Multiple sequence alignment - TraesCS2A01G449700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G449700 chr2A 100.000 2333 0 0 1 2333 699571247 699568915 0.000000e+00 4309.0
1 TraesCS2A01G449700 chr2A 88.312 231 21 6 1000 1227 699575497 699575270 2.950000e-69 272.0
2 TraesCS2A01G449700 chr2A 97.826 46 1 0 1717 1762 699569485 699569440 1.920000e-11 80.5
3 TraesCS2A01G449700 chr2A 97.826 46 1 0 1763 1808 699569531 699569486 1.920000e-11 80.5
4 TraesCS2A01G449700 chr2D 87.892 1115 80 21 657 1762 558965345 558964277 0.000000e+00 1260.0
5 TraesCS2A01G449700 chr2D 94.247 365 17 4 55 416 558966029 558965666 2.620000e-154 555.0
6 TraesCS2A01G449700 chr2D 96.371 248 7 2 399 645 558965650 558965404 7.760000e-110 407.0
7 TraesCS2A01G449700 chr2D 80.899 356 44 19 1000 1334 558969655 558969303 2.300000e-65 259.0
8 TraesCS2A01G449700 chr2D 100.000 59 0 0 1847 1905 558964271 558964213 2.450000e-20 110.0
9 TraesCS2A01G449700 chr2D 96.078 51 2 0 6 56 558966557 558966507 1.490000e-12 84.2
10 TraesCS2A01G449700 chr2B 92.398 684 36 7 677 1352 668030372 668029697 0.000000e+00 961.0
11 TraesCS2A01G449700 chr2B 96.386 166 6 0 316 481 668030547 668030382 8.210000e-70 274.0
12 TraesCS2A01G449700 chr2B 86.017 236 23 8 998 1228 668048102 668047872 6.440000e-61 244.0
13 TraesCS2A01G449700 chr2B 88.430 121 10 2 1448 1567 668029053 668028936 2.420000e-30 143.0
14 TraesCS2A01G449700 chr1B 84.362 486 55 7 60 525 656149165 656149649 7.600000e-125 457.0
15 TraesCS2A01G449700 chrUn 93.878 49 3 0 1 49 1257412 1257460 8.940000e-10 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G449700 chr2A 699568915 699571247 2332 True 1490.000000 4309 98.550667 1 2333 3 chr2A.!!$R2 2332
1 TraesCS2A01G449700 chr2D 558964213 558969655 5442 True 445.866667 1260 92.581167 6 1905 6 chr2D.!!$R1 1899
2 TraesCS2A01G449700 chr2B 668028936 668030547 1611 True 459.333333 961 92.404667 316 1567 3 chr2B.!!$R2 1251

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
887 4553 0.25589 AGCGCCTACAAATCCACCAT 59.744 50.0 2.29 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2171 6464 0.038618 GTTTGATTTGCGGGGGACAC 60.039 55.0 0.0 0.0 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 3136 3.997021 GTGTAGAGGAGAAACATGTGTGG 59.003 47.826 0.00 0.00 0.00 4.17
86 3659 8.871629 TTGCCTTGGTTACTCAATTTATAAGA 57.128 30.769 0.00 0.00 0.00 2.10
93 3666 8.773645 TGGTTACTCAATTTATAAGATGATGCG 58.226 33.333 3.57 0.00 0.00 4.73
163 3736 9.146984 TCTAAACTGTATGGTTCTTACATTTCG 57.853 33.333 0.00 0.00 0.00 3.46
180 3753 6.222389 ACATTTCGAAAAATCATGCCTTCAA 58.778 32.000 15.66 0.00 32.69 2.69
194 3767 3.250762 TGCCTTCAAGTTTCTCGAACATG 59.749 43.478 0.00 0.00 40.84 3.21
208 3781 8.777865 TTCTCGAACATGTTTAGAGAAATGAT 57.222 30.769 33.86 7.53 40.31 2.45
212 3785 9.653287 TCGAACATGTTTAGAGAAATGATAACT 57.347 29.630 13.36 0.00 0.00 2.24
225 3798 8.930846 AGAAATGATAACTTCCATTATCTGGG 57.069 34.615 6.97 0.00 45.98 4.45
228 3803 9.492730 AAATGATAACTTCCATTATCTGGGTTT 57.507 29.630 6.97 2.21 45.98 3.27
235 3810 7.652554 ACTTCCATTATCTGGGTTTTAGGAAT 58.347 34.615 0.00 0.00 45.98 3.01
285 3860 1.075525 TGGCTCGCCCCATACTAGT 60.076 57.895 5.33 0.00 34.56 2.57
287 3862 1.203137 TGGCTCGCCCCATACTAGTAT 60.203 52.381 9.71 9.71 34.56 2.12
313 3889 5.451937 CCAATTAGGACAGTAAGCTCGATCA 60.452 44.000 0.00 0.00 41.22 2.92
363 3940 4.133078 AGGAAGCTGAAGAACAAAGACAG 58.867 43.478 0.00 0.00 0.00 3.51
525 4135 4.112634 GAGATCGTCCGAAATCAATGTGA 58.887 43.478 0.00 0.00 0.00 3.58
538 4148 3.963129 TCAATGTGACACCCCCTATTTC 58.037 45.455 2.45 0.00 0.00 2.17
563 4173 8.581578 TCCAGAGAAATAATTACAAACCAAACC 58.418 33.333 0.00 0.00 0.00 3.27
698 4356 4.025401 CGCACAGGCCCAACGTTC 62.025 66.667 0.00 0.00 36.38 3.95
699 4357 4.025401 GCACAGGCCCAACGTTCG 62.025 66.667 0.00 0.00 0.00 3.95
887 4553 0.255890 AGCGCCTACAAATCCACCAT 59.744 50.000 2.29 0.00 0.00 3.55
900 4566 0.911769 CCACCATACCCAAGAGCTCA 59.088 55.000 17.77 0.00 0.00 4.26
901 4567 1.407437 CCACCATACCCAAGAGCTCAC 60.407 57.143 17.77 0.00 0.00 3.51
902 4568 0.537188 ACCATACCCAAGAGCTCACG 59.463 55.000 17.77 5.92 0.00 4.35
903 4569 0.537188 CCATACCCAAGAGCTCACGT 59.463 55.000 17.77 8.26 0.00 4.49
907 4573 0.603569 ACCCAAGAGCTCACGTACAG 59.396 55.000 17.77 0.02 0.00 2.74
918 4584 3.579709 CTCACGTACAGAAGCAAGACAT 58.420 45.455 0.00 0.00 0.00 3.06
923 4589 1.800805 ACAGAAGCAAGACATCCACG 58.199 50.000 0.00 0.00 0.00 4.94
948 4614 4.279145 AGAACTATATCCACACGACCAGT 58.721 43.478 0.00 0.00 0.00 4.00
985 4651 1.452833 GAGGCAGCCATTGGAGGAC 60.453 63.158 15.80 0.00 0.00 3.85
1006 4678 1.350193 GACACACTACACGATGCAGG 58.650 55.000 0.00 0.00 0.00 4.85
1189 4861 0.747283 GCAGATGCACCAGGAGAAGG 60.747 60.000 0.00 0.00 41.59 3.46
1190 4862 0.747283 CAGATGCACCAGGAGAAGGC 60.747 60.000 0.00 0.00 0.00 4.35
1191 4863 1.452833 GATGCACCAGGAGAAGGCC 60.453 63.158 0.00 0.00 0.00 5.19
1192 4864 3.335356 ATGCACCAGGAGAAGGCCG 62.335 63.158 0.00 0.00 0.00 6.13
1193 4865 3.706373 GCACCAGGAGAAGGCCGA 61.706 66.667 0.00 0.00 0.00 5.54
1194 4866 2.581354 CACCAGGAGAAGGCCGAG 59.419 66.667 0.00 0.00 0.00 4.63
1195 4867 3.394836 ACCAGGAGAAGGCCGAGC 61.395 66.667 0.00 0.00 0.00 5.03
1196 4868 3.393970 CCAGGAGAAGGCCGAGCA 61.394 66.667 0.00 0.00 0.00 4.26
1197 4869 2.125350 CAGGAGAAGGCCGAGCAC 60.125 66.667 0.00 0.00 0.00 4.40
1198 4870 3.394836 AGGAGAAGGCCGAGCACC 61.395 66.667 0.00 0.00 0.00 5.01
1199 4871 4.821589 GGAGAAGGCCGAGCACCG 62.822 72.222 0.00 0.00 38.18 4.94
1337 5021 4.521256 GGCGGAGAAGTACATCTAGAGATT 59.479 45.833 0.00 0.00 31.21 2.40
1339 5023 5.009210 GCGGAGAAGTACATCTAGAGATTGT 59.991 44.000 0.00 0.30 31.21 2.71
1340 5024 6.434596 CGGAGAAGTACATCTAGAGATTGTG 58.565 44.000 0.00 0.00 31.21 3.33
1357 5041 1.001760 TGAGGGGAGCAGGGTCTAC 59.998 63.158 0.00 0.00 0.00 2.59
1399 5692 2.411748 CGTCAGTCGTACGTAGTTGGTA 59.588 50.000 16.05 0.00 45.11 3.25
1403 5696 3.058983 CAGTCGTACGTAGTTGGTACACA 60.059 47.826 16.05 0.00 37.78 3.72
1434 5727 2.045536 TGCATGCACGCCCATGTA 60.046 55.556 18.46 9.40 43.46 2.29
1443 5736 0.391597 ACGCCCATGTACCGGAATAG 59.608 55.000 9.46 0.00 0.00 1.73
1455 5748 6.163476 TGTACCGGAATAGAATGTATCATGC 58.837 40.000 9.46 0.00 0.00 4.06
1483 5776 2.271800 GGTGCCTTCGATGTTCTAGTG 58.728 52.381 0.00 0.00 0.00 2.74
1551 5844 4.099573 TCTTTCTTAGGGCATCTCTAACGG 59.900 45.833 0.00 0.00 0.00 4.44
1566 5859 3.896888 TCTAACGGACCCTCAAAACACTA 59.103 43.478 0.00 0.00 0.00 2.74
1577 5870 5.051816 CCTCAAAACACTAGTAAACGTCCA 58.948 41.667 0.00 0.00 0.00 4.02
1595 5888 1.456892 AGACCACACACGTCCCTCA 60.457 57.895 0.00 0.00 0.00 3.86
1605 5898 0.464916 ACGTCCCTCAAAACACCCAC 60.465 55.000 0.00 0.00 0.00 4.61
1609 5902 2.698274 GTCCCTCAAAACACCCACAAAT 59.302 45.455 0.00 0.00 0.00 2.32
1610 5903 2.697751 TCCCTCAAAACACCCACAAATG 59.302 45.455 0.00 0.00 0.00 2.32
1611 5904 2.433970 CCCTCAAAACACCCACAAATGT 59.566 45.455 0.00 0.00 0.00 2.71
1612 5905 3.118445 CCCTCAAAACACCCACAAATGTT 60.118 43.478 0.00 0.00 40.76 2.71
