Multiple sequence alignment - TraesCS2A01G455700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G455700 chr2A 100.000 5982 0 0 1 5982 704763488 704757507 0.000000e+00 11047.0
1 TraesCS2A01G455700 chr2A 89.503 181 12 4 781 961 704762283 704762110 7.800000e-54 222.0
2 TraesCS2A01G455700 chr2A 89.503 181 12 4 1206 1379 704762708 704762528 7.800000e-54 222.0
3 TraesCS2A01G455700 chr2A 93.269 104 4 3 3838 3938 712843636 712843533 3.730000e-32 150.0
4 TraesCS2A01G455700 chr2D 94.227 2685 93 18 1205 3852 564081135 564078476 0.000000e+00 4043.0
5 TraesCS2A01G455700 chr2D 94.210 1278 70 3 3939 5216 564078472 564077199 0.000000e+00 1947.0
6 TraesCS2A01G455700 chr2D 87.963 756 52 24 1 735 564081889 564081152 0.000000e+00 856.0
7 TraesCS2A01G455700 chr2D 91.892 259 18 3 5461 5718 564077201 564076945 5.700000e-95 359.0
8 TraesCS2A01G455700 chr2D 93.519 216 10 1 5723 5934 564076894 564076679 9.670000e-83 318.0
9 TraesCS2A01G455700 chr2D 91.444 187 11 4 775 961 564081140 564080959 9.950000e-63 252.0
10 TraesCS2A01G455700 chr2B 92.849 1748 76 16 683 2411 675341670 675339953 0.000000e+00 2490.0
11 TraesCS2A01G455700 chr2B 95.065 1459 48 10 2408 3852 675339768 675338320 0.000000e+00 2274.0
12 TraesCS2A01G455700 chr2B 96.415 1088 38 1 3939 5025 675338316 675337229 0.000000e+00 1792.0
13 TraesCS2A01G455700 chr2B 83.299 491 31 20 128 582 675342171 675341696 7.220000e-109 405.0
14 TraesCS2A01G455700 chr2B 90.476 252 21 3 5461 5711 675336985 675336736 4.470000e-86 329.0
15 TraesCS2A01G455700 chr2B 95.732 164 7 0 5771 5934 675336619 675336456 1.280000e-66 265.0
16 TraesCS2A01G455700 chr2B 88.360 189 7 4 5028 5216 675337156 675336983 4.700000e-51 213.0
17 TraesCS2A01G455700 chr2B 85.714 189 13 7 781 961 675341173 675340991 2.850000e-43 187.0
18 TraesCS2A01G455700 chr2B 98.113 106 2 0 1 106 675342563 675342458 1.020000e-42 185.0
19 TraesCS2A01G455700 chr2B 98.876 89 1 0 3850 3938 479585234 479585322 6.210000e-35 159.0
20 TraesCS2A01G455700 chr2B 100.000 51 0 0 5932 5982 498308507 498308557 1.770000e-15 95.3
21 TraesCS2A01G455700 chr3A 95.041 242 12 0 5219 5460 672844200 672843959 1.220000e-101 381.0
22 TraesCS2A01G455700 chr3A 92.245 245 19 0 5217 5461 224863020 224862776 1.230000e-91 348.0
23 TraesCS2A01G455700 chr3A 95.960 99 3 1 3850 3947 443203672 443203574 6.210000e-35 159.0
24 TraesCS2A01G455700 chr3A 93.137 102 6 1 3837 3937 333325163 333325264 1.340000e-31 148.0
25 TraesCS2A01G455700 chr1D 83.886 211 29 5 980 1188 476273327 476273534 4.730000e-46 196.0
26 TraesCS2A01G455700 chr1D 91.379 58 3 2 5671 5727 464799716 464799772 1.790000e-10 78.7
27 TraesCS2A01G455700 chr1D 100.000 31 0 0 1143 1173 359690585 359690615 2.330000e-04 58.4
28 TraesCS2A01G455700 chr1A 97.849 93 2 0 3843 3935 498400937 498400845 1.730000e-35 161.0
29 TraesCS2A01G455700 chr1A 91.892 74 6 0 1126 1199 577825643 577825570 2.950000e-18 104.0
30 TraesCS2A01G455700 chr1A 92.857 56 4 0 1124 1179 577758583 577758638 1.380000e-11 82.4
31 TraesCS2A01G455700 chr5B 93.137 102 5 2 3840 3939 674496523 674496624 1.340000e-31 148.0
32 TraesCS2A01G455700 chr3D 92.381 105 7 1 3837 3940 250919282 250919178 1.340000e-31 148.0
33 TraesCS2A01G455700 chr6A 92.308 104 6 2 3836 3938 125260106 125260004 4.830000e-31 147.0
34 TraesCS2A01G455700 chr5D 90.741 108 9 1 3831 3938 49290854 49290748 6.250000e-30 143.0
35 TraesCS2A01G455700 chr5D 91.803 61 3 2 5664 5724 482413630 482413572 3.840000e-12 84.2
36 TraesCS2A01G455700 chr5D 90.323 62 4 2 5681 5742 392072088 392072147 4.970000e-11 80.5
37 TraesCS2A01G455700 chr1B 79.891 184 25 8 1023 1203 662575617 662575791 2.260000e-24 124.0
38 TraesCS2A01G455700 chr4B 90.476 63 3 3 5665 5726 159603773 159603833 4.970000e-11 80.5
39 TraesCS2A01G455700 chr7D 90.164 61 4 2 5670 5729 22964353 22964294 1.790000e-10 78.7
40 TraesCS2A01G455700 chr7D 89.130 46 4 1 3574 3618 84802801 84802846 8.380000e-04 56.5
41 TraesCS2A01G455700 chr5A 90.000 60 5 1 5671 5730 547309101 547309043 6.430000e-10 76.8
42 TraesCS2A01G455700 chr7A 87.692 65 6 2 5678 5742 95881829 95881891 2.310000e-09 75.0
43 TraesCS2A01G455700 chr7A 88.889 45 4 1 3574 3617 85964536 85964580 3.000000e-03 54.7
44 TraesCS2A01G455700 chr7B 86.538 52 6 1 3574 3624 34497170 34497221 8.380000e-04 56.5
45 TraesCS2A01G455700 chr7B 89.130 46 4 1 3574 3618 34514890 34514935 8.380000e-04 56.5
46 TraesCS2A01G455700 chr7B 89.130 46 4 1 3574 3618 34516205 34516250 8.380000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G455700 chr2A 704757507 704763488 5981 True 3830.333333 11047 93.002000 1 5982 3 chr2A.!!$R2 5981
1 TraesCS2A01G455700 chr2D 564076679 564081889 5210 True 1295.833333 4043 92.209167 1 5934 6 chr2D.!!$R1 5933
2 TraesCS2A01G455700 chr2B 675336456 675342563 6107 True 904.444444 2490 91.780333 1 5934 9 chr2B.!!$R1 5933

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
974 1293 0.399075 ATGAACGACGGTCCCCTTTT 59.601 50.0 11.00 0.0 0.00 2.27 F
985 1304 0.902531 TCCCCTTTTCAGTAGGAGCG 59.097 55.0 0.00 0.0 34.56 5.03 F
2917 3458 1.162181 GCGATGCTCCAGCTATGCAA 61.162 55.0 10.69 0.0 42.66 4.08 F
3162 3703 0.330604 ACCTCCTATAGCCGCCGATA 59.669 55.0 0.00 0.0 0.00 2.92 F
4564 5122 0.379669 GCGTGCCTGAGAATGGAATG 59.620 55.0 0.00 0.0 0.00 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2262 2593 1.214175 TGGCCTCTTCACAGGTTTTGA 59.786 47.619 3.32 0.0 35.72 2.69 R
2975 3516 1.001378 GTTGTGACAGTGGGATGCAAC 60.001 52.381 0.00 0.0 0.00 4.17 R
4501 5059 0.104777 TCCTAGCTGGCCTGGATGAT 60.105 55.000 12.06 0.0 35.26 2.45 R
4636 5194 0.400213 TGTTCCCTTCATCGGTGCTT 59.600 50.000 0.00 0.0 0.00 3.91 R
5378 6007 0.108567 GGGCGTGTGTTTGGTTTTGT 60.109 50.000 0.00 0.0 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 114 1.524482 GGAGTGCTCAGGGATGGTC 59.476 63.158 1.41 0.00 0.00 4.02
109 116 2.187946 GTGCTCAGGGATGGTCGG 59.812 66.667 0.00 0.00 0.00 4.79
110 117 3.785859 TGCTCAGGGATGGTCGGC 61.786 66.667 0.00 0.00 0.00 5.54
111 118 3.785859 GCTCAGGGATGGTCGGCA 61.786 66.667 0.00 0.00 0.00 5.69
112 119 2.503061 CTCAGGGATGGTCGGCAG 59.497 66.667 0.00 0.00 0.00 4.85
113 120 3.746949 CTCAGGGATGGTCGGCAGC 62.747 68.421 0.00 0.00 0.00 5.25
114 121 4.100084 CAGGGATGGTCGGCAGCA 62.100 66.667 0.00 0.00 0.00 4.41
118 125 3.785859 GATGGTCGGCAGCAGGGA 61.786 66.667 0.00 0.00 32.21 4.20
119 126 3.746949 GATGGTCGGCAGCAGGGAG 62.747 68.421 0.00 0.00 32.21 4.30
201 481 4.256180 CCGGCCCTGTATGGAGCC 62.256 72.222 0.00 0.00 43.98 4.70
238 518 1.647346 GCATCGTGACCGTCCATAAA 58.353 50.000 0.00 0.00 35.01 1.40
240 520 2.030457 GCATCGTGACCGTCCATAAAAG 59.970 50.000 0.00 0.00 35.01 2.27
244 524 2.091588 CGTGACCGTCCATAAAAGAACG 59.908 50.000 0.00 0.00 35.01 3.95
251 531 2.418976 GTCCATAAAAGAACGGACAGCC 59.581 50.000 0.00 0.00 45.96 4.85
264 544 2.997315 CAGCCGAGGTCACCCAGA 60.997 66.667 0.00 0.00 0.00 3.86
276 556 4.052518 CCCAGAGGCCCAGGGTTG 62.053 72.222 15.06 0.94 37.81 3.77
277 557 3.260100 CCAGAGGCCCAGGGTTGT 61.260 66.667 7.55 0.00 0.00 3.32
278 558 2.352805 CAGAGGCCCAGGGTTGTC 59.647 66.667 7.55 1.33 0.00 3.18
279 559 2.208349 AGAGGCCCAGGGTTGTCT 59.792 61.111 7.55 3.90 0.00 3.41
280 560 1.464198 AGAGGCCCAGGGTTGTCTT 60.464 57.895 7.55 0.00 0.00 3.01
397 690 3.846430 GTCCCATCCCGTCCCGTC 61.846 72.222 0.00 0.00 0.00 4.79
473 791 3.744155 CCCCCTCCAAGCTTCCCC 61.744 72.222 0.00 0.00 0.00 4.81
475 793 4.803908 CCCTCCAAGCTTCCCCGC 62.804 72.222 0.00 0.00 0.00 6.13
