27 0.00 5.92
6380 8963 3.679502 TGTATGCATGTATGTATGAGCGC 59.320 43.478 10.16 0.00 34.85 5.92
6381 8964 4.925646 AGTGTATGCATGTATGTATGAGCG 59.074 41.667 10.16 0.00 34.85 5.03
6382 8965 5.928264 TGAGTGTATGCATGTATGTATGAGC 59.072 40.000 10.16 0.00 34.85 4.26
6383 8966 6.367149 GGTGAGTGTATGCATGTATGTATGAG 59.633 42.308 10.16 0.00 34.85 2.90
6384 8967 6.223120 GGTGAGTGTATGCATGTATGTATGA 58.777 40.000 10.16 0.00 34.85 2.15
6385 8968 5.409520 GGGTGAGTGTATGCATGTATGTATG 59.590 44.000 10.16 0.00 34.85 2.39
6386 8969 5.513094 GGGGTGAGTGTATGCATGTATGTAT 60.513 44.000 10.16 1.26 36.98 2.29
6387 8970 4.202315 GGGGTGAGTGTATGCATGTATGTA 60.202 45.833 10.16 0.00 0.00 2.29
6388 8971 3.433598 GGGGTGAGTGTATGCATGTATGT 60.434 47.826 10.16 0.00 0.00 2.29
6389 8972 3.141398 GGGGTGAGTGTATGCATGTATG 58.859 50.000 10.16 0.00 0.00 2.39
6390 8973 3.048600 AGGGGTGAGTGTATGCATGTAT 58.951 45.455 10.16 0.82 0.00 2.29
6391 8974 2.477245 AGGGGTGAGTGTATGCATGTA 58.523 47.619 10.16 0.00 0.00 2.29
6392 8975 1.289160 AGGGGTGAGTGTATGCATGT 58.711 50.000 10.16 0.00 0.00 3.21
6393 8976 3.071457 TCATAGGGGTGAGTGTATGCATG 59.929 47.826 10.16 0.00 0.00 4.06
6394 8977 3.317406 TCATAGGGGTGAGTGTATGCAT 58.683 45.455 3.79 3.79 0.00 3.96
6395 8978 2.758130 TCATAGGGGTGAGTGTATGCA 58.242 47.619 0.00 0.00 0.00 3.96
6396 8979 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
6397 8980 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
6398 8981 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
6399 8982 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
6400 8983 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
6401 8984 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
6402 8985 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
6403 8986 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
6404 8987 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
6405 8988 1.024579 GGTGTGCGTTCATAGGGGTG 61.025 60.000 0.00 0.00 0.00 4.61
6406 8989 1.298667 GGTGTGCGTTCATAGGGGT 59.701 57.895 0.00 0.00 0.00 4.95
6407 8990 1.451387 GGGTGTGCGTTCATAGGGG 60.451 63.158 0.00 0.00 0.00 4.79
6408 8991 0.828022 TAGGGTGTGCGTTCATAGGG 59.172 55.000 0.00 0.00 0.00 3.53
6409 8992 1.480954 ACTAGGGTGTGCGTTCATAGG 59.519 52.381 0.00 0.00 0.00 2.57
6410 8993 2.481449 GGACTAGGGTGTGCGTTCATAG 60.481 54.545 0.00 0.00 0.00 2.23
6411 8994 1.479323 GGACTAGGGTGTGCGTTCATA 59.521 52.381 0.00 0.00 0.00 2.15
6412 8995 0.249398 GGACTAGGGTGTGCGTTCAT 59.751 55.000 0.00 0.00 0.00 2.57
6413 8996 0.830444 AGGACTAGGGTGTGCGTTCA 60.830 55.000 0.00 0.00 33.42 3.18
6414 8997 1.180029 TAGGACTAGGGTGTGCGTTC 58.820 55.000 0.00 0.00 33.42 3.95