1613 5906 4.100189 CCCTCAAAACACCCACAAATGTTA 59.900 41.667 0.00 0.00 38.08 2.41
1614 5907 5.288804 CCTCAAAACACCCACAAATGTTAG 58.711 41.667 0.00 0.00 38.08 2.34
1615 5908 5.269505 TCAAAACACCCACAAATGTTAGG 57.730 39.130 0.00 0.00 38.08 2.69
1618 5911 2.500229 ACACCCACAAATGTTAGGACG 58.500 47.619 6.42 0.00 0.00 4.79
1619 5912 2.158726 ACACCCACAAATGTTAGGACGT 60.159 45.455 6.42 0.00 0.00 4.34
1621 5914 3.682858 CACCCACAAATGTTAGGACGTAG 59.317 47.826 6.42 0.00 0.00 3.51
1622 5915 8.591919 AACACCCACAAATGTTAGGACGTAGT 62.592 42.308 6.42 0.00 39.85 2.73
1623 5916 9.952846 AACACCCACAAATGTTAGGACGTAGTT 62.953 40.741 6.42 0.00 37.97 2.24
1635 5928 2.094762 ACGTAGTTTGCCATCCAGAC 57.905 50.000 0.00 0.00 37.78 3.51
1636 5929 1.623811 ACGTAGTTTGCCATCCAGACT 59.376 47.619 0.00 0.00 37.78 3.24
1637 5930 2.002586 CGTAGTTTGCCATCCAGACTG 58.997 52.381 0.00 0.00 39.09 3.51
1638 5931 1.740025 GTAGTTTGCCATCCAGACTGC 59.260 52.381 0.00 0.00 39.09 4.40
1639 5932 0.957395 AGTTTGCCATCCAGACTGCG 60.957 55.000 0.00 0.00 37.49 5.18
1645 5938 0.460987 CCATCCAGACTGCGGAGTTC 60.461 60.000 12.08 4.70 35.56 3.01
1649 5942 0.534412 CCAGACTGCGGAGTTCAGAT 59.466 55.000 12.08 0.00 35.61 2.90
1656 5949 3.182967 CTGCGGAGTTCAGATGTAGTTC 58.817 50.000 0.00 0.00 33.54 3.01
1662 5955 4.184629 GAGTTCAGATGTAGTTCGCCATT 58.815 43.478 0.00 0.00 0.00 3.16
1673 5966 3.333414 CGCCATTCGATGCGGATT 58.667 55.556 14.44 0.00 46.65 3.01
1685 5978 4.634004 TCGATGCGGATTTTAATTGTCTGT 59.366 37.500 0.00 0.00 0.00 3.41
1696 5989 9.683069 GATTTTAATTGTCTGTGAACATGTTCT 57.317 29.630 32.57 15.91 40.14 3.01
1711 6004 5.099575 ACATGTTCTTGTGTTCGGTTTTTC 58.900 37.500 0.00 0.00 0.00 2.29
1712 6005 5.105917 ACATGTTCTTGTGTTCGGTTTTTCT 60.106 36.000 0.00 0.00 0.00 2.52
1719 6012 4.109050 TGTGTTCGGTTTTTCTGCAAATC 58.891 39.130 0.00 0.00 0.00 2.17
1721 6014 3.065510 TGTTCGGTTTTTCTGCAAATCGA 59.934 39.130 0.18 0.18 45.31 3.59
1748 6041 5.279456 GCAAATCAGGGGATGTTTACAGTTT 60.279 40.000 0.00 0.00 32.92 2.66
1767 6060 8.522178 ACAGTTTTTGTGTTTGTTTTAATCGA 57.478 26.923 0.00 0.00 38.99 3.59
1768 6061 8.979574 ACAGTTTTTGTGTTTGTTTTAATCGAA 58.020 25.926 0.00 0.00 38.99 3.71
1769 6062 9.965748 CAGTTTTTGTGTTTGTTTTAATCGAAT 57.034 25.926 0.00 0.00 0.00 3.34
1770 6063 9.965748 AGTTTTTGTGTTTGTTTTAATCGAATG 57.034 25.926 0.00 0.00 0.00 2.67
1771 6064 8.720586 GTTTTTGTGTTTGTTTTAATCGAATGC 58.279 29.630 0.00 0.00 0.00 3.56
1772 6065 7.525688 TTTGTGTTTGTTTTAATCGAATGCA 57.474 28.000 0.00 0.00 0.00 3.96
1773 6066 7.525688 TTGTGTTTGTTTTAATCGAATGCAA 57.474 28.000 0.00 0.00 0.00 4.08
1774 6067 7.525688 TGTGTTTGTTTTAATCGAATGCAAA 57.474 28.000 0.00 0.00 0.00 3.68
1775 6068 8.136057 TGTGTTTGTTTTAATCGAATGCAAAT 57.864 26.923 0.00 0.00 0.00 2.32
1776 6069 8.272176 TGTGTTTGTTTTAATCGAATGCAAATC 58.728 29.630 0.00 0.00 0.00 2.17
1777 6070 8.272176 GTGTTTGTTTTAATCGAATGCAAATCA 58.728 29.630 0.00 0.00 0.00 2.57
1778 6071 8.486383 TGTTTGTTTTAATCGAATGCAAATCAG 58.514 29.630 0.00 0.00 0.00 2.90
1779 6072 7.579589 TTGTTTTAATCGAATGCAAATCAGG 57.420 32.000 0.00 0.00 0.00 3.86
1780 6073 6.098679 TGTTTTAATCGAATGCAAATCAGGG 58.901 36.000 0.00 0.00 0.00 4.45
1781 6074 4.916983 TTAATCGAATGCAAATCAGGGG 57.083 40.909 0.00 0.00 0.00 4.79
1782 6075 2.734755 ATCGAATGCAAATCAGGGGA 57.265 45.000 0.00 0.00 0.00 4.81
1783 6076 2.734755 TCGAATGCAAATCAGGGGAT 57.265 45.000 0.00 0.00 34.43 3.85
1784 6077 2.300433 TCGAATGCAAATCAGGGGATG 58.700 47.619 0.00 0.00 32.92 3.51
1785 6078 2.026641 CGAATGCAAATCAGGGGATGT 58.973 47.619 0.00 0.00 32.92 3.06
1786 6079 2.428171 CGAATGCAAATCAGGGGATGTT 59.572 45.455 0.00 0.00 32.92 2.71
1787 6080 3.119029 CGAATGCAAATCAGGGGATGTTT 60.119 43.478 0.00 0.00 32.92 2.83
1788 6081 4.097741 CGAATGCAAATCAGGGGATGTTTA 59.902 41.667 0.00 0.00 32.92 2.01
1789 6082 5.343307 AATGCAAATCAGGGGATGTTTAC 57.657 39.130 0.00 0.00 32.92 2.01
1790 6083 3.772387 TGCAAATCAGGGGATGTTTACA 58.228 40.909 0.00 0.00 32.92 2.41
1791 6084 3.763360 TGCAAATCAGGGGATGTTTACAG 59.237 43.478 0.00 0.00 32.92 2.74
1792 6085 3.429410 GCAAATCAGGGGATGTTTACAGC 60.429 47.826 0.00 0.00 32.92 4.40
1793 6086 4.019174 CAAATCAGGGGATGTTTACAGCT 58.981 43.478 0.00 0.00 32.92 4.24
1794 6087 4.322057 AATCAGGGGATGTTTACAGCTT 57.678 40.909 0.00 0.00 32.92 3.74
1795 6088 3.806949 TCAGGGGATGTTTACAGCTTT 57.193 42.857 0.00 0.00 31.98 3.51
1796 6089 4.112634 TCAGGGGATGTTTACAGCTTTT 57.887 40.909 0.00 0.00 31.98 2.27
1797 6090 3.826157 TCAGGGGATGTTTACAGCTTTTG 59.174 43.478 0.00 0.00 31.98 2.44
1798 6091 3.573967 CAGGGGATGTTTACAGCTTTTGT 59.426 43.478 0.00 0.00 43.96 2.83
1799 6092 3.573967 AGGGGATGTTTACAGCTTTTGTG 59.426 43.478 0.00 0.00 41.10 3.33
1800 6093 3.320826 GGGGATGTTTACAGCTTTTGTGT 59.679 43.478 0.00 0.00 41.10 3.72
1801 6094 4.202212 GGGGATGTTTACAGCTTTTGTGTT 60.202 41.667 0.00 0.00 41.10 3.32
1802 6095 5.356426 GGGATGTTTACAGCTTTTGTGTTT 58.644 37.500 0.00 0.00 41.10 2.83
1803 6096 5.234116 GGGATGTTTACAGCTTTTGTGTTTG 59.766 40.000 0.00 0.00 41.10 2.93
1804 6097 5.810074 GGATGTTTACAGCTTTTGTGTTTGT 59.190 36.000 0.00 0.00 41.10 2.83
1805 6098 6.312672 GGATGTTTACAGCTTTTGTGTTTGTT 59.687 34.615 0.00 0.00 41.10 2.83
1806 6099 7.148490 GGATGTTTACAGCTTTTGTGTTTGTTT 60.148 33.333 0.00 0.00 41.10 2.83
1807 6100 7.484035 TGTTTACAGCTTTTGTGTTTGTTTT 57.516 28.000 0.00 0.00 41.10 2.43
1808 6101 7.568433 TGTTTACAGCTTTTGTGTTTGTTTTC 58.432 30.769 0.00 0.00 41.10 2.29
1809 6102 6.713792 TTACAGCTTTTGTGTTTGTTTTCC 57.286 33.333 0.00 0.00 41.10 3.13
1810 6103 4.000325 ACAGCTTTTGTGTTTGTTTTCCC 59.000 39.130 0.00 0.00 38.99 3.97
1811 6104 3.061965 CAGCTTTTGTGTTTGTTTTCCCG 59.938 43.478 0.00 0.00 0.00 5.14
1812 6105 2.222931 GCTTTTGTGTTTGTTTTCCCGC 60.223 45.455 0.00 0.00 0.00 6.13
1813 6106 2.743636 TTTGTGTTTGTTTTCCCGCA 57.256 40.000 0.00 0.00 0.00 5.69
1814 6107 2.743636 TTGTGTTTGTTTTCCCGCAA 57.256 40.000 0.00 0.00 0.00 4.85
1815 6108 2.743636 TGTGTTTGTTTTCCCGCAAA 57.256 40.000 0.00 0.00 32.89 3.68
1816 6109 3.252974 TGTGTTTGTTTTCCCGCAAAT 57.747 38.095 0.00 0.00 37.02 2.32
1817 6110 3.190874 TGTGTTTGTTTTCCCGCAAATC 58.809 40.909 0.00 0.00 37.02 2.17
1818 6111 3.118956 TGTGTTTGTTTTCCCGCAAATCT 60.119 39.130 0.00 0.00 37.02 2.40
1819 6112 4.098044 TGTGTTTGTTTTCCCGCAAATCTA 59.902 37.500 0.00 0.00 37.02 1.98
1820 6113 5.221342 TGTGTTTGTTTTCCCGCAAATCTAT 60.221 36.000 0.00 0.00 37.02 1.98
1821 6114 5.694458 GTGTTTGTTTTCCCGCAAATCTATT 59.306 36.000 0.00 0.00 37.02 1.73
1822 6115 6.201997 GTGTTTGTTTTCCCGCAAATCTATTT 59.798 34.615 0.00 0.00 37.02 1.40
1824 6117 5.461032 TGTTTTCCCGCAAATCTATTTGT 57.539 34.783 14.98 0.00 46.63 2.83
1825 6118 5.848406 TGTTTTCCCGCAAATCTATTTGTT 58.152 33.333 14.98 0.00 46.63 2.83
1826 6119 6.284459 TGTTTTCCCGCAAATCTATTTGTTT 58.716 32.000 14.98 0.00 46.63 2.83
1827 6120 6.763610 TGTTTTCCCGCAAATCTATTTGTTTT 59.236 30.769 14.98 0.00 46.63 2.43
1828 6121 7.042389 TGTTTTCCCGCAAATCTATTTGTTTTC 60.042 33.333 14.98 0.56 46.63 2.29