490 808 1.916777 CCGCCCCGTATCCCCTTAT 60.917 63.158 0.00 0.00 0.00 1.73
569 887 3.804325 CCAAATCACGCGATTGTATCTCT 59.196 43.478 15.93 0.00 41.12 3.10
570 888 4.982295 CCAAATCACGCGATTGTATCTCTA 59.018 41.667 15.93 0.00 41.12 2.43
573 891 7.307396 CCAAATCACGCGATTGTATCTCTATTT 60.307 37.037 15.93 0.00 41.12 1.40
574 892 6.696825 ATCACGCGATTGTATCTCTATTTG 57.303 37.500 15.93 0.00 0.00 2.32
618 936 8.615211 CATTACATGGACGCTTATATGCATATT 58.385 33.333 23.71 6.04 0.00 1.28
624 942 5.391950 GGACGCTTATATGCATATTTGTGGG 60.392 44.000 23.71 18.82 0.00 4.61
633 951 1.401552 CATATTTGTGGGTGCAGACGG 59.598 52.381 0.00 0.00 0.00 4.79
643 961 2.093869 GGGTGCAGACGGTATTTAGTCA 60.094 50.000 0.00 0.00 39.67 3.41
646 964 5.353938 GGTGCAGACGGTATTTAGTCAATA 58.646 41.667 0.00 0.00 39.67 1.90
647 965 5.989777 GGTGCAGACGGTATTTAGTCAATAT 59.010 40.000 0.00 0.00 39.67 1.28
650 968 8.062448 GTGCAGACGGTATTTAGTCAATATTTC 58.938 37.037 0.00 0.00 39.67 2.17
689 1007 2.896685 GTTCCCCATCCACACATTTTCA 59.103 45.455 0.00 0.00 0.00 2.69
732 1050 4.985044 AGACAAATACTGCGTTGTGTAC 57.015 40.909 0.00 0.00 38.07 2.90
740 1058 3.773630 CGTTGTGTACGCAGGCGG 61.774 66.667 18.63 0.14 44.26 6.13
784 1102 3.366374 GGTGCAGGCAGACAGTTAATTTC 60.366 47.826 0.00 0.00 0.00 2.17
822 1140 3.069443 ACGCCTGAACAATCAAAACCATT 59.931 39.130 0.00 0.00 34.49 3.16
861 1179 5.837586 TCTTGCGTAATTTTGGAAATTGC 57.162 34.783 8.48 6.54 0.00 3.56
862 1180 5.537188 TCTTGCGTAATTTTGGAAATTGCT 58.463 33.333 8.48 0.00 0.00 3.91
863 1181 5.404968 TCTTGCGTAATTTTGGAAATTGCTG 59.595 36.000 8.48 5.71 0.00 4.41
864 1182 4.626042 TGCGTAATTTTGGAAATTGCTGT 58.374 34.783 8.48 0.00 0.00 4.40
865 1183 5.053145 TGCGTAATTTTGGAAATTGCTGTT 58.947 33.333 8.48 0.00 0.00 3.16
866 1184 5.176590 TGCGTAATTTTGGAAATTGCTGTTC 59.823 36.000 8.48 0.00 0.00 3.18
867 1185 5.389411 GCGTAATTTTGGAAATTGCTGTTCC 60.389 40.000 8.48 6.67 44.19 3.62
883 1201 5.471797 TGCTGTTCCGAAGTTTCATTATTCA 59.528 36.000 0.00 0.00 0.00 2.57
891 1209 7.390440 TCCGAAGTTTCATTATTCAGTGAATGT 59.610 33.333 25.48 12.92 34.60 2.71
893 1211 8.017373 CGAAGTTTCATTATTCAGTGAATGTGT 58.983 33.333 25.48 10.34 34.60 3.72
894 1212 9.121517 GAAGTTTCATTATTCAGTGAATGTGTG 57.878 33.333 25.48 19.60 34.60 3.82
910 1228 2.434336 TGTGTGGTTAGTCTTGCAGTCT 59.566 45.455 0.00 0.00 0.00 3.24
911 1229 3.118408 TGTGTGGTTAGTCTTGCAGTCTT 60.118 43.478 0.00 0.00 0.00 3.01
912 1230 3.495001 GTGTGGTTAGTCTTGCAGTCTTC 59.505 47.826 0.00 0.00 0.00 2.87
963 1282 6.700081 TGCAATGGTAGTCTTATATGAACGAC 59.300 38.462 0.00 0.00 0.00 4.34
967 1286 5.008019 TGGTAGTCTTATATGAACGACGGTC 59.992 44.000 5.79 5.79 0.00 4.79
974 1293 0.399075 ATGAACGACGGTCCCCTTTT 59.601 50.000 11.00 0.00 0.00 2.27
985 1304 0.902531 TCCCCTTTTCAGTAGGAGCG 59.097 55.000 0.00 0.00 34.56 5.03
1037 1356 2.586357 GTCATCCTCTTCGGGCGC 60.586 66.667 0.00 0.00 0.00 6.53
1078 1397 3.019003 GCTCTTCAGCCGGCCTACA 62.019 63.158 26.15 3.57 40.14 2.74
1086 1405 2.125673 CCGGCCTACACTCCAACG 60.126 66.667 0.00 0.00 0.00 4.10
1088 1407 2.436115 GGCCTACACTCCAACGGC 60.436 66.667 0.00 0.00 39.98 5.68
1125 1444 4.058124 GTTTCATTGTTTCCCCTTTGCTC 58.942 43.478 0.00 0.00 0.00 4.26
1138 1457 4.113354 CCCTTTGCTCGTAGATGTAGTTC 58.887 47.826 0.00 0.00 33.89 3.01
1173 1492 7.149307 GCTTAGTGAGTACTAGGATTGGATTC 58.851 42.308 0.00 0.00 40.33 2.52
1178 1497 7.070074 AGTGAGTACTAGGATTGGATTCGATTT 59.930 37.037 0.00 0.00 34.74 2.17
1382 1711 7.148255 TGCAATGGTAGTCTTATGTGAACAATC 60.148 37.037 0.00 0.00 0.00 2.67
1391 1720 3.928727 ATGTGAACAATCTGTGCAAGG 57.071 42.857 0.00 0.00 37.73 3.61
1398 1727 3.759581 ACAATCTGTGCAAGGTCTCATT 58.240 40.909 0.00 0.00 0.00 2.57
1456 1785 4.703575 AGTGCTTGATGTATTGCATGTCTT 59.296 37.500 0.00 0.00 38.06 3.01
1485 1814 2.671396 GCCGTACATTTCTCACATTCGT 59.329 45.455 0.00 0.00 0.00 3.85
1486 1815 3.483574 GCCGTACATTTCTCACATTCGTG 60.484 47.826 0.00 0.00 45.08 4.35
1532 1861 7.643569 TGCCAGATTCTTGCTTTATTAATCA 57.356 32.000 10.71 0.00 0.00 2.57
1534 1863 7.557358 TGCCAGATTCTTGCTTTATTAATCAGA 59.443 33.333 10.71 0.00 0.00 3.27
1923 2252 2.676342 GTTAAGGTAGGATTGCACCGTG 59.324 50.000 0.00 0.00 39.94 4.94
2062 2393 2.840038 TGAGATGGCTACAATCTGTGGT 59.160 45.455 0.00 0.00 30.95 4.16
2262 2593 6.149129 TGCTATAGTTGTGATCGAGAATGT 57.851 37.500 0.84 0.00 0.00 2.71
2307 2638 8.773645 CACACAATCTTTTACTAACACTGATGA 58.226 33.333 0.00 0.00 0.00 2.92
2452 2978 7.923414 AGGTTATTCAACAAATGGAGTAGTC 57.077 36.000 0.00 0.00 36.29 2.59
2483 3009 7.411274 TGAAATGTGGTAGTTACAAACTTTCG 58.589 34.615 0.00 0.00 42.81 3.46
2917 3458 1.162181 GCGATGCTCCAGCTATGCAA 61.162 55.000 10.69 0.00 42.66 4.08
2975 3516 1.334869 GTGCTTTCACCACACAAGGAG 59.665 52.381 0.00 0.00 37.24 3.69
2981 3522 1.133823 TCACCACACAAGGAGTTGCAT 60.134 47.619 0.00 0.00 37.14 3.96
3016 3557 7.543172 CACAACAAAATAAGTAGAATGCATGCT 59.457 33.333 20.33 13.03 0.00 3.79
3104 3645 1.118838 CTAGAGCCAGAGGTCCTTGG 58.881 60.000 13.11 13.11 41.64 3.61
3115 3656 1.145738 AGGTCCTTGGCATTGACTGTT 59.854 47.619 14.22 1.90 0.00 3.16
3162 3703 0.330604 ACCTCCTATAGCCGCCGATA 59.669 55.000 0.00 0.00 0.00 2.92
3164 3705 1.609555 CCTCCTATAGCCGCCGATATC 59.390 57.143 0.00 0.00 0.00 1.63
3291 3832 1.777272 AGGAAGGAAAGAGCCACTGTT 59.223 47.619 0.00 0.00 0.00 3.16
3376 3924 6.947733 ACCAAGTCATGATGAAAACTCCATAA 59.052 34.615 0.00 0.00 0.00 1.90
3458 4006 9.730420 GTTCTACACATGTAAAATGTCAAGTTT 57.270 29.630 0.00 0.00 0.00 2.66
3466 4014 8.745837 CATGTAAAATGTCAAGTTTGAACTCAC 58.254 33.333 0.00 0.00 38.57 3.51
3556 4107 5.419788 TCATTGCTGAATTTGCTCATACCTT 59.580 36.000 6.07 0.00 0.00 3.50
3561 4112 5.803967 GCTGAATTTGCTCATACCTTTCAAG 59.196 40.000 0.00 0.00 0.00 3.02
3566 4117 5.689383 TTGCTCATACCTTTCAAGTGAAC 57.311 39.130 0.00 0.00 33.13 3.18
3591 4142 8.603181 ACTTGACTTGAAATTTTACATGTTTGC 58.397 29.630 2.30 0.00 0.00 3.68
3625 4181 5.515886 CCTCCCCAACATACTGTTTCCTTTA 60.516 44.000 0.00 0.00 38.77 1.85
3626 4182 5.954757 TCCCCAACATACTGTTTCCTTTAA 58.045 37.500 0.00 0.00 38.77 1.52
3627 4183 5.771165 TCCCCAACATACTGTTTCCTTTAAC 59.229 40.000 0.00 0.00 38.77 2.01
3630 4186 6.264518 CCCAACATACTGTTTCCTTTAACACT 59.735 38.462 0.00 0.00 38.77 3.55
3644 4200 7.291566 TCCTTTAACACTGGACATTTTTCCTA 58.708 34.615 0.00 0.00 36.51 2.94
3686 4242 6.015918 AGGGAGGAAGTACATGATCATAGAG 58.984 44.000 8.15 0.00 0.00 2.43
3727 4283 3.094484 TCCCTTGCCAAAATATCGGTT 57.906 42.857 0.00 0.00 0.00 4.44
3728 4284 2.757868 TCCCTTGCCAAAATATCGGTTG 59.242 45.455 0.00 0.00 0.00 3.77
3729 4285 2.757868 CCCTTGCCAAAATATCGGTTGA 59.242 45.455 0.00 0.00 0.00 3.18
3730 4286 3.428862 CCCTTGCCAAAATATCGGTTGAC 60.429 47.826 0.00 0.00 0.00 3.18
3853 4411 9.646427 TGGTTGGCAAATTATTGTTTATTACTC 57.354 29.630 0.00 0.00 38.85 2.59
3854 4412 9.093970 GGTTGGCAAATTATTGTTTATTACTCC 57.906 33.333 0.00 0.00 38.85 3.85
3855 4413 9.093970 GTTGGCAAATTATTGTTTATTACTCCC 57.906 33.333 0.00 0.00 38.85 4.30
3856 4414 8.602472 TGGCAAATTATTGTTTATTACTCCCT 57.398 30.769 0.00 0.00 38.85 4.20
3857 4415 8.691797 TGGCAAATTATTGTTTATTACTCCCTC 58.308 33.333 0.00 0.00 38.85 4.30
3858 4416 8.141909 GGCAAATTATTGTTTATTACTCCCTCC 58.858 37.037 0.00 0.00 38.85 4.30
3859 4417 7.860872 GCAAATTATTGTTTATTACTCCCTCCG 59.139 37.037 0.00 0.00 38.85 4.63
3860 4418 8.899771 CAAATTATTGTTTATTACTCCCTCCGT 58.100 33.333 0.00 0.00 0.00 4.69
3864 4422 7.854557 ATTGTTTATTACTCCCTCCGTAAAC 57.145 36.000 0.00 0.00 34.38 2.01
3865 4423 6.610075 TGTTTATTACTCCCTCCGTAAACT 57.390 37.500 0.00 0.00 34.70 2.66
3866 4424 7.716799 TGTTTATTACTCCCTCCGTAAACTA 57.283 36.000 0.00 0.00 34.70 2.24
3867 4425 8.133024 TGTTTATTACTCCCTCCGTAAACTAA 57.867 34.615 0.00 0.00 34.70 2.24
3868 4426 8.761689 TGTTTATTACTCCCTCCGTAAACTAAT 58.238 33.333 0.00 0.00 34.70 1.73
3874 4432 9.866655 TTACTCCCTCCGTAAACTAATATAAGA 57.133 33.333 0.00 0.00 0.00 2.10
3875 4433 8.773033 ACTCCCTCCGTAAACTAATATAAGAA 57.227 34.615 0.00 0.00 0.00 2.52
3876 4434 9.377238 ACTCCCTCCGTAAACTAATATAAGAAT 57.623 33.333 0.00 0.00 0.00 2.40
3877 4435 9.640963 CTCCCTCCGTAAACTAATATAAGAATG 57.359 37.037 0.00 0.00 0.00 2.67
3878 4436 9.151177 TCCCTCCGTAAACTAATATAAGAATGT 57.849 33.333 0.00 0.00 0.00 2.71
3879 4437 9.774413 CCCTCCGTAAACTAATATAAGAATGTT 57.226 33.333 0.00 0.00 0.00 2.71
3930 4488 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20
3932 4490 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
3988 4546 8.573035 TGTTGTTAATTTGTAGGGAATGAACTC 58.427 33.333 0.00 0.00 31.74 3.01
4010 4568 2.287188 GGAACAGCATGCGGATAACATG 60.287 50.000 24.99 11.15 46.19 3.21
4097 4655 4.021016 CAGTTCTTGACTAACCTAGTGGCT 60.021 45.833 0.00 0.00 39.59 4.75
4098 4656 4.021016 AGTTCTTGACTAACCTAGTGGCTG 60.021 45.833 0.00 0.00 39.59 4.85
4184 4742 4.072131 GTGAGCATTTCAGGGTTCAAGTA 58.928 43.478 0.00 0.00 36.21 2.24
4266 4824 5.865085 ACATACTCAAGAGTTTAAGTGGCA 58.135 37.500 8.17 0.00 42.54 4.92
4280 4838 0.895100 GTGGCACTCTTTGGGATGCA 60.895 55.000 11.13 0.00 39.92 3.96
4319 4877 5.408204 TGCTTAATCATGAGCATTACACG 57.592 39.130 0.09 0.00 42.61 4.49
4501 5059 1.702182 TCTTTGTCAAAGGCATGGCA 58.298 45.000 22.64 0.00 39.01 4.92
4564 5122 0.379669 GCGTGCCTGAGAATGGAATG 59.620 55.000 0.00 0.00 0.00 2.67
4577 5135 7.965718 TGAGAATGGAATGGAAAATGAAAACT 58.034 30.769 0.00 0.00 0.00 2.66
4606 5164 4.145052 GGGTGAATGCCCTTATTCCTAAG 58.855 47.826 0.00 0.00 45.22 2.18
4636 5194 1.810151 GAGGCCGCAATGTCTTTTACA 59.190 47.619 0.00 0.00 43.86 2.41
4771 5329 1.066422 CGATCGCCTAGCAGAAGCA 59.934 57.895 0.26 0.00 45.49 3.91
4822 5380 4.016706 CCCGACGACCTTTGGGCT 62.017 66.667 0.00 0.00 33.03 5.19
4924 5482 1.279271 AGGGCATTCGACAAGCTTAGT 59.721 47.619 0.00 0.00 0.00 2.24
5079 5708 1.201965 GCGGCTGATCTTTATATGCGC 60.202 52.381 0.00 0.00 0.00 6.09
5194 5823 1.755395 GCAGGCATGGCAGGATGAA 60.755 57.895 22.64 0.00 39.69 2.57
5209 5838 1.203287 GATGAACCAGGAAGGCAAAGC 59.797 52.381 0.00 0.00 43.14 3.51
5214 5843 2.049372 ACCAGGAAGGCAAAGCAATTT 58.951 42.857 0.00 0.00 43.14 1.82
5215 5844 2.439135 ACCAGGAAGGCAAAGCAATTTT 59.561 40.909 0.00 0.00 43.14 1.82
5217 5846 2.809696 CAGGAAGGCAAAGCAATTTTGG 59.190 45.455 2.28 0.00 45.09 3.28
5218 5847 2.153645 GGAAGGCAAAGCAATTTTGGG 58.846 47.619 2.28 0.00 45.09 4.12
5219 5848 1.536766 GAAGGCAAAGCAATTTTGGGC 59.463 47.619 2.28 0.00 45.09 5.36
5220 5849 0.250858 AGGCAAAGCAATTTTGGGCC 60.251 50.000 0.00 0.00 45.09 5.80
5221 5850 0.250858 GGCAAAGCAATTTTGGGCCT 60.251 50.000 4.53 0.00 45.09 5.19
5222 5851 0.876399 GCAAAGCAATTTTGGGCCTG 59.124 50.000 4.53 0.00 45.09 4.85
5223 5852 1.815021 GCAAAGCAATTTTGGGCCTGT 60.815 47.619 4.53 0.00 45.09 4.00
5224 5853 2.574450 CAAAGCAATTTTGGGCCTGTT 58.426 42.857 4.53 0.00 41.99 3.16
5225 5854 2.950975 CAAAGCAATTTTGGGCCTGTTT 59.049 40.909 4.53 0.00 41.99 2.83
5226 5855 2.259266 AGCAATTTTGGGCCTGTTTG 57.741 45.000 4.53 4.95 0.00 2.93
5227 5856 1.202794 AGCAATTTTGGGCCTGTTTGG 60.203 47.619 4.53 0.00 39.35 3.28
5228 5857 1.476652 GCAATTTTGGGCCTGTTTGGT 60.477 47.619 4.53 0.00 38.35 3.67
5229 5858 2.929641 CAATTTTGGGCCTGTTTGGTT 58.070 42.857 4.53 0.00 38.35 3.67
5230 5859 3.286353 CAATTTTGGGCCTGTTTGGTTT 58.714 40.909 4.53 0.00 38.35 3.27
5231 5860 2.409948 TTTTGGGCCTGTTTGGTTTG 57.590 45.000 4.53 0.00 38.35 2.93
5232 5861 0.543749 TTTGGGCCTGTTTGGTTTGG 59.456 50.000 4.53 0.00 38.35 3.28
5233 5862 1.341156 TTGGGCCTGTTTGGTTTGGG 61.341 55.000 4.53 0.00 38.35 4.12
5234 5863 1.458588 GGGCCTGTTTGGTTTGGGA 60.459 57.895 0.84 0.00 38.35 4.37
5235 5864 1.745890 GGCCTGTTTGGTTTGGGAC 59.254 57.895 0.00 0.00 38.35 4.46
5236 5865 0.759060 GGCCTGTTTGGTTTGGGACT 60.759 55.000 0.00 0.00 38.35 3.85
5237 5866 1.119684 GCCTGTTTGGTTTGGGACTT 58.880 50.000 0.00 0.00 38.35 3.01
5238 5867 2.312390 GCCTGTTTGGTTTGGGACTTA 58.688 47.619 0.00 0.00 38.35 2.24
5239 5868 2.696187 GCCTGTTTGGTTTGGGACTTAA 59.304 45.455 0.00 0.00 38.35 1.85
5240 5869 3.323691 GCCTGTTTGGTTTGGGACTTAAT 59.676 43.478 0.00 0.00 38.35 1.40
5241 5870 4.202315 GCCTGTTTGGTTTGGGACTTAATT 60.202 41.667 0.00 0.00 38.35 1.40
5242 5871 5.686387 GCCTGTTTGGTTTGGGACTTAATTT 60.686 40.000 0.00 0.00 38.35 1.82
5243 5872 5.757808 CCTGTTTGGTTTGGGACTTAATTTG 59.242 40.000 0.00 0.00 0.00 2.32
5244 5873 5.119694 TGTTTGGTTTGGGACTTAATTTGC 58.880 37.500 0.00 0.00 0.00 3.68
5245 5874 4.344359 TTGGTTTGGGACTTAATTTGCC 57.656 40.909 0.00 0.00 0.00 4.52
5246 5875 3.309296 TGGTTTGGGACTTAATTTGCCA 58.691 40.909 0.00 0.00 31.60 4.92
5247 5876 3.906846 TGGTTTGGGACTTAATTTGCCAT 59.093 39.130 0.00 0.00 33.95 4.40
5248 5877 4.252878 GGTTTGGGACTTAATTTGCCATG 58.747 43.478 0.00 0.00 33.95 3.66
5249 5878 4.020662 GGTTTGGGACTTAATTTGCCATGA 60.021 41.667 0.00 0.00 33.95 3.07
5250 5879 4.799564 TTGGGACTTAATTTGCCATGAC 57.200 40.909 0.00 0.00 33.95 3.06
5251 5880 4.046286 TGGGACTTAATTTGCCATGACT 57.954 40.909 0.00 0.00 27.75 3.41
5252 5881 5.186256 TGGGACTTAATTTGCCATGACTA 57.814 39.130 0.00 0.00 27.75 2.59
5253 5882 5.575157 TGGGACTTAATTTGCCATGACTAA 58.425 37.500 0.00 0.00 27.75 2.24
5254 5883 5.652014 TGGGACTTAATTTGCCATGACTAAG 59.348 40.000 0.00 0.00 27.75 2.18
5255 5884 5.067805 GGGACTTAATTTGCCATGACTAAGG 59.932 44.000 0.00 0.00 0.00 2.69
5256 5885 5.652452 GGACTTAATTTGCCATGACTAAGGT 59.348 40.000 0.00 0.00 0.00 3.50
5257 5886 6.152831 GGACTTAATTTGCCATGACTAAGGTT 59.847 38.462 0.00 0.00 0.00 3.50
5258 5887 7.338449 GGACTTAATTTGCCATGACTAAGGTTA 59.662 37.037 0.00 0.00 0.00 2.85
5259 5888 8.281212 ACTTAATTTGCCATGACTAAGGTTAG 57.719 34.615 0.00 0.00 36.82 2.34
5260 5889 7.339466 ACTTAATTTGCCATGACTAAGGTTAGG 59.661 37.037 0.00 0.00 35.08 2.69
5261 5890 2.710096 TGCCATGACTAAGGTTAGGC 57.290 50.000 0.00 0.00 39.31 3.93
5262 5891 1.134521 TGCCATGACTAAGGTTAGGCG 60.135 52.381 0.00 0.00 41.83 5.52
5263 5892 1.134491 GCCATGACTAAGGTTAGGCGT 60.134 52.381 0.00 0.00 41.83 5.68
5264 5893 2.679930 GCCATGACTAAGGTTAGGCGTT 60.680 50.000 0.00 0.00 41.83 4.84
5265 5894 2.936498 CCATGACTAAGGTTAGGCGTTG 59.064 50.000 0.00 0.00 41.83 4.10
5266 5895 2.754946 TGACTAAGGTTAGGCGTTGG 57.245 50.000 1.94 0.00 41.83 3.77
5267 5896 1.338389 TGACTAAGGTTAGGCGTTGGC 60.338 52.381 1.94 0.00 41.83 4.52
5296 5925 4.724697 CGCGCCGCAGAAACTGTG 62.725 66.667 10.75 5.48 41.13 3.66
5302 5931 4.922791 GCAGAAACTGTGGCGAAC 57.077 55.556 0.00 0.00 33.43 3.95
5303 5932 2.021722 GCAGAAACTGTGGCGAACA 58.978 52.632 0.00 0.00 37.22 3.18
5304 5933 0.380378 GCAGAAACTGTGGCGAACAA 59.620 50.000 0.00 0.00 38.67 2.83
5305 5934 1.202245 GCAGAAACTGTGGCGAACAAA 60.202 47.619 0.00 0.00 38.67 2.83
5306 5935 2.733858 GCAGAAACTGTGGCGAACAAAA 60.734 45.455 0.00 0.00 38.67 2.44
5307 5936 2.851824 CAGAAACTGTGGCGAACAAAAC 59.148 45.455 0.00 0.00 38.67 2.43
5308 5937 1.843753 GAAACTGTGGCGAACAAAACG 59.156 47.619 0.00 0.00 38.67 3.60
5309 5938 1.088306 AACTGTGGCGAACAAAACGA 58.912 45.000 0.00 0.00 38.67 3.85
5310 5939 0.655733 ACTGTGGCGAACAAAACGAG 59.344 50.000 0.00 0.00 38.67 4.18
5311 5940 0.657368 CTGTGGCGAACAAAACGAGC 60.657 55.000 0.00 0.00 38.67 5.03
5312 5941 1.721133 GTGGCGAACAAAACGAGCG 60.721 57.895 0.00 0.00 0.00 5.03
5313 5942 2.795389 GGCGAACAAAACGAGCGC 60.795 61.111 0.00 0.00 46.20 5.92
5314 5943 2.795389 GCGAACAAAACGAGCGCC 60.795 61.111 2.29 0.00 41.65 6.53
5315 5944 2.496794 CGAACAAAACGAGCGCCG 60.497 61.111 15.25 15.25 45.44 6.46
5316 5945 2.795389 GAACAAAACGAGCGCCGC 60.795 61.111 16.48 0.00 43.32 6.53
5317 5946 3.515286 GAACAAAACGAGCGCCGCA 62.515 57.895 13.36 0.00 43.32 5.69
5318 5947 3.800323 AACAAAACGAGCGCCGCAC 62.800 57.895 13.36 3.45 43.32 5.34
5322 5951 3.869473 AAACGAGCGCCGCACCTTA 62.869 57.895 13.36 0.00 43.32 2.69
5323 5952 4.796231 ACGAGCGCCGCACCTTAG 62.796 66.667 13.36 0.00 43.32 2.18
5357 5986 3.393089 CTGCAGAAGCCCGTATAGATT 57.607 47.619 8.42 0.00 41.13 2.40
5358 5987 3.062763 CTGCAGAAGCCCGTATAGATTG 58.937 50.000 8.42 0.00 41.13 2.67
5359 5988 2.434336 TGCAGAAGCCCGTATAGATTGT 59.566 45.455 0.00 0.00 41.13 2.71
5360 5989 2.802816 GCAGAAGCCCGTATAGATTGTG 59.197 50.000 0.00 0.00 33.58 3.33
5361 5990 3.393800 CAGAAGCCCGTATAGATTGTGG 58.606 50.000 0.00 0.00 0.00 4.17
5362 5991 2.143925 GAAGCCCGTATAGATTGTGGC 58.856 52.381 0.00 0.00 39.17 5.01
5363 5992 1.128200 AGCCCGTATAGATTGTGGCA 58.872 50.000 0.00 0.00 41.33 4.92
5364 5993 1.488812 AGCCCGTATAGATTGTGGCAA 59.511 47.619 0.00 0.00 41.33 4.52
5365 5994 1.873591 GCCCGTATAGATTGTGGCAAG 59.126 52.381 0.00 0.00 38.73 4.01
5366 5995 1.873591 CCCGTATAGATTGTGGCAAGC 59.126 52.381 0.00 0.00 0.00 4.01
5367 5996 1.873591 CCGTATAGATTGTGGCAAGCC 59.126 52.381 3.61 3.61 0.00 4.35
5368 5997 2.560504 CGTATAGATTGTGGCAAGCCA 58.439 47.619 10.24 10.24 45.02 4.75
5376 6005 3.431055 TGGCAAGCCAAACGTCAG 58.569 55.556 12.11 0.00 44.12 3.51
5377 6006 1.453015 TGGCAAGCCAAACGTCAGT 60.453 52.632 12.11 0.00 44.12 3.41
5378 6007 0.179043 TGGCAAGCCAAACGTCAGTA 60.179 50.000 12.11 0.00 44.12 2.74
5379 6008 0.237498 GGCAAGCCAAACGTCAGTAC 59.763 55.000 6.14 0.00 35.81 2.73
5380 6009 0.941542 GCAAGCCAAACGTCAGTACA 59.058 50.000 0.00 0.00 0.00 2.90
5381 6010 1.332375 GCAAGCCAAACGTCAGTACAA 59.668 47.619 0.00 0.00 0.00 2.41
5382 6011 2.223386 GCAAGCCAAACGTCAGTACAAA 60.223 45.455 0.00 0.00 0.00 2.83
5383 6012 3.732471 GCAAGCCAAACGTCAGTACAAAA 60.732 43.478 0.00 0.00 0.00 2.44
5384 6013 3.685836 AGCCAAACGTCAGTACAAAAC 57.314 42.857 0.00 0.00 0.00 2.43
5385 6014 2.356695 AGCCAAACGTCAGTACAAAACC 59.643 45.455 0.00 0.00 0.00 3.27
5386 6015 2.097791 GCCAAACGTCAGTACAAAACCA 59.902 45.455 0.00 0.00 0.00 3.67
5387 6016 3.427773 GCCAAACGTCAGTACAAAACCAA 60.428 43.478 0.00 0.00 0.00 3.67
5388 6017 4.734917 CCAAACGTCAGTACAAAACCAAA 58.265 39.130 0.00 0.00 0.00 3.28
5389 6018 4.559643 CCAAACGTCAGTACAAAACCAAAC 59.440 41.667 0.00 0.00 0.00 2.93
5390 6019 5.154932 CAAACGTCAGTACAAAACCAAACA 58.845 37.500 0.00 0.00 0.00 2.83
5391 6020 4.345271 ACGTCAGTACAAAACCAAACAC 57.655 40.909 0.00 0.00 0.00 3.32
5392 6021 3.752222 ACGTCAGTACAAAACCAAACACA 59.248 39.130 0.00 0.00 0.00 3.72
5393 6022 4.092816 CGTCAGTACAAAACCAAACACAC 58.907 43.478 0.00 0.00 0.00 3.82
5394 6023 4.092816 GTCAGTACAAAACCAAACACACG 58.907 43.478 0.00 0.00 0.00 4.49
5395 6024 2.849473 CAGTACAAAACCAAACACACGC 59.151 45.455 0.00 0.00 0.00 5.34
5396 6025 2.159352 AGTACAAAACCAAACACACGCC 60.159 45.455 0.00 0.00 0.00 5.68
5397 6026 0.108567 ACAAAACCAAACACACGCCC 60.109 50.000 0.00 0.00 0.00 6.13
5398 6027 0.108615 CAAAACCAAACACACGCCCA 60.109 50.000 0.00 0.00 0.00 5.36
5399 6028 0.174617 AAAACCAAACACACGCCCAG 59.825 50.000 0.00 0.00 0.00 4.45
5400 6029 1.671901 AAACCAAACACACGCCCAGG 61.672 55.000 0.00 0.00 0.00 4.45
5401 6030 2.203280 CCAAACACACGCCCAGGA 60.203 61.111 0.00 0.00 0.00 3.86
5402 6031 2.260869 CCAAACACACGCCCAGGAG 61.261 63.158 0.00 0.00 0.00 3.69
5403 6032 2.113139 AAACACACGCCCAGGAGG 59.887 61.111 0.00 0.00 39.47 4.30
5404 6033 2.752807 AAACACACGCCCAGGAGGT 61.753 57.895 0.00 0.00 38.26 3.85
5405 6034 2.279037 AAACACACGCCCAGGAGGTT 62.279 55.000 0.00 0.00 38.26 3.50
5406 6035 2.669569 CACACGCCCAGGAGGTTG 60.670 66.667 0.00 0.00 38.26 3.77
5407 6036 3.953775 ACACGCCCAGGAGGTTGG 61.954 66.667 0.00 0.00 38.26 3.77
5413 6042 2.982130 CCAGGAGGTTGGGACTCG 59.018 66.667 0.00 0.00 35.82 4.18
5414 6043 2.266055 CAGGAGGTTGGGACTCGC 59.734 66.667 0.00 0.00 35.82 5.03
5415 6044 3.003763 AGGAGGTTGGGACTCGCC 61.004 66.667 0.00 0.00 35.82 5.54
5416 6045 3.319198 GGAGGTTGGGACTCGCCA 61.319 66.667 0.00 0.00 38.95 5.69
5417 6046 2.047179 GAGGTTGGGACTCGCCAC 60.047 66.667 0.00 0.00 38.95 5.01
5418 6047 2.847234 AGGTTGGGACTCGCCACA 60.847 61.111 0.54 0.00 38.95 4.17
5419 6048 2.668550 GGTTGGGACTCGCCACAC 60.669 66.667 0.54 0.00 38.95 3.82
5420 6049 3.041940 GTTGGGACTCGCCACACG 61.042 66.667 0.00 0.00 45.62 4.49
5421 6050 3.542676 TTGGGACTCGCCACACGT 61.543 61.111 0.00 0.00 44.19 4.49
5422 6051 3.096633 TTGGGACTCGCCACACGTT 62.097 57.895 0.00 0.00 44.19 3.99
5423 6052 2.280592 GGGACTCGCCACACGTTT 60.281 61.111 0.00 0.00 44.19 3.60
5424 6053 2.604174 GGGACTCGCCACACGTTTG 61.604 63.158 0.00 0.00 44.19 2.93
5425 6054 2.604174 GGACTCGCCACACGTTTGG 61.604 63.158 16.58 16.58 44.19 3.28
5436 6065 4.973360 CGTTTGGCGTGGCAACCG 62.973 66.667 11.26 11.26 35.54 4.44
5437 6066 3.587933 GTTTGGCGTGGCAACCGA 61.588 61.111 8.49 0.00 32.87 4.69
5438 6067 2.596046 TTTGGCGTGGCAACCGAT 60.596 55.556 8.49 0.00 32.87 4.18
5439 6068 2.913765 TTTGGCGTGGCAACCGATG 61.914 57.895 8.49 0.00 32.87 3.84
5476 6105 6.681777 ACAGCCTCTTTATGTTTGATGTTTC 58.318 36.000 0.00 0.00 0.00 2.78
5544 6173 2.472909 GGGACGCTTGCTGGTATGC 61.473 63.158 0.00 0.00 0.00 3.14
5596 6225 7.148340 TGTGATGATGTAATGCAATTTCGTACA 60.148 33.333 0.00 0.00 37.87 2.90
5622 6251 6.017933 CAGTTTTGCACTCAGAATTCGATAC 58.982 40.000 0.00 0.00 30.92 2.24
5625 6254 4.456280 TGCACTCAGAATTCGATACAGT 57.544 40.909 0.00 0.00 0.00 3.55
5631 6260 7.421599 CACTCAGAATTCGATACAGTACAGAT 58.578 38.462 0.00 0.00 0.00 2.90
5657 6286 8.045176 ACACATATTTTAAGCAAGGAGAGTTC 57.955 34.615 0.00 0.00 0.00 3.01
5676 6305 3.308438 TCGACCTTGTAGGCACTAAAC 57.692 47.619 0.00 0.00 45.48 2.01
5708 6338 5.453903 CCCTCCATCCCATAATATAAGAGCG 60.454 48.000 0.00 0.00 0.00 5.03
5714 6344 8.023128 CCATCCCATAATATAAGAGCGTTTTTG 58.977 37.037 0.00 0.00 0.00 2.44
5718 6348 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
5719 6349 7.855904 CCATAATATAAGAGCGTTTTTGACACC 59.144 37.037 0.00 0.00 0.00 4.16
5721 6351 2.844122 AAGAGCGTTTTTGACACCAC 57.156 45.000 0.00 0.00 0.00 4.16
5728 6404 3.181504 GCGTTTTTGACACCACTACTTGT 60.182 43.478 0.00 0.00 0.00 3.16
5849 6558 3.136077 AGATGCAGCTGGTGATGTCTTAT 59.864 43.478 17.12 0.00 31.27 1.73
5940 6649 0.743097 GTACCTGCCAGTACCCTACG 59.257 60.000 2.68 0.00 37.27 3.51
5941 6650 0.625316 TACCTGCCAGTACCCTACGA 59.375 55.000 0.00 0.00 0.00 3.43
5942 6651 0.683504 ACCTGCCAGTACCCTACGAG 60.684 60.000 0.00 0.00 0.00 4.18
5943 6652 0.395311 CCTGCCAGTACCCTACGAGA 60.395 60.000 0.00 0.00 0.00 4.04
5944 6653 1.471119 CTGCCAGTACCCTACGAGAA 58.529 55.000 0.00 0.00 0.00 2.87
5945 6654 1.822990 CTGCCAGTACCCTACGAGAAA 59.177 52.381 0.00 0.00 0.00 2.52
5946 6655 2.431057 CTGCCAGTACCCTACGAGAAAT 59.569 50.000 0.00 0.00 0.00 2.17
5947 6656 2.167693 TGCCAGTACCCTACGAGAAATG 59.832 50.000 0.00 0.00 0.00 2.32
5948 6657 2.167900 GCCAGTACCCTACGAGAAATGT 59.832 50.000 0.00 0.00 0.00 2.71
5949 6658 3.782046 CCAGTACCCTACGAGAAATGTG 58.218 50.000 0.00 0.00 0.00 3.21
5950 6659 3.430374 CCAGTACCCTACGAGAAATGTGG 60.430 52.174 0.00 0.00 0.00 4.17
5951 6660 2.764572 AGTACCCTACGAGAAATGTGGG 59.235 50.000 0.00 0.00 40.37 4.61
5952 6661 0.252197 ACCCTACGAGAAATGTGGGC 59.748 55.000 0.00 0.00 36.71 5.36
5953 6662 0.541863 CCCTACGAGAAATGTGGGCT 59.458 55.000 0.00 0.00 36.71 5.19
5954 6663 1.656652 CCTACGAGAAATGTGGGCTG 58.343 55.000 0.00 0.00 30.88 4.85
5955 6664 1.066143 CCTACGAGAAATGTGGGCTGT 60.066 52.381 0.00 0.00 30.88 4.40
5956 6665 2.615493 CCTACGAGAAATGTGGGCTGTT 60.615 50.000 0.00 0.00 30.88 3.16
5957 6666 1.523758 ACGAGAAATGTGGGCTGTTC 58.476 50.000 0.00 0.00 0.00 3.18
5958 6667 1.202758 ACGAGAAATGTGGGCTGTTCA 60.203 47.619 0.00 0.00 0.00 3.18
5959 6668 2.086869 CGAGAAATGTGGGCTGTTCAT 58.913 47.619 0.00 0.00 0.00 2.57
5960 6669 2.096496 CGAGAAATGTGGGCTGTTCATC 59.904 50.000 0.00 0.00 0.00 2.92
5961 6670 3.350833 GAGAAATGTGGGCTGTTCATCT 58.649 45.455 0.00 0.00 0.00 2.90
5962 6671 3.087031 AGAAATGTGGGCTGTTCATCTG 58.913 45.455 0.00 0.00 0.00 2.90
5963 6672 2.592102 AATGTGGGCTGTTCATCTGT 57.408 45.000 0.00 0.00 0.00 3.41
5964 6673 1.830279 ATGTGGGCTGTTCATCTGTG 58.170 50.000 0.00 0.00 0.00 3.66
5965 6674 0.764271 TGTGGGCTGTTCATCTGTGA 59.236 50.000 0.00 0.00 0.00 3.58
5966 6675 1.142667 TGTGGGCTGTTCATCTGTGAA 59.857 47.619 0.00 0.00 41.89 3.18
5967 6676 2.229792 GTGGGCTGTTCATCTGTGAAA 58.770 47.619 0.00 0.00 45.38 2.69
5968 6677 2.821969 GTGGGCTGTTCATCTGTGAAAT 59.178 45.455 0.00 0.00 45.38 2.17
5969 6678 3.084039 TGGGCTGTTCATCTGTGAAATC 58.916 45.455 0.00 0.00 45.38 2.17
5970 6679 3.245016 TGGGCTGTTCATCTGTGAAATCT 60.245 43.478 0.00 0.00 45.38 2.40
5971 6680 4.019411 TGGGCTGTTCATCTGTGAAATCTA 60.019 41.667 0.00 0.00 45.38 1.98
5972 6681 4.943705 GGGCTGTTCATCTGTGAAATCTAA 59.056 41.667 0.00 0.00 45.38 2.10
5973 6682 5.591877 GGGCTGTTCATCTGTGAAATCTAAT 59.408 40.000 0.00 0.00 45.38 1.73
5974 6683 6.459298 GGGCTGTTCATCTGTGAAATCTAATG 60.459 42.308 0.00 0.00 45.38 1.90
5975 6684 6.459298 GGCTGTTCATCTGTGAAATCTAATGG 60.459 42.308 0.00 0.00 45.38 3.16
5976 6685 6.094603 GCTGTTCATCTGTGAAATCTAATGGT 59.905 38.462 0.00 0.00 45.38 3.55
5977 6686 7.381766 TGTTCATCTGTGAAATCTAATGGTG 57.618 36.000 0.00 0.00 45.38 4.17
5978 6687 6.375174 TGTTCATCTGTGAAATCTAATGGTGG 59.625 38.462 0.00 0.00 45.38 4.61
5979 6688 5.439721 TCATCTGTGAAATCTAATGGTGGG 58.560 41.667 0.00 0.00 0.00 4.61
5980 6689 4.235079 TCTGTGAAATCTAATGGTGGGG 57.765 45.455 0.00 0.00 0.00 4.96
5981 6690 3.849574 TCTGTGAAATCTAATGGTGGGGA 59.150 43.478 0.00 0.00 0.00 4.81
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 481 1.475441 GCGTCTTCTCCGATGCTTCG 61.475 60.000 14.61 14.61 45.08 3.79
255 535 3.721706 CCTGGGCCTCTGGGTGAC 61.722 72.222 4.53 0.00 34.45 3.67
264 544 2.069165 GACAAGACAACCCTGGGCCT 62.069 60.000 14.08 1.98 0.00 5.19
273 553 2.527100 CGACGGATAGGACAAGACAAC 58.473 52.381 0.00 0.00 0.00 3.32
274 554 1.475280 CCGACGGATAGGACAAGACAA 59.525 52.381 8.64 0.00 0.00 3.18
275 555 1.100510 CCGACGGATAGGACAAGACA 58.899 55.000 8.64 0.00 0.00 3.41
276 556 1.334243 CTCCGACGGATAGGACAAGAC 59.666 57.143 18.71 0.00 32.33 3.01
277 557 1.676746 CTCCGACGGATAGGACAAGA 58.323 55.000 18.71 0.00 32.33 3.02
278 558 0.669077 CCTCCGACGGATAGGACAAG 59.331 60.000 18.71 2.56 32.33 3.16
279 559 0.256752 TCCTCCGACGGATAGGACAA 59.743 55.000 18.71 0.00 32.33 3.18
280 560 0.256752 TTCCTCCGACGGATAGGACA 59.743 55.000 21.20 11.79 27.71 4.02
397 690 4.029809 GAGGTGGGTGGGGGAACG 62.030 72.222 0.00 0.00 0.00 3.95
473 791 1.189524 TGATAAGGGGATACGGGGCG 61.190 60.000 0.00 0.00 37.60 6.13
475 793 0.613777 GCTGATAAGGGGATACGGGG 59.386 60.000 0.00 0.00 37.60 5.73
481 799 2.743718 CCGCGCTGATAAGGGGAT 59.256 61.111 5.56 0.00 42.30 3.85
556 874 7.855545 ACATCAACAAATAGAGATACAATCGC 58.144 34.615 0.00 0.00 0.00 4.58
590 908 6.459923 TGCATATAAGCGTCCATGTAATGTA 58.540 36.000 0.00 0.00 39.21 2.29
593 911 8.737168 AATATGCATATAAGCGTCCATGTAAT 57.263 30.769 19.39 0.00 37.31 1.89
594 912 8.450180 CAAATATGCATATAAGCGTCCATGTAA 58.550 33.333 19.39 0.00 37.31 2.41
595 913 7.606073 ACAAATATGCATATAAGCGTCCATGTA 59.394 33.333 19.39 0.00 37.31 2.29
596 914 6.430925 ACAAATATGCATATAAGCGTCCATGT 59.569 34.615 19.39 10.17 37.31 3.21
605 923 6.207221 TCTGCACCCACAAATATGCATATAAG 59.793 38.462 19.39 16.12 46.35 1.73
618 936 0.398696 AATACCGTCTGCACCCACAA 59.601 50.000 0.00 0.00 0.00 3.33
624 942 7.478520 AATATTGACTAAATACCGTCTGCAC 57.521 36.000 0.00 0.00 33.53 4.57
643 961 7.451566 ACCCTGAAGCTACAACAAAGAAATATT 59.548 33.333 0.00 0.00 0.00 1.28
646 964 5.140454 ACCCTGAAGCTACAACAAAGAAAT 58.860 37.500 0.00 0.00 0.00 2.17
647 965 4.532834 ACCCTGAAGCTACAACAAAGAAA 58.467 39.130 0.00 0.00 0.00 2.52
650 968 3.253432 GGAACCCTGAAGCTACAACAAAG 59.747 47.826 0.00 0.00 0.00 2.77
653 971 2.561478 GGAACCCTGAAGCTACAACA 57.439 50.000 0.00 0.00 0.00 3.33
675 993 3.129287 GGAGCGAATGAAAATGTGTGGAT 59.871 43.478 0.00 0.00 0.00 3.41
689 1007 0.107410 TGCCGTATTTGGGAGCGAAT 60.107 50.000 0.00 0.00 0.00 3.34
732 1050 1.019278 ACATGTCTAAACCGCCTGCG 61.019 55.000 4.20 4.20 39.44 5.18
762 1080 1.826385 ATTAACTGTCTGCCTGCACC 58.174 50.000 0.00 0.00 0.00 5.01
765 1083 2.729156 GCGAAATTAACTGTCTGCCTGC 60.729 50.000 0.00 0.00 0.00 4.85
784 1102 3.103911 GTCAGGAACGTCACGGCG 61.104 66.667 4.80 4.80 37.94 6.46
842 1160 4.626042 ACAGCAATTTCCAAAATTACGCA 58.374 34.783 8.99 0.00 0.00 5.24
843 1161 5.389411 GGAACAGCAATTTCCAAAATTACGC 60.389 40.000 6.21 0.00 42.04 4.42
844 1162 5.164100 CGGAACAGCAATTTCCAAAATTACG 60.164 40.000 10.57 0.00 42.51 3.18
845 1163 5.923684 TCGGAACAGCAATTTCCAAAATTAC 59.076 36.000 10.57 0.00 42.51 1.89
847 1165 4.954875 TCGGAACAGCAATTTCCAAAATT 58.045 34.783 10.57 0.00 42.51 1.82
848 1166 4.599047 TCGGAACAGCAATTTCCAAAAT 57.401 36.364 10.57 0.00 42.51 1.82
850 1168 3.383185 ACTTCGGAACAGCAATTTCCAAA 59.617 39.130 10.57 0.00 42.51 3.28
851 1169 2.955660 ACTTCGGAACAGCAATTTCCAA 59.044 40.909 10.57 4.67 42.51 3.53
852 1170 2.582052 ACTTCGGAACAGCAATTTCCA 58.418 42.857 10.57 0.00 42.51 3.53
853 1171 3.643159 AACTTCGGAACAGCAATTTCC 57.357 42.857 1.77 1.77 39.45 3.13
854 1172 4.606961 TGAAACTTCGGAACAGCAATTTC 58.393 39.130 0.00 0.00 0.00 2.17
855 1173 4.647424 TGAAACTTCGGAACAGCAATTT 57.353 36.364 0.00 0.00 0.00 1.82
856 1174 4.853924 ATGAAACTTCGGAACAGCAATT 57.146 36.364 0.00 0.00 0.00 2.32
857 1175 4.853924 AATGAAACTTCGGAACAGCAAT 57.146 36.364 0.00 0.00 0.00 3.56
858 1176 5.957842 ATAATGAAACTTCGGAACAGCAA 57.042 34.783 0.00 0.00 0.00 3.91
859 1177 5.471797 TGAATAATGAAACTTCGGAACAGCA 59.528 36.000 0.00 0.00 0.00 4.41
860 1178 5.938322 TGAATAATGAAACTTCGGAACAGC 58.062 37.500 0.00 0.00 0.00 4.40
861 1179 7.017645 CACTGAATAATGAAACTTCGGAACAG 58.982 38.462 0.00 0.00 0.00 3.16
862 1180 6.708502 TCACTGAATAATGAAACTTCGGAACA 59.291 34.615 0.00 0.00 0.00 3.18
863 1181 7.129109 TCACTGAATAATGAAACTTCGGAAC 57.871 36.000 0.00 0.00 0.00 3.62
864 1182 7.737972 TTCACTGAATAATGAAACTTCGGAA 57.262 32.000 0.00 0.00 31.95 4.30
865 1183 7.390440 ACATTCACTGAATAATGAAACTTCGGA 59.610 33.333 3.88 0.00 38.29 4.55
866 1184 7.482743 CACATTCACTGAATAATGAAACTTCGG 59.517 37.037 3.88 0.00 38.29 4.30
867 1185 8.017373 ACACATTCACTGAATAATGAAACTTCG 58.983 33.333 16.73 1.04 38.29 3.79
883 1201 3.815401 GCAAGACTAACCACACATTCACT 59.185 43.478 0.00 0.00 0.00 3.41
891 1209 3.388024 AGAAGACTGCAAGACTAACCACA 59.612 43.478 0.00 0.00 38.20 4.17
893 1211 4.689612 AAGAAGACTGCAAGACTAACCA 57.310 40.909 0.00 0.00 38.20 3.67
894 1212 6.378710 AAAAAGAAGACTGCAAGACTAACC 57.621 37.500 0.00 0.00 38.20 2.85
921 1240 5.870433 CCATTGCAGCAATTTCTAAATGACA 59.130 36.000 18.48 0.00 31.05 3.58
939 1258 6.129168 CGTCGTTCATATAAGACTACCATTGC 60.129 42.308 0.00 0.00 0.00 3.56
967 1286 0.744771 GCGCTCCTACTGAAAAGGGG 60.745 60.000 0.00 0.00 37.69 4.79
998 1317 2.919043 CTACCACCAGGGGCATCC 59.081 66.667 0.00 0.00 42.91 3.51
1019 1338 3.082579 GCGCCCGAAGAGGATGACT 62.083 63.158 0.00 0.00 45.00 3.41
1125 1444 4.625742 CACAAACCCTGAACTACATCTACG 59.374 45.833 0.00 0.00 0.00 3.51
1138 1457 2.851195 ACTCACTAAGCACAAACCCTG 58.149 47.619 0.00 0.00 0.00 4.45
1199 1518 0.314259 CGTCACGGCGAAATCGATTG 60.314 55.000 16.62 0.86 43.02 2.67
1200 1519 0.734942 ACGTCACGGCGAAATCGATT 60.735 50.000 16.62 4.39 43.02 3.34
1201 1520 0.734942 AACGTCACGGCGAAATCGAT 60.735 50.000 16.62 4.73 43.02 3.59
1202 1521 1.339235 GAACGTCACGGCGAAATCGA 61.339 55.000 16.62 0.00 43.02 3.59
1203 1522 1.056750 GAACGTCACGGCGAAATCG 59.943 57.895 16.62 14.75 43.27 3.34
1209 1528 3.103911 GTCAGGAACGTCACGGCG 61.104 66.667 4.80 4.80 37.94 6.46
1228 1547 3.530535 ACAATGGTTTTGGTTGCTCAAC 58.469 40.909 4.26 4.26 40.45 3.18
1233 1552 5.112686 TCAGTAAACAATGGTTTTGGTTGC 58.887 37.500 2.92 0.00 44.63 4.17
1308 1635 4.641396 ACTGCAAGACTAACTGCACATTA 58.359 39.130 0.00 0.00 37.43 1.90
1382 1711 2.422479 CCATCAATGAGACCTTGCACAG 59.578 50.000 0.00 0.00 0.00 3.66
1391 1720 5.320549 ACTGCAATTTCCATCAATGAGAC 57.679 39.130 0.00 0.00 0.00 3.36
1398 1727 4.059511 CTGCAAAACTGCAATTTCCATCA 58.940 39.130 0.00 0.00 44.88 3.07
1458 1787 3.252215 TGTGAGAAATGTACGGCAAAAGG 59.748 43.478 0.00 0.00 0.00 3.11
1485 1814 6.258287 GCAACAAATTAAATCCATGCATAGCA 59.742 34.615 0.00 0.00 44.86 3.49
1486 1815 6.293027 GGCAACAAATTAAATCCATGCATAGC 60.293 38.462 0.00 0.00 34.37 2.97
1532 1861 7.931015 TCCCTACCATAACAATTACAGATCT 57.069 36.000 0.00 0.00 0.00 2.75
1534 1863 8.723365 TCATTCCCTACCATAACAATTACAGAT 58.277 33.333 0.00 0.00 0.00 2.90
1550 1879 3.713826 TGTCCCAAGTTCATTCCCTAC 57.286 47.619 0.00 0.00 0.00 3.18
1551 1880 3.396276 TGTTGTCCCAAGTTCATTCCCTA 59.604 43.478 0.00 0.00 0.00 3.53
1892 2221 1.625616 CTACCTTAACGTGACTGGCG 58.374 55.000 0.00 0.00 0.00 5.69
2033 2364 7.452813 ACAGATTGTAGCCATCTCATGATAGTA 59.547 37.037 0.00 0.00 0.00 1.82
2062 2393 5.680594 ATACACCTGAAACCATACCGTTA 57.319 39.130 0.00 0.00 0.00 3.18
2262 2593 1.214175 TGGCCTCTTCACAGGTTTTGA 59.786 47.619 3.32 0.00 35.72 2.69
2307 2638 3.399305 AGAGGGATCACCAAAGTTTCCTT 59.601 43.478 0.00 0.00 43.89 3.36
2452 2978 7.972832 TTGTAACTACCACATTTCAGTTAGG 57.027 36.000 0.00 0.00 34.93 2.69
2483 3009 5.525378 AGCTGTAACAATTGATACTAGCTGC 59.475 40.000 29.63 22.04 36.94 5.25
2849 3390 6.479884 ACATCTGGGATAAATAAGGAGATGC 58.520 40.000 0.00 0.00 39.18 3.91
2917 3458 2.742348 TGTGATATACCCACGTCTGGT 58.258 47.619 10.87 10.87 39.97 4.00
2975 3516 1.001378 GTTGTGACAGTGGGATGCAAC 60.001 52.381 0.00 0.00 0.00 4.17
2981 3522 5.197451 ACTTATTTTGTTGTGACAGTGGGA 58.803 37.500 0.00 0.00 37.04 4.37
3104 3645 1.202348 GCTACCCCAAACAGTCAATGC 59.798 52.381 0.00 0.00 0.00 3.56
3115 3656 4.805744 TCCTTTTTACAAAGCTACCCCAA 58.194 39.130 0.00 0.00 38.53 4.12
3162 3703 9.550406 AATTCAAATTGACACTCAACATTTGAT 57.450 25.926 10.14 0.00 41.26 2.57
3164 3705 9.037737 AGAATTCAAATTGACACTCAACATTTG 57.962 29.630 8.44 2.82 39.45 2.32
3291 3832 6.069847 CCCAGGTACTTCCCAGTAGAATAAAA 60.070 42.308 0.00 0.00 36.09 1.52
3458 4006 4.081406 CCTCCCAAATGATTGTGAGTTCA 58.919 43.478 1.47 0.00 38.81 3.18
3466 4014 5.341872 TTTACATGCCTCCCAAATGATTG 57.658 39.130 0.00 0.00 36.25 2.67
3561 4112 9.301153 ACATGTAAAATTTCAAGTCAAGTTCAC 57.699 29.630 0.00 0.00 0.00 3.18
3566 4117 8.602328 TGCAAACATGTAAAATTTCAAGTCAAG 58.398 29.630 0.00 0.00 0.00 3.02
3591 4142 1.073763 TGTTGGGGAGGTGATGTTCTG 59.926 52.381 0.00 0.00 0.00 3.02
3625 4181 6.790319 ACCTATAGGAAAAATGTCCAGTGTT 58.210 36.000 26.01 0.00 40.48 3.32
3626 4182 6.388619 ACCTATAGGAAAAATGTCCAGTGT 57.611 37.500 26.01 0.00 40.48 3.55
3627 4183 6.404734 GCAACCTATAGGAAAAATGTCCAGTG 60.405 42.308 26.01 0.00 40.48 3.66
3630 4186 5.575157 TGCAACCTATAGGAAAAATGTCCA 58.425 37.500 26.01 7.39 40.48 4.02
3644 4200 4.774779 TCCCTAATCCCTATGCAACCTAT 58.225 43.478 0.00 0.00 0.00 2.57
3686 4242 5.349543 GGGATTGTTGAAATTTGAGCATGTC 59.650 40.000 0.00 0.00 0.00 3.06
3727 4283 4.346709 TGGTCATAGTGGTTTTGAGAGTCA 59.653 41.667 0.00 0.00 0.00 3.41
3728 4284 4.894784 TGGTCATAGTGGTTTTGAGAGTC 58.105 43.478 0.00 0.00 0.00 3.36
3729 4285 4.974645 TGGTCATAGTGGTTTTGAGAGT 57.025 40.909 0.00 0.00 0.00 3.24
3730 4286 7.106239 ACTAATGGTCATAGTGGTTTTGAGAG 58.894 38.462 0.00 0.00 0.00 3.20
3819 4377 9.762933 AACAATAATTTGCCAACCATATCATAC 57.237 29.630 0.00 0.00 36.22 2.39
3852 4410 9.151177 ACATTCTTATATTAGTTTACGGAGGGA 57.849 33.333 0.00 0.00 0.00 4.20
3853 4411 9.774413 AACATTCTTATATTAGTTTACGGAGGG 57.226 33.333 0.00 0.00 0.00 4.30
3904 4462 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
3906 4464 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
3916 4474 9.765295 AGAATTTAGTACTCCCTCTGTAAACTA 57.235 33.333 0.00 0.00 0.00 2.24
3917 4475 8.667592 AGAATTTAGTACTCCCTCTGTAAACT 57.332 34.615 0.00 0.00 0.00 2.66
3918 4476 9.152595 CAAGAATTTAGTACTCCCTCTGTAAAC 57.847 37.037 0.00 0.00 0.00 2.01
3919 4477 8.877195 ACAAGAATTTAGTACTCCCTCTGTAAA 58.123 33.333 0.00 0.00 0.00 2.01
3920 4478 8.431910 ACAAGAATTTAGTACTCCCTCTGTAA 57.568 34.615 0.00 0.00 0.00 2.41
3921 4479 8.431910 AACAAGAATTTAGTACTCCCTCTGTA 57.568 34.615 0.00 0.00 0.00 2.74
3922 4480 6.936968 ACAAGAATTTAGTACTCCCTCTGT 57.063 37.500 0.00 0.00 0.00 3.41
3923 4481 8.622948 AAAACAAGAATTTAGTACTCCCTCTG 57.377 34.615 0.00 0.00 0.00 3.35
3924 4482 8.661345 AGAAAACAAGAATTTAGTACTCCCTCT 58.339 33.333 0.00 0.00 0.00 3.69
3925 4483 8.850007 AGAAAACAAGAATTTAGTACTCCCTC 57.150 34.615 0.00 0.00 0.00 4.30
3937 4495 9.831737 CACGATCTGATTAAGAAAACAAGAATT 57.168 29.630 0.00 0.00 38.79 2.17
3973 4531 2.901192 TGTTCCGAGTTCATTCCCTACA 59.099 45.455 0.00 0.00 0.00 2.74
3988 4546 0.304705 GTTATCCGCATGCTGTTCCG 59.695 55.000 17.13 0.00 0.00 4.30
4097 4655 1.431633 TGAGAGGGTCTAGTTCCACCA 59.568 52.381 1.16 0.00 33.91 4.17
4098 4656 2.233305 TGAGAGGGTCTAGTTCCACC 57.767 55.000 8.46 0.28 0.00 4.61
4184 4742 4.523943 TGGTTAGAAATCTGTGCAGCATTT 59.476 37.500 0.00 0.00 0.00 2.32
4266 4824 5.649782 CAAGTATTTGCATCCCAAAGAGT 57.350 39.130 0.00 0.00 45.87 3.24
4319 4877 4.501071 TCAATCTTACCTTAACGTGAGCC 58.499 43.478 0.00 0.00 0.00 4.70
4401 4959 2.640332 TGGTCCTGCCAAGTAATACACA 59.360 45.455 0.00 0.00 45.94 3.72
4501 5059 0.104777 TCCTAGCTGGCCTGGATGAT 60.105 55.000 12.06 0.00 35.26 2.45
4564 5122 5.469760 CACCCCATTCAAGTTTTCATTTTCC 59.530 40.000 0.00 0.00 0.00 3.13
4577 5135 2.989480 GGGCATTCACCCCATTCAA 58.011 52.632 0.00 0.00 45.00 2.69
4606 5164 3.056328 GCGGCCTCTTCAACACCC 61.056 66.667 0.00 0.00 0.00 4.61
4636 5194 0.400213 TGTTCCCTTCATCGGTGCTT 59.600 50.000 0.00 0.00 0.00 3.91
4771 5329 5.592688 GTCTCTCCTACTGCACTTCTCTATT 59.407 44.000 0.00 0.00 0.00 1.73
4822 5380 1.912220 CGGGAGGCCCTTCATGTTA 59.088 57.895 0.00 0.00 42.67 2.41
4924 5482 1.872952 CAGATCGTTTTGTGAGGCACA 59.127 47.619 0.00 0.00 43.02 4.57
4977 5535 4.240881 ACCATCGTAGGTACCAACTAGA 57.759 45.455 15.94 6.36 40.98 2.43
5079 5708 4.837896 TCTTCTAGCATGTACAGGATCG 57.162 45.455 12.53 0.57 0.00 3.69
5194 5823 1.720781 AATTGCTTTGCCTTCCTGGT 58.279 45.000 0.00 0.00 38.35 4.00
5209 5838 2.636647 ACCAAACAGGCCCAAAATTG 57.363 45.000 0.00 0.00 43.14 2.32
5214 5843 1.341156 CCCAAACCAAACAGGCCCAA 61.341 55.000 0.00 0.00 43.14 4.12
5215 5844 1.764054 CCCAAACCAAACAGGCCCA 60.764 57.895 0.00 0.00 43.14 5.36
5216 5845 1.458588 TCCCAAACCAAACAGGCCC 60.459 57.895 0.00 0.00 43.14 5.80
5217 5846 0.759060 AGTCCCAAACCAAACAGGCC 60.759 55.000 0.00 0.00 43.14 5.19
5218 5847 1.119684 AAGTCCCAAACCAAACAGGC 58.880 50.000 0.00 0.00 43.14 4.85
5219 5848 5.545063 AATTAAGTCCCAAACCAAACAGG 57.455 39.130 0.00 0.00 45.67 4.00
5220 5849 5.236263 GCAAATTAAGTCCCAAACCAAACAG 59.764 40.000 0.00 0.00 0.00 3.16
5221 5850 5.119694 GCAAATTAAGTCCCAAACCAAACA 58.880 37.500 0.00 0.00 0.00 2.83
5222 5851 4.513692 GGCAAATTAAGTCCCAAACCAAAC 59.486 41.667 0.00 0.00 0.00 2.93
5223 5852 4.164221 TGGCAAATTAAGTCCCAAACCAAA 59.836 37.500 0.00 0.00 0.00 3.28
5224 5853 3.711704 TGGCAAATTAAGTCCCAAACCAA 59.288 39.130 0.00 0.00 0.00 3.67
5225 5854 3.309296 TGGCAAATTAAGTCCCAAACCA 58.691 40.909 0.00 0.00 0.00 3.67
5226 5855 4.020662 TCATGGCAAATTAAGTCCCAAACC 60.021 41.667 0.00 0.00 0.00 3.27
5227 5856 4.929211 GTCATGGCAAATTAAGTCCCAAAC 59.071 41.667 0.00 0.00 0.00 2.93
5228 5857 4.837860 AGTCATGGCAAATTAAGTCCCAAA 59.162 37.500 0.00 0.00 0.00 3.28
5229 5858 4.415596 AGTCATGGCAAATTAAGTCCCAA 58.584 39.130 0.00 0.00 0.00 4.12
5230 5859 4.046286 AGTCATGGCAAATTAAGTCCCA 57.954 40.909 0.00 0.00 0.00 4.37
5231 5860 5.067805 CCTTAGTCATGGCAAATTAAGTCCC 59.932 44.000 0.00 0.00 0.00 4.46
5232 5861 5.652452 ACCTTAGTCATGGCAAATTAAGTCC 59.348 40.000 0.00 0.00 0.00 3.85
5233 5862 6.759497 ACCTTAGTCATGGCAAATTAAGTC 57.241 37.500 0.00 0.00 0.00 3.01
5234 5863 7.339466 CCTAACCTTAGTCATGGCAAATTAAGT 59.661 37.037 0.00 0.00 0.00 2.24
5235 5864 7.682021 GCCTAACCTTAGTCATGGCAAATTAAG 60.682 40.741 0.00 0.00 36.29 1.85
5236 5865 6.096282 GCCTAACCTTAGTCATGGCAAATTAA 59.904 38.462 0.00 0.00 36.29 1.40
5237 5866 5.592688 GCCTAACCTTAGTCATGGCAAATTA 59.407 40.000 0.00 0.00 36.29 1.40
5238 5867 4.402474 GCCTAACCTTAGTCATGGCAAATT 59.598 41.667 0.00 0.00 36.29 1.82
5239 5868 3.954258 GCCTAACCTTAGTCATGGCAAAT 59.046 43.478 0.00 0.00 36.29 2.32
5240 5869 3.352648 GCCTAACCTTAGTCATGGCAAA 58.647 45.455 0.00 0.00 36.29 3.68
5241 5870 2.679639 CGCCTAACCTTAGTCATGGCAA 60.680 50.000 0.00 0.00 36.14 4.52
5242 5871 1.134521 CGCCTAACCTTAGTCATGGCA 60.135 52.381 0.00 0.00 36.14 4.92
5243 5872 1.134491 ACGCCTAACCTTAGTCATGGC 60.134 52.381 0.00 0.00 34.29 4.40
5244 5873 2.936498 CAACGCCTAACCTTAGTCATGG 59.064 50.000 0.00 0.00 0.00 3.66
5245 5874 2.936498 CCAACGCCTAACCTTAGTCATG 59.064 50.000 0.00 0.00 0.00 3.07
5246 5875 2.679930 GCCAACGCCTAACCTTAGTCAT 60.680 50.000 0.00 0.00 0.00 3.06
5247 5876 1.338389 GCCAACGCCTAACCTTAGTCA 60.338 52.381 0.00 0.00 0.00 3.41
5248 5877 1.366679 GCCAACGCCTAACCTTAGTC 58.633 55.000 0.00 0.00 0.00 2.59
5249 5878 3.545724 GCCAACGCCTAACCTTAGT 57.454 52.632 0.00 0.00 0.00 2.24
5279 5908 4.724697 CACAGTTTCTGCGGCGCG 62.725 66.667 28.09 21.17 34.37 6.86
5280 5909 4.389576 CCACAGTTTCTGCGGCGC 62.390 66.667 27.44 27.44 34.37 6.53
5283 5912 2.250939 TTCGCCACAGTTTCTGCGG 61.251 57.895 2.76 0.10 46.51 5.69
5285 5914 0.380378 TTGTTCGCCACAGTTTCTGC 59.620 50.000 0.00 0.00 36.48 4.26
5286 5915 2.842208 TTTGTTCGCCACAGTTTCTG 57.158 45.000 0.00 0.00 36.48 3.02
5287 5916 2.477189 CGTTTTGTTCGCCACAGTTTCT 60.477 45.455 0.00 0.00 36.48 2.52
5288 5917 1.843753 CGTTTTGTTCGCCACAGTTTC 59.156 47.619 0.00 0.00 36.48 2.78
5289 5918 1.469308 TCGTTTTGTTCGCCACAGTTT 59.531 42.857 0.00 0.00 36.48 2.66
5290 5919 1.063469 CTCGTTTTGTTCGCCACAGTT 59.937 47.619 0.00 0.00 36.48 3.16
5291 5920 0.655733 CTCGTTTTGTTCGCCACAGT 59.344 50.000 0.00 0.00 36.48 3.55
5292 5921 0.657368 GCTCGTTTTGTTCGCCACAG 60.657 55.000 0.00 0.00 36.48 3.66
5293 5922 1.353804 GCTCGTTTTGTTCGCCACA 59.646 52.632 0.00 0.00 0.00 4.17
5294 5923 1.721133 CGCTCGTTTTGTTCGCCAC 60.721 57.895 0.00 0.00 0.00 5.01
5295 5924 2.629210 CGCTCGTTTTGTTCGCCA 59.371 55.556 0.00 0.00 0.00 5.69
5296 5925 2.795389 GCGCTCGTTTTGTTCGCC 60.795 61.111 0.00 0.00 39.91 5.54
5297 5926 2.795389 GGCGCTCGTTTTGTTCGC 60.795 61.111 7.64 0.00 44.39 4.70
5298 5927 2.496794 CGGCGCTCGTTTTGTTCG 60.497 61.111 7.64 0.00 0.00 3.95
5299 5928 2.795389 GCGGCGCTCGTTTTGTTC 60.795 61.111 26.86 0.00 41.72 3.18
5300 5929 3.578272 TGCGGCGCTCGTTTTGTT 61.578 55.556 33.26 0.00 41.72 2.83
5301 5930 4.307908 GTGCGGCGCTCGTTTTGT 62.308 61.111 33.26 0.00 41.72 2.83
5304 5933 3.869473 TAAGGTGCGGCGCTCGTTT 62.869 57.895 35.48 27.55 41.72 3.60
5305 5934 4.367023 TAAGGTGCGGCGCTCGTT 62.367 61.111 33.73 33.73 41.72 3.85
5306 5935 4.796231 CTAAGGTGCGGCGCTCGT 62.796 66.667 33.26 26.98 41.72 4.18
5312 5941 1.663173 TTTTTGCCTAAGGTGCGGC 59.337 52.632 0.00 0.00 46.46 6.53
5337 5966 3.062763 CAATCTATACGGGCTTCTGCAG 58.937 50.000 7.63 7.63 41.91 4.41
5338 5967 2.434336 ACAATCTATACGGGCTTCTGCA 59.566 45.455 0.00 0.00 41.91 4.41
5339 5968 2.802816 CACAATCTATACGGGCTTCTGC 59.197 50.000 0.00 0.00 38.76 4.26
5340 5969 3.393800 CCACAATCTATACGGGCTTCTG 58.606 50.000 0.00 0.00 0.00 3.02
5341 5970 2.224305 GCCACAATCTATACGGGCTTCT 60.224 50.000 0.00 0.00 38.37 2.85
5342 5971 2.143925 GCCACAATCTATACGGGCTTC 58.856 52.381 0.00 0.00 38.37 3.86
5343 5972 1.488812 TGCCACAATCTATACGGGCTT 59.511 47.619 0.00 0.00 41.86 4.35
5344 5973 1.128200 TGCCACAATCTATACGGGCT 58.872 50.000 0.00 0.00 41.86 5.19
5345 5974 1.873591 CTTGCCACAATCTATACGGGC 59.126 52.381 0.00 0.00 41.70 6.13
5346 5975 1.873591 GCTTGCCACAATCTATACGGG 59.126 52.381 0.00 0.00 0.00 5.28
5347 5976 1.873591 GGCTTGCCACAATCTATACGG 59.126 52.381 6.79 0.00 0.00 4.02
5348 5977 2.560504 TGGCTTGCCACAATCTATACG 58.439 47.619 10.65 0.00 0.00 3.06
5349 5978 4.672409 GTTTGGCTTGCCACAATCTATAC 58.328 43.478 14.52 0.00 0.00 1.47
5350 5979 3.376859 CGTTTGGCTTGCCACAATCTATA 59.623 43.478 14.52 0.00 0.00 1.31
5351 5980 2.164219 CGTTTGGCTTGCCACAATCTAT 59.836 45.455 14.52 0.00 0.00 1.98
5352 5981 1.539388 CGTTTGGCTTGCCACAATCTA 59.461 47.619 14.52 0.00 0.00 1.98
5353 5982 0.314935 CGTTTGGCTTGCCACAATCT 59.685 50.000 14.52 0.00 0.00 2.40
5354 5983 0.031994 ACGTTTGGCTTGCCACAATC 59.968 50.000 14.52 4.48 0.00 2.67
5355 5984 0.031994 GACGTTTGGCTTGCCACAAT 59.968 50.000 14.52 0.00 0.00 2.71
5356 5985 1.315981 TGACGTTTGGCTTGCCACAA 61.316 50.000 14.52 9.11 0.00 3.33
5357 5986 1.723608 CTGACGTTTGGCTTGCCACA 61.724 55.000 14.52 4.96 0.00 4.17
5358 5987 1.008538 CTGACGTTTGGCTTGCCAC 60.009 57.895 14.52 3.00 0.00 5.01
5359 5988 0.179043 TACTGACGTTTGGCTTGCCA 60.179 50.000 10.65 10.65 0.00 4.92
5360 5989 0.237498 GTACTGACGTTTGGCTTGCC 59.763 55.000 4.43 4.43 0.00 4.52
5361 5990 0.941542 TGTACTGACGTTTGGCTTGC 59.058 50.000 0.00 0.00 0.00 4.01
5362 5991 3.684103 TTTGTACTGACGTTTGGCTTG 57.316 42.857 0.00 0.00 0.00 4.01
5363 5992 3.181494 GGTTTTGTACTGACGTTTGGCTT 60.181 43.478 0.00 0.00 0.00 4.35
5364 5993 2.356695 GGTTTTGTACTGACGTTTGGCT 59.643 45.455 0.00 0.00 0.00 4.75
5365 5994 2.097791 TGGTTTTGTACTGACGTTTGGC 59.902 45.455 0.00 0.00 0.00 4.52
5366 5995 4.358494 TTGGTTTTGTACTGACGTTTGG 57.642 40.909 0.00 0.00 0.00 3.28
5367 5996 5.059955 GTGTTTGGTTTTGTACTGACGTTTG 59.940 40.000 0.00 0.00 0.00 2.93
5368 5997 5.155643 GTGTTTGGTTTTGTACTGACGTTT 58.844 37.500 0.00 0.00 0.00 3.60
5369 5998 4.215827 TGTGTTTGGTTTTGTACTGACGTT 59.784 37.500 0.00 0.00 0.00 3.99
5370 5999 3.752222 TGTGTTTGGTTTTGTACTGACGT 59.248 39.130 0.00 0.00 0.00 4.34
5371 6000 4.092816 GTGTGTTTGGTTTTGTACTGACG 58.907 43.478 0.00 0.00 0.00 4.35
5372 6001 4.092816 CGTGTGTTTGGTTTTGTACTGAC 58.907 43.478 0.00 0.00 0.00 3.51
5373 6002 3.426426 GCGTGTGTTTGGTTTTGTACTGA 60.426 43.478 0.00 0.00 0.00 3.41
5374 6003 2.849473 GCGTGTGTTTGGTTTTGTACTG 59.151 45.455 0.00 0.00 0.00 2.74
5375 6004 2.159352 GGCGTGTGTTTGGTTTTGTACT 60.159 45.455 0.00 0.00 0.00 2.73
5376 6005 2.186891 GGCGTGTGTTTGGTTTTGTAC 58.813 47.619 0.00 0.00 0.00 2.90
5377 6006 1.134560 GGGCGTGTGTTTGGTTTTGTA 59.865 47.619 0.00 0.00 0.00 2.41
5378 6007 0.108567 GGGCGTGTGTTTGGTTTTGT 60.109 50.000 0.00 0.00 0.00 2.83
5379 6008 0.108615 TGGGCGTGTGTTTGGTTTTG 60.109 50.000 0.00 0.00 0.00 2.44
5380 6009 0.174617 CTGGGCGTGTGTTTGGTTTT 59.825 50.000 0.00 0.00 0.00 2.43
5381 6010 1.671901 CCTGGGCGTGTGTTTGGTTT 61.672 55.000 0.00 0.00 0.00 3.27
5382 6011 2.124693 CCTGGGCGTGTGTTTGGTT 61.125 57.895 0.00 0.00 0.00 3.67
5383 6012 2.518349 CCTGGGCGTGTGTTTGGT 60.518 61.111 0.00 0.00 0.00 3.67
5384 6013 2.203280 TCCTGGGCGTGTGTTTGG 60.203 61.111 0.00 0.00 0.00 3.28
5385 6014 2.260869 CCTCCTGGGCGTGTGTTTG 61.261 63.158 0.00 0.00 0.00 2.93
5386 6015 2.113139 CCTCCTGGGCGTGTGTTT 59.887 61.111 0.00 0.00 0.00 2.83
5387 6016 2.752807 AACCTCCTGGGCGTGTGTT 61.753 57.895 0.00 0.00 39.10 3.32
5388 6017 3.168528 AACCTCCTGGGCGTGTGT 61.169 61.111 0.00 0.00 39.10 3.72
5389 6018 2.669569 CAACCTCCTGGGCGTGTG 60.670 66.667 0.00 0.00 39.10 3.82
5390 6019 3.953775 CCAACCTCCTGGGCGTGT 61.954 66.667 0.00 0.00 39.10 4.49
5396 6025 2.982130 CGAGTCCCAACCTCCTGG 59.018 66.667 0.00 0.00 39.83 4.45
5397 6026 2.266055 GCGAGTCCCAACCTCCTG 59.734 66.667 0.00 0.00 0.00 3.86
5398 6027 3.003763 GGCGAGTCCCAACCTCCT 61.004 66.667 0.00 0.00 0.00 3.69
5399 6028 3.319198 TGGCGAGTCCCAACCTCC 61.319 66.667 0.00 0.00 30.32 4.30
5400 6029 2.047179 GTGGCGAGTCCCAACCTC 60.047 66.667 2.30 0.00 36.46 3.85
5401 6030 2.847234 TGTGGCGAGTCCCAACCT 60.847 61.111 2.30 0.00 36.46 3.50
5402 6031 2.668550 GTGTGGCGAGTCCCAACC 60.669 66.667 2.30 0.00 36.46 3.77
5403 6032 3.041940 CGTGTGGCGAGTCCCAAC 61.042 66.667 2.30 3.61 44.77 3.77
5404 6033 2.596553 AAACGTGTGGCGAGTCCCAA 62.597 55.000 0.00 0.00 44.77 4.12
5405 6034 3.096633 AAACGTGTGGCGAGTCCCA 62.097 57.895 0.00 0.00 44.77 4.37
5406 6035 2.280592 AAACGTGTGGCGAGTCCC 60.281 61.111 0.00 0.00 44.77 4.46
5407 6036 2.604174 CCAAACGTGTGGCGAGTCC 61.604 63.158 12.93 0.00 44.77 3.85
5408 6037 2.935955 CCAAACGTGTGGCGAGTC 59.064 61.111 12.93 0.00 44.77 3.36
5420 6049 2.914908 ATCGGTTGCCACGCCAAAC 61.915 57.895 0.00 0.00 0.00 2.93
5421 6050 2.596046 ATCGGTTGCCACGCCAAA 60.596 55.556 0.00 0.00 0.00 3.28
5422 6051 3.361158 CATCGGTTGCCACGCCAA 61.361 61.111 0.00 0.00 0.00 4.52
5435 6064 2.360600 TTTGGTTCCCGGCCATCG 60.361 61.111 2.24 0.00 35.71 3.84
5436 6065 1.595093 CTGTTTGGTTCCCGGCCATC 61.595 60.000 2.24 0.00 35.71 3.51
5437 6066 1.606313 CTGTTTGGTTCCCGGCCAT 60.606 57.895 2.24 0.00 35.71 4.40
5438 6067 2.203422 CTGTTTGGTTCCCGGCCA 60.203 61.111 2.24 0.00 0.00 5.36
5439 6068 3.680786 GCTGTTTGGTTCCCGGCC 61.681 66.667 0.00 0.00 0.00 6.13
5440 6069 3.680786 GGCTGTTTGGTTCCCGGC 61.681 66.667 0.00 0.00 0.00 6.13
5441 6070 1.971695 GAGGCTGTTTGGTTCCCGG 60.972 63.158 0.00 0.00 0.00 5.73
5442 6071 0.537371 AAGAGGCTGTTTGGTTCCCG 60.537 55.000 0.00 0.00 0.00 5.14
5443 6072 1.704641 AAAGAGGCTGTTTGGTTCCC 58.295 50.000 9.05 0.00 0.00 3.97
5444 6073 3.826729 ACATAAAGAGGCTGTTTGGTTCC 59.173 43.478 18.88 0.00 0.00 3.62
5445 6074 5.453567 AACATAAAGAGGCTGTTTGGTTC 57.546 39.130 18.88 0.00 29.06 3.62
5446 6075 5.869649 AAACATAAAGAGGCTGTTTGGTT 57.130 34.783 18.88 17.98 40.54 3.67
5450 6079 6.655078 ACATCAAACATAAAGAGGCTGTTT 57.345 33.333 14.46 14.46 42.24 2.83
5451 6080 6.655078 AACATCAAACATAAAGAGGCTGTT 57.345 33.333 0.00 0.00 34.71 3.16
5452 6081 6.265196 TGAAACATCAAACATAAAGAGGCTGT 59.735 34.615 0.00 0.00 0.00 4.40
5453 6082 6.680810 TGAAACATCAAACATAAAGAGGCTG 58.319 36.000 0.00 0.00 0.00 4.85
5454 6083 6.899393 TGAAACATCAAACATAAAGAGGCT 57.101 33.333 0.00 0.00 0.00 4.58
5455 6084 7.115378 CAGTTGAAACATCAAACATAAAGAGGC 59.885 37.037 0.00 0.00 0.00 4.70
5456 6085 8.352201 TCAGTTGAAACATCAAACATAAAGAGG 58.648 33.333 0.00 0.00 0.00 3.69
5457 6086 9.903682 ATCAGTTGAAACATCAAACATAAAGAG 57.096 29.630 0.00 0.00 0.00 2.85
5458 6087 9.681692 CATCAGTTGAAACATCAAACATAAAGA 57.318 29.630 0.00 0.00 0.00 2.52
5459 6088 8.430063 GCATCAGTTGAAACATCAAACATAAAG 58.570 33.333 0.00 0.00 0.00 1.85
5460 6089 8.143193 AGCATCAGTTGAAACATCAAACATAAA 58.857 29.630 0.00 0.00 0.00 1.40
5544 6173 4.034626 CCACTCATCAGTCGTCACTAGTAG 59.965 50.000 0.00 0.00 0.00 2.57
5596 6225 3.003689 CGAATTCTGAGTGCAAAACTGGT 59.996 43.478 3.52 0.00 40.07 4.00
5631 6260 9.162764 GAACTCTCCTTGCTTAAAATATGTGTA 57.837 33.333 0.00 0.00 0.00 2.90
5639 6268 4.062991 GGTCGAACTCTCCTTGCTTAAAA 58.937 43.478 0.00 0.00 0.00 1.52
5657 6286 3.034721 TGTTTAGTGCCTACAAGGTCG 57.965 47.619 0.00 0.00 37.80 4.79
5665 6294 4.422984 AGGGAGTAGTTGTTTAGTGCCTA 58.577 43.478 0.00 0.00 41.42 3.93
5667 6296 3.597255 GAGGGAGTAGTTGTTTAGTGCC 58.403 50.000 0.00 0.00 35.38 5.01
5676 6305 1.879575 TGGGATGGAGGGAGTAGTTG 58.120 55.000 0.00 0.00 0.00 3.16
5708 6338 6.913873 TCTACAAGTAGTGGTGTCAAAAAC 57.086 37.500 7.09 0.00 34.84 2.43
5714 6344 7.916450 GTGATCTTATCTACAAGTAGTGGTGTC 59.084 40.741 7.09 2.25 34.84 3.67
5718 6348 8.132362 GTCAGTGATCTTATCTACAAGTAGTGG 58.868 40.741 7.09 0.00 34.84 4.00
5719 6349 8.132362 GGTCAGTGATCTTATCTACAAGTAGTG 58.868 40.741 7.09 0.00 34.84 2.74
5721 6351 8.226819 TGGTCAGTGATCTTATCTACAAGTAG 57.773 38.462 4.73 0.77 34.56 2.57
5728 6404 7.565029 TGGAGATTTGGTCAGTGATCTTATCTA 59.435 37.037 16.08 4.66 0.00 1.98
5934 6643 0.541863 AGCCCACATTTCTCGTAGGG 59.458 55.000 0.00 0.00 39.33 3.53
5935 6644 1.066143 ACAGCCCACATTTCTCGTAGG 60.066 52.381 0.00 0.00 0.00 3.18
5936 6645 2.386661 ACAGCCCACATTTCTCGTAG 57.613 50.000 0.00 0.00 0.00 3.51
5937 6646 2.037902 TGAACAGCCCACATTTCTCGTA 59.962 45.455 0.00 0.00 0.00 3.43
5938 6647 1.202758 TGAACAGCCCACATTTCTCGT 60.203 47.619 0.00 0.00 0.00 4.18
5939 6648 1.522668 TGAACAGCCCACATTTCTCG 58.477 50.000 0.00 0.00 0.00 4.04
5940 6649 3.128242 CAGATGAACAGCCCACATTTCTC 59.872 47.826 0.00 0.00 0.00 2.87
5941 6650 3.087031 CAGATGAACAGCCCACATTTCT 58.913 45.455 0.00 0.00 0.00 2.52
5942 6651 2.821969 ACAGATGAACAGCCCACATTTC 59.178 45.455 0.00 0.00 0.00 2.17
5943 6652 2.559668 CACAGATGAACAGCCCACATTT 59.440 45.455 0.00 0.00 0.00 2.32
5944 6653 2.165167 CACAGATGAACAGCCCACATT 58.835 47.619 0.00 0.00 0.00 2.71
5945 6654 1.352017 TCACAGATGAACAGCCCACAT 59.648 47.619 0.00 0.00 0.00 3.21
5946 6655 0.764271 TCACAGATGAACAGCCCACA 59.236 50.000 0.00 0.00 0.00 4.17
5947 6656 1.896220 TTCACAGATGAACAGCCCAC 58.104 50.000 0.00 0.00 40.01 4.61
5948 6657 2.655090 TTTCACAGATGAACAGCCCA 57.345 45.000 0.00 0.00 44.66 5.36
5949 6658 3.350833 AGATTTCACAGATGAACAGCCC 58.649 45.455 0.00 0.00 44.66 5.19
5950 6659 6.459298 CCATTAGATTTCACAGATGAACAGCC 60.459 42.308 0.00 0.00 44.66 4.85
5951 6660 6.094603 ACCATTAGATTTCACAGATGAACAGC 59.905 38.462 0.00 0.00 44.66 4.40
5952 6661 7.414873 CCACCATTAGATTTCACAGATGAACAG 60.415 40.741 0.00 0.00 44.66 3.16
5953 6662 6.375174 CCACCATTAGATTTCACAGATGAACA 59.625 38.462 0.00 0.00 44.66 3.18
5954 6663 6.183360 CCCACCATTAGATTTCACAGATGAAC 60.183 42.308 0.00 0.00 44.66 3.18
5955 6664 5.887598 CCCACCATTAGATTTCACAGATGAA 59.112 40.000 0.00 0.00 43.28 2.57
5956 6665 5.439721 CCCACCATTAGATTTCACAGATGA 58.560 41.667 0.00 0.00 0.00 2.92
5957 6666 4.581824 CCCCACCATTAGATTTCACAGATG 59.418 45.833 0.00 0.00 0.00 2.90
5958 6667 4.478317 TCCCCACCATTAGATTTCACAGAT 59.522 41.667 0.00 0.00 0.00 2.90
5959 6668 3.849574 TCCCCACCATTAGATTTCACAGA 59.150 43.478 0.00 0.00 0.00 3.41
5960 6669 4.235079 TCCCCACCATTAGATTTCACAG 57.765 45.455 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.