6415 8998 1.480954 CATAGGACTAGGGTGTGCGTT 59.519 52.381 0.00 0.00 33.42 4.84
6416 8999 1.112113 CATAGGACTAGGGTGTGCGT 58.888 55.000 0.00 0.00 33.42 5.24
6417 9000 1.338337 CTCATAGGACTAGGGTGTGCG 59.662 57.143 0.00 0.00 33.42 5.34
6418 9001 1.069358 GCTCATAGGACTAGGGTGTGC 59.931 57.143 0.00 0.00 0.00 4.57
6419 9002 2.101582 GTGCTCATAGGACTAGGGTGTG 59.898 54.545 0.00 0.00 33.44 3.82
6420 9003 2.389715 GTGCTCATAGGACTAGGGTGT 58.610 52.381 0.00 0.00 33.44 4.16
6421 9004 1.689273 GGTGCTCATAGGACTAGGGTG 59.311 57.143 0.00 0.00 36.73 4.61
6422 9005 1.576272 AGGTGCTCATAGGACTAGGGT 59.424 52.381 0.00 0.00 36.73 4.34
6423 9006 2.243810 GAGGTGCTCATAGGACTAGGG 58.756 57.143 0.00 0.00 36.73 3.53
6424 9007 2.243810 GGAGGTGCTCATAGGACTAGG 58.756 57.143 0.00 0.00 36.73 3.02
6425 9008 1.883275 CGGAGGTGCTCATAGGACTAG 59.117 57.143 0.00 0.00 36.73 2.57
6426 9009 1.493446 TCGGAGGTGCTCATAGGACTA 59.507 52.381 0.00 0.00 36.73 2.59
6427 9010 0.259065 TCGGAGGTGCTCATAGGACT 59.741 55.000 0.00 0.00 36.73 3.85
6428 9011 0.671251 CTCGGAGGTGCTCATAGGAC 59.329 60.000 0.00 0.00 35.67 3.85
6429 9012 0.551396 TCTCGGAGGTGCTCATAGGA 59.449 55.000 4.96 0.00 31.08 2.94
6430 9013 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
6431 9014 0.958091 CCTCTCGGAGGTGCTCATAG 59.042 60.000 4.96 0.00 44.25 2.23
6432 9015 3.117657 CCTCTCGGAGGTGCTCATA 57.882 57.895 4.96 0.00 44.25 2.15
6433 9016 3.947173 CCTCTCGGAGGTGCTCAT 58.053 61.111 4.96 0.00 44.25 2.90
6440 9023 8.772069 ATCTCAAGATAATATGCCTCTCGGAGG 61.772 44.444 13.79 13.79 41.78 4.30
6441 9024 5.417266 TCTCAAGATAATATGCCTCTCGGAG 59.583 44.000 0.00 0.00 0.00 4.63
6442 9025 5.325239 TCTCAAGATAATATGCCTCTCGGA 58.675 41.667 0.00 0.00 0.00 4.55
6443 9026 5.651387 TCTCAAGATAATATGCCTCTCGG 57.349 43.478 0.00 0.00 0.00 4.63
6444 9027 9.081997 GTAAATCTCAAGATAATATGCCTCTCG 57.918 37.037 0.00 0.00 33.73 4.04
6445 9028 9.081997 CGTAAATCTCAAGATAATATGCCTCTC 57.918 37.037 0.00 0.00 33.73 3.20
6446 9029 8.807118 TCGTAAATCTCAAGATAATATGCCTCT 58.193 33.333 0.00 0.00 33.73 3.69
6447 9030 8.988064 TCGTAAATCTCAAGATAATATGCCTC 57.012 34.615 0.00 0.00 33.73 4.70
6448 9031 9.429359 CTTCGTAAATCTCAAGATAATATGCCT 57.571 33.333 0.00 0.00 33.73 4.75
6449 9032 9.209175 ACTTCGTAAATCTCAAGATAATATGCC 57.791 33.333 0.00 0.00 33.73 4.40
6454 9037 9.482627 GGATGACTTCGTAAATCTCAAGATAAT 57.517 33.333 0.00 0.00 33.73 1.28
6455 9038 8.474831 TGGATGACTTCGTAAATCTCAAGATAA 58.525 33.333 0.00 0.00 33.73 1.75
6456 9039 8.007405 TGGATGACTTCGTAAATCTCAAGATA 57.993 34.615 0.00 0.00 33.73 1.98
6457 9040 6.878317 TGGATGACTTCGTAAATCTCAAGAT 58.122 36.000 0.00 0.00 36.07 2.40
6458 9041 6.280855 TGGATGACTTCGTAAATCTCAAGA 57.719 37.500 0.00 0.00 0.00 3.02