1829 6122 5.066968 TCCCGCAAATCTATTTGTTTTCC 57.933 39.130 14.98 0.26 46.63 3.13
1830 6123 4.081917 TCCCGCAAATCTATTTGTTTTCCC 60.082 41.667 14.98 0.00 46.63 3.97
1831 6124 4.322349 CCCGCAAATCTATTTGTTTTCCCA 60.322 41.667 14.98 0.00 46.63 4.37
1832 6125 4.625311 CCGCAAATCTATTTGTTTTCCCAC 59.375 41.667 14.98 0.00 46.63 4.61
1833 6126 5.226396 CGCAAATCTATTTGTTTTCCCACA 58.774 37.500 14.98 0.00 46.63 4.17
1834 6127 5.694006 CGCAAATCTATTTGTTTTCCCACAA 59.306 36.000 14.98 0.00 46.63 3.33
1840 6133 2.517650 TTGTTTTCCCACAAATCGGC 57.482 45.000 0.00 0.00 33.60 5.54
1841 6134 0.676736 TGTTTTCCCACAAATCGGCC 59.323 50.000 0.00 0.00 0.00 6.13
1842 6135 0.388006 GTTTTCCCACAAATCGGCCG 60.388 55.000 22.12 22.12 0.00 6.13
1843 6136 0.537600 TTTTCCCACAAATCGGCCGA 60.538 50.000 33.12 33.12 0.00 5.54
1844 6137 1.238625 TTTCCCACAAATCGGCCGAC 61.239 55.000 33.75 0.00 0.00 4.79
1845 6138 2.359354 CCCACAAATCGGCCGACA 60.359 61.111 33.75 10.24 0.00 4.35
1905 6198 5.636543 CGTCACCGAACTCTAAAACCTTATT 59.363 40.000 0.00 0.00 35.63 1.40
1906 6199 6.146673 CGTCACCGAACTCTAAAACCTTATTT 59.853 38.462 0.00 0.00 35.63 1.40
1907 6200 7.516481 GTCACCGAACTCTAAAACCTTATTTC 58.484 38.462 0.00 0.00 0.00 2.17
1908 6201 7.172019 GTCACCGAACTCTAAAACCTTATTTCA 59.828 37.037 0.00 0.00 0.00 2.69
1909 6202 7.716123 TCACCGAACTCTAAAACCTTATTTCAA 59.284 33.333 0.00 0.00 0.00 2.69
1910 6203 8.512138 CACCGAACTCTAAAACCTTATTTCAAT 58.488 33.333 0.00 0.00 0.00 2.57
1911 6204 9.074576 ACCGAACTCTAAAACCTTATTTCAATT 57.925 29.630 0.00 0.00 0.00 2.32
1912 6205 9.556030 CCGAACTCTAAAACCTTATTTCAATTC 57.444 33.333 0.00 0.00 0.00 2.17
1929 6222 9.750125 ATTTCAATTCTTGTGTCTAAAACCTTC 57.250 29.630 0.00 0.00 0.00 3.46
1930 6223 7.272037 TCAATTCTTGTGTCTAAAACCTTCC 57.728 36.000 0.00 0.00 0.00 3.46
1931 6224 6.264518 TCAATTCTTGTGTCTAAAACCTTCCC 59.735 38.462 0.00 0.00 0.00 3.97
1932 6225 5.382664 TTCTTGTGTCTAAAACCTTCCCT 57.617 39.130 0.00 0.00 0.00 4.20
1933 6226 5.382664 TCTTGTGTCTAAAACCTTCCCTT 57.617 39.130 0.00 0.00 0.00 3.95
1934 6227 5.762279 TCTTGTGTCTAAAACCTTCCCTTT 58.238 37.500 0.00 0.00 0.00 3.11
1935 6228 6.192044 TCTTGTGTCTAAAACCTTCCCTTTT 58.808 36.000 0.00 0.00 0.00 2.27
1936 6229 6.320418 TCTTGTGTCTAAAACCTTCCCTTTTC 59.680 38.462 0.00 0.00 0.00 2.29
1937 6230 4.891168 TGTGTCTAAAACCTTCCCTTTTCC 59.109 41.667 0.00 0.00 0.00 3.13
1938 6231 4.280174 GTGTCTAAAACCTTCCCTTTTCCC 59.720 45.833 0.00 0.00 0.00 3.97
1939 6232 3.504906 GTCTAAAACCTTCCCTTTTCCCG 59.495 47.826 0.00 0.00 0.00 5.14
1940 6233 1.045407 AAAACCTTCCCTTTTCCCGC 58.955 50.000 0.00 0.00 0.00 6.13
1941 6234 0.105913 AAACCTTCCCTTTTCCCGCA 60.106 50.000 0.00 0.00 0.00 5.69
1942 6235 0.105913 AACCTTCCCTTTTCCCGCAA 60.106 50.000 0.00 0.00 0.00 4.85
1943 6236 0.105913 ACCTTCCCTTTTCCCGCAAA 60.106 50.000 0.00 0.00 0.00 3.68
1944 6237 1.266178 CCTTCCCTTTTCCCGCAAAT 58.734 50.000 0.00 0.00 0.00 2.32
1945 6238 1.204704 CCTTCCCTTTTCCCGCAAATC 59.795 52.381 0.00 0.00 0.00 2.17
1946 6239 1.892474 CTTCCCTTTTCCCGCAAATCA 59.108 47.619 0.00 0.00 0.00 2.57
1947 6240 1.544724 TCCCTTTTCCCGCAAATCAG 58.455 50.000 0.00 0.00 0.00 2.90
1948 6241 1.074727 TCCCTTTTCCCGCAAATCAGA 59.925 47.619 0.00 0.00 0.00 3.27
1949 6242 1.202348 CCCTTTTCCCGCAAATCAGAC 59.798 52.381 0.00 0.00 0.00 3.51
1950 6243 1.135689 CCTTTTCCCGCAAATCAGACG 60.136 52.381 0.00 0.00 0.00 4.18
1951 6244 0.239879 TTTTCCCGCAAATCAGACGC 59.760 50.000 0.00 0.00 0.00 5.19
1952 6245 0.886938 TTTCCCGCAAATCAGACGCA 60.887 50.000 0.00 0.00 0.00 5.24
1953 6246 1.573829 TTCCCGCAAATCAGACGCAC 61.574 55.000 0.00 0.00 0.00 5.34
1954 6247 2.324330 CCCGCAAATCAGACGCACA 61.324 57.895 0.00 0.00 0.00 4.57
1955 6248 1.573932 CCGCAAATCAGACGCACAA 59.426 52.632 0.00 0.00 0.00 3.33
1956 6249 0.040514 CCGCAAATCAGACGCACAAA 60.041 50.000 0.00 0.00 0.00 2.83
1957 6250 1.401409 CCGCAAATCAGACGCACAAAT 60.401 47.619 0.00 0.00 0.00 2.32
1958 6251 2.318578 CGCAAATCAGACGCACAAATT 58.681 42.857 0.00 0.00 0.00 1.82
1959 6252 3.487536 CGCAAATCAGACGCACAAATTA 58.512 40.909 0.00 0.00 0.00 1.40
1960 6253 3.539563 CGCAAATCAGACGCACAAATTAG 59.460 43.478 0.00 0.00 0.00 1.73
1961 6254 4.668941 CGCAAATCAGACGCACAAATTAGA 60.669 41.667 0.00 0.00 0.00 2.10
1962 6255 5.153513 GCAAATCAGACGCACAAATTAGAA 58.846 37.500 0.00 0.00 0.00 2.10
1963 6256 5.629020 GCAAATCAGACGCACAAATTAGAAA 59.371 36.000 0.00 0.00 0.00 2.52
1964 6257 6.143758 GCAAATCAGACGCACAAATTAGAAAA 59.856 34.615 0.00 0.00 0.00 2.29
1965 6258 7.617935 GCAAATCAGACGCACAAATTAGAAAAG 60.618 37.037 0.00 0.00 0.00 2.27
1966 6259 5.356882 TCAGACGCACAAATTAGAAAAGG 57.643 39.130 0.00 0.00 0.00 3.11
1967 6260 4.215399 TCAGACGCACAAATTAGAAAAGGG 59.785 41.667 0.00 0.00 0.00 3.95
1968 6261 3.057526 AGACGCACAAATTAGAAAAGGGC 60.058 43.478 0.00 0.00 0.00 5.19
1969 6262 2.890945 ACGCACAAATTAGAAAAGGGCT 59.109 40.909 0.00 0.00 0.00 5.19
1970 6263 3.244976 CGCACAAATTAGAAAAGGGCTG 58.755 45.455 0.00 0.00 0.00 4.85
1971 6264 3.057596 CGCACAAATTAGAAAAGGGCTGA 60.058 43.478 0.00 0.00 0.00 4.26
1972 6265 4.237724 GCACAAATTAGAAAAGGGCTGAC 58.762 43.478 0.00 0.00 0.00 3.51
1973 6266 4.261994 GCACAAATTAGAAAAGGGCTGACA 60.262 41.667 0.00 0.00 0.00 3.58
1974 6267 5.738783 GCACAAATTAGAAAAGGGCTGACAA 60.739 40.000 0.00 0.00 0.00 3.18
1975 6268 6.279882 CACAAATTAGAAAAGGGCTGACAAA 58.720 36.000 0.00 0.00 0.00 2.83
1976 6269 6.930722 CACAAATTAGAAAAGGGCTGACAAAT 59.069 34.615 0.00 0.00 0.00 2.32
1977 6270 7.442062 CACAAATTAGAAAAGGGCTGACAAATT 59.558 33.333 0.00 0.00 0.00 1.82
1978 6271 8.646900 ACAAATTAGAAAAGGGCTGACAAATTA 58.353 29.630 0.00 0.00 0.00 1.40
1979 6272 8.925700 CAAATTAGAAAAGGGCTGACAAATTAC 58.074 33.333 0.00 0.00 0.00 1.89
1980 6273 4.766404 AGAAAAGGGCTGACAAATTACG 57.234 40.909 0.00 0.00 0.00 3.18
1981 6274 4.394729 AGAAAAGGGCTGACAAATTACGA 58.605 39.130 0.00 0.00 0.00 3.43
1982 6275 4.215613 AGAAAAGGGCTGACAAATTACGAC 59.784 41.667 0.00 0.00 0.00 4.34
1983 6276 2.851263 AGGGCTGACAAATTACGACA 57.149 45.000 0.00 0.00 0.00 4.35
1984 6277 2.699954 AGGGCTGACAAATTACGACAG 58.300 47.619 0.00 0.00 0.00 3.51
1985 6278 2.301870 AGGGCTGACAAATTACGACAGA 59.698 45.455 10.14 0.00 0.00 3.41
1986 6279 2.415512 GGGCTGACAAATTACGACAGAC 59.584 50.000 10.14 7.66 34.01 3.51
1988 6281 2.984471 GCTGACAAATTACGACAGACGA 59.016 45.455 10.14 0.00 45.77 4.20
1989 6282 3.181543 GCTGACAAATTACGACAGACGAC 60.182 47.826 10.14 0.00 45.77 4.34
1990 6283 2.975193 TGACAAATTACGACAGACGACG 59.025 45.455 0.00 0.00 45.77 5.12
1991 6284 2.322161 ACAAATTACGACAGACGACGG 58.678 47.619 0.00 0.00 45.77 4.79
1992 6285 1.058695 CAAATTACGACAGACGACGGC 59.941 52.381 0.00 0.00 45.77 5.68
1993 6286 0.795735 AATTACGACAGACGACGGCG 60.796 55.000 10.39 10.39 45.77 6.46
2011 6304 2.967781 GCGTTTTGCCACAAATCAAAC 58.032 42.857 0.00 0.00 37.76 2.93
2012 6305 2.349886 GCGTTTTGCCACAAATCAAACA 59.650 40.909 0.00 0.00 37.76 2.83
2013 6306 3.783873 GCGTTTTGCCACAAATCAAACAC 60.784 43.478 0.00 0.00 37.76 3.32
2014 6307 3.369147 CGTTTTGCCACAAATCAAACACA 59.631 39.130 0.00 0.00 32.58 3.72
2015 6308 4.646960 GTTTTGCCACAAATCAAACACAC 58.353 39.130 0.00 0.00 32.58 3.82
2016 6309 3.599730 TTGCCACAAATCAAACACACA 57.400 38.095 0.00 0.00 0.00 3.72
2017 6310 3.599730 TGCCACAAATCAAACACACAA 57.400 38.095 0.00 0.00 0.00 3.33
2018 6311 3.930336 TGCCACAAATCAAACACACAAA 58.070 36.364 0.00 0.00 0.00 2.83
2019 6312 4.318332 TGCCACAAATCAAACACACAAAA 58.682 34.783 0.00 0.00 0.00 2.44
2020 6313 4.940046 TGCCACAAATCAAACACACAAAAT 59.060 33.333 0.00 0.00 0.00 1.82
2021 6314 5.413833 TGCCACAAATCAAACACACAAAATT 59.586 32.000 0.00 0.00 0.00 1.82
2022 6315 6.595326 TGCCACAAATCAAACACACAAAATTA 59.405 30.769 0.00 0.00 0.00 1.40
2023 6316 7.125113 GCCACAAATCAAACACACAAAATTAG 58.875 34.615 0.00 0.00 0.00 1.73
2024 6317 7.629130 CCACAAATCAAACACACAAAATTAGG 58.371 34.615 0.00 0.00 0.00 2.69
2025 6318 7.254727 CCACAAATCAAACACACAAAATTAGGG 60.255 37.037 0.00 0.00 0.00 3.53
2026 6319 7.493971 CACAAATCAAACACACAAAATTAGGGA 59.506 33.333 0.00 0.00 0.00 4.20
2027 6320 8.043710 ACAAATCAAACACACAAAATTAGGGAA 58.956 29.630 0.00 0.00 0.00 3.97
2028 6321 9.054922 CAAATCAAACACACAAAATTAGGGAAT 57.945 29.630 0.00 0.00 0.00 3.01
2029 6322 8.606040 AATCAAACACACAAAATTAGGGAATG 57.394 30.769 0.00 0.00 0.00 2.67
2030 6323 7.118496 TCAAACACACAAAATTAGGGAATGT 57.882 32.000 0.00 0.00 0.00 2.71
2031 6324 7.206687 TCAAACACACAAAATTAGGGAATGTC 58.793 34.615 0.00 0.00 0.00 3.06
2032 6325 6.976934 AACACACAAAATTAGGGAATGTCT 57.023 33.333 0.00 0.00 0.00 3.41
2033 6326 6.331369 ACACACAAAATTAGGGAATGTCTG 57.669 37.500 0.00 0.00 0.00 3.51
2034 6327 6.068010 ACACACAAAATTAGGGAATGTCTGA 58.932 36.000 0.00 0.00 0.00 3.27
2035 6328 6.721208 ACACACAAAATTAGGGAATGTCTGAT 59.279 34.615 0.00 0.00 0.00 2.90
2036 6329 7.888021 ACACACAAAATTAGGGAATGTCTGATA 59.112 33.333 0.00 0.00 0.00 2.15
2037 6330 8.739039 CACACAAAATTAGGGAATGTCTGATAA 58.261 33.333 0.00 0.00 0.00 1.75
2038 6331 9.308000 ACACAAAATTAGGGAATGTCTGATAAA 57.692 29.630 0.00 0.00 0.00 1.40
2044 6337 9.813826 AATTAGGGAATGTCTGATAAATTAGGG 57.186 33.333 0.00 0.00 0.00 3.53
2045 6338 8.575736 TTAGGGAATGTCTGATAAATTAGGGA 57.424 34.615 0.00 0.00 0.00 4.20
2046 6339 7.465900 AGGGAATGTCTGATAAATTAGGGAA 57.534 36.000 0.00 0.00 0.00 3.97
2047 6340 7.521669 AGGGAATGTCTGATAAATTAGGGAAG 58.478 38.462 0.00 0.00 0.00 3.46
2048 6341 6.717084 GGGAATGTCTGATAAATTAGGGAAGG 59.283 42.308 0.00 0.00 0.00 3.46
2049 6342 7.290813 GGAATGTCTGATAAATTAGGGAAGGT 58.709 38.462 0.00 0.00 0.00 3.50
2050 6343 7.780271 GGAATGTCTGATAAATTAGGGAAGGTT 59.220 37.037 0.00 0.00 0.00 3.50
2051 6344 8.525290 AATGTCTGATAAATTAGGGAAGGTTG 57.475 34.615 0.00 0.00 0.00 3.77
2052 6345 5.885912 TGTCTGATAAATTAGGGAAGGTTGC 59.114 40.000 0.00 0.00 0.00 4.17
2053 6346 5.299531 GTCTGATAAATTAGGGAAGGTTGCC 59.700 44.000 0.00 0.00 39.23 4.52
2054 6347 4.542697 TGATAAATTAGGGAAGGTTGCCC 58.457 43.478 0.00 0.00 46.40 5.36
2059 6352 4.986708 GGGAAGGTTGCCCGCCAA 62.987 66.667 0.00 0.00 35.50 4.52
2060 6353 2.915137 GGAAGGTTGCCCGCCAAA 60.915 61.111 0.00 0.00 34.68 3.28
2061 6354 2.338620 GAAGGTTGCCCGCCAAAC 59.661 61.111 0.00 0.00 41.59 2.93
2064 6357 2.597510 GGTTGCCCGCCAAACTCT 60.598 61.111 0.00 0.00 38.15 3.24
2065 6358 1.302993 GGTTGCCCGCCAAACTCTA 60.303 57.895 0.00 0.00 38.15 2.43
2066 6359 0.891904 GGTTGCCCGCCAAACTCTAA 60.892 55.000 0.00 0.00 38.15 2.10
2067 6360 0.955905 GTTGCCCGCCAAACTCTAAA 59.044 50.000 0.00 0.00 34.68 1.85
2068 6361 1.338655 GTTGCCCGCCAAACTCTAAAA 59.661 47.619 0.00 0.00 34.68 1.52
2069 6362 0.955905 TGCCCGCCAAACTCTAAAAC 59.044 50.000 0.00 0.00 0.00 2.43
2070 6363 0.242825 GCCCGCCAAACTCTAAAACC 59.757 55.000 0.00 0.00 0.00 3.27
2071 6364 1.905637 CCCGCCAAACTCTAAAACCT 58.094 50.000 0.00 0.00 0.00 3.50
2072 6365 2.235891 CCCGCCAAACTCTAAAACCTT 58.764 47.619 0.00 0.00 0.00 3.50
2073 6366 3.414269 CCCGCCAAACTCTAAAACCTTA 58.586 45.455 0.00 0.00 0.00 2.69
2074 6367 4.014406 CCCGCCAAACTCTAAAACCTTAT 58.986 43.478 0.00 0.00 0.00 1.73
2075 6368 4.461431 CCCGCCAAACTCTAAAACCTTATT 59.539 41.667 0.00 0.00 0.00 1.40
2076 6369 5.392703 CCCGCCAAACTCTAAAACCTTATTC 60.393 44.000 0.00 0.00 0.00 1.75
2077 6370 5.392703 CCGCCAAACTCTAAAACCTTATTCC 60.393 44.000 0.00 0.00 0.00 3.01
2078 6371 5.182380 CGCCAAACTCTAAAACCTTATTCCA 59.818 40.000 0.00 0.00 0.00 3.53
2079 6372 6.294286 CGCCAAACTCTAAAACCTTATTCCAA 60.294 38.462 0.00 0.00 0.00 3.53
2080 6373 7.576856 CGCCAAACTCTAAAACCTTATTCCAAT 60.577 37.037 0.00 0.00 0.00 3.16
2081 6374 8.094548 GCCAAACTCTAAAACCTTATTCCAATT 58.905 33.333 0.00 0.00 0.00 2.32
2082 6375 9.639601 CCAAACTCTAAAACCTTATTCCAATTC 57.360 33.333 0.00 0.00 0.00 2.17
2086 6379 9.588096 ACTCTAAAACCTTATTCCAATTCTTGT 57.412 29.630 0.00 0.00 0.00 3.16
2087 6380 9.846248 CTCTAAAACCTTATTCCAATTCTTGTG 57.154 33.333 0.00 0.00 0.00 3.33
2088 6381 9.362151 TCTAAAACCTTATTCCAATTCTTGTGT 57.638 29.630 0.00 0.00 0.00 3.72
2089 6382 9.626045 CTAAAACCTTATTCCAATTCTTGTGTC 57.374 33.333 0.00 0.00 0.00 3.67
2090 6383 7.839680 AAACCTTATTCCAATTCTTGTGTCT 57.160 32.000 0.00 0.00 0.00 3.41
2091 6384 8.934023 AAACCTTATTCCAATTCTTGTGTCTA 57.066 30.769 0.00 0.00 0.00 2.59
2092 6385 8.934023 AACCTTATTCCAATTCTTGTGTCTAA 57.066 30.769 0.00 0.00 0.00 2.10
2093 6386 8.934023 ACCTTATTCCAATTCTTGTGTCTAAA 57.066 30.769 0.00 0.00 0.00 1.85
2094 6387 9.362151 ACCTTATTCCAATTCTTGTGTCTAAAA 57.638 29.630 0.00 0.00 0.00 1.52
2095 6388 9.626045 CCTTATTCCAATTCTTGTGTCTAAAAC 57.374 33.333 0.00 0.00 0.00 2.43
2096 6389 9.626045 CTTATTCCAATTCTTGTGTCTAAAACC 57.374 33.333 0.00 0.00 0.00 3.27
2097 6390 7.839680 ATTCCAATTCTTGTGTCTAAAACCT 57.160 32.000 0.00 0.00 0.00 3.50
2098 6391 7.654022 TTCCAATTCTTGTGTCTAAAACCTT 57.346 32.000 0.00 0.00 0.00 3.50
2099 6392 8.754991 TTCCAATTCTTGTGTCTAAAACCTTA 57.245 30.769 0.00 0.00 0.00 2.69
2100 6393 8.934023 TCCAATTCTTGTGTCTAAAACCTTAT 57.066 30.769 0.00 0.00 0.00 1.73
2101 6394 9.362151 TCCAATTCTTGTGTCTAAAACCTTATT 57.638 29.630 0.00 0.00 0.00 1.40
2117 6410 9.777297 AAAACCTTATTATTTCAATGCTTGTGT 57.223 25.926 0.00 0.00 0.00 3.72
2118 6411 8.986477 AACCTTATTATTTCAATGCTTGTGTC 57.014 30.769 0.00 0.00 0.00 3.67
2119 6412 8.353423 ACCTTATTATTTCAATGCTTGTGTCT 57.647 30.769 0.00 0.00 0.00 3.41
2120 6413 8.462016 ACCTTATTATTTCAATGCTTGTGTCTC 58.538 33.333 0.00 0.00 0.00 3.36
2121 6414 8.680903 CCTTATTATTTCAATGCTTGTGTCTCT 58.319 33.333 0.00 0.00 0.00 3.10
2125 6418 8.801715 TTATTTCAATGCTTGTGTCTCTTTTC 57.198 30.769 0.00 0.00 0.00 2.29
2126 6419 4.836125 TCAATGCTTGTGTCTCTTTTCC 57.164 40.909 0.00 0.00 0.00 3.13
2127 6420 3.569701 TCAATGCTTGTGTCTCTTTTCCC 59.430 43.478 0.00 0.00 0.00 3.97
2128 6421 1.593196 TGCTTGTGTCTCTTTTCCCG 58.407 50.000 0.00 0.00 0.00 5.14
2129 6422 0.238553 GCTTGTGTCTCTTTTCCCGC 59.761 55.000 0.00 0.00 0.00 6.13
2130 6423 1.593196 CTTGTGTCTCTTTTCCCGCA 58.407 50.000 0.00 0.00 0.00 5.69
2131 6424 1.946768 CTTGTGTCTCTTTTCCCGCAA 59.053 47.619 0.00 0.00 0.00 4.85
2132 6425 2.045561 TGTGTCTCTTTTCCCGCAAA 57.954 45.000 0.00 0.00 0.00 3.68
2133 6426 2.582052 TGTGTCTCTTTTCCCGCAAAT 58.418 42.857 0.00 0.00 0.00 2.32
2134 6427 2.552315 TGTGTCTCTTTTCCCGCAAATC 59.448 45.455 0.00 0.00 0.00 2.17
2135 6428 2.552315 GTGTCTCTTTTCCCGCAAATCA 59.448 45.455 0.00 0.00 0.00 2.57
2136 6429 3.004315 GTGTCTCTTTTCCCGCAAATCAA 59.996 43.478 0.00 0.00 0.00 2.57
2137 6430 3.634448 TGTCTCTTTTCCCGCAAATCAAA 59.366 39.130 0.00 0.00 0.00 2.69
2138 6431 3.981416 GTCTCTTTTCCCGCAAATCAAAC 59.019 43.478 0.00 0.00 0.00 2.93
2139 6432 3.634448 TCTCTTTTCCCGCAAATCAAACA 59.366 39.130 0.00 0.00 0.00 2.83
2140 6433 3.712187 TCTTTTCCCGCAAATCAAACAC 58.288 40.909 0.00 0.00 0.00 3.32
2141 6434 3.131223 TCTTTTCCCGCAAATCAAACACA 59.869 39.130 0.00 0.00 0.00 3.72
2142 6435 2.500509 TTCCCGCAAATCAAACACAC 57.499 45.000 0.00 0.00 0.00 3.82
2143 6436 1.393603 TCCCGCAAATCAAACACACA 58.606 45.000 0.00 0.00 0.00 3.72
2144 6437 1.751351 TCCCGCAAATCAAACACACAA 59.249 42.857 0.00 0.00 0.00 3.33
2145 6438 2.166459 TCCCGCAAATCAAACACACAAA 59.834 40.909 0.00 0.00 0.00 2.83
2146 6439 3.129871 CCCGCAAATCAAACACACAAAT 58.870 40.909 0.00 0.00 0.00 2.32
2147 6440 3.559242 CCCGCAAATCAAACACACAAATT 59.441 39.130 0.00 0.00 0.00 1.82
2148 6441 4.747108 CCCGCAAATCAAACACACAAATTA 59.253 37.500 0.00 0.00 0.00 1.40
2149 6442 5.107530 CCCGCAAATCAAACACACAAATTAG 60.108 40.000 0.00 0.00 0.00 1.73
2150 6443 5.107530 CCGCAAATCAAACACACAAATTAGG 60.108 40.000 0.00 0.00 0.00 2.69
2151 6444 5.689514 CGCAAATCAAACACACAAATTAGGA 59.310 36.000 0.00 0.00 0.00 2.94
2152 6445 6.345723 CGCAAATCAAACACACAAATTAGGAC 60.346 38.462 0.00 0.00 0.00 3.85
2153 6446 6.073819 GCAAATCAAACACACAAATTAGGACC 60.074 38.462 0.00 0.00 0.00 4.46
2154 6447 6.976934 AATCAAACACACAAATTAGGACCT 57.023 33.333 0.00 0.00 0.00 3.85
2155 6448 6.976934 ATCAAACACACAAATTAGGACCTT 57.023 33.333 0.00 0.00 0.00 3.50
2156 6449 8.472007 AATCAAACACACAAATTAGGACCTTA 57.528 30.769 0.00 0.00 0.00 2.69
2157 6450 8.650143 ATCAAACACACAAATTAGGACCTTAT 57.350 30.769 0.00 0.00 0.00 1.73
2158 6451 8.472007 TCAAACACACAAATTAGGACCTTATT 57.528 30.769 0.00 0.00 0.00 1.40
2159 6452 9.575868 TCAAACACACAAATTAGGACCTTATTA 57.424 29.630 6.17 0.00 0.00 0.98
2174 6467 9.533831 AGGACCTTATTATTTCAATTCTTGTGT 57.466 29.630 0.00 0.00 0.00 3.72
2175 6468 9.788960 GGACCTTATTATTTCAATTCTTGTGTC 57.211 33.333 0.00 0.00 0.00 3.67
2176 6469 9.788960 GACCTTATTATTTCAATTCTTGTGTCC 57.211 33.333 0.00 0.00 0.00 4.02
2177 6470 8.749354 ACCTTATTATTTCAATTCTTGTGTCCC 58.251 33.333 0.00 0.00 0.00 4.46
2178 6471 8.197439 CCTTATTATTTCAATTCTTGTGTCCCC 58.803 37.037 0.00 0.00 0.00 4.81
2179 6472 5.993748 TTATTTCAATTCTTGTGTCCCCC 57.006 39.130 0.00 0.00 0.00 5.40
2180 6473 1.904287 TTCAATTCTTGTGTCCCCCG 58.096 50.000 0.00 0.00 0.00 5.73
2181 6474 0.608035 TCAATTCTTGTGTCCCCCGC 60.608 55.000 0.00 0.00 0.00 6.13
2182 6475 0.893270 CAATTCTTGTGTCCCCCGCA 60.893 55.000 0.00 0.00 0.00 5.69
2183 6476 0.178975 AATTCTTGTGTCCCCCGCAA 60.179 50.000 0.00 0.00 41.14 4.85
2184 6477 0.178975 ATTCTTGTGTCCCCCGCAAA 60.179 50.000 0.00 0.00 42.69 3.68
2185 6478 0.178975 TTCTTGTGTCCCCCGCAAAT 60.179 50.000 0.00 0.00 42.69 2.32
2186 6479 0.608035 TCTTGTGTCCCCCGCAAATC 60.608 55.000 0.00 0.00 42.69 2.17
2187 6480 0.893270 CTTGTGTCCCCCGCAAATCA 60.893 55.000 0.00 0.00 42.69 2.57
2188 6481 0.468214 TTGTGTCCCCCGCAAATCAA 60.468 50.000 0.00 0.00 40.48 2.57
2189 6482 0.468214 TGTGTCCCCCGCAAATCAAA 60.468 50.000 0.00 0.00 0.00 2.69
2190 6483 0.038618 GTGTCCCCCGCAAATCAAAC 60.039 55.000 0.00 0.00 0.00 2.93
2191 6484 0.468214 TGTCCCCCGCAAATCAAACA 60.468 50.000 0.00 0.00 0.00 2.83
2192 6485 0.038618 GTCCCCCGCAAATCAAACAC 60.039 55.000 0.00 0.00 0.00 3.32
2193 6486 0.468214 TCCCCCGCAAATCAAACACA 60.468 50.000 0.00 0.00 0.00 3.72
2194 6487 0.319469 CCCCCGCAAATCAAACACAC 60.319 55.000 0.00 0.00 0.00 3.82
2195 6488 0.387202 CCCCGCAAATCAAACACACA 59.613 50.000 0.00 0.00 0.00 3.72
2196 6489 1.202463 CCCCGCAAATCAAACACACAA 60.202 47.619 0.00 0.00 0.00 3.33
2197 6490 2.544685 CCCGCAAATCAAACACACAAA 58.455 42.857 0.00 0.00 0.00 2.83
2198 6491 3.129871 CCCGCAAATCAAACACACAAAT 58.870 40.909 0.00 0.00 0.00 2.32
2199 6492 3.559242 CCCGCAAATCAAACACACAAATT 59.441 39.130 0.00 0.00 0.00 1.82
2200 6493 4.747108 CCCGCAAATCAAACACACAAATTA 59.253 37.500 0.00 0.00 0.00 1.40
2201 6494 5.107530 CCCGCAAATCAAACACACAAATTAG 60.108 40.000 0.00 0.00 0.00 1.73
2202 6495 5.107530 CCGCAAATCAAACACACAAATTAGG 60.108 40.000 0.00 0.00 0.00 2.69
2203 6496 5.689514 CGCAAATCAAACACACAAATTAGGA 59.310 36.000 0.00 0.00 0.00 2.94
2204 6497 6.199908 CGCAAATCAAACACACAAATTAGGAA 59.800 34.615 0.00 0.00 0.00 3.36
2205 6498 7.254252 CGCAAATCAAACACACAAATTAGGAAA 60.254 33.333 0.00 0.00 0.00 3.13
2206 6499 8.063630 GCAAATCAAACACACAAATTAGGAAAG 58.936 33.333 0.00 0.00 0.00 2.62
2207 6500 8.550376 CAAATCAAACACACAAATTAGGAAAGG 58.450 33.333 0.00 0.00 0.00 3.11
2208 6501 5.596845 TCAAACACACAAATTAGGAAAGGC 58.403 37.500 0.00 0.00 0.00 4.35
2209 6502 4.600692 AACACACAAATTAGGAAAGGCC 57.399 40.909 0.00 0.00 0.00 5.19
2210 6503 2.897326 ACACACAAATTAGGAAAGGCCC 59.103 45.455 0.00 0.00 37.37 5.80
2211 6504 2.094752 CACACAAATTAGGAAAGGCCCG 60.095 50.000 0.00 0.00 37.37 6.13
2212 6505 2.224917 ACACAAATTAGGAAAGGCCCGA 60.225 45.455 0.00 0.00 37.37 5.14
2213 6506 2.163613 CACAAATTAGGAAAGGCCCGAC 59.836 50.000 0.00 0.00 37.37 4.79
2214 6507 2.224917 ACAAATTAGGAAAGGCCCGACA 60.225 45.455 0.00 0.00 37.37 4.35
2215 6508 2.823154 CAAATTAGGAAAGGCCCGACAA 59.177 45.455 0.00 0.00 37.37 3.18
2216 6509 2.891191 ATTAGGAAAGGCCCGACAAA 57.109 45.000 0.00 0.00 37.37 2.83
2217 6510 2.891191 TTAGGAAAGGCCCGACAAAT 57.109 45.000 0.00 0.00 37.37 2.32
2218 6511 2.891191 TAGGAAAGGCCCGACAAATT 57.109 45.000 0.00 0.00 37.37 1.82
2219 6512 2.891191 AGGAAAGGCCCGACAAATTA 57.109 45.000 0.00 0.00 37.37 1.40
2220 6513 2.723273 AGGAAAGGCCCGACAAATTAG 58.277 47.619 0.00 0.00 37.37 1.73
2221 6514 1.134367 GGAAAGGCCCGACAAATTAGC 59.866 52.381 0.00 0.00 0.00 3.09
2222 6515 1.816224 GAAAGGCCCGACAAATTAGCA 59.184 47.619 0.00 0.00 0.00 3.49
2223 6516 1.917872 AAGGCCCGACAAATTAGCAA 58.082 45.000 0.00 0.00 0.00 3.91
2224 6517 1.917872 AGGCCCGACAAATTAGCAAA 58.082 45.000 0.00 0.00 0.00 3.68
2225 6518 2.456577 AGGCCCGACAAATTAGCAAAT 58.543 42.857 0.00 0.00 0.00 2.32
2226 6519 2.831526 AGGCCCGACAAATTAGCAAATT 59.168 40.909 0.00 0.00 36.87 1.82
2227 6520 4.020543 AGGCCCGACAAATTAGCAAATTA 58.979 39.130 0.00 0.00 34.12 1.40
2228 6521 4.464597 AGGCCCGACAAATTAGCAAATTAA 59.535 37.500 0.00 0.00 34.12 1.40
2229 6522 4.803613 GGCCCGACAAATTAGCAAATTAAG 59.196 41.667 0.00 0.00 34.12 1.85
2230 6523 4.803613 GCCCGACAAATTAGCAAATTAAGG 59.196 41.667 0.00 0.00 34.12 2.69
2231 6524 5.348164 CCCGACAAATTAGCAAATTAAGGG 58.652 41.667 0.00 0.00 34.12 3.95
2232 6525 5.126384 CCCGACAAATTAGCAAATTAAGGGA 59.874 40.000 0.00 0.00 36.99 4.20
2233 6526 6.265577 CCGACAAATTAGCAAATTAAGGGAG 58.734 40.000 0.00 0.00 34.12 4.30
2234 6527 6.094881 CCGACAAATTAGCAAATTAAGGGAGA 59.905 38.462 0.00 0.00 34.12 3.71
2235 6528 6.967199 CGACAAATTAGCAAATTAAGGGAGAC 59.033 38.462 0.00 0.00 34.12 3.36
2236 6529 6.852664 ACAAATTAGCAAATTAAGGGAGACG 58.147 36.000 0.00 0.00 34.12 4.18
2237 6530 6.657541 ACAAATTAGCAAATTAAGGGAGACGA 59.342 34.615 0.00 0.00 34.12 4.20
2238 6531 6.679327 AATTAGCAAATTAAGGGAGACGAC 57.321 37.500 0.00 0.00 33.45 4.34
2239 6532 2.618053 AGCAAATTAAGGGAGACGACG 58.382 47.619 0.00 0.00 0.00 5.12
2240 6533 1.664151 GCAAATTAAGGGAGACGACGG 59.336 52.381 0.00 0.00 0.00 4.79
2241 6534 1.664151 CAAATTAAGGGAGACGACGGC 59.336 52.381 0.00 0.00 0.00 5.68
2242 6535 0.179119 AATTAAGGGAGACGACGGCG 60.179 55.000 10.39 10.39 44.79 6.46
2252 6545 3.620286 CGACGGCGTTTTCTCACA 58.380 55.556 16.19 0.00 0.00 3.58
2253 6546 1.928653 CGACGGCGTTTTCTCACAA 59.071 52.632 16.19 0.00 0.00 3.33
2254 6547 0.302288 CGACGGCGTTTTCTCACAAA 59.698 50.000 16.19 0.00 0.00 2.83
2255 6548 1.070175 CGACGGCGTTTTCTCACAAAT 60.070 47.619 16.19 0.00 0.00 2.32
2256 6549 2.571206 GACGGCGTTTTCTCACAAATC 58.429 47.619 16.19 0.00 0.00 2.17
2257 6550 1.944024 ACGGCGTTTTCTCACAAATCA 59.056 42.857 6.77 0.00 0.00 2.57
2258 6551 2.356382 ACGGCGTTTTCTCACAAATCAA 59.644 40.909 6.77 0.00 0.00 2.57
2259 6552 3.181495 ACGGCGTTTTCTCACAAATCAAA 60.181 39.130 6.77 0.00 0.00 2.69
2260 6553 3.980775 CGGCGTTTTCTCACAAATCAAAT 59.019 39.130 0.00 0.00 0.00 2.32
2261 6554 4.143556 CGGCGTTTTCTCACAAATCAAATG 60.144 41.667 0.00 0.00 0.00 2.32
2262 6555 4.376311 GGCGTTTTCTCACAAATCAAATGC 60.376 41.667 0.00 0.00 38.22 3.56
2263 6556 4.208873 GCGTTTTCTCACAAATCAAATGCA 59.791 37.500 0.00 0.00 38.62 3.96
2264 6557 5.276773 GCGTTTTCTCACAAATCAAATGCAA 60.277 36.000 0.00 0.00 38.62 4.08
2265 6558 6.703857 CGTTTTCTCACAAATCAAATGCAAA 58.296 32.000 0.00 0.00 0.00 3.68
2266 6559 7.178741 CGTTTTCTCACAAATCAAATGCAAAA 58.821 30.769 0.00 0.00 0.00 2.44
2267 6560 7.691463 CGTTTTCTCACAAATCAAATGCAAAAA 59.309 29.630 0.00 0.00 0.00 1.94
2294 6587 5.300411 GGAAAGGTCCGATAAATTAGGGA 57.700 43.478 0.00 0.00 33.05 4.20
2295 6588 5.687780 GGAAAGGTCCGATAAATTAGGGAA 58.312 41.667 0.00 0.00 33.05 3.97
2296 6589 5.763698 GGAAAGGTCCGATAAATTAGGGAAG 59.236 44.000 0.00 0.00 33.05 3.46
2297 6590 4.976540 AGGTCCGATAAATTAGGGAAGG 57.023 45.455 0.00 0.00 0.00 3.46
2298 6591 4.304659 AGGTCCGATAAATTAGGGAAGGT 58.695 43.478 0.00 0.00 0.00 3.50
2299 6592 4.725304 AGGTCCGATAAATTAGGGAAGGTT 59.275 41.667 0.00 0.00 0.00 3.50
2300 6593 5.907079 AGGTCCGATAAATTAGGGAAGGTTA 59.093 40.000 0.00 0.00 0.00 2.85
2301 6594 6.561454 AGGTCCGATAAATTAGGGAAGGTTAT 59.439 38.462 0.00 0.00 0.00 1.89
2302 6595 6.877855 GGTCCGATAAATTAGGGAAGGTTATC 59.122 42.308 0.00 0.00 0.00 1.75
2303 6596 6.877855 GTCCGATAAATTAGGGAAGGTTATCC 59.122 42.308 0.00 0.00 38.86 2.59
2304 6597 5.873164 CCGATAAATTAGGGAAGGTTATCCG 59.127 44.000 0.00 0.00 40.62 4.18
2305 6598 5.350640 CGATAAATTAGGGAAGGTTATCCGC 59.649 44.000 0.00 0.00 40.62 5.54
2306 6599 3.503800 AATTAGGGAAGGTTATCCGCC 57.496 47.619 0.00 0.00 40.62 6.13
2307 6600 1.882308 TTAGGGAAGGTTATCCGCCA 58.118 50.000 6.98 0.00 40.62 5.69
2308 6601 1.882308 TAGGGAAGGTTATCCGCCAA 58.118 50.000 6.98 0.00 40.62 4.52
2309 6602 0.996583 AGGGAAGGTTATCCGCCAAA 59.003 50.000 6.98 0.00 40.62 3.28
2310 6603 1.100510 GGGAAGGTTATCCGCCAAAC 58.899 55.000 6.98 0.00 40.62 2.93
2311 6604 1.340697 GGGAAGGTTATCCGCCAAACT 60.341 52.381 6.98 0.00 40.62 2.66
2312 6605 2.014857 GGAAGGTTATCCGCCAAACTC 58.985 52.381 1.26 0.00 39.05 3.01
2313 6606 2.355818 GGAAGGTTATCCGCCAAACTCT 60.356 50.000 1.26 0.00 39.05 3.24
2314 6607 3.118519 GGAAGGTTATCCGCCAAACTCTA 60.119 47.826 1.26 0.00 39.05 2.43
2315 6608 4.510571 GAAGGTTATCCGCCAAACTCTAA 58.489 43.478 0.00 0.00 39.05 2.10
2316 6609 4.563140 AGGTTATCCGCCAAACTCTAAA 57.437 40.909 0.00 0.00 39.05 1.85
2317 6610 4.913784 AGGTTATCCGCCAAACTCTAAAA 58.086 39.130 0.00 0.00 39.05 1.52
2318 6611 5.506708 AGGTTATCCGCCAAACTCTAAAAT 58.493 37.500 0.00 0.00 39.05 1.82
2319 6612 5.589050 AGGTTATCCGCCAAACTCTAAAATC 59.411 40.000 0.00 0.00 39.05 2.17
2320 6613 5.589050 GGTTATCCGCCAAACTCTAAAATCT 59.411 40.000 0.00 0.00 0.00 2.40
2321 6614 6.458342 GGTTATCCGCCAAACTCTAAAATCTG 60.458 42.308 0.00 0.00 0.00 2.90
2322 6615 4.015872 TCCGCCAAACTCTAAAATCTGT 57.984 40.909 0.00 0.00 0.00 3.41
2323 6616 4.394729 TCCGCCAAACTCTAAAATCTGTT 58.605 39.130 0.00 0.00 0.00 3.16
2324 6617 4.825085 TCCGCCAAACTCTAAAATCTGTTT 59.175 37.500 0.00 0.00 33.56 2.83
2325 6618 5.048991 TCCGCCAAACTCTAAAATCTGTTTC 60.049 40.000 0.00 0.00 31.30 2.78
2326 6619 5.154222 CGCCAAACTCTAAAATCTGTTTCC 58.846 41.667 0.00 0.00 31.30 3.13
2327 6620 5.154222 GCCAAACTCTAAAATCTGTTTCCG 58.846 41.667 0.00 0.00 31.30 4.30
2328 6621 5.278315 GCCAAACTCTAAAATCTGTTTCCGT 60.278 40.000 0.00 0.00 31.30 4.69
2329 6622 6.371389 CCAAACTCTAAAATCTGTTTCCGTC 58.629 40.000 0.00 0.00 31.30 4.79
2330 6623 6.017440 CCAAACTCTAAAATCTGTTTCCGTCA 60.017 38.462 0.00 0.00 31.30 4.35
2331 6624 7.308589 CCAAACTCTAAAATCTGTTTCCGTCAT 60.309 37.037 0.00 0.00 31.30 3.06
2332 6625 6.727824 ACTCTAAAATCTGTTTCCGTCATG 57.272 37.500 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.680619 ACACTTCTGTTAGGATCACACAAA 58.319 37.500 0.00 0.00 0.00 2.83
1 2 5.290493 ACACTTCTGTTAGGATCACACAA 57.710 39.130 0.00 0.00 0.00 3.33
4 5 5.419155 CCTCTACACTTCTGTTAGGATCACA 59.581 44.000 0.00 0.00 35.63 3.58
6 7 5.827756 TCCTCTACACTTCTGTTAGGATCA 58.172 41.667 0.00 0.00 36.84 2.92
7 8 6.123651 TCTCCTCTACACTTCTGTTAGGATC 58.876 44.000 0.00 0.00 39.16 3.36
8 9 6.080969 TCTCCTCTACACTTCTGTTAGGAT 57.919 41.667 0.00 0.00 39.16 3.24
9 10 5.516059 TCTCCTCTACACTTCTGTTAGGA 57.484 43.478 0.00 0.00 38.29 2.94
10 11 6.015350 TGTTTCTCCTCTACACTTCTGTTAGG 60.015 42.308 0.00 0.00 35.22 2.69
163 3736 6.088616 CGAGAAACTTGAAGGCATGATTTTTC 59.911 38.462 0.00 0.00 0.00 2.29
180 3753 8.499162 CATTTCTCTAAACATGTTCGAGAAACT 58.501 33.333 36.84 29.11 43.47 2.66
222 3795 7.439108 TTTTTCTTTGGATTCCTAAAACCCA 57.561 32.000 3.95 0.00 0.00 4.51
255 3830 1.816224 GGCGAGCCAGGTTTATGAAAA 59.184 47.619 9.58 0.00 35.81 2.29
273 3848 4.929146 AATTGGGATACTAGTATGGGGC 57.071 45.455 20.13 5.52 0.00 5.80
285 3860 5.010719 CGAGCTTACTGTCCTAATTGGGATA 59.989 44.000 14.30 10.48 37.73 2.59
287 3862 3.132289 CGAGCTTACTGTCCTAATTGGGA 59.868 47.826 6.42 6.42 36.20 4.37
313 3889 4.985409 TGCGACTTGTGTTGTTTTTCTTTT 59.015 33.333 0.00 0.00 0.00 2.27
363 3940 4.525912 AATTCCACAAAGAGGCAACATC 57.474 40.909 0.00 0.00 41.41 3.06
505 4115 3.616821 TGTCACATTGATTTCGGACGATC 59.383 43.478 0.00 0.00 0.00 3.69
525 4135 2.661176 TCTCTGGAAATAGGGGGTGT 57.339 50.000 0.00 0.00 0.00 4.16
538 4148 8.364142 TGGTTTGGTTTGTAATTATTTCTCTGG 58.636 33.333 0.00 0.00 0.00 3.86
563 4173 7.041916 GCTTCTGTAAGATTTCAGATCCTGATG 60.042 40.741 3.19 0.00 46.36 3.07
784 4450 2.262603 CTGGCAGCACGTCAGCTA 59.737 61.111 0.00 0.00 44.54 3.32
854 4520 2.697425 CGCTGATTGCTCGGAACG 59.303 61.111 0.00 0.00 45.48 3.95
855 4521 2.401195 GCGCTGATTGCTCGGAAC 59.599 61.111 0.00 0.00 40.11 3.62
887 4553 1.816835 CTGTACGTGAGCTCTTGGGTA 59.183 52.381 16.19 8.70 0.00 3.69
900 4566 2.299013 TGGATGTCTTGCTTCTGTACGT 59.701 45.455 0.00 0.00 0.00 3.57
901 4567 2.668457 GTGGATGTCTTGCTTCTGTACG 59.332 50.000 0.00 0.00 0.00 3.67
902 4568 2.668457 CGTGGATGTCTTGCTTCTGTAC 59.332 50.000 0.00 0.00 0.00 2.90
903 4569 2.353704 CCGTGGATGTCTTGCTTCTGTA 60.354 50.000 0.00 0.00 0.00 2.74
907 4573 1.734465 CTTCCGTGGATGTCTTGCTTC 59.266 52.381 0.00 0.00 0.00 3.86
918 4584 4.098960 GTGTGGATATAGTTCTTCCGTGGA 59.901 45.833 0.00 0.00 31.90 4.02
923 4589 4.098960 TGGTCGTGTGGATATAGTTCTTCC 59.901 45.833 0.00 0.00 0.00 3.46
985 4651 0.388006 TGCATCGTGTAGTGTGTCGG 60.388 55.000 0.00 0.00 0.00 4.79
1019 4691 1.687612 CTCACCATGTCCTTGGCCT 59.312 57.895 3.32 0.00 40.68 5.19
1119 4791 0.627986 CCTCCTTGGCCATCTCCTTT 59.372 55.000 6.09 0.00 0.00 3.11
1175 4847 4.020617 CGGCCTTCTCCTGGTGCA 62.021 66.667 0.00 0.00 0.00 4.57
1337 5021 1.811025 TAGACCCTGCTCCCCTCACA 61.811 60.000 0.00 0.00 0.00 3.58
1339 5023 1.001760 GTAGACCCTGCTCCCCTCA 59.998 63.158 0.00 0.00 0.00 3.86
1340 5024 1.762858 GGTAGACCCTGCTCCCCTC 60.763 68.421 0.00 0.00 0.00 4.30
1357 5041 2.354805 GGGCAGGTTACAGACTACAAGG 60.355 54.545 0.00 0.00 0.00 3.61
1361 5045 0.893447 ACGGGCAGGTTACAGACTAC 59.107 55.000 0.00 0.00 0.00 2.73
1426 5719 2.922740 TTCTATTCCGGTACATGGGC 57.077 50.000 0.00 0.00 0.00 5.36
1434 5727 5.221722 ACAGCATGATACATTCTATTCCGGT 60.222 40.000 0.00 0.00 39.69 5.28
1443 5736 5.916883 GCACCATTTACAGCATGATACATTC 59.083 40.000 0.00 0.00 39.69 2.67
1455 5748 3.009723 ACATCGAAGGCACCATTTACAG 58.990 45.455 0.00 0.00 0.00 2.74
1483 5776 5.233476 TCGAACTTCATACAACAACACTCAC 59.767 40.000 0.00 0.00 0.00 3.51
1551 5844 5.052481 ACGTTTACTAGTGTTTTGAGGGTC 58.948 41.667 5.39 0.00 0.00 4.46
1566 5859 1.758280 TGTGTGGTCTGGACGTTTACT 59.242 47.619 0.00 0.00 0.00 2.24
1577 5870 1.046472 TTGAGGGACGTGTGTGGTCT 61.046 55.000 0.00 0.00 34.82 3.85
1595 5888 4.202070 CGTCCTAACATTTGTGGGTGTTTT 60.202 41.667 0.00 0.00 39.18 2.43
1605 5898 4.214545 TGGCAAACTACGTCCTAACATTTG 59.785 41.667 0.00 0.00 0.00 2.32
1609 5902 3.592059 GATGGCAAACTACGTCCTAACA 58.408 45.455 0.00 0.00 0.00 2.41
1610 5903 2.934553 GGATGGCAAACTACGTCCTAAC 59.065 50.000 0.00 0.00 39.24 2.34
1611 5904 2.568062 TGGATGGCAAACTACGTCCTAA 59.432 45.455 0.00 0.00 42.12 2.69
1612 5905 2.167693 CTGGATGGCAAACTACGTCCTA 59.832 50.000 0.00 0.00 42.12 2.94
1613 5906 0.981183 TGGATGGCAAACTACGTCCT 59.019 50.000 0.00 0.00 42.12 3.85
1614 5907 1.066430 TCTGGATGGCAAACTACGTCC 60.066 52.381 0.00 0.00 42.00 4.79
1615 5908 2.000447 GTCTGGATGGCAAACTACGTC 59.000 52.381 0.00 0.00 0.00 4.34
1618 5911 1.740025 GCAGTCTGGATGGCAAACTAC 59.260 52.381 1.14 0.00 0.00 2.73
1619 5912 1.675714 CGCAGTCTGGATGGCAAACTA 60.676 52.381 1.14 0.00 0.00 2.24
1621 5914 1.503542 CGCAGTCTGGATGGCAAAC 59.496 57.895 1.14 0.00 0.00 2.93
1622 5915 1.675310 CCGCAGTCTGGATGGCAAA 60.675 57.895 1.14 0.00 0.00 3.68
1623 5916 2.046023 CCGCAGTCTGGATGGCAA 60.046 61.111 1.14 0.00 0.00 4.52
1624 5917 3.002583 TCCGCAGTCTGGATGGCA 61.003 61.111 1.14 0.00 0.00 4.92
1625 5918 2.202987 CTCCGCAGTCTGGATGGC 60.203 66.667 1.14 0.00 34.32 4.40
1626 5919 0.460987 GAACTCCGCAGTCTGGATGG 60.461 60.000 1.14 0.00 34.32 3.51
1627 5920 0.247460 TGAACTCCGCAGTCTGGATG 59.753 55.000 1.14 0.00 34.32 3.51
1628 5921 0.534412 CTGAACTCCGCAGTCTGGAT 59.466 55.000 1.14 0.00 34.32 3.41
1629 5922 0.539669 TCTGAACTCCGCAGTCTGGA 60.540 55.000 1.14 0.00 34.98 3.86
1630 5923 0.534412 ATCTGAACTCCGCAGTCTGG 59.466 55.000 1.14 0.00 34.98 3.86
1631 5924 1.067283 ACATCTGAACTCCGCAGTCTG 60.067 52.381 0.00 0.00 34.98 3.51
1632 5925 1.261480 ACATCTGAACTCCGCAGTCT 58.739 50.000 0.00 0.00 34.98 3.24
1633 5926 2.164624 ACTACATCTGAACTCCGCAGTC 59.835 50.000 0.00 0.00 34.98 3.51
1634 5927 2.171840 ACTACATCTGAACTCCGCAGT 58.828 47.619 0.00 0.00 34.98 4.40
1635 5928 2.949451 ACTACATCTGAACTCCGCAG 57.051 50.000 0.00 0.00 34.71 5.18
1636 5929 2.415491 CGAACTACATCTGAACTCCGCA 60.415 50.000 0.00 0.00 0.00 5.69
1637 5930 2.186076 CGAACTACATCTGAACTCCGC 58.814 52.381 0.00 0.00 0.00 5.54
1638 5931 2.186076 GCGAACTACATCTGAACTCCG 58.814 52.381 0.00 0.00 0.00 4.63
1639 5932 2.094182 TGGCGAACTACATCTGAACTCC 60.094 50.000 0.00 0.00 0.00 3.85
1662 5955 4.634004 ACAGACAATTAAAATCCGCATCGA 59.366 37.500 0.00 0.00 0.00 3.59
1673 5966 8.465999 ACAAGAACATGTTCACAGACAATTAAA 58.534 29.630 33.92 0.00 41.84 1.52
1696 5989 3.577649 TTGCAGAAAAACCGAACACAA 57.422 38.095 0.00 0.00 0.00 3.33
1719 6012 2.026641 ACATCCCCTGATTTGCATTCG 58.973 47.619 0.00 0.00 0.00 3.34
1721 6014 4.776837 TGTAAACATCCCCTGATTTGCATT 59.223 37.500 0.00 0.00 0.00 3.56
1732 6025 5.270893 ACACAAAAACTGTAAACATCCCC 57.729 39.130 0.00 0.00 36.10 4.81
1733 6026 6.592220 ACAAACACAAAAACTGTAAACATCCC 59.408 34.615 0.00 0.00 36.10 3.85
1748 6041 7.525688 TGCATTCGATTAAAACAAACACAAA 57.474 28.000 0.00 0.00 0.00 2.83
1762 6055 3.017048 TCCCCTGATTTGCATTCGATT 57.983 42.857 0.00 0.00 0.00 3.34
1763 6056 2.734755 TCCCCTGATTTGCATTCGAT 57.265 45.000 0.00 0.00 0.00 3.59
1765 6058 2.026641 ACATCCCCTGATTTGCATTCG 58.973 47.619 0.00 0.00 0.00 3.34
1766 6059 4.476628 AAACATCCCCTGATTTGCATTC 57.523 40.909 0.00 0.00 0.00 2.67
1767 6060 4.776837 TGTAAACATCCCCTGATTTGCATT 59.223 37.500 0.00 0.00 0.00 3.56
1768 6061 4.352009 TGTAAACATCCCCTGATTTGCAT 58.648 39.130 0.00 0.00 0.00 3.96
1769 6062 3.763360 CTGTAAACATCCCCTGATTTGCA 59.237 43.478 0.00 0.00 0.00 4.08
1770 6063 3.429410 GCTGTAAACATCCCCTGATTTGC 60.429 47.826 0.00 0.00 0.00 3.68
1771 6064 4.019174 AGCTGTAAACATCCCCTGATTTG 58.981 43.478 0.00 0.00 0.00 2.32
1772 6065 4.322057 AGCTGTAAACATCCCCTGATTT 57.678 40.909 0.00 0.00 0.00 2.17
1773 6066 4.322057 AAGCTGTAAACATCCCCTGATT 57.678 40.909 0.00 0.00 0.00 2.57
1774 6067 4.322057 AAAGCTGTAAACATCCCCTGAT 57.678 40.909 0.00 0.00 0.00 2.90
1775 6068 3.806949 AAAGCTGTAAACATCCCCTGA 57.193 42.857 0.00 0.00 0.00 3.86
1776 6069 3.573967 ACAAAAGCTGTAAACATCCCCTG 59.426 43.478 0.00 0.00 36.10 4.45
1777 6070 3.573967 CACAAAAGCTGTAAACATCCCCT 59.426 43.478 0.00 0.00 36.10 4.79
1778 6071 3.320826 ACACAAAAGCTGTAAACATCCCC 59.679 43.478 0.00 0.00 36.10 4.81
1779 6072 4.584327 ACACAAAAGCTGTAAACATCCC 57.416 40.909 0.00 0.00 36.10 3.85
1780 6073 5.810074 ACAAACACAAAAGCTGTAAACATCC 59.190 36.000 0.00 0.00 36.10 3.51
1781 6074 6.885735 ACAAACACAAAAGCTGTAAACATC 57.114 33.333 0.00 0.00 36.10 3.06
1782 6075 7.665561 AAACAAACACAAAAGCTGTAAACAT 57.334 28.000 0.00 0.00 36.10 2.71
1783 6076 7.307455 GGAAAACAAACACAAAAGCTGTAAACA 60.307 33.333 0.00 0.00 36.10 2.83
1784 6077 7.012943 GGAAAACAAACACAAAAGCTGTAAAC 58.987 34.615 0.00 0.00 36.10 2.01
1785 6078 6.147985 GGGAAAACAAACACAAAAGCTGTAAA 59.852 34.615 0.00 0.00 36.10 2.01
1786 6079 5.639931 GGGAAAACAAACACAAAAGCTGTAA 59.360 36.000 0.00 0.00 36.10 2.41
1787 6080 5.172205 GGGAAAACAAACACAAAAGCTGTA 58.828 37.500 0.00 0.00 36.10 2.74
1788 6081 4.000325 GGGAAAACAAACACAAAAGCTGT 59.000 39.130 0.00 0.00 39.56 4.40
1789 6082 3.061965 CGGGAAAACAAACACAAAAGCTG 59.938 43.478 0.00 0.00 0.00 4.24
1790 6083 3.258228 CGGGAAAACAAACACAAAAGCT 58.742 40.909 0.00 0.00 0.00 3.74
1791 6084 2.222931 GCGGGAAAACAAACACAAAAGC 60.223 45.455 0.00 0.00 0.00 3.51
1792 6085 2.996621 TGCGGGAAAACAAACACAAAAG 59.003 40.909 0.00 0.00 0.00 2.27
1793 6086 3.040147 TGCGGGAAAACAAACACAAAA 57.960 38.095 0.00 0.00 0.00 2.44
1794 6087 2.743636 TGCGGGAAAACAAACACAAA 57.256 40.000 0.00 0.00 0.00 2.83
1795 6088 2.743636 TTGCGGGAAAACAAACACAA 57.256 40.000 0.00 0.00 0.00 3.33
1796 6089 2.743636 TTTGCGGGAAAACAAACACA 57.256 40.000 0.00 0.00 31.09 3.72
1797 6090 3.453424 AGATTTGCGGGAAAACAAACAC 58.547 40.909 0.00 0.00 38.50 3.32
1798 6091 3.810310 AGATTTGCGGGAAAACAAACA 57.190 38.095 0.00 0.00 38.50 2.83
1799 6092 6.589454 CAAATAGATTTGCGGGAAAACAAAC 58.411 36.000 0.00 0.00 40.42 2.93
1800 6093 6.777526 CAAATAGATTTGCGGGAAAACAAA 57.222 33.333 0.00 0.00 40.42 2.83
1821 6114 1.069358 GGCCGATTTGTGGGAAAACAA 59.931 47.619 0.00 0.00 38.26 2.83
1822 6115 0.676736 GGCCGATTTGTGGGAAAACA 59.323 50.000 0.00 0.00 0.00 2.83
1823 6116 0.388006 CGGCCGATTTGTGGGAAAAC 60.388 55.000 24.07 0.00 0.00 2.43
1824 6117 0.537600 TCGGCCGATTTGTGGGAAAA 60.538 50.000 27.28 0.00 0.00 2.29
1825 6118 1.073373 TCGGCCGATTTGTGGGAAA 59.927 52.632 27.28 0.00 0.00 3.13
1826 6119 1.673009 GTCGGCCGATTTGTGGGAA 60.673 57.895 33.58 0.18 0.00 3.97
1827 6120 2.046700 GTCGGCCGATTTGTGGGA 60.047 61.111 33.58 1.12 0.00 4.37
1828 6121 1.312371 AATGTCGGCCGATTTGTGGG 61.312 55.000 33.58 0.00 0.00 4.61
1829 6122 0.525761 AAATGTCGGCCGATTTGTGG 59.474 50.000 33.58 0.00 0.00 4.17
1830 6123 1.467374 GGAAATGTCGGCCGATTTGTG 60.467 52.381 33.58 0.00 0.00 3.33
1831 6124 0.808755 GGAAATGTCGGCCGATTTGT 59.191 50.000 33.58 17.15 0.00 2.83
1832 6125 0.100503 GGGAAATGTCGGCCGATTTG 59.899 55.000 33.58 0.00 0.00 2.32
1833 6126 1.373590 CGGGAAATGTCGGCCGATTT 61.374 55.000 33.58 27.65 32.13 2.17
1834 6127 1.817941 CGGGAAATGTCGGCCGATT 60.818 57.895 33.58 22.29 32.13 3.34
1835 6128 2.203015 CGGGAAATGTCGGCCGAT 60.203 61.111 33.58 16.21 32.13 4.18
1838 6131 1.944234 ATTTGCGGGAAATGTCGGCC 61.944 55.000 6.68 0.00 32.69 6.13
1839 6132 0.525455 GATTTGCGGGAAATGTCGGC 60.525 55.000 12.37 0.00 34.18 5.54
1840 6133 0.248054 CGATTTGCGGGAAATGTCGG 60.248 55.000 12.37 0.00 34.18 4.79
1841 6134 3.218721 CGATTTGCGGGAAATGTCG 57.781 52.632 12.37 7.79 34.18 4.35
1908 6201 6.373759 AGGGAAGGTTTTAGACACAAGAATT 58.626 36.000 0.00 0.00 0.00 2.17
1909 6202 5.953571 AGGGAAGGTTTTAGACACAAGAAT 58.046 37.500 0.00 0.00 0.00 2.40
1910 6203 5.382664 AGGGAAGGTTTTAGACACAAGAA 57.617 39.130 0.00 0.00 0.00 2.52
1911 6204 5.382664 AAGGGAAGGTTTTAGACACAAGA 57.617 39.130 0.00 0.00 0.00 3.02
1912 6205 6.461092 GGAAAAGGGAAGGTTTTAGACACAAG 60.461 42.308 0.00 0.00 0.00 3.16
1913 6206 5.361571 GGAAAAGGGAAGGTTTTAGACACAA 59.638 40.000 0.00 0.00 0.00 3.33
1914 6207 4.891168 GGAAAAGGGAAGGTTTTAGACACA 59.109 41.667 0.00 0.00 0.00 3.72
1915 6208 4.280174 GGGAAAAGGGAAGGTTTTAGACAC 59.720 45.833 0.00 0.00 0.00 3.67
1916 6209 4.476297 GGGAAAAGGGAAGGTTTTAGACA 58.524 43.478 0.00 0.00 0.00 3.41
1917 6210 3.504906 CGGGAAAAGGGAAGGTTTTAGAC 59.495 47.826 0.00 0.00 0.00 2.59
1918 6211 3.758425 CGGGAAAAGGGAAGGTTTTAGA 58.242 45.455 0.00 0.00 0.00 2.10
1919 6212 2.230508 GCGGGAAAAGGGAAGGTTTTAG 59.769 50.000 0.00 0.00 0.00 1.85
1920 6213 2.241160 GCGGGAAAAGGGAAGGTTTTA 58.759 47.619 0.00 0.00 0.00 1.52
1921 6214 1.045407 GCGGGAAAAGGGAAGGTTTT 58.955 50.000 0.00 0.00 0.00 2.43
1922 6215 0.105913 TGCGGGAAAAGGGAAGGTTT 60.106 50.000 0.00 0.00 0.00 3.27
1923 6216 0.105913 TTGCGGGAAAAGGGAAGGTT 60.106 50.000 0.00 0.00 0.00 3.50
1924 6217 0.105913 TTTGCGGGAAAAGGGAAGGT 60.106 50.000 0.00 0.00 0.00 3.50
1925 6218 1.204704 GATTTGCGGGAAAAGGGAAGG 59.795 52.381 0.00 0.00 0.00 3.46
1926 6219 1.892474 TGATTTGCGGGAAAAGGGAAG 59.108 47.619 0.00 0.00 0.00 3.46
1927 6220 1.892474 CTGATTTGCGGGAAAAGGGAA 59.108 47.619 0.00 0.00 0.00 3.97
1928 6221 1.074727 TCTGATTTGCGGGAAAAGGGA 59.925 47.619 0.00 0.00 0.00 4.20
1929 6222 1.202348 GTCTGATTTGCGGGAAAAGGG 59.798 52.381 0.00 0.00 0.00 3.95
1930 6223 1.135689 CGTCTGATTTGCGGGAAAAGG 60.136 52.381 0.00 0.00 0.00 3.11
1931 6224 1.729149 GCGTCTGATTTGCGGGAAAAG 60.729 52.381 0.00 0.00 0.00 2.27
1932 6225 0.239879 GCGTCTGATTTGCGGGAAAA 59.760 50.000 0.00 0.00 0.00 2.29
1933 6226 0.886938 TGCGTCTGATTTGCGGGAAA 60.887 50.000 0.00 0.00 0.00 3.13
1934 6227 1.302112 TGCGTCTGATTTGCGGGAA 60.302 52.632 0.00 0.00 0.00 3.97
1935 6228 2.032634 GTGCGTCTGATTTGCGGGA 61.033 57.895 0.00 0.00 0.00 5.14
1936 6229 1.851021 TTGTGCGTCTGATTTGCGGG 61.851 55.000 0.00 0.00 0.00 6.13
1937 6230 0.040514 TTTGTGCGTCTGATTTGCGG 60.041 50.000 0.00 0.00 0.00 5.69
1938 6231 1.967762 ATTTGTGCGTCTGATTTGCG 58.032 45.000 0.00 0.00 0.00 4.85
1939 6232 4.722194 TCTAATTTGTGCGTCTGATTTGC 58.278 39.130 0.00 0.00 0.00 3.68
1940 6233 7.148918 CCTTTTCTAATTTGTGCGTCTGATTTG 60.149 37.037 0.00 0.00 0.00 2.32
1941 6234 6.863126 CCTTTTCTAATTTGTGCGTCTGATTT 59.137 34.615 0.00 0.00 0.00 2.17
1942 6235 6.381801 CCTTTTCTAATTTGTGCGTCTGATT 58.618 36.000 0.00 0.00 0.00 2.57
1943 6236 5.106157 CCCTTTTCTAATTTGTGCGTCTGAT 60.106 40.000 0.00 0.00 0.00 2.90
1944 6237 4.215399 CCCTTTTCTAATTTGTGCGTCTGA 59.785 41.667 0.00 0.00 0.00 3.27
1945 6238 4.475944 CCCTTTTCTAATTTGTGCGTCTG 58.524 43.478 0.00 0.00 0.00 3.51
1946 6239 3.057526 GCCCTTTTCTAATTTGTGCGTCT 60.058 43.478 0.00 0.00 0.00 4.18
1947 6240 3.057526 AGCCCTTTTCTAATTTGTGCGTC 60.058 43.478 0.00 0.00 0.00 5.19
1948 6241 2.890945 AGCCCTTTTCTAATTTGTGCGT 59.109 40.909 0.00 0.00 0.00 5.24
1949 6242 3.057596 TCAGCCCTTTTCTAATTTGTGCG 60.058 43.478 0.00 0.00 0.00 5.34
1950 6243 4.237724 GTCAGCCCTTTTCTAATTTGTGC 58.762 43.478 0.00 0.00 0.00 4.57
1951 6244 5.452078 TGTCAGCCCTTTTCTAATTTGTG 57.548 39.130 0.00 0.00 0.00 3.33
1952 6245 6.478512 TTTGTCAGCCCTTTTCTAATTTGT 57.521 33.333 0.00 0.00 0.00 2.83
1953 6246 7.967890 AATTTGTCAGCCCTTTTCTAATTTG 57.032 32.000 0.00 0.00 0.00 2.32
1954 6247 7.812669 CGTAATTTGTCAGCCCTTTTCTAATTT 59.187 33.333 0.00 0.00 0.00 1.82
1955 6248 7.175990 TCGTAATTTGTCAGCCCTTTTCTAATT 59.824 33.333 0.00 0.00 0.00 1.40
1956 6249 6.657541 TCGTAATTTGTCAGCCCTTTTCTAAT 59.342 34.615 0.00 0.00 0.00 1.73
1957 6250 5.998981 TCGTAATTTGTCAGCCCTTTTCTAA 59.001 36.000 0.00 0.00 0.00 2.10
1958 6251 5.410439 GTCGTAATTTGTCAGCCCTTTTCTA 59.590 40.000 0.00 0.00 0.00 2.10
1959 6252 4.215613 GTCGTAATTTGTCAGCCCTTTTCT 59.784 41.667 0.00 0.00 0.00 2.52
1960 6253 4.023536 TGTCGTAATTTGTCAGCCCTTTTC 60.024 41.667 0.00 0.00 0.00 2.29
1961 6254 3.886505 TGTCGTAATTTGTCAGCCCTTTT 59.113 39.130 0.00 0.00 0.00 2.27
1962 6255 3.482436 TGTCGTAATTTGTCAGCCCTTT 58.518 40.909 0.00 0.00 0.00 3.11
1963 6256 3.074412 CTGTCGTAATTTGTCAGCCCTT 58.926 45.455 0.00 0.00 0.00 3.95
1964 6257 2.301870 TCTGTCGTAATTTGTCAGCCCT 59.698 45.455 0.00 0.00 0.00 5.19
1965 6258 2.415512 GTCTGTCGTAATTTGTCAGCCC 59.584 50.000 0.00 0.00 0.00 5.19
1966 6259 2.092211 CGTCTGTCGTAATTