Multiple sequence alignment - TraesCS2A01G451200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G451200 chr2A 100.000 3198 0 0 677 3874 700673671 700670474 0.000000e+00 5906.0
1 TraesCS2A01G451200 chr2A 100.000 334 0 0 1 334 700674347 700674014 5.500000e-173 617.0
2 TraesCS2A01G451200 chr2D 88.413 3271 222 81 677 3874 560866296 560863110 0.000000e+00 3795.0
3 TraesCS2A01G451200 chr2B 92.450 2437 124 26 677 3103 669190743 669193129 0.000000e+00 3426.0
4 TraesCS2A01G451200 chr2B 84.706 255 30 4 3570 3816 669193453 669193706 2.990000e-61 246.0
5 TraesCS2A01G451200 chr2B 87.821 156 16 1 2227 2382 781712177 781712329 3.080000e-41 180.0
6 TraesCS2A01G451200 chr2B 100.000 29 0 0 949 977 515514968 515514940 2.000000e-03 54.7
7 TraesCS2A01G451200 chr7D 80.233 1462 230 34 1494 2938 621159018 621160437 0.000000e+00 1044.0
8 TraesCS2A01G451200 chr7D 78.974 1365 216 42 1592 2938 621203452 621204763 0.000000e+00 865.0
9 TraesCS2A01G451200 chr7D 82.016 367 64 2 1091 1456 621202792 621203157 1.050000e-80 311.0
10 TraesCS2A01G451200 chr7A 80.307 1305 202 31 1115 2402 715785589 715784323 0.000000e+00 935.0
11 TraesCS2A01G451200 chr7A 80.514 1129 178 28 1650 2764 715925501 715924401 0.000000e+00 828.0
12 TraesCS2A01G451200 chr7A 84.010 419 60 7 2523 2938 715781372 715780958 2.800000e-106 396.0
13 TraesCS2A01G451200 chr7A 80.214 374 63 9 1092 1456 715925917 715925546 1.770000e-68 270.0
14 TraesCS2A01G451200 chr7B 77.796 1189 207 30 1553 2717 717226130 717224975 0.000000e+00 680.0
15 TraesCS2A01G451200 chr7B 77.601 1192 204 34 1553 2717 717150658 717149503 0.000000e+00 664.0
16 TraesCS2A01G451200 chrUn 82.186 247 30 11 10 250 5357249 5357487 2.360000e-47 200.0
17 TraesCS2A01G451200 chr1D 90.698 43 2 2 939 980 131882498 131882457 5.410000e-04 56.5
18 TraesCS2A01G451200 chr1D 100.000 29 0 0 949 977 210347537 210347565 2.000000e-03 54.7
19 TraesCS2A01G451200 chr5D 94.444 36 1 1 949 984 129981672 129981638 2.000000e-03 54.7
20 TraesCS2A01G451200 chr1B 100.000 29 0 0 949 977 481469094 481469122 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G451200 chr2A 700670474 700674347 3873 True 3261.5 5906 100.0000 1 3874 2 chr2A.!!$R1 3873
1 TraesCS2A01G451200 chr2D 560863110 560866296 3186 True 3795.0 3795 88.4130 677 3874 1 chr2D.!!$R1 3197
2 TraesCS2A01G451200 chr2B 669190743 669193706 2963 False 1836.0 3426 88.5780 677 3816 2 chr2B.!!$F2 3139
3 TraesCS2A01G451200 chr7D 621159018 621160437 1419 False 1044.0 1044 80.2330 1494 2938 1 chr7D.!!$F1 1444
4 TraesCS2A01G451200 chr7D 621202792 621204763 1971 False 588.0 865 80.4950 1091 2938 2 chr7D.!!$F2 1847
5 TraesCS2A01G451200 chr7A 715780958 715785589 4631 True 665.5 935 82.1585 1115 2938 2 chr7A.!!$R1 1823
6 TraesCS2A01G451200 chr7A 715924401 715925917 1516 True 549.0 828 80.3640 1092 2764 2 chr7A.!!$R2 1672
7 TraesCS2A01G451200 chr7B 717224975 717226130 1155 True 680.0 680 77.7960 1553 2717 1 chr7B.!!$R2 1164
8 TraesCS2A01G451200 chr7B 717149503 717150658 1155 True 664.0 664 77.6010 1553 2717 1 chr7B.!!$R1 1164

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
778 783 0.032813 ATTCCGAGTTCCCTACCGGA 60.033 55.0 9.46 0.0 43.33 5.14 F
1067 1077 0.399454 CCGGCAGAAGATCCATCCAT 59.601 55.0 0.00 0.0 0.00 3.41 F
2151 2367 0.319728 TGCACTTCTCTGCTGGACTC 59.680 55.0 0.00 0.0 38.07 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2088 2300 0.606673 GGTGAGGGCAGTGAGTTTCC 60.607 60.000 0.0 0.0 0.00 3.13 R
2568 5626 2.475466 CCCGCACATGGTCAGATGC 61.475 63.158 0.0 0.0 34.66 3.91 R
3208 6295 0.535553 GGACGCCACACAAACCCTTA 60.536 55.000 0.0 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.887621 CTTTGAGTATTGTCCGGGAGA 57.112 47.619 0.00 0.00 0.00 3.71
21 22 4.202245 CTTTGAGTATTGTCCGGGAGAA 57.798 45.455 9.25 9.25 0.00 2.87
22 23 3.887621 TTGAGTATTGTCCGGGAGAAG 57.112 47.619 12.50 0.00 0.00 2.85
23 24 1.480954 TGAGTATTGTCCGGGAGAAGC 59.519 52.381 12.50 7.77 0.00 3.86
24 25 1.757699 GAGTATTGTCCGGGAGAAGCT 59.242 52.381 12.50 12.05 0.00 3.74
25 26 2.957006 GAGTATTGTCCGGGAGAAGCTA 59.043 50.000 12.50 0.00 0.00 3.32
26 27 3.371965 AGTATTGTCCGGGAGAAGCTAA 58.628 45.455 12.50 0.00 0.00 3.09
27 28 3.967987 AGTATTGTCCGGGAGAAGCTAAT 59.032 43.478 12.50 0.00 0.00 1.73
28 29 2.691409 TTGTCCGGGAGAAGCTAATG 57.309 50.000 0.00 0.00 0.00 1.90
29 30 1.568504 TGTCCGGGAGAAGCTAATGT 58.431 50.000 0.00 0.00 0.00 2.71
30 31 1.906574 TGTCCGGGAGAAGCTAATGTT 59.093 47.619 0.00 0.00 0.00 2.71
31 32 2.280628 GTCCGGGAGAAGCTAATGTTG 58.719 52.381 0.00 0.00 0.00 3.33
32 33 1.906574 TCCGGGAGAAGCTAATGTTGT 59.093 47.619 0.00 0.00 0.00 3.32
33 34 2.304761 TCCGGGAGAAGCTAATGTTGTT 59.695 45.455 0.00 0.00 0.00 2.83
34 35 2.420022 CCGGGAGAAGCTAATGTTGTTG 59.580 50.000 0.00 0.00 0.00 3.33
35 36 2.159517 CGGGAGAAGCTAATGTTGTTGC 60.160 50.000 0.00 0.00 0.00 4.17
36 37 2.819608 GGGAGAAGCTAATGTTGTTGCA 59.180 45.455 0.00 0.00 0.00 4.08
37 38 3.366374 GGGAGAAGCTAATGTTGTTGCAC 60.366 47.826 0.00 0.00 0.00 4.57
38 39 3.253188 GGAGAAGCTAATGTTGTTGCACA 59.747 43.478 0.00 0.00 0.00 4.57
39 40 4.082571 GGAGAAGCTAATGTTGTTGCACAT 60.083 41.667 0.00 0.00 39.17 3.21
40 41 4.801891 AGAAGCTAATGTTGTTGCACATG 58.198 39.130 0.00 0.00 37.46 3.21
41 42 4.520111 AGAAGCTAATGTTGTTGCACATGA 59.480 37.500 0.00 0.00 37.46 3.07
42 43 4.852134 AGCTAATGTTGTTGCACATGAA 57.148 36.364 0.00 0.00 37.46 2.57
43 44 5.395682 AGCTAATGTTGTTGCACATGAAT 57.604 34.783 0.00 0.00 37.46 2.57
44 45 5.786311 AGCTAATGTTGTTGCACATGAATT 58.214 33.333 0.00 0.00 37.46 2.17
45 46 6.923012 AGCTAATGTTGTTGCACATGAATTA 58.077 32.000 0.00 0.00 37.46 1.40
46 47 7.377398 AGCTAATGTTGTTGCACATGAATTAA 58.623 30.769 0.00 0.00 37.46 1.40
47 48 7.329226 AGCTAATGTTGTTGCACATGAATTAAC 59.671 33.333 0.00 0.00 37.46 2.01
48 49 6.783892 AATGTTGTTGCACATGAATTAACC 57.216 33.333 0.00 0.00 37.46 2.85
49 50 5.268118 TGTTGTTGCACATGAATTAACCA 57.732 34.783 0.00 0.00 0.00 3.67
50 51 5.664457 TGTTGTTGCACATGAATTAACCAA 58.336 33.333 0.00 0.00 0.00 3.67
51 52 6.108687 TGTTGTTGCACATGAATTAACCAAA 58.891 32.000 0.00 0.00 0.00 3.28
52 53 6.765036 TGTTGTTGCACATGAATTAACCAAAT 59.235 30.769 0.00 0.00 0.00 2.32
53 54 7.928167 TGTTGTTGCACATGAATTAACCAAATA 59.072 29.630 0.00 0.00 0.00 1.40
54 55 8.434661 GTTGTTGCACATGAATTAACCAAATAG 58.565 33.333 0.00 0.00 0.00 1.73
55 56 6.589523 TGTTGCACATGAATTAACCAAATAGC 59.410 34.615 0.00 0.00 0.00 2.97
56 57 6.528537 TGCACATGAATTAACCAAATAGCT 57.471 33.333 0.00 0.00 0.00 3.32
57 58 7.637631 TGCACATGAATTAACCAAATAGCTA 57.362 32.000 0.00 0.00 0.00 3.32
58 59 7.479980 TGCACATGAATTAACCAAATAGCTAC 58.520 34.615 0.00 0.00 0.00 3.58
59 60 6.632834 GCACATGAATTAACCAAATAGCTACG 59.367 38.462 0.00 0.00 0.00 3.51
60 61 7.678690 GCACATGAATTAACCAAATAGCTACGT 60.679 37.037 0.00 0.00 0.00 3.57
61 62 8.822855 CACATGAATTAACCAAATAGCTACGTA 58.177 33.333 0.00 0.00 0.00 3.57
62 63 9.555727 ACATGAATTAACCAAATAGCTACGTAT 57.444 29.630 0.00 0.00 0.00 3.06
64 65 9.998106 ATGAATTAACCAAATAGCTACGTATCT 57.002 29.630 4.13 4.13 0.00 1.98
65 66 9.826574 TGAATTAACCAAATAGCTACGTATCTT 57.173 29.630 3.98 0.00 0.00 2.40
67 68 7.919313 TTAACCAAATAGCTACGTATCTTCG 57.081 36.000 3.98 0.00 0.00 3.79
68 69 5.511234 ACCAAATAGCTACGTATCTTCGT 57.489 39.130 3.98 0.00 45.97 3.85
69 70 5.899299 ACCAAATAGCTACGTATCTTCGTT 58.101 37.500 3.98 0.00 43.80 3.85
70 71 6.335777 ACCAAATAGCTACGTATCTTCGTTT 58.664 36.000 3.98 2.12 43.80 3.60
71 72 6.815142 ACCAAATAGCTACGTATCTTCGTTTT 59.185 34.615 3.98 0.00 43.80 2.43
72 73 7.117454 CCAAATAGCTACGTATCTTCGTTTTG 58.883 38.462 3.98 9.50 43.80 2.44
73 74 7.201496 CCAAATAGCTACGTATCTTCGTTTTGT 60.201 37.037 3.98 0.00 43.80 2.83
74 75 8.800972 CAAATAGCTACGTATCTTCGTTTTGTA 58.199 33.333 3.98 0.00 43.80 2.41
75 76 8.915871 AATAGCTACGTATCTTCGTTTTGTAA 57.084 30.769 3.98 0.00 43.80 2.41
76 77 9.525409 AATAGCTACGTATCTTCGTTTTGTAAT 57.475 29.630 3.98 0.00 43.80 1.89
77 78 7.218145 AGCTACGTATCTTCGTTTTGTAATG 57.782 36.000 0.00 0.00 43.80 1.90
78 79 7.031372 AGCTACGTATCTTCGTTTTGTAATGA 58.969 34.615 0.00 0.00 43.80 2.57
79 80 7.220300 AGCTACGTATCTTCGTTTTGTAATGAG 59.780 37.037 0.00 0.00 43.80 2.90
80 81 7.008992 GCTACGTATCTTCGTTTTGTAATGAGT 59.991 37.037 0.00 0.00 43.80 3.41
81 82 7.045725 ACGTATCTTCGTTTTGTAATGAGTG 57.954 36.000 0.00 0.00 41.37 3.51
82 83 6.090358 ACGTATCTTCGTTTTGTAATGAGTGG 59.910 38.462 0.00 0.00 41.37 4.00
83 84 5.880054 ATCTTCGTTTTGTAATGAGTGGG 57.120 39.130 0.00 0.00 31.23 4.61
84 85 3.500680 TCTTCGTTTTGTAATGAGTGGGC 59.499 43.478 0.00 0.00 31.23 5.36
85 86 3.134574 TCGTTTTGTAATGAGTGGGCT 57.865 42.857 0.00 0.00 0.00 5.19
86 87 2.811431 TCGTTTTGTAATGAGTGGGCTG 59.189 45.455 0.00 0.00 0.00 4.85
87 88 2.811431 CGTTTTGTAATGAGTGGGCTGA 59.189 45.455 0.00 0.00 0.00 4.26
88 89 3.252215 CGTTTTGTAATGAGTGGGCTGAA 59.748 43.478 0.00 0.00 0.00 3.02
89 90 4.613622 CGTTTTGTAATGAGTGGGCTGAAG 60.614 45.833 0.00 0.00 0.00 3.02
90 91 4.365514 TTTGTAATGAGTGGGCTGAAGA 57.634 40.909 0.00 0.00 0.00 2.87
91 92 4.574674 TTGTAATGAGTGGGCTGAAGAT 57.425 40.909 0.00 0.00 0.00 2.40
92 93 3.877559 TGTAATGAGTGGGCTGAAGATG 58.122 45.455 0.00 0.00 0.00 2.90
93 94 3.519107 TGTAATGAGTGGGCTGAAGATGA 59.481 43.478 0.00 0.00 0.00 2.92
94 95 3.947612 AATGAGTGGGCTGAAGATGAT 57.052 42.857 0.00 0.00 0.00 2.45
95 96 2.996249 TGAGTGGGCTGAAGATGATC 57.004 50.000 0.00 0.00 0.00 2.92
96 97 1.487976 TGAGTGGGCTGAAGATGATCC 59.512 52.381 0.00 0.00 0.00 3.36
97 98 1.767681 GAGTGGGCTGAAGATGATCCT 59.232 52.381 0.00 0.00 0.00 3.24
98 99 2.172293 GAGTGGGCTGAAGATGATCCTT 59.828 50.000 0.00 0.00 0.00 3.36
99 100 3.387962 AGTGGGCTGAAGATGATCCTTA 58.612 45.455 0.00 0.00 0.00 2.69
100 101 3.979347 AGTGGGCTGAAGATGATCCTTAT 59.021 43.478 0.00 0.00 0.00 1.73
101 102 4.070716 GTGGGCTGAAGATGATCCTTATG 58.929 47.826 0.00 0.00 0.00 1.90
102 103 3.975982 TGGGCTGAAGATGATCCTTATGA 59.024 43.478 0.00 0.00 0.00 2.15
103 104 4.041321 TGGGCTGAAGATGATCCTTATGAG 59.959 45.833 0.00 0.00 0.00 2.90
104 105 4.002316 GGCTGAAGATGATCCTTATGAGC 58.998 47.826 0.00 0.00 0.00 4.26
105 106 4.262981 GGCTGAAGATGATCCTTATGAGCT 60.263 45.833 0.00 0.00 0.00 4.09
106 107 5.046735 GGCTGAAGATGATCCTTATGAGCTA 60.047 44.000 0.00 0.00 0.00 3.32
107 108 5.868801 GCTGAAGATGATCCTTATGAGCTAC 59.131 44.000 0.00 0.00 0.00 3.58
108 109 6.295236 GCTGAAGATGATCCTTATGAGCTACT 60.295 42.308 0.00 0.00 0.00 2.57
109 110 7.609097 TGAAGATGATCCTTATGAGCTACTT 57.391 36.000 0.00 0.00 31.93 2.24
110 111 8.027524 TGAAGATGATCCTTATGAGCTACTTT 57.972 34.615 0.00 0.00 30.44 2.66
111 112 8.147058 TGAAGATGATCCTTATGAGCTACTTTC 58.853 37.037 0.00 0.00 30.44 2.62
112 113 7.854166 AGATGATCCTTATGAGCTACTTTCT 57.146 36.000 0.00 0.00 0.00 2.52
113 114 7.895759 AGATGATCCTTATGAGCTACTTTCTC 58.104 38.462 0.00 0.00 0.00 2.87
114 115 7.729881 AGATGATCCTTATGAGCTACTTTCTCT 59.270 37.037 0.00 0.00 0.00 3.10
115 116 8.948401 ATGATCCTTATGAGCTACTTTCTCTA 57.052 34.615 0.00 0.00 0.00 2.43
116 117 8.948401 TGATCCTTATGAGCTACTTTCTCTAT 57.052 34.615 0.00 0.00 0.00 1.98
117 118 9.373450 TGATCCTTATGAGCTACTTTCTCTATT 57.627 33.333 0.00 0.00 0.00 1.73
118 119 9.638239 GATCCTTATGAGCTACTTTCTCTATTG 57.362 37.037 0.00 0.00 0.00 1.90
119 120 8.768501 TCCTTATGAGCTACTTTCTCTATTGA 57.231 34.615 0.00 0.00 0.00 2.57
120 121 9.373450 TCCTTATGAGCTACTTTCTCTATTGAT 57.627 33.333 0.00 0.00 0.00 2.57
121 122 9.638239 CCTTATGAGCTACTTTCTCTATTGATC 57.362 37.037 0.00 0.00 0.00 2.92
138 139 9.851686 TCTATTGATCAAATATGTAAACCTGCT 57.148 29.630 13.09 0.00 30.26 4.24
142 143 9.461312 TTGATCAAATATGTAAACCTGCTTACT 57.539 29.630 5.45 0.00 33.67 2.24
143 144 8.892723 TGATCAAATATGTAAACCTGCTTACTG 58.107 33.333 0.00 0.00 33.67 2.74
144 145 7.083875 TCAAATATGTAAACCTGCTTACTGC 57.916 36.000 0.00 0.00 43.25 4.40
145 146 6.884295 TCAAATATGTAAACCTGCTTACTGCT 59.116 34.615 0.00 0.00 43.37 4.24
146 147 6.927294 AATATGTAAACCTGCTTACTGCTC 57.073 37.500 0.00 0.00 43.37 4.26
147 148 3.053831 TGTAAACCTGCTTACTGCTCC 57.946 47.619 0.00 0.00 43.37 4.70
148 149 2.290071 TGTAAACCTGCTTACTGCTCCC 60.290 50.000 0.00 0.00 43.37 4.30
149 150 1.068121 AAACCTGCTTACTGCTCCCT 58.932 50.000 0.00 0.00 43.37 4.20
150 151 0.615850 AACCTGCTTACTGCTCCCTC 59.384 55.000 0.00 0.00 43.37 4.30
151 152 1.268283 ACCTGCTTACTGCTCCCTCC 61.268 60.000 0.00 0.00 43.37 4.30
152 153 1.142748 CTGCTTACTGCTCCCTCCG 59.857 63.158 0.00 0.00 43.37 4.63
153 154 2.202946 GCTTACTGCTCCCTCCGC 60.203 66.667 0.00 0.00 38.95 5.54
154 155 3.019003 GCTTACTGCTCCCTCCGCA 62.019 63.158 0.00 0.00 38.95 5.69
155 156 1.153549 CTTACTGCTCCCTCCGCAC 60.154 63.158 0.00 0.00 33.19 5.34
156 157 2.579684 CTTACTGCTCCCTCCGCACC 62.580 65.000 0.00 0.00 33.19 5.01
157 158 3.897681 TACTGCTCCCTCCGCACCA 62.898 63.158 0.00 0.00 33.19 4.17
158 159 3.790437 CTGCTCCCTCCGCACCAT 61.790 66.667 0.00 0.00 33.19 3.55
159 160 2.364973 TGCTCCCTCCGCACCATA 60.365 61.111 0.00 0.00 31.40 2.74
160 161 1.971505 CTGCTCCCTCCGCACCATAA 61.972 60.000 0.00 0.00 33.19 1.90
161 162 1.344953 TGCTCCCTCCGCACCATAAT 61.345 55.000 0.00 0.00 31.40 1.28
162 163 0.685097 GCTCCCTCCGCACCATAATA 59.315 55.000 0.00 0.00 0.00 0.98
163 164 1.279271 GCTCCCTCCGCACCATAATAT 59.721 52.381 0.00 0.00 0.00 1.28
164 165 2.500098 GCTCCCTCCGCACCATAATATA 59.500 50.000 0.00 0.00 0.00 0.86
165 166 3.055385 GCTCCCTCCGCACCATAATATAA 60.055 47.826 0.00 0.00 0.00 0.98
166 167 4.759782 CTCCCTCCGCACCATAATATAAG 58.240 47.826 0.00 0.00 0.00 1.73
167 168 4.422057 TCCCTCCGCACCATAATATAAGA 58.578 43.478 0.00 0.00 0.00 2.10
168 169 4.222145 TCCCTCCGCACCATAATATAAGAC 59.778 45.833 0.00 0.00 0.00 3.01
169 170 4.174009 CCTCCGCACCATAATATAAGACG 58.826 47.826 0.00 0.00 0.00 4.18
170 171 4.321750 CCTCCGCACCATAATATAAGACGT 60.322 45.833 0.00 0.00 0.00 4.34
171 172 5.204409 TCCGCACCATAATATAAGACGTT 57.796 39.130 0.00 0.00 0.00 3.99
172 173 6.330004 TCCGCACCATAATATAAGACGTTA 57.670 37.500 0.00 0.00 0.00 3.18
173 174 6.927416 TCCGCACCATAATATAAGACGTTAT 58.073 36.000 0.00 0.00 33.25 1.89
174 175 7.380536 TCCGCACCATAATATAAGACGTTATT 58.619 34.615 0.00 0.00 31.04 1.40
175 176 7.329962 TCCGCACCATAATATAAGACGTTATTG 59.670 37.037 0.00 0.00 31.04 1.90
176 177 6.953743 CGCACCATAATATAAGACGTTATTGC 59.046 38.462 0.00 0.00 31.04 3.56
177 178 7.359681 CGCACCATAATATAAGACGTTATTGCA 60.360 37.037 0.00 0.00 31.04 4.08
178 179 8.450964 GCACCATAATATAAGACGTTATTGCAT 58.549 33.333 0.00 0.00 31.04 3.96
187 188 6.393720 AAGACGTTATTGCATTTGAAATGC 57.606 33.333 30.21 30.21 44.76 3.56
198 199 6.012962 GCATTTGAAATGCAATAACGTCTC 57.987 37.500 31.42 3.48 44.00 3.36
199 200 5.275418 GCATTTGAAATGCAATAACGTCTCG 60.275 40.000 31.42 0.00 44.00 4.04
200 201 5.351233 TTTGAAATGCAATAACGTCTCGT 57.649 34.783 0.00 0.00 37.84 4.18
201 202 6.469139 TTTGAAATGCAATAACGTCTCGTA 57.531 33.333 0.00 0.00 36.13 3.43
202 203 6.656314 TTGAAATGCAATAACGTCTCGTAT 57.344 33.333 0.00 0.00 39.99 3.06
203 204 6.656314 TGAAATGCAATAACGTCTCGTATT 57.344 33.333 0.00 0.00 39.99 1.89
204 205 7.758613 TGAAATGCAATAACGTCTCGTATTA 57.241 32.000 0.00 0.00 39.99 0.98
205 206 7.837505 TGAAATGCAATAACGTCTCGTATTAG 58.162 34.615 0.00 0.00 39.99 1.73
206 207 6.764877 AATGCAATAACGTCTCGTATTAGG 57.235 37.500 0.00 0.00 39.99 2.69
207 208 4.046462 TGCAATAACGTCTCGTATTAGGC 58.954 43.478 0.00 0.00 39.99 3.93
208 209 4.202080 TGCAATAACGTCTCGTATTAGGCT 60.202 41.667 0.00 0.00 39.99 4.58
209 210 5.008911 TGCAATAACGTCTCGTATTAGGCTA 59.991 40.000 0.00 0.00 39.99 3.93
210 211 6.091437 GCAATAACGTCTCGTATTAGGCTAT 58.909 40.000 0.00 0.00 39.99 2.97
211 212 6.033619 GCAATAACGTCTCGTATTAGGCTATG 59.966 42.308 0.00 0.00 39.99 2.23
212 213 4.500603 AACGTCTCGTATTAGGCTATGG 57.499 45.455 0.00 0.00 39.99 2.74
213 214 3.748083 ACGTCTCGTATTAGGCTATGGA 58.252 45.455 0.00 0.00 38.73 3.41
214 215 3.752222 ACGTCTCGTATTAGGCTATGGAG 59.248 47.826 0.00 0.52 38.73 3.86
215 216 3.127203 CGTCTCGTATTAGGCTATGGAGG 59.873 52.174 0.00 0.00 0.00 4.30
216 217 4.080687 GTCTCGTATTAGGCTATGGAGGT 58.919 47.826 0.00 0.00 0.00 3.85
217 218 5.251764 GTCTCGTATTAGGCTATGGAGGTA 58.748 45.833 0.00 0.00 0.00 3.08
218 219 5.354792 GTCTCGTATTAGGCTATGGAGGTAG 59.645 48.000 0.00 0.00 0.00 3.18
219 220 5.013913 TCTCGTATTAGGCTATGGAGGTAGT 59.986 44.000 0.00 0.00 0.00 2.73
220 221 5.638133 TCGTATTAGGCTATGGAGGTAGTT 58.362 41.667 0.00 0.00 0.00 2.24
221 222 6.782986 TCGTATTAGGCTATGGAGGTAGTTA 58.217 40.000 0.00 0.00 0.00 2.24
222 223 7.233632 TCGTATTAGGCTATGGAGGTAGTTAA 58.766 38.462 0.00 0.00 0.00 2.01
223 224 7.892241 TCGTATTAGGCTATGGAGGTAGTTAAT 59.108 37.037 0.00 0.00 0.00 1.40
224 225 9.182214 CGTATTAGGCTATGGAGGTAGTTAATA 57.818 37.037 0.00 0.00 0.00 0.98
228 229 9.664777 TTAGGCTATGGAGGTAGTTAATAAAGA 57.335 33.333 0.00 0.00 0.00 2.52
229 230 8.196378 AGGCTATGGAGGTAGTTAATAAAGAG 57.804 38.462 0.00 0.00 0.00 2.85
230 231 7.235812 AGGCTATGGAGGTAGTTAATAAAGAGG 59.764 40.741 0.00 0.00 0.00 3.69
231 232 7.234988 GGCTATGGAGGTAGTTAATAAAGAGGA 59.765 40.741 0.00 0.00 0.00 3.71
232 233 8.648693 GCTATGGAGGTAGTTAATAAAGAGGAA 58.351 37.037 0.00 0.00 0.00 3.36
234 235 8.625467 ATGGAGGTAGTTAATAAAGAGGAAGT 57.375 34.615 0.00 0.00 0.00 3.01
235 236 9.725206 ATGGAGGTAGTTAATAAAGAGGAAGTA 57.275 33.333 0.00 0.00 0.00 2.24
236 237 9.551339 TGGAGGTAGTTAATAAAGAGGAAGTAA 57.449 33.333 0.00 0.00 0.00 2.24
262 263 8.159344 AGTTATAAGAAAATGATACTGCTGGC 57.841 34.615 0.00 0.00 0.00 4.85
263 264 7.775093 AGTTATAAGAAAATGATACTGCTGGCA 59.225 33.333 0.00 0.00 0.00 4.92
274 275 2.806608 CTGCTGGCAGTTCACAATTT 57.193 45.000 17.16 0.00 39.10 1.82
275 276 3.102052 CTGCTGGCAGTTCACAATTTT 57.898 42.857 17.16 0.00 39.10 1.82
276 277 3.054878 CTGCTGGCAGTTCACAATTTTC 58.945 45.455 17.16 0.00 39.10 2.29
277 278 2.694628 TGCTGGCAGTTCACAATTTTCT 59.305 40.909 17.16 0.00 0.00 2.52
278 279 3.888323 TGCTGGCAGTTCACAATTTTCTA 59.112 39.130 17.16 0.00 0.00 2.10
279 280 4.022935 TGCTGGCAGTTCACAATTTTCTAG 60.023 41.667 17.16 0.00 0.00 2.43
280 281 4.216257 GCTGGCAGTTCACAATTTTCTAGA 59.784 41.667 17.16 0.00 0.00 2.43
281 282 5.618640 GCTGGCAGTTCACAATTTTCTAGAG 60.619 44.000 17.16 0.00 0.00 2.43
282 283 5.620206 TGGCAGTTCACAATTTTCTAGAGA 58.380 37.500 0.00 0.00 0.00 3.10
283 284 6.061441 TGGCAGTTCACAATTTTCTAGAGAA 58.939 36.000 0.00 0.00 0.00 2.87
284 285 6.205464 TGGCAGTTCACAATTTTCTAGAGAAG 59.795 38.462 1.86 0.00 35.21 2.85
285 286 6.348868 GGCAGTTCACAATTTTCTAGAGAAGG 60.349 42.308 1.86 0.00 35.21 3.46
286 287 6.606768 CAGTTCACAATTTTCTAGAGAAGGC 58.393 40.000 1.86 0.00 35.21 4.35
287 288 6.205464 CAGTTCACAATTTTCTAGAGAAGGCA 59.795 38.462 1.86 0.00 35.21 4.75
288 289 6.772716 AGTTCACAATTTTCTAGAGAAGGCAA 59.227 34.615 1.86 0.00 35.21 4.52
289 290 6.560253 TCACAATTTTCTAGAGAAGGCAAC 57.440 37.500 1.86 0.00 35.21 4.17
290 291 6.061441 TCACAATTTTCTAGAGAAGGCAACA 58.939 36.000 1.86 0.00 41.41 3.33
291 292 6.716628 TCACAATTTTCTAGAGAAGGCAACAT 59.283 34.615 1.86 0.00 41.41 2.71
292 293 7.231317 TCACAATTTTCTAGAGAAGGCAACATT 59.769 33.333 1.86 0.00 41.41 2.71
293 294 7.869429 CACAATTTTCTAGAGAAGGCAACATTT 59.131 33.333 1.86 0.00 41.41 2.32
294 295 8.084684 ACAATTTTCTAGAGAAGGCAACATTTC 58.915 33.333 1.86 0.00 41.41 2.17
295 296 8.302438 CAATTTTCTAGAGAAGGCAACATTTCT 58.698 33.333 1.86 0.00 41.41 2.52
296 297 7.823745 TTTTCTAGAGAAGGCAACATTTCTT 57.176 32.000 0.00 0.00 41.41 2.52
297 298 8.918202 TTTTCTAGAGAAGGCAACATTTCTTA 57.082 30.769 0.00 0.00 41.41 2.10
298 299 8.553459 TTTCTAGAGAAGGCAACATTTCTTAG 57.447 34.615 0.00 0.00 41.41 2.18
299 300 6.644347 TCTAGAGAAGGCAACATTTCTTAGG 58.356 40.000 0.00 0.00 41.41 2.69
300 301 4.013050 AGAGAAGGCAACATTTCTTAGGC 58.987 43.478 0.00 0.00 41.41 3.93
301 302 3.758554 GAGAAGGCAACATTTCTTAGGCA 59.241 43.478 0.00 0.00 41.41 4.75
302 303 4.347607 AGAAGGCAACATTTCTTAGGCAT 58.652 39.130 0.00 0.00 41.41 4.40
303 304 4.774200 AGAAGGCAACATTTCTTAGGCATT 59.226 37.500 0.00 0.00 41.41 3.56
304 305 5.246883 AGAAGGCAACATTTCTTAGGCATTT 59.753 36.000 0.00 0.00 41.41 2.32
305 306 6.437162 AGAAGGCAACATTTCTTAGGCATTTA 59.563 34.615 0.00 0.00 41.41 1.40
306 307 6.212888 AGGCAACATTTCTTAGGCATTTAG 57.787 37.500 0.00 0.00 41.41 1.85
307 308 5.951747 AGGCAACATTTCTTAGGCATTTAGA 59.048 36.000 0.00 0.00 41.41 2.10
308 309 6.096001 AGGCAACATTTCTTAGGCATTTAGAG 59.904 38.462 0.00 0.00 41.41 2.43
309 310 6.095440 GGCAACATTTCTTAGGCATTTAGAGA 59.905 38.462 0.00 0.00 0.00 3.10
310 311 7.362920 GGCAACATTTCTTAGGCATTTAGAGAA 60.363 37.037 0.00 0.00 0.00 2.87
311 312 7.699812 GCAACATTTCTTAGGCATTTAGAGAAG 59.300 37.037 0.00 0.00 0.00 2.85
312 313 8.734386 CAACATTTCTTAGGCATTTAGAGAAGT 58.266 33.333 0.00 0.00 0.00 3.01
313 314 8.870075 ACATTTCTTAGGCATTTAGAGAAGTT 57.130 30.769 0.00 0.00 0.00 2.66
314 315 9.959721 ACATTTCTTAGGCATTTAGAGAAGTTA 57.040 29.630 0.00 0.00 0.00 2.24
317 318 9.787435 TTTCTTAGGCATTTAGAGAAGTTAACA 57.213 29.630 8.61 0.00 0.00 2.41
318 319 9.787435 TTCTTAGGCATTTAGAGAAGTTAACAA 57.213 29.630 8.61 0.00 0.00 2.83
319 320 9.787435 TCTTAGGCATTTAGAGAAGTTAACAAA 57.213 29.630 8.61 0.00 0.00 2.83
323 324 8.860088 AGGCATTTAGAGAAGTTAACAAATTGT 58.140 29.630 8.61 0.00 0.00 2.71
324 325 9.476202 GGCATTTAGAGAAGTTAACAAATTGTT 57.524 29.630 16.05 16.05 43.88 2.83
772 777 0.905357 CAGTCCATTCCGAGTTCCCT 59.095 55.000 0.00 0.00 0.00 4.20
773 778 2.108168 CAGTCCATTCCGAGTTCCCTA 58.892 52.381 0.00 0.00 0.00 3.53
774 779 2.108970 AGTCCATTCCGAGTTCCCTAC 58.891 52.381 0.00 0.00 0.00 3.18
776 781 0.104304 CCATTCCGAGTTCCCTACCG 59.896 60.000 0.00 0.00 0.00 4.02
777 782 0.104304 CATTCCGAGTTCCCTACCGG 59.896 60.000 0.00 0.00 40.08 5.28
778 783 0.032813 ATTCCGAGTTCCCTACCGGA 60.033 55.000 9.46 0.00 43.33 5.14
895 900 4.715523 CCGCTCCGGCCCTTTCAA 62.716 66.667 0.00 0.00 41.17 2.69
903 908 0.535102 CGGCCCTTTCAACAGTCACT 60.535 55.000 0.00 0.00 0.00 3.41
982 992 2.563427 CGAGCGAGTGAGTGCAGA 59.437 61.111 0.00 0.00 0.00 4.26
1067 1077 0.399454 CCGGCAGAAGATCCATCCAT 59.601 55.000 0.00 0.00 0.00 3.41
1073 1083 4.150359 GCAGAAGATCCATCCATCCATTT 58.850 43.478 0.00 0.00 0.00 2.32
1076 1086 3.430042 AGATCCATCCATCCATTTCGG 57.570 47.619 0.00 0.00 0.00 4.30
1077 1087 1.815003 GATCCATCCATCCATTTCGGC 59.185 52.381 0.00 0.00 33.14 5.54
1078 1088 0.534877 TCCATCCATCCATTTCGGCG 60.535 55.000 0.00 0.00 33.14 6.46
1079 1089 1.283793 CATCCATCCATTTCGGCGC 59.716 57.895 0.00 0.00 33.14 6.53
1258 1268 2.829384 GCCTTCCTCCACCACCACA 61.829 63.158 0.00 0.00 0.00 4.17
1320 1330 3.624300 CTCGAGCTGCGCCAATCG 61.624 66.667 16.26 16.26 40.61 3.34
1626 1802 4.477975 GTCGTCCGCCTCCACTCG 62.478 72.222 0.00 0.00 0.00 4.18
1854 2048 2.654877 GGCGGTTTCCTCTCGTCA 59.345 61.111 0.00 0.00 0.00 4.35
1866 2060 2.486203 CCTCTCGTCATTCTATCTCCCG 59.514 54.545 0.00 0.00 0.00 5.14
1871 2065 2.030717 CGTCATTCTATCTCCCGGACAG 60.031 54.545 0.73 0.00 0.00 3.51
1950 2144 2.859165 TCTGCCAAAAGGTCTACTGG 57.141 50.000 0.00 0.00 0.00 4.00
1979 2174 7.510549 TGGAAGAATTCTTGTCGATTTTTCT 57.489 32.000 25.12 0.00 46.56 2.52
1980 2175 7.940850 TGGAAGAATTCTTGTCGATTTTTCTT 58.059 30.769 25.12 0.00 46.56 2.52
1981 2176 8.076178 TGGAAGAATTCTTGTCGATTTTTCTTC 58.924 33.333 25.12 18.07 46.56 2.87
1982 2177 8.076178 GGAAGAATTCTTGTCGATTTTTCTTCA 58.924 33.333 25.12 2.61 46.56 3.02
1983 2178 9.111702 GAAGAATTCTTGTCGATTTTTCTTCAG 57.888 33.333 25.12 0.00 43.23 3.02
1984 2179 8.383318 AGAATTCTTGTCGATTTTTCTTCAGA 57.617 30.769 0.88 0.00 0.00 3.27
1985 2180 8.502387 AGAATTCTTGTCGATTTTTCTTCAGAG 58.498 33.333 0.88 0.00 0.00 3.35
2063 2275 2.162408 GCACTTTATCAGGTGTTCAGCC 59.838 50.000 0.00 0.00 36.03 4.85
2088 2300 1.075542 TTCGAAAGCCGTGTATGCTG 58.924 50.000 0.00 0.00 39.48 4.41
2151 2367 0.319728 TGCACTTCTCTGCTGGACTC 59.680 55.000 0.00 0.00 38.07 3.36
2158 2374 1.345741 TCTCTGCTGGACTCTGGTTTG 59.654 52.381 0.00 0.00 0.00 2.93
2199 2415 6.385649 TCATGGACTGTTTTGTTAACCTTC 57.614 37.500 2.48 0.00 0.00 3.46
2418 2641 5.868454 GGTCTTACACCCTTTACACCTTTA 58.132 41.667 0.00 0.00 39.69 1.85
2425 2648 4.760204 CACCCTTTACACCTTTAACTCCAG 59.240 45.833 0.00 0.00 0.00 3.86
2447 2672 6.310197 CAGCTTAAGTTGATTTGCTCAGTAC 58.690 40.000 13.61 0.00 34.68 2.73
2490 5547 2.803451 TGGCATCGTTGTTGTGTTTTC 58.197 42.857 0.00 0.00 0.00 2.29
2495 5552 5.189625 GCATCGTTGTTGTGTTTTCATTTG 58.810 37.500 0.00 0.00 0.00 2.32
2568 5626 2.362889 GTGGGCCCTTGGTGGATG 60.363 66.667 25.70 0.00 38.35 3.51
2583 5641 0.666913 GGATGCATCTGACCATGTGC 59.333 55.000 25.28 1.70 38.05 4.57
2690 5754 4.799564 AGTGTGCTTTTTGTTGAGGAAA 57.200 36.364 0.00 0.00 0.00 3.13
2711 5775 5.948742 AAGCTAGCTCTCTCCATAAACTT 57.051 39.130 19.65 0.00 0.00 2.66
2717 5781 7.446013 GCTAGCTCTCTCCATAAACTTCTACTA 59.554 40.741 7.70 0.00 0.00 1.82
2795 5859 0.106769 TTGTTGGAGAAGCTGTGGCA 60.107 50.000 0.00 0.00 41.70 4.92
2895 5961 3.500448 TGCCAGTCACAAGTCCAATTA 57.500 42.857 0.00 0.00 0.00 1.40
2896 5962 4.032960 TGCCAGTCACAAGTCCAATTAT 57.967 40.909 0.00 0.00 0.00 1.28
2949 6015 0.313043 CTGCCTTTTGACTGCTGTGG 59.687 55.000 0.00 0.00 0.00 4.17
2962 6028 2.368439 TGCTGTGGCATGTTAAGGATC 58.632 47.619 0.00 0.00 44.28 3.36
3003 6070 2.355010 AGGCTATCAATGAGGCAACC 57.645 50.000 11.73 0.00 41.80 3.77
3013 6080 0.681887 TGAGGCAACCCATCATGCTG 60.682 55.000 0.00 0.00 42.20 4.41
3103 6176 2.200373 TAAAACTCAAGCCTGCCCTC 57.800 50.000 0.00 0.00 0.00 4.30
3105 6178 1.768684 AAACTCAAGCCTGCCCTCGA 61.769 55.000 0.00 0.00 0.00 4.04
3107 6180 2.604686 TCAAGCCTGCCCTCGAGT 60.605 61.111 12.31 0.00 0.00 4.18
3108 6181 2.125350 CAAGCCTGCCCTCGAGTC 60.125 66.667 12.31 3.27 0.00 3.36
3109 6182 2.604686 AAGCCTGCCCTCGAGTCA 60.605 61.111 12.31 8.00 0.00 3.41
3110 6183 2.654079 AAGCCTGCCCTCGAGTCAG 61.654 63.158 19.33 19.33 0.00 3.51
3121 6200 2.046217 GAGTCAGGGGCGGTTTCC 60.046 66.667 0.00 0.00 0.00 3.13
3122 6201 2.852075 AGTCAGGGGCGGTTTCCA 60.852 61.111 0.00 0.00 0.00 3.53
3129 6208 1.569072 AGGGGCGGTTTCCATTTCTAT 59.431 47.619 0.00 0.00 0.00 1.98
3133 6212 2.165437 GGCGGTTTCCATTTCTATGCAA 59.835 45.455 0.00 0.00 0.00 4.08
3140 6227 6.587608 GGTTTCCATTTCTATGCAAAGTTCTG 59.412 38.462 0.00 0.00 0.00 3.02
3170 6257 8.016497 TGCAAGTGTTAATTTTATGTCATTGC 57.984 30.769 0.00 0.00 38.79 3.56
3171 6258 7.117523 TGCAAGTGTTAATTTTATGTCATTGCC 59.882 33.333 0.00 0.00 37.84 4.52
3172 6259 7.117523 GCAAGTGTTAATTTTATGTCATTGCCA 59.882 33.333 0.00 0.00 33.78 4.92
3174 6261 8.706492 AGTGTTAATTTTATGTCATTGCCATG 57.294 30.769 0.00 0.00 0.00 3.66
3176 6263 9.149225 GTGTTAATTTTATGTCATTGCCATGAA 57.851 29.630 1.37 0.00 41.30 2.57
3177 6264 9.716531 TGTTAATTTTATGTCATTGCCATGAAA 57.283 25.926 1.37 0.00 41.30 2.69
3183 6270 9.504708 TTTTATGTCATTGCCATGAAATTTCTT 57.495 25.926 18.64 10.06 41.30 2.52
3186 6273 8.657074 ATGTCATTGCCATGAAATTTCTTATG 57.343 30.769 18.64 13.98 41.30 1.90
3187 6274 7.838884 TGTCATTGCCATGAAATTTCTTATGA 58.161 30.769 18.64 14.01 41.30 2.15
3189 6276 8.975439 GTCATTGCCATGAAATTTCTTATGATC 58.025 33.333 18.64 10.30 41.30 2.92
3190 6277 8.920174 TCATTGCCATGAAATTTCTTATGATCT 58.080 29.630 18.64 0.26 36.41 2.75
3192 6279 6.962686 TGCCATGAAATTTCTTATGATCTCG 58.037 36.000 18.64 4.21 0.00 4.04
3194 6281 7.067372 TGCCATGAAATTTCTTATGATCTCGTT 59.933 33.333 18.64 0.00 0.00 3.85
3195 6282 8.559536 GCCATGAAATTTCTTATGATCTCGTTA 58.440 33.333 18.64 0.00 0.00 3.18
3196 6283 9.869844 CCATGAAATTTCTTATGATCTCGTTAC 57.130 33.333 18.64 0.00 0.00 2.50
3199 6286 9.869757 TGAAATTTCTTATGATCTCGTTACAGA 57.130 29.630 18.64 0.00 0.00 3.41
3202 6289 9.823647 AATTTCTTATGATCTCGTTACAGATGT 57.176 29.630 0.00 0.00 32.94 3.06
3206 6293 9.899226 TCTTATGATCTCGTTACAGATGTATTG 57.101 33.333 0.00 0.00 32.94 1.90
3207 6294 8.520835 TTATGATCTCGTTACAGATGTATTGC 57.479 34.615 0.00 0.00 32.94 3.56
3208 6295 6.149129 TGATCTCGTTACAGATGTATTGCT 57.851 37.500 0.00 0.00 32.94 3.91
3209 6296 7.272037 TGATCTCGTTACAGATGTATTGCTA 57.728 36.000 0.00 0.00 32.94 3.49
3210 6297 7.712797 TGATCTCGTTACAGATGTATTGCTAA 58.287 34.615 0.00 0.00 32.94 3.09
3211 6298 7.862873 TGATCTCGTTACAGATGTATTGCTAAG 59.137 37.037 0.00 0.00 32.94 2.18
3212 6299 6.504398 TCTCGTTACAGATGTATTGCTAAGG 58.496 40.000 0.00 0.00 0.00 2.69
3213 6300 5.597806 TCGTTACAGATGTATTGCTAAGGG 58.402 41.667 0.00 0.00 0.00 3.95
3214 6301 5.128171 TCGTTACAGATGTATTGCTAAGGGT 59.872 40.000 0.00 0.00 0.00 4.34
3223 6313 1.036707 TTGCTAAGGGTTTGTGTGGC 58.963 50.000 0.00 0.00 0.00 5.01
3239 6329 3.111038 GCGTCCTGCAATTAGGCC 58.889 61.111 0.00 0.00 45.45 5.19
3240 6330 1.748879 GCGTCCTGCAATTAGGCCA 60.749 57.895 5.01 0.00 45.45 5.36
3241 6331 1.103398 GCGTCCTGCAATTAGGCCAT 61.103 55.000 5.01 0.00 45.45 4.40
3242 6332 0.947244 CGTCCTGCAATTAGGCCATC 59.053 55.000 5.01 0.00 37.76 3.51
3243 6333 1.475751 CGTCCTGCAATTAGGCCATCT 60.476 52.381 5.01 0.00 37.76 2.90
3244 6334 1.952296 GTCCTGCAATTAGGCCATCTG 59.048 52.381 5.01 0.00 37.76 2.90
3245 6335 1.133699 TCCTGCAATTAGGCCATCTGG 60.134 52.381 5.01 0.67 37.76 3.86
3278 6376 7.272037 GACTTGAAGTCAAAATCCCTGTTTA 57.728 36.000 19.73 0.00 44.45 2.01
3280 6378 6.605594 ACTTGAAGTCAAAATCCCTGTTTACA 59.394 34.615 0.00 0.00 35.15 2.41
3281 6379 6.633500 TGAAGTCAAAATCCCTGTTTACAG 57.367 37.500 2.86 2.86 43.40 2.74
3282 6380 6.126409 TGAAGTCAAAATCCCTGTTTACAGT 58.874 36.000 8.91 0.00 42.27 3.55
3283 6381 7.284074 TGAAGTCAAAATCCCTGTTTACAGTA 58.716 34.615 8.91 0.00 42.27 2.74
3284 6382 7.942341 TGAAGTCAAAATCCCTGTTTACAGTAT 59.058 33.333 8.91 0.18 42.27 2.12
3285 6383 7.687941 AGTCAAAATCCCTGTTTACAGTATG 57.312 36.000 8.91 0.00 42.27 2.39
3324 6422 8.912787 TCGACAAAGAGTATGTTTATCTTCTC 57.087 34.615 0.00 0.00 32.21 2.87
3340 6438 8.964476 TTATCTTCTCTATGCCTTTTTGTAGG 57.036 34.615 0.00 0.00 38.40 3.18
3386 6484 2.028476 TCCAGTAACCACAGGATGAACG 60.028 50.000 0.00 0.00 39.69 3.95
3432 6531 7.284944 ACTTCCCTGATCATTCTGATTTCATTC 59.715 37.037 0.00 0.00 37.20 2.67
3464 6568 6.051717 AGGATCAATATGTACAACTGTCTGC 58.948 40.000 0.00 0.00 0.00 4.26
3546 6656 6.884832 ACATGTCGTATAAGATGGGAGAAAA 58.115 36.000 0.00 0.00 0.00 2.29
3555 6665 9.274206 GTATAAGATGGGAGAAAATCAAGGTAC 57.726 37.037 0.00 0.00 0.00 3.34
3568 6678 3.122297 TCAAGGTACCGTGTAAACAACG 58.878 45.455 24.53 0.00 0.00 4.10
3596 6742 6.323203 TGATTTTCTCTCTTGCCAAGAAAG 57.677 37.500 8.74 4.92 39.45 2.62
3604 6750 7.170965 TCTCTCTTGCCAAGAAAGTATCAAAT 58.829 34.615 8.74 0.00 37.02 2.32
3626 6772 8.430063 CAAATGCTTTCAATGTCTTGTAATGTC 58.570 33.333 0.00 0.00 33.87 3.06
3645 6791 9.046296 GTAATGTCGATTTAGATTGTCCTTGAT 57.954 33.333 0.00 0.00 0.00 2.57
3646 6792 6.908870 TGTCGATTTAGATTGTCCTTGATG 57.091 37.500 0.00 0.00 0.00 3.07
3647 6793 5.294306 TGTCGATTTAGATTGTCCTTGATGC 59.706 40.000 0.00 0.00 0.00 3.91
3648 6794 5.525378 GTCGATTTAGATTGTCCTTGATGCT 59.475 40.000 0.00 0.00 0.00 3.79
3649 6795 6.037610 GTCGATTTAGATTGTCCTTGATGCTT 59.962 38.462 0.00 0.00 0.00 3.91
3650 6796 6.037500 TCGATTTAGATTGTCCTTGATGCTTG 59.962 38.462 0.00 0.00 0.00 4.01
3651 6797 4.970662 TTAGATTGTCCTTGATGCTTGC 57.029 40.909 0.00 0.00 0.00 4.01
3652 6798 3.083122 AGATTGTCCTTGATGCTTGCT 57.917 42.857 0.00 0.00 0.00 3.91
3653 6799 4.226427 AGATTGTCCTTGATGCTTGCTA 57.774 40.909 0.00 0.00 0.00 3.49
3698 6853 1.991264 GCTTCGAGTTACCGTTTCCTC 59.009 52.381 0.00 0.00 0.00 3.71
3702 6857 2.030540 TCGAGTTACCGTTTCCTCACTG 60.031 50.000 0.00 0.00 0.00 3.66
3705 6860 3.725490 AGTTACCGTTTCCTCACTGAAC 58.275 45.455 0.00 0.00 0.00 3.18
3710 6865 4.969484 ACCGTTTCCTCACTGAACTTTAT 58.031 39.130 0.00 0.00 0.00 1.40
3716 6871 5.738619 TCCTCACTGAACTTTATGTGCTA 57.261 39.130 0.00 0.00 0.00 3.49
3726 6881 9.102757 CTGAACTTTATGTGCTATGTCTATTGT 57.897 33.333 0.00 0.00 0.00 2.71
3741 6904 4.455877 GTCTATTGTGACTTGTTTCCCTGG 59.544 45.833 0.00 0.00 34.39 4.45
3744 6907 1.152830 TGACTTGTTTCCCTGGGCC 59.847 57.895 8.22 0.00 0.00 5.80
3756 6919 2.175499 TCCCTGGGCCATTTTATGAGAG 59.825 50.000 6.72 0.00 0.00 3.20
3770 6967 7.745620 TTTTATGAGAGAGTTTGTCCTTTCC 57.254 36.000 0.00 0.00 0.00 3.13
3786 6983 3.303462 TCCAAATGGGAATGGCTGG 57.697 52.632 0.00 0.00 44.80 4.85
3799 6996 4.462834 GGAATGGCTGGCTTACTTTAACTT 59.537 41.667 2.00 0.00 0.00 2.66
3807 7004 7.702348 GGCTGGCTTACTTTAACTTTGAATATG 59.298 37.037 0.00 0.00 0.00 1.78
3831 7044 7.962441 TGAATAGGTAAGCTAATGCACTCATA 58.038 34.615 0.00 0.00 42.74 2.15
3859 7073 0.320508 GTCGGCCCTTCTTCGACTTT 60.321 55.000 0.00 0.00 46.49 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.480954 GCTTCTCCCGGACAATACTCA 59.519 52.381 0.73 0.00 0.00 3.41
4 5 1.757699 AGCTTCTCCCGGACAATACTC 59.242 52.381 0.73 0.00 0.00 2.59
5 6 1.867363 AGCTTCTCCCGGACAATACT 58.133 50.000 0.73 0.00 0.00 2.12
6 7 3.814005 TTAGCTTCTCCCGGACAATAC 57.186 47.619 0.73 0.00 0.00 1.89
7 8 3.709653 ACATTAGCTTCTCCCGGACAATA 59.290 43.478 0.73 0.00 0.00 1.90
8 9 2.505819 ACATTAGCTTCTCCCGGACAAT 59.494 45.455 0.73 0.00 0.00 2.71
9 10 1.906574 ACATTAGCTTCTCCCGGACAA 59.093 47.619 0.73 0.00 0.00 3.18
10 11 1.568504 ACATTAGCTTCTCCCGGACA 58.431 50.000 0.73 0.00 0.00 4.02
11 12 2.280628 CAACATTAGCTTCTCCCGGAC 58.719 52.381 0.73 0.00 0.00 4.79
12 13 1.906574 ACAACATTAGCTTCTCCCGGA 59.093 47.619 0.73 0.00 0.00 5.14
13 14 2.403252 ACAACATTAGCTTCTCCCGG 57.597 50.000 0.00 0.00 0.00 5.73
14 15 2.159517 GCAACAACATTAGCTTCTCCCG 60.160 50.000 0.00 0.00 0.00 5.14
15 16 2.819608 TGCAACAACATTAGCTTCTCCC 59.180 45.455 0.00 0.00 0.00 4.30
16 17 3.826466 GTGCAACAACATTAGCTTCTCC 58.174 45.455 0.00 0.00 36.32 3.71
31 32 6.813152 AGCTATTTGGTTAATTCATGTGCAAC 59.187 34.615 0.00 0.00 37.35 4.17
32 33 6.934056 AGCTATTTGGTTAATTCATGTGCAA 58.066 32.000 0.00 0.00 0.00 4.08
33 34 6.528537 AGCTATTTGGTTAATTCATGTGCA 57.471 33.333 0.00 0.00 0.00 4.57
34 35 6.632834 CGTAGCTATTTGGTTAATTCATGTGC 59.367 38.462 0.00 0.00 0.00 4.57
35 36 7.693952 ACGTAGCTATTTGGTTAATTCATGTG 58.306 34.615 0.00 0.00 0.00 3.21
36 37 7.859325 ACGTAGCTATTTGGTTAATTCATGT 57.141 32.000 0.00 0.00 0.00 3.21
38 39 9.998106 AGATACGTAGCTATTTGGTTAATTCAT 57.002 29.630 12.49 0.00 0.00 2.57
39 40 9.826574 AAGATACGTAGCTATTTGGTTAATTCA 57.173 29.630 14.67 0.00 0.00 2.57
41 42 8.975439 CGAAGATACGTAGCTATTTGGTTAATT 58.025 33.333 14.67 0.00 0.00 1.40
42 43 8.139989 ACGAAGATACGTAGCTATTTGGTTAAT 58.860 33.333 14.67 0.00 44.72 1.40
43 44 7.483307 ACGAAGATACGTAGCTATTTGGTTAA 58.517 34.615 14.67 0.00 44.72 2.01
44 45 7.031226 ACGAAGATACGTAGCTATTTGGTTA 57.969 36.000 14.67 0.00 44.72 2.85
45 46 5.899299 ACGAAGATACGTAGCTATTTGGTT 58.101 37.500 14.67 0.00 44.72 3.67
46 47 5.511234 ACGAAGATACGTAGCTATTTGGT 57.489 39.130 14.67 3.31 44.72 3.67
47 48 6.823678 AAACGAAGATACGTAGCTATTTGG 57.176 37.500 14.67 2.64 45.83 3.28
48 49 7.672738 ACAAAACGAAGATACGTAGCTATTTG 58.327 34.615 24.22 24.22 45.83 2.32
49 50 7.823149 ACAAAACGAAGATACGTAGCTATTT 57.177 32.000 14.67 11.95 45.83 1.40
50 51 8.915871 TTACAAAACGAAGATACGTAGCTATT 57.084 30.769 14.67 6.45 45.83 1.73
51 52 8.965172 CATTACAAAACGAAGATACGTAGCTAT 58.035 33.333 14.67 4.55 45.83 2.97
52 53 8.183536 TCATTACAAAACGAAGATACGTAGCTA 58.816 33.333 14.67 0.00 45.83 3.32
53 54 7.031372 TCATTACAAAACGAAGATACGTAGCT 58.969 34.615 7.71 7.71 45.83 3.32
54 55 7.008992 ACTCATTACAAAACGAAGATACGTAGC 59.991 37.037 1.72 1.72 45.83 3.58
55 56 8.311822 CACTCATTACAAAACGAAGATACGTAG 58.688 37.037 0.08 0.00 45.83 3.51
56 57 7.274033 CCACTCATTACAAAACGAAGATACGTA 59.726 37.037 0.00 0.00 45.83 3.57
58 59 6.455113 CCCACTCATTACAAAACGAAGATACG 60.455 42.308 0.00 0.00 39.31 3.06
59 60 6.674760 GCCCACTCATTACAAAACGAAGATAC 60.675 42.308 0.00 0.00 0.00 2.24
60 61 5.353123 GCCCACTCATTACAAAACGAAGATA 59.647 40.000 0.00 0.00 0.00 1.98
61 62 4.156008 GCCCACTCATTACAAAACGAAGAT 59.844 41.667 0.00 0.00 0.00 2.40
62 63 3.500680 GCCCACTCATTACAAAACGAAGA 59.499 43.478 0.00 0.00 0.00 2.87
63 64 3.502211 AGCCCACTCATTACAAAACGAAG 59.498 43.478 0.00 0.00 0.00 3.79
64 65 3.252215 CAGCCCACTCATTACAAAACGAA 59.748 43.478 0.00 0.00 0.00 3.85
65 66 2.811431 CAGCCCACTCATTACAAAACGA 59.189 45.455 0.00 0.00 0.00 3.85
66 67 2.811431 TCAGCCCACTCATTACAAAACG 59.189 45.455 0.00 0.00 0.00 3.60
67 68 4.518970 TCTTCAGCCCACTCATTACAAAAC 59.481 41.667 0.00 0.00 0.00 2.43
68 69 4.724399 TCTTCAGCCCACTCATTACAAAA 58.276 39.130 0.00 0.00 0.00 2.44
69 70 4.365514 TCTTCAGCCCACTCATTACAAA 57.634 40.909 0.00 0.00 0.00 2.83
70 71 4.019411 TCATCTTCAGCCCACTCATTACAA 60.019 41.667 0.00 0.00 0.00 2.41
71 72 3.519107 TCATCTTCAGCCCACTCATTACA 59.481 43.478 0.00 0.00 0.00 2.41
72 73 4.142609 TCATCTTCAGCCCACTCATTAC 57.857 45.455 0.00 0.00 0.00 1.89
73 74 4.202398 GGATCATCTTCAGCCCACTCATTA 60.202 45.833 0.00 0.00 0.00 1.90
74 75 3.434739 GGATCATCTTCAGCCCACTCATT 60.435 47.826 0.00 0.00 0.00 2.57
75 76 2.106166 GGATCATCTTCAGCCCACTCAT 59.894 50.000 0.00 0.00 0.00 2.90
76 77 1.487976 GGATCATCTTCAGCCCACTCA 59.512 52.381 0.00 0.00 0.00 3.41
77 78 1.767681 AGGATCATCTTCAGCCCACTC 59.232 52.381 0.00 0.00 0.00 3.51
78 79 1.890552 AGGATCATCTTCAGCCCACT 58.109 50.000 0.00 0.00 0.00 4.00
79 80 2.725221 AAGGATCATCTTCAGCCCAC 57.275 50.000 0.00 0.00 0.00 4.61
80 81 3.975982 TCATAAGGATCATCTTCAGCCCA 59.024 43.478 0.00 0.00 0.00 5.36
81 82 4.577875 CTCATAAGGATCATCTTCAGCCC 58.422 47.826 0.00 0.00 0.00 5.19
82 83 4.002316 GCTCATAAGGATCATCTTCAGCC 58.998 47.826 0.00 0.00 0.00 4.85
83 84 4.897140 AGCTCATAAGGATCATCTTCAGC 58.103 43.478 0.00 0.00 0.00 4.26
84 85 7.230849 AGTAGCTCATAAGGATCATCTTCAG 57.769 40.000 0.00 0.00 0.00 3.02
85 86 7.609097 AAGTAGCTCATAAGGATCATCTTCA 57.391 36.000 0.00 0.00 0.00 3.02
86 87 8.367156 AGAAAGTAGCTCATAAGGATCATCTTC 58.633 37.037 0.00 0.00 0.00 2.87
87 88 8.261349 AGAAAGTAGCTCATAAGGATCATCTT 57.739 34.615 0.00 0.00 0.00 2.40
88 89 7.729881 AGAGAAAGTAGCTCATAAGGATCATCT 59.270 37.037 0.00 0.00 34.85 2.90
89 90 7.895759 AGAGAAAGTAGCTCATAAGGATCATC 58.104 38.462 0.00 0.00 34.85 2.92
90 91 7.854166 AGAGAAAGTAGCTCATAAGGATCAT 57.146 36.000 0.00 0.00 34.85 2.45
91 92 8.948401 ATAGAGAAAGTAGCTCATAAGGATCA 57.052 34.615 0.00 0.00 34.85 2.92
92 93 9.638239 CAATAGAGAAAGTAGCTCATAAGGATC 57.362 37.037 0.00 0.00 34.85 3.36
93 94 9.373450 TCAATAGAGAAAGTAGCTCATAAGGAT 57.627 33.333 0.00 0.00 34.85 3.24
94 95 8.768501 TCAATAGAGAAAGTAGCTCATAAGGA 57.231 34.615 0.00 0.00 34.85 3.36
95 96 9.638239 GATCAATAGAGAAAGTAGCTCATAAGG 57.362 37.037 0.00 0.00 34.85 2.69
112 113 9.851686 AGCAGGTTTACATATTTGATCAATAGA 57.148 29.630 9.40 0.00 30.48 1.98
116 117 9.461312 AGTAAGCAGGTTTACATATTTGATCAA 57.539 29.630 3.38 3.38 36.27 2.57
117 118 8.892723 CAGTAAGCAGGTTTACATATTTGATCA 58.107 33.333 8.42 0.00 36.27 2.92
118 119 7.857885 GCAGTAAGCAGGTTTACATATTTGATC 59.142 37.037 8.42 0.00 44.79 2.92
119 120 7.707104 GCAGTAAGCAGGTTTACATATTTGAT 58.293 34.615 8.42 0.00 44.79 2.57
120 121 7.083875 GCAGTAAGCAGGTTTACATATTTGA 57.916 36.000 8.42 0.00 44.79 2.69
136 137 2.202946 GCGGAGGGAGCAGTAAGC 60.203 66.667 0.00 0.00 46.19 3.09
137 138 1.153549 GTGCGGAGGGAGCAGTAAG 60.154 63.158 0.00 0.00 46.10 2.34
138 139 2.656069 GGTGCGGAGGGAGCAGTAA 61.656 63.158 0.00 0.00 46.10 2.24
139 140 3.075005 GGTGCGGAGGGAGCAGTA 61.075 66.667 0.00 0.00 46.10 2.74
141 142 1.971505 TTATGGTGCGGAGGGAGCAG 61.972 60.000 0.00 0.00 45.23 4.24
142 143 1.344953 ATTATGGTGCGGAGGGAGCA 61.345 55.000 0.00 0.00 46.08 4.26
143 144 0.685097 TATTATGGTGCGGAGGGAGC 59.315 55.000 0.00 0.00 0.00 4.70
144 145 4.466370 TCTTATATTATGGTGCGGAGGGAG 59.534 45.833 0.00 0.00 0.00 4.30
145 146 4.222145 GTCTTATATTATGGTGCGGAGGGA 59.778 45.833 0.00 0.00 0.00 4.20
146 147 4.504858 GTCTTATATTATGGTGCGGAGGG 58.495 47.826 0.00 0.00 0.00 4.30
147 148 4.174009 CGTCTTATATTATGGTGCGGAGG 58.826 47.826 0.00 0.00 0.00 4.30
148 149 4.806330 ACGTCTTATATTATGGTGCGGAG 58.194 43.478 0.00 0.00 0.00 4.63
149 150 4.859304 ACGTCTTATATTATGGTGCGGA 57.141 40.909 0.00 0.00 0.00 5.54
150 151 7.453034 CAATAACGTCTTATATTATGGTGCGG 58.547 38.462 0.00 0.00 0.00 5.69
151 152 6.953743 GCAATAACGTCTTATATTATGGTGCG 59.046 38.462 0.00 0.00 0.00 5.34
152 153 7.802738 TGCAATAACGTCTTATATTATGGTGC 58.197 34.615 0.00 0.00 0.00 5.01
161 162 9.232082 GCATTTCAAATGCAATAACGTCTTATA 57.768 29.630 27.01 0.00 44.00 0.98
162 163 8.118893 GCATTTCAAATGCAATAACGTCTTAT 57.881 30.769 27.01 0.00 44.00 1.73
163 164 7.504922 GCATTTCAAATGCAATAACGTCTTA 57.495 32.000 27.01 0.00 44.00 2.10
164 165 6.393720 GCATTTCAAATGCAATAACGTCTT 57.606 33.333 27.01 0.00 44.00 3.01
174 175 9.836648 ACGAGACGTTATTGCATTTCAAATGCA 62.837 37.037 30.02 30.02 44.79 3.96
175 176 5.275418 CGAGACGTTATTGCATTTCAAATGC 60.275 40.000 25.60 25.60 44.76 3.56
176 177 5.794945 ACGAGACGTTATTGCATTTCAAATG 59.205 36.000 5.68 5.68 36.35 2.32
177 178 5.938322 ACGAGACGTTATTGCATTTCAAAT 58.062 33.333 0.00 0.00 36.35 2.32
178 179 5.351233 ACGAGACGTTATTGCATTTCAAA 57.649 34.783 0.00 0.00 36.35 2.69
179 180 6.656314 ATACGAGACGTTATTGCATTTCAA 57.344 33.333 1.53 0.00 41.54 2.69
180 181 6.656314 AATACGAGACGTTATTGCATTTCA 57.344 33.333 1.53 0.00 41.54 2.69
181 182 7.281484 CCTAATACGAGACGTTATTGCATTTC 58.719 38.462 1.53 0.00 41.54 2.17
182 183 6.292703 GCCTAATACGAGACGTTATTGCATTT 60.293 38.462 1.53 0.00 41.54 2.32
183 184 5.176958 GCCTAATACGAGACGTTATTGCATT 59.823 40.000 1.53 0.00 41.54 3.56
184 185 4.684703 GCCTAATACGAGACGTTATTGCAT 59.315 41.667 1.53 0.00 41.54 3.96
185 186 4.046462 GCCTAATACGAGACGTTATTGCA 58.954 43.478 1.53 0.00 41.54 4.08
186 187 4.296690 AGCCTAATACGAGACGTTATTGC 58.703 43.478 1.53 0.74 41.54 3.56
187 188 6.527023 CCATAGCCTAATACGAGACGTTATTG 59.473 42.308 1.53 0.00 41.54 1.90
188 189 6.432162 TCCATAGCCTAATACGAGACGTTATT 59.568 38.462 1.53 0.00 41.54 1.40
189 190 5.942236 TCCATAGCCTAATACGAGACGTTAT 59.058 40.000 1.53 0.00 41.54 1.89
190 191 5.308014 TCCATAGCCTAATACGAGACGTTA 58.692 41.667 1.53 0.00 41.54 3.18
191 192 4.139786 TCCATAGCCTAATACGAGACGTT 58.860 43.478 1.53 0.00 41.54 3.99
192 193 3.748083 TCCATAGCCTAATACGAGACGT 58.252 45.455 0.00 0.00 44.35 4.34
193 194 3.127203 CCTCCATAGCCTAATACGAGACG 59.873 52.174 0.00 0.00 0.00 4.18
194 195 4.080687 ACCTCCATAGCCTAATACGAGAC 58.919 47.826 0.00 0.00 0.00 3.36
195 196 4.383931 ACCTCCATAGCCTAATACGAGA 57.616 45.455 0.00 0.00 0.00 4.04
196 197 5.254901 ACTACCTCCATAGCCTAATACGAG 58.745 45.833 0.00 0.00 0.00 4.18
197 198 5.252586 ACTACCTCCATAGCCTAATACGA 57.747 43.478 0.00 0.00 0.00 3.43
198 199 5.979288 AACTACCTCCATAGCCTAATACG 57.021 43.478 0.00 0.00 0.00 3.06
202 203 9.664777 TCTTTATTAACTACCTCCATAGCCTAA 57.335 33.333 0.00 0.00 0.00 2.69
203 204 9.310449 CTCTTTATTAACTACCTCCATAGCCTA 57.690 37.037 0.00 0.00 0.00 3.93
204 205 7.235812 CCTCTTTATTAACTACCTCCATAGCCT 59.764 40.741 0.00 0.00 0.00 4.58
205 206 7.234988 TCCTCTTTATTAACTACCTCCATAGCC 59.765 40.741 0.00 0.00 0.00 3.93
206 207 8.191534 TCCTCTTTATTAACTACCTCCATAGC 57.808 38.462 0.00 0.00 0.00 2.97
208 209 9.725206 ACTTCCTCTTTATTAACTACCTCCATA 57.275 33.333 0.00 0.00 0.00 2.74
209 210 8.625467 ACTTCCTCTTTATTAACTACCTCCAT 57.375 34.615 0.00 0.00 0.00 3.41
210 211 9.551339 TTACTTCCTCTTTATTAACTACCTCCA 57.449 33.333 0.00 0.00 0.00 3.86
236 237 8.624776 GCCAGCAGTATCATTTTCTTATAACTT 58.375 33.333 0.00 0.00 0.00 2.66
237 238 7.775093 TGCCAGCAGTATCATTTTCTTATAACT 59.225 33.333 0.00 0.00 0.00 2.24
238 239 7.930217 TGCCAGCAGTATCATTTTCTTATAAC 58.070 34.615 0.00 0.00 0.00 1.89
239 240 8.158169 CTGCCAGCAGTATCATTTTCTTATAA 57.842 34.615 11.55 0.00 39.10 0.98
240 241 7.734924 CTGCCAGCAGTATCATTTTCTTATA 57.265 36.000 11.55 0.00 39.10 0.98
241 242 6.630444 CTGCCAGCAGTATCATTTTCTTAT 57.370 37.500 11.55 0.00 39.10 1.73
243 244 4.978083 CTGCCAGCAGTATCATTTTCTT 57.022 40.909 11.55 0.00 39.10 2.52
256 257 2.694628 AGAAAATTGTGAACTGCCAGCA 59.305 40.909 0.00 0.00 0.00 4.41
257 258 3.375782 AGAAAATTGTGAACTGCCAGC 57.624 42.857 0.00 0.00 0.00 4.85
258 259 5.702670 TCTCTAGAAAATTGTGAACTGCCAG 59.297 40.000 0.00 0.00 0.00 4.85
259 260 5.620206 TCTCTAGAAAATTGTGAACTGCCA 58.380 37.500 0.00 0.00 0.00 4.92
260 261 6.348868 CCTTCTCTAGAAAATTGTGAACTGCC 60.349 42.308 0.00 0.00 33.07 4.85
261 262 6.606768 CCTTCTCTAGAAAATTGTGAACTGC 58.393 40.000 0.00 0.00 33.07 4.40
262 263 6.205464 TGCCTTCTCTAGAAAATTGTGAACTG 59.795 38.462 0.00 0.00 33.07 3.16
263 264 6.299141 TGCCTTCTCTAGAAAATTGTGAACT 58.701 36.000 0.00 0.00 33.07 3.01
264 265 6.560253 TGCCTTCTCTAGAAAATTGTGAAC 57.440 37.500 0.00 0.00 33.07 3.18
265 266 6.545666 TGTTGCCTTCTCTAGAAAATTGTGAA 59.454 34.615 0.00 0.00 33.07 3.18
266 267 6.061441 TGTTGCCTTCTCTAGAAAATTGTGA 58.939 36.000 0.00 0.00 33.07 3.58
267 268 6.317789 TGTTGCCTTCTCTAGAAAATTGTG 57.682 37.500 0.00 0.00 33.07 3.33
268 269 7.530426 AATGTTGCCTTCTCTAGAAAATTGT 57.470 32.000 0.00 0.00 33.07 2.71
269 270 8.302438 AGAAATGTTGCCTTCTCTAGAAAATTG 58.698 33.333 0.00 0.00 33.07 2.32
270 271 8.414629 AGAAATGTTGCCTTCTCTAGAAAATT 57.585 30.769 0.00 0.00 33.07 1.82
271 272 8.414629 AAGAAATGTTGCCTTCTCTAGAAAAT 57.585 30.769 0.00 0.00 33.07 1.82
272 273 7.823745 AAGAAATGTTGCCTTCTCTAGAAAA 57.176 32.000 0.00 0.00 33.07 2.29
273 274 7.607991 CCTAAGAAATGTTGCCTTCTCTAGAAA 59.392 37.037 0.00 0.00 33.07 2.52
274 275 7.106239 CCTAAGAAATGTTGCCTTCTCTAGAA 58.894 38.462 0.00 0.00 30.57 2.10
275 276 6.644347 CCTAAGAAATGTTGCCTTCTCTAGA 58.356 40.000 0.00 0.00 30.57 2.43
276 277 5.295540 GCCTAAGAAATGTTGCCTTCTCTAG 59.704 44.000 0.00 0.00 30.57 2.43
277 278 5.186198 GCCTAAGAAATGTTGCCTTCTCTA 58.814 41.667 0.00 0.00 30.57 2.43
278 279 4.013050 GCCTAAGAAATGTTGCCTTCTCT 58.987 43.478 0.00 0.00 30.57 3.10
279 280 3.758554 TGCCTAAGAAATGTTGCCTTCTC 59.241 43.478 0.00 0.00 30.57 2.87
280 281 3.766545 TGCCTAAGAAATGTTGCCTTCT 58.233 40.909 0.00 0.00 33.25 2.85
281 282 4.725790 ATGCCTAAGAAATGTTGCCTTC 57.274 40.909 0.00 0.00 0.00 3.46
282 283 5.488262 AAATGCCTAAGAAATGTTGCCTT 57.512 34.783 0.00 0.00 0.00 4.35
283 284 5.951747 TCTAAATGCCTAAGAAATGTTGCCT 59.048 36.000 0.00 0.00 0.00 4.75
284 285 6.095440 TCTCTAAATGCCTAAGAAATGTTGCC 59.905 38.462 0.00 0.00 0.00 4.52
285 286 7.088589 TCTCTAAATGCCTAAGAAATGTTGC 57.911 36.000 0.00 0.00 0.00 4.17
286 287 8.734386 ACTTCTCTAAATGCCTAAGAAATGTTG 58.266 33.333 0.00 0.00 0.00 3.33
287 288 8.870075 ACTTCTCTAAATGCCTAAGAAATGTT 57.130 30.769 0.00 0.00 0.00 2.71
288 289 8.870075 AACTTCTCTAAATGCCTAAGAAATGT 57.130 30.769 0.00 0.00 0.00 2.71
291 292 9.787435 TGTTAACTTCTCTAAATGCCTAAGAAA 57.213 29.630 7.22 0.00 0.00 2.52
292 293 9.787435 TTGTTAACTTCTCTAAATGCCTAAGAA 57.213 29.630 7.22 0.00 0.00 2.52
293 294 9.787435 TTTGTTAACTTCTCTAAATGCCTAAGA 57.213 29.630 7.22 0.00 0.00 2.10
297 298 8.860088 ACAATTTGTTAACTTCTCTAAATGCCT 58.140 29.630 7.22 0.00 0.00 4.75
298 299 9.476202 AACAATTTGTTAACTTCTCTAAATGCC 57.524 29.630 12.98 0.00 39.09 4.40
772 777 2.656069 GCTGGCTTGTCCTCCGGTA 61.656 63.158 0.00 0.00 35.26 4.02
773 778 4.021925 GCTGGCTTGTCCTCCGGT 62.022 66.667 0.00 0.00 35.26 5.28
774 779 4.785453 GGCTGGCTTGTCCTCCGG 62.785 72.222 0.00 0.00 35.26 5.14
776 781 2.045536 CTGGCTGGCTTGTCCTCC 60.046 66.667 2.00 0.00 35.26 4.30
777 782 2.749441 GCTGGCTGGCTTGTCCTC 60.749 66.667 2.00 0.00 35.26 3.71
778 783 4.357279 GGCTGGCTGGCTTGTCCT 62.357 66.667 10.74 0.00 38.32 3.85
880 885 2.282180 TGTTGAAAGGGCCGGAGC 60.282 61.111 5.05 0.00 38.76 4.70
881 886 0.955919 GACTGTTGAAAGGGCCGGAG 60.956 60.000 5.05 0.00 0.00 4.63
882 887 1.072505 GACTGTTGAAAGGGCCGGA 59.927 57.895 5.05 0.00 0.00 5.14
883 888 1.228124 TGACTGTTGAAAGGGCCGG 60.228 57.895 0.00 0.00 0.00 6.13
884 889 0.535102 AGTGACTGTTGAAAGGGCCG 60.535 55.000 0.00 0.00 0.00 6.13
885 890 0.954452 CAGTGACTGTTGAAAGGGCC 59.046 55.000 4.01 0.00 0.00 5.80
886 891 1.604278 GTCAGTGACTGTTGAAAGGGC 59.396 52.381 16.26 0.00 32.61 5.19
887 892 3.134458 GAGTCAGTGACTGTTGAAAGGG 58.866 50.000 30.12 0.00 43.53 3.95
888 893 4.054671 GAGAGTCAGTGACTGTTGAAAGG 58.945 47.826 30.12 0.00 43.53 3.11
889 894 4.054671 GGAGAGTCAGTGACTGTTGAAAG 58.945 47.826 30.12 0.00 43.53 2.62
890 895 3.181465 GGGAGAGTCAGTGACTGTTGAAA 60.181 47.826 30.12 0.00 43.53 2.69
891 896 2.365617 GGGAGAGTCAGTGACTGTTGAA 59.634 50.000 30.12 0.00 43.53 2.69
892 897 1.964223 GGGAGAGTCAGTGACTGTTGA 59.036 52.381 30.12 0.00 43.53 3.18
893 898 1.336332 CGGGAGAGTCAGTGACTGTTG 60.336 57.143 30.12 15.49 43.53 3.33
894 899 0.962489 CGGGAGAGTCAGTGACTGTT 59.038 55.000 30.12 17.46 43.53 3.16
895 900 1.528292 GCGGGAGAGTCAGTGACTGT 61.528 60.000 30.12 26.00 43.53 3.55
965 975 1.513800 CTCTGCACTCACTCGCTCG 60.514 63.158 0.00 0.00 0.00 5.03
966 976 1.153862 CCTCTGCACTCACTCGCTC 60.154 63.158 0.00 0.00 0.00 5.03
967 977 2.644212 CCCTCTGCACTCACTCGCT 61.644 63.158 0.00 0.00 0.00 4.93
968 978 2.125753 CCCTCTGCACTCACTCGC 60.126 66.667 0.00 0.00 0.00 5.03
969 979 1.979155 TCCCCTCTGCACTCACTCG 60.979 63.158 0.00 0.00 0.00 4.18
970 980 0.902516 AGTCCCCTCTGCACTCACTC 60.903 60.000 0.00 0.00 0.00 3.51
971 981 1.157276 AGTCCCCTCTGCACTCACT 59.843 57.895 0.00 0.00 0.00 3.41
972 982 1.294780 CAGTCCCCTCTGCACTCAC 59.705 63.158 0.00 0.00 0.00 3.51
982 992 2.138236 ATTGTCCTCCCCAGTCCCCT 62.138 60.000 0.00 0.00 0.00 4.79
1335 1346 4.253257 GAGTAGCGGTCGAGGCGG 62.253 72.222 0.00 0.00 35.00 6.13
1635 1811 2.671963 GCCAAACCCCTGTCGTCC 60.672 66.667 0.00 0.00 0.00 4.79
1777 1971 2.202987 CACCTCGATGAGCCAGCC 60.203 66.667 0.00 0.00 0.00 4.85
1854 2048 0.962489 CGCTGTCCGGGAGATAGAAT 59.038 55.000 0.00 0.00 35.81 2.40
1866 2060 2.486966 GCAAATGAGGCGCTGTCC 59.513 61.111 7.64 0.00 0.00 4.02
1950 2144 6.610741 ATCGACAAGAATTCTTCCAATAGC 57.389 37.500 17.91 2.39 33.11 2.97
1979 2174 6.419484 TCATGGTAACTTCTGAACTCTGAA 57.581 37.500 0.00 0.00 37.61 3.02
1980 2175 6.211384 TCATCATGGTAACTTCTGAACTCTGA 59.789 38.462 0.00 0.00 37.61 3.27
1981 2176 6.401394 TCATCATGGTAACTTCTGAACTCTG 58.599 40.000 0.00 0.00 37.61 3.35
1982 2177 6.611613 TCATCATGGTAACTTCTGAACTCT 57.388 37.500 0.00 0.00 37.61 3.24
1983 2178 7.856145 AATCATCATGGTAACTTCTGAACTC 57.144 36.000 0.00 0.00 37.61 3.01
1984 2179 9.553064 GATAATCATCATGGTAACTTCTGAACT 57.447 33.333 0.00 0.00 37.61 3.01
1985 2180 9.553064 AGATAATCATCATGGTAACTTCTGAAC 57.447 33.333 0.00 0.00 33.21 3.18
2063 2275 1.157870 ACACGGCTTTCGAACCAGTG 61.158 55.000 19.48 19.48 42.43 3.66
2088 2300 0.606673 GGTGAGGGCAGTGAGTTTCC 60.607 60.000 0.00 0.00 0.00 3.13
2151 2367 5.739752 TCAGATATCGCAAATCAAACCAG 57.260 39.130 0.00 0.00 0.00 4.00
2158 2374 7.020010 GTCCATGATTTCAGATATCGCAAATC 58.980 38.462 22.95 22.95 36.28 2.17
2199 2415 4.012374 AGACACAACCTAAGATGGCATTG 58.988 43.478 0.00 0.00 0.00 2.82
2263 2483 2.702751 TTCGAAAGAAGTCGCCGCCA 62.703 55.000 0.00 0.00 46.92 5.69
2418 2641 4.829492 AGCAAATCAACTTAAGCTGGAGTT 59.171 37.500 1.29 8.70 36.58 3.01
2425 2648 6.147821 TGAGTACTGAGCAAATCAACTTAAGC 59.852 38.462 0.00 0.00 37.52 3.09
2447 2672 7.139392 CCAATGCAATAAGATGACAGAATGAG 58.861 38.462 0.00 0.00 39.69 2.90
2480 2705 7.798052 GGCATTACAATCAAATGAAAACACAAC 59.202 33.333 0.18 0.00 36.61 3.32
2490 5547 6.700081 CCATTCAGAGGCATTACAATCAAATG 59.300 38.462 0.00 0.00 37.39 2.32
2568 5626 2.475466 CCCGCACATGGTCAGATGC 61.475 63.158 0.00 0.00 34.66 3.91
2675 5733 5.240403 AGAGCTAGCTTTCCTCAACAAAAAG 59.760 40.000 20.42 0.00 34.00 2.27
2690 5754 5.208121 AGAAGTTTATGGAGAGAGCTAGCT 58.792 41.667 19.45 19.45 0.00 3.32
2711 5775 5.648247 ACCAAACTGGGAGTAACTAGTAGA 58.352 41.667 3.59 0.00 43.37 2.59
2717 5781 2.781174 TGGAACCAAACTGGGAGTAACT 59.219 45.455 0.00 0.00 43.37 2.24
2795 5859 9.783081 AACTTGCTGAGAATTATTTTTCCATTT 57.217 25.926 0.00 0.00 0.00 2.32
2895 5961 7.032598 ACAATATAACAAGCTATAGGGCCAT 57.967 36.000 6.18 0.00 0.00 4.40
2896 5962 6.448369 ACAATATAACAAGCTATAGGGCCA 57.552 37.500 6.18 0.00 0.00 5.36
2949 6015 6.754702 ATCATATGCTGATCCTTAACATGC 57.245 37.500 0.00 0.00 40.77 4.06
2962 6028 7.013369 AGCCTAATGCATCAATATCATATGCTG 59.987 37.037 0.00 0.00 44.96 4.41
2982 6049 3.435026 GGGTTGCCTCATTGATAGCCTAA 60.435 47.826 6.41 0.00 0.00 2.69
3013 6080 7.489113 CCCTTCAATACTTGTTGCATACAAATC 59.511 37.037 13.10 0.00 45.69 2.17
3032 6099 4.665009 AGCAGGACATTATATCCCCTTCAA 59.335 41.667 0.00 0.00 36.86 2.69
3091 6164 2.125350 GACTCGAGGGCAGGCTTG 60.125 66.667 18.41 0.00 0.00 4.01
3103 6176 2.434359 GAAACCGCCCCTGACTCG 60.434 66.667 0.00 0.00 0.00 4.18
3105 6178 1.789576 AATGGAAACCGCCCCTGACT 61.790 55.000 0.00 0.00 0.00 3.41
3107 6180 0.610785 GAAATGGAAACCGCCCCTGA 60.611 55.000 0.00 0.00 0.00 3.86
3108 6181 0.611896 AGAAATGGAAACCGCCCCTG 60.612 55.000 0.00 0.00 0.00 4.45
3109 6182 0.996583 TAGAAATGGAAACCGCCCCT 59.003 50.000 0.00 0.00 0.00 4.79
3110 6183 1.681264 CATAGAAATGGAAACCGCCCC 59.319 52.381 0.00 0.00 0.00 5.80
3114 6193 5.059404 ACTTTGCATAGAAATGGAAACCG 57.941 39.130 11.39 0.00 45.21 4.44
3140 6227 7.168972 TGACATAAAATTAACACTTGCAGTTGC 59.831 33.333 0.00 0.00 42.50 4.17
3144 6231 8.164153 GCAATGACATAAAATTAACACTTGCAG 58.836 33.333 0.00 0.00 35.43 4.41
3161 6248 8.479689 TCATAAGAAATTTCATGGCAATGACAT 58.520 29.630 19.99 0.00 42.60 3.06
3162 6249 7.838884 TCATAAGAAATTTCATGGCAATGACA 58.161 30.769 19.99 0.00 42.60 3.58
3163 6250 8.882415 ATCATAAGAAATTTCATGGCAATGAC 57.118 30.769 19.99 0.00 42.60 3.06
3169 6256 6.963796 ACGAGATCATAAGAAATTTCATGGC 58.036 36.000 19.99 10.96 0.00 4.40
3170 6257 9.869844 GTAACGAGATCATAAGAAATTTCATGG 57.130 33.333 19.99 6.85 0.00 3.66
3176 6263 9.823647 ACATCTGTAACGAGATCATAAGAAATT 57.176 29.630 0.00 0.00 29.72 1.82
3180 6267 9.899226 CAATACATCTGTAACGAGATCATAAGA 57.101 33.333 0.00 0.00 33.76 2.10
3181 6268 8.642885 GCAATACATCTGTAACGAGATCATAAG 58.357 37.037 0.00 0.00 33.76 1.73
3183 6270 7.886338 AGCAATACATCTGTAACGAGATCATA 58.114 34.615 0.00 0.00 33.76 2.15
3184 6271 6.753180 AGCAATACATCTGTAACGAGATCAT 58.247 36.000 0.00 0.00 33.76 2.45
3185 6272 6.149129 AGCAATACATCTGTAACGAGATCA 57.851 37.500 0.00 0.00 33.76 2.92
3186 6273 7.327275 CCTTAGCAATACATCTGTAACGAGATC 59.673 40.741 0.00 0.00 33.76 2.75
3187 6274 7.148641 CCTTAGCAATACATCTGTAACGAGAT 58.851 38.462 0.00 0.00 33.76 2.75
3189 6276 5.692204 CCCTTAGCAATACATCTGTAACGAG 59.308 44.000 0.00 0.00 33.76 4.18
3190 6277 5.128171 ACCCTTAGCAATACATCTGTAACGA 59.872 40.000 0.00 0.00 33.76 3.85
3192 6279 7.120726 ACAAACCCTTAGCAATACATCTGTAAC 59.879 37.037 0.00 0.00 33.76 2.50
3194 6281 6.597672 CACAAACCCTTAGCAATACATCTGTA 59.402 38.462 0.00 0.00 34.67 2.74
3195 6282 5.415701 CACAAACCCTTAGCAATACATCTGT 59.584 40.000 0.00 0.00 0.00 3.41
3196 6283 5.415701 ACACAAACCCTTAGCAATACATCTG 59.584 40.000 0.00 0.00 0.00 2.90
3198 6285 5.393027 CCACACAAACCCTTAGCAATACATC 60.393 44.000 0.00 0.00 0.00 3.06
3199 6286 4.462483 CCACACAAACCCTTAGCAATACAT 59.538 41.667 0.00 0.00 0.00 2.29
3201 6288 3.366985 GCCACACAAACCCTTAGCAATAC 60.367 47.826 0.00 0.00 0.00 1.89
3202 6289 2.823154 GCCACACAAACCCTTAGCAATA 59.177 45.455 0.00 0.00 0.00 1.90
3203 6290 1.618343 GCCACACAAACCCTTAGCAAT 59.382 47.619 0.00 0.00 0.00 3.56
3204 6291 1.036707 GCCACACAAACCCTTAGCAA 58.963 50.000 0.00 0.00 0.00 3.91
3205 6292 1.169661 CGCCACACAAACCCTTAGCA 61.170 55.000 0.00 0.00 0.00 3.49
3206 6293 1.170290 ACGCCACACAAACCCTTAGC 61.170 55.000 0.00 0.00 0.00 3.09
3207 6294 0.872388 GACGCCACACAAACCCTTAG 59.128 55.000 0.00 0.00 0.00 2.18
3208 6295 0.535553 GGACGCCACACAAACCCTTA 60.536 55.000 0.00 0.00 0.00 2.69
3209 6296 1.826487 GGACGCCACACAAACCCTT 60.826 57.895 0.00 0.00 0.00 3.95
3210 6297 2.203294 GGACGCCACACAAACCCT 60.203 61.111 0.00 0.00 0.00 4.34
3211 6298 2.203294 AGGACGCCACACAAACCC 60.203 61.111 0.00 0.00 0.00 4.11
3212 6299 3.030652 CAGGACGCCACACAAACC 58.969 61.111 0.00 0.00 0.00 3.27
3213 6300 1.999071 TTGCAGGACGCCACACAAAC 61.999 55.000 0.00 0.00 41.33 2.93
3214 6301 1.106351 ATTGCAGGACGCCACACAAA 61.106 50.000 0.00 0.00 41.33 2.83
3238 6328 3.012518 CAAGTCTAACCAAGCCAGATGG 58.987 50.000 0.00 0.00 43.84 3.51
3239 6329 3.942829 TCAAGTCTAACCAAGCCAGATG 58.057 45.455 0.00 0.00 0.00 2.90
3240 6330 4.042187 ACTTCAAGTCTAACCAAGCCAGAT 59.958 41.667 0.00 0.00 0.00 2.90
3241 6331 3.391296 ACTTCAAGTCTAACCAAGCCAGA 59.609 43.478 0.00 0.00 0.00 3.86
3242 6332 3.744660 ACTTCAAGTCTAACCAAGCCAG 58.255 45.455 0.00 0.00 0.00 4.85
3243 6333 3.135712 TGACTTCAAGTCTAACCAAGCCA 59.864 43.478 18.49 0.00 45.27 4.75
3244 6334 3.740115 TGACTTCAAGTCTAACCAAGCC 58.260 45.455 18.49 0.00 45.27 4.35
3245 6335 5.751243 TTTGACTTCAAGTCTAACCAAGC 57.249 39.130 18.49 0.00 45.27 4.01
3246 6336 7.363431 GGATTTTGACTTCAAGTCTAACCAAG 58.637 38.462 18.49 0.00 45.27 3.61
3251 6341 6.601332 ACAGGGATTTTGACTTCAAGTCTAA 58.399 36.000 18.49 14.16 45.27 2.10
3252 6342 6.187727 ACAGGGATTTTGACTTCAAGTCTA 57.812 37.500 18.49 8.39 45.27 2.59
3278 6376 9.268268 TGTCGAAAAAGAAGATAAACATACTGT 57.732 29.630 0.00 0.00 0.00 3.55
3283 6381 9.884465 CTCTTTGTCGAAAAAGAAGATAAACAT 57.116 29.630 26.67 0.00 43.67 2.71
3284 6382 8.889717 ACTCTTTGTCGAAAAAGAAGATAAACA 58.110 29.630 26.67 6.26 43.67 2.83
3288 6386 9.706691 ACATACTCTTTGTCGAAAAAGAAGATA 57.293 29.630 26.67 19.79 43.67 1.98
3289 6387 8.608844 ACATACTCTTTGTCGAAAAAGAAGAT 57.391 30.769 26.67 20.07 43.67 2.40
3290 6388 8.433421 AACATACTCTTTGTCGAAAAAGAAGA 57.567 30.769 26.67 18.96 43.67 2.87
3297 6395 9.706691 AGAAGATAAACATACTCTTTGTCGAAA 57.293 29.630 0.00 0.00 29.64 3.46
3298 6396 9.355215 GAGAAGATAAACATACTCTTTGTCGAA 57.645 33.333 0.00 0.00 29.64 3.71
3299 6397 8.740906 AGAGAAGATAAACATACTCTTTGTCGA 58.259 33.333 0.00 0.00 31.93 4.20
3300 6398 8.918961 AGAGAAGATAAACATACTCTTTGTCG 57.081 34.615 0.00 0.00 31.93 4.35
3304 6402 9.771534 GGCATAGAGAAGATAAACATACTCTTT 57.228 33.333 0.00 0.00 36.39 2.52
3305 6403 9.153479 AGGCATAGAGAAGATAAACATACTCTT 57.847 33.333 0.00 0.00 36.39 2.85
3306 6404 8.719645 AGGCATAGAGAAGATAAACATACTCT 57.280 34.615 0.00 0.00 38.15 3.24
3307 6405 9.771534 AAAGGCATAGAGAAGATAAACATACTC 57.228 33.333 0.00 0.00 0.00 2.59
3324 6422 6.827586 TGTTAACCCTACAAAAAGGCATAG 57.172 37.500 2.48 0.00 35.09 2.23
3339 6437 7.881775 ACCTGAAAATCTCATATGTTAACCC 57.118 36.000 2.48 0.00 32.14 4.11
3340 6438 9.788960 GAAACCTGAAAATCTCATATGTTAACC 57.211 33.333 2.48 0.00 32.14 2.85
3386 6484 2.475487 GTCTGTACGCAAGACAAACTCC 59.525 50.000 6.90 0.00 43.62 3.85
3395 6493 1.272490 TCAGGGAAGTCTGTACGCAAG 59.728 52.381 0.00 0.00 38.58 4.01
3432 6531 1.699634 ACATATTGATCCTCCACGGGG 59.300 52.381 0.00 0.00 0.00 5.73
3464 6568 2.951642 TGTCCCTTCAGCTGAAACAAAG 59.048 45.455 28.16 16.77 33.07 2.77
3525 6629 7.119709 TGATTTTCTCCCATCTTATACGACA 57.880 36.000 0.00 0.00 0.00 4.35
3546 6656 3.742369 CGTTGTTTACACGGTACCTTGAT 59.258 43.478 24.14 11.18 0.00 2.57
3555 6665 3.863396 TCATGTTCGTTGTTTACACGG 57.137 42.857 0.00 0.00 0.00 4.94
3568 6678 5.633830 TGGCAAGAGAGAAAATCATGTTC 57.366 39.130 0.00 0.00 0.00 3.18
3596 6742 9.624697 TTACAAGACATTGAAAGCATTTGATAC 57.375 29.630 0.00 0.00 39.27 2.24
3604 6750 5.468409 TCGACATTACAAGACATTGAAAGCA 59.532 36.000 0.00 0.00 38.83 3.91
3626 6772 5.998454 AGCATCAAGGACAATCTAAATCG 57.002 39.130 0.00 0.00 0.00 3.34
3645 6791 2.284754 TTGGAACCACATAGCAAGCA 57.715 45.000 0.00 0.00 0.00 3.91
3646 6792 3.874392 ATTTGGAACCACATAGCAAGC 57.126 42.857 0.00 0.00 0.00 4.01
3647 6793 7.546358 TGATAAATTTGGAACCACATAGCAAG 58.454 34.615 0.00 0.00 0.00 4.01
3648 6794 7.473735 TGATAAATTTGGAACCACATAGCAA 57.526 32.000 0.00 0.00 0.00 3.91
3649 6795 6.405731 GCTGATAAATTTGGAACCACATAGCA 60.406 38.462 0.00 1.81 0.00 3.49
3650 6796 5.979517 GCTGATAAATTTGGAACCACATAGC 59.020 40.000 0.00 0.00 0.00 2.97
3651 6797 7.338800 AGCTGATAAATTTGGAACCACATAG 57.661 36.000 0.00 0.00 0.00 2.23
3652 6798 7.716799 AAGCTGATAAATTTGGAACCACATA 57.283 32.000 0.00 0.00 0.00 2.29
3653 6799 6.610075 AAGCTGATAAATTTGGAACCACAT 57.390 33.333 0.00 0.00 0.00 3.21
3698 6853 6.974932 AGACATAGCACATAAAGTTCAGTG 57.025 37.500 0.00 0.00 35.19 3.66
3702 6857 9.098355 TCACAATAGACATAGCACATAAAGTTC 57.902 33.333 0.00 0.00 0.00 3.01
3705 6860 8.654230 AGTCACAATAGACATAGCACATAAAG 57.346 34.615 0.00 0.00 40.98 1.85
3710 6865 5.793817 ACAAGTCACAATAGACATAGCACA 58.206 37.500 0.00 0.00 40.98 4.57
3716 6871 5.707298 CAGGGAAACAAGTCACAATAGACAT 59.293 40.000 0.00 0.00 40.98 3.06
3726 6881 1.152830 GGCCCAGGGAAACAAGTCA 59.847 57.895 10.89 0.00 0.00 3.41
3741 6904 5.163612 GGACAAACTCTCTCATAAAATGGCC 60.164 44.000 0.00 0.00 0.00 5.36
3744 6907 8.239998 GGAAAGGACAAACTCTCTCATAAAATG 58.760 37.037 0.00 0.00 0.00 2.32
3756 6919 3.895041 TCCCATTTGGAAAGGACAAACTC 59.105 43.478 0.00 0.00 41.40 3.01
3770 6967 0.906775 AAGCCAGCCATTCCCATTTG 59.093 50.000 0.00 0.00 0.00 2.32
3799 6996 9.791801 TGCATTAGCTTACCTATTCATATTCAA 57.208 29.630 0.00 0.00 42.74 2.69
3807 7004 8.091449 AGTATGAGTGCATTAGCTTACCTATTC 58.909 37.037 0.00 0.00 42.74 1.75
3817 7014 5.461032 ACTCCTAGTATGAGTGCATTAGC 57.539 43.478 7.24 0.00 41.40 3.09
3831 7044 0.971447 GAAGGGCCGACACTCCTAGT 60.971 60.000 0.00 0.00 0.00 2.57
3844 7057 3.139077 TCTTGAAAAGTCGAAGAAGGGC 58.861 45.455 0.00 0.00 46.34 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.