6459 9042 6.183360 GGTTGGATGACTTCGTAAATCTCAAG 60.183 42.308 0.00 0.00 0.00 3.02
6460 9043 5.642063 GGTTGGATGACTTCGTAAATCTCAA 59.358 40.000 0.00 0.00 0.00 3.02
6461 9044 5.175859 GGTTGGATGACTTCGTAAATCTCA 58.824 41.667 0.00 0.00 0.00 3.27
6462 9045 5.175859 TGGTTGGATGACTTCGTAAATCTC 58.824 41.667 0.00 0.00 0.00 2.75
6463 9046 5.160607 TGGTTGGATGACTTCGTAAATCT 57.839 39.130 0.00 0.00 0.00 2.40
6464 9047 6.202954 CCTATGGTTGGATGACTTCGTAAATC 59.797 42.308 0.00 0.00 0.00 2.17
6465 9048 6.055588 CCTATGGTTGGATGACTTCGTAAAT 58.944 40.000 0.00 0.00 0.00 1.40
6466 9049 5.046159 ACCTATGGTTGGATGACTTCGTAAA 60.046 40.000 0.00 0.00 27.29 2.01
6467 9050 4.468510 ACCTATGGTTGGATGACTTCGTAA 59.531 41.667 0.00 0.00 27.29 3.18
6468 9051 4.028131 ACCTATGGTTGGATGACTTCGTA 58.972 43.478 0.00 0.00 27.29 3.43
6469 9052 2.838202 ACCTATGGTTGGATGACTTCGT 59.162 45.455 0.00 0.00 27.29 3.85
6470 9053 3.543680 ACCTATGGTTGGATGACTTCG 57.456 47.619 0.00 0.00 27.29 3.79
6491 9074 8.119629 AATCAAATCGATCTTATTCGGGAACCA 61.120 37.037 0.00 0.00 41.29 3.67
6492 9075 6.204882 AATCAAATCGATCTTATTCGGGAACC 59.795 38.462 0.00 0.00 38.37 3.62
6493 9076 6.787085 ATCAAATCGATCTTATTCGGGAAC 57.213 37.500 0.00 0.00 39.56 3.62
6494 9077 6.765989 ACAATCAAATCGATCTTATTCGGGAA 59.234 34.615 0.00 0.00 39.56 3.97
6495 9078 6.288294 ACAATCAAATCGATCTTATTCGGGA 58.712 36.000 0.00 0.00 39.56 5.14
6496 9079 6.545504 ACAATCAAATCGATCTTATTCGGG 57.454 37.500 0.00 0.00 39.56 5.14
6497 9080 8.122330 TCAAACAATCAAATCGATCTTATTCGG 58.878 33.333 0.00 0.00 39.56 4.30
6498 9081 9.489393 TTCAAACAATCAAATCGATCTTATTCG 57.511 29.630 0.00 0.00 40.46 3.34
6511 9094 7.448420 TCCCTATGCATTTTCAAACAATCAAA 58.552 30.769 3.54 0.00 0.00 2.69
6545 9128 4.466726 ACTGAGGTACATAAACTCTCACCC 59.533 45.833 0.00 0.00 32.02 4.61
6548 9131 6.266786 TCACAACTGAGGTACATAAACTCTCA 59.733 38.462 0.00 0.00 33.96 3.27
6556 9139 3.118408 GCCCATCACAACTGAGGTACATA 60.118 47.826 0.00 0.00 0.00 2.29
6557 9140 2.356125 GCCCATCACAACTGAGGTACAT 60.356 50.000 0.00 0.00 0.00 2.29
6558 9141 1.003118 GCCCATCACAACTGAGGTACA 59.997 52.381 0.00 0.00 0.00 2.90
6559 9142 1.739067 GCCCATCACAACTGAGGTAC 58.261 55.000 0.00 0.00 0.00 3.34
6577 9494 1.951631 GATAAGAGCTCGGGCACGC 60.952 63.158 11.40 0.00 41.70 5.34
6583 9500 2.543012 TCGACTAACGATAAGAGCTCGG 59.457 50.000 8.37 0.00 46.45 4.63
6596 9513 5.522824 CCCCATAAGCTTTAACTCGACTAAC 59.477 44.000 3.20 0.00 0.00 2.34
6604 9521 8.164070 CCTATATCAACCCCATAAGCTTTAACT 58.836 37.037 3.20 0.00 0.00 2.24
6606 9523 8.052621 ACCTATATCAACCCCATAAGCTTTAA 57.947 34.615 3.20 0.00 0.00 1.52
6611 9528 5.876357 TGAACCTATATCAACCCCATAAGC 58.124 41.667 0.00 0.00 0.00 3.09
6613 9530 6.334237 ACCATGAACCTATATCAACCCCATAA 59.666 38.462 0.00 0.00 0.00 1.90
6616 9533 4.051478 ACCATGAACCTATATCAACCCCA 58.949 43.478 0.00 0.00 0.00 4.96
6620 9537 6.128282 CGGCATTACCATGAACCTATATCAAC 60.128 42.308 0.00 0.00 39.03 3.18
6623 9540 5.730550 TCGGCATTACCATGAACCTATATC 58.269 41.667 0.00 0.00 39.03 1.63
6625 9542 5.247337 TCATCGGCATTACCATGAACCTATA 59.753 40.000 0.00 0.00 39.03 1.31
6628 9580 2.172505 TCATCGGCATTACCATGAACCT 59.827 45.455 0.00 0.00 39.03 3.50
6643 9595 1.364626 GGTGCAGAGCAACTCATCGG 61.365 60.000 0.00 0.00 43.73 4.18
6654 9606 0.745845 GGTGGCTGTATGGTGCAGAG 60.746 60.000 0.00 0.00 36.12 3.35
6656 9608 1.750399 GGGTGGCTGTATGGTGCAG 60.750 63.158 0.00 0.00 37.06 4.41
6657 9609 2.196997 GAGGGTGGCTGTATGGTGCA 62.197 60.000 0.00 0.00 0.00 4.57
6662 9614 1.141053 GGTTAGGAGGGTGGCTGTATG 59.859 57.143 0.00 0.00 0.00 2.39
6668 9620 1.146263 CGATGGTTAGGAGGGTGGC 59.854 63.158 0.00 0.00 0.00 5.01
6669 9621 1.134491 GTTCGATGGTTAGGAGGGTGG 60.134 57.143 0.00 0.00 0.00 4.61
6672 9624 1.134491 GTGGTTCGATGGTTAGGAGGG 60.134 57.143 0.00 0.00 0.00 4.30
6693 9645 0.817634 TTGCCTCGGTGAACCAACAG 60.818 55.000 0.00 0.00 35.14 3.16
6695 9647 1.515521 CCTTGCCTCGGTGAACCAAC 61.516 60.000 0.00 0.00 35.14 3.77
6698 9650 2.359975 CCCTTGCCTCGGTGAACC 60.360 66.667 0.00 0.00 0.00 3.62
6717 9669 6.869421 AACTGAAAACAGACATTTTTCGTG 57.131 33.333 0.00 0.00 43.18 4.35
6719 9671 6.902948 TCGTAACTGAAAACAGACATTTTTCG 59.097 34.615 0.00 0.00 43.18 3.46
6729 9681 3.361339 CCGTTCGTCGTAACTGAAAACAG 60.361 47.826 0.00 0.00 37.94 3.16
6730 9682 2.535166 CCGTTCGTCGTAACTGAAAACA 59.465 45.455 0.00 0.00 37.94 2.83
6731 9683 2.535574 ACCGTTCGTCGTAACTGAAAAC 59.464 45.455 0.00 0.00 37.94 2.43
6732 9684 2.535166 CACCGTTCGTCGTAACTGAAAA 59.465 45.455 0.00 0.00 37.94 2.29
6733 9685 2.118683 CACCGTTCGTCGTAACTGAAA 58.881 47.619 0.00 0.00 37.94 2.69
6734 9686 1.757574 CACCGTTCGTCGTAACTGAA 58.242 50.000 0.00 0.00 37.94 3.02
6735 9687 0.661187 GCACCGTTCGTCGTAACTGA 60.661 55.000 0.00 0.00 37.94 3.41
6736 9688 0.935831 TGCACCGTTCGTCGTAACTG 60.936 55.000 0.00 0.00 37.94 3.16
6737 9689 0.936297 GTGCACCGTTCGTCGTAACT 60.936 55.000 5.22 0.00 37.94 2.24
6740 9692 1.081906 GAGTGCACCGTTCGTCGTA 60.082 57.895 14.63 0.00 37.94 3.43
6741 9693 2.354305 GAGTGCACCGTTCGTCGT 60.354 61.111 14.63 0.00 37.94 4.34
6743 9695 0.865769 AAATGAGTGCACCGTTCGTC 59.134 50.000 14.63 3.69 0.00 4.20
6744 9696 0.865769 GAAATGAGTGCACCGTTCGT 59.134 50.000 14.63 3.07 0.00 3.85
6745 9697 1.148310 AGAAATGAGTGCACCGTTCG 58.852 50.000 14.63 0.00 0.00 3.95
6747 9699 2.290641 GTCAAGAAATGAGTGCACCGTT 59.709 45.455 14.63 9.93 39.19 4.44
6748 9700 1.873591 GTCAAGAAATGAGTGCACCGT 59.126 47.619 14.63 3.57 39.19 4.83
6749 9701 1.872952 TGTCAAGAAATGAGTGCACCG 59.127 47.619 14.63 0.00 39.19 4.94
6751 9703 4.863491 ACAATGTCAAGAAATGAGTGCAC 58.137 39.130 9.40 9.40 39.19 4.57
6753 9705 5.152097 CAGACAATGTCAAGAAATGAGTGC 58.848 41.667 16.38 0.00 39.19 4.40
6755 9707 6.949352 AACAGACAATGTCAAGAAATGAGT 57.051 33.333 16.38 0.00 43.00 3.41
6756 9708 7.916977 TGAAAACAGACAATGTCAAGAAATGAG 59.083 33.333 16.38 0.00 43.00 2.90
6757 9709 7.770201 TGAAAACAGACAATGTCAAGAAATGA 58.230 30.769 16.38 0.00 43.00 2.57
6758 9710 7.168637 CCTGAAAACAGACAATGTCAAGAAATG 59.831 37.037 16.38 6.35 43.00 2.32
6759 9711 7.147846 ACCTGAAAACAGACAATGTCAAGAAAT 60.148 33.333 16.38 0.00 43.00 2.17
6760 9712 6.152661 ACCTGAAAACAGACAATGTCAAGAAA 59.847 34.615 16.38 0.00 43.00 2.52
6761 9713 5.652014 ACCTGAAAACAGACAATGTCAAGAA 59.348 36.000 16.38 0.00 43.00 2.52
6762 9714 5.192927 ACCTGAAAACAGACAATGTCAAGA 58.807 37.500 16.38 0.00 43.00 3.02
6763 9715 5.505173 ACCTGAAAACAGACAATGTCAAG 57.495 39.130 16.38 9.97 43.00 3.02
6766 9718 4.044426 GCAACCTGAAAACAGACAATGTC 58.956 43.478 5.02 5.02 43.00 3.06
6767 9719 3.701040 AGCAACCTGAAAACAGACAATGT 59.299 39.130 0.00 0.00 46.97 2.71
6768 9720 4.311816 AGCAACCTGAAAACAGACAATG 57.688 40.909 0.00 0.00 0.00 2.82
6769 9721 5.221244 GGTAAGCAACCTGAAAACAGACAAT 60.221 40.000 0.00 0.00 45.75 2.71
6770 9722 4.097286 GGTAAGCAACCTGAAAACAGACAA 59.903 41.667 0.00 0.00 45.75 3.18
6771 9723 3.630312 GGTAAGCAACCTGAAAACAGACA 59.370 43.478 0.00 0.00 45.75 3.41
6772 9724 4.224715 GGTAAGCAACCTGAAAACAGAC 57.775 45.455 0.00 0.00 45.75 3.51
6787 9739 9.784767 AGCGTATTTTTATCCAATGCGGTAAGC 62.785 40.741 6.13 0.00 44.85 3.09
6788 9740 5.623673 GCGTATTTTTATCCAATGCGGTAAG 59.376 40.000 5.50 0.00 39.34 2.34
6789 9741 5.297278 AGCGTATTTTTATCCAATGCGGTAA 59.703 36.000 6.13 0.00 44.85 2.85
6792 9744 4.223320 AGCGTATTTTTATCCAATGCGG 57.777 40.909 5.50 0.00 39.34 5.69
6793 9745 7.096640 CCTTTTAGCGTATTTTTATCCAATGCG 60.097 37.037 0.00 0.00 41.16 4.73
6794 9746 7.918562 TCCTTTTAGCGTATTTTTATCCAATGC 59.081 33.333 0.00 0.00 0.00 3.56
6795 9747 9.796120 TTCCTTTTAGCGTATTTTTATCCAATG 57.204 29.630 0.00 0.00 0.00 2.82
6810 9861 6.481644 AGAGAGCAGATAATTTCCTTTTAGCG 59.518 38.462 0.00 0.00 0.00 4.26
6849 9904 2.074576 GTTACGGCAAAAGAGGGAGAC 58.925 52.381 0.00 0.00 0.00 3.36
6937 9992 2.047179 GGGGTTGAGAGCCACGAC 60.047 66.667 0.00 0.00 45.46 4.34
6943 9998 1.677637 CTACGGGAGGGGTTGAGAGC 61.678 65.000 0.00 0.00 0.00 4.09
7071 10126 3.316573 GAGAGGCGGAGGGTGTTGG 62.317 68.421 0.00 0.00 0.00 3.77
7074 10129 2.997897 GTGAGAGGCGGAGGGTGT 60.998 66.667 0.00 0.00 0.00 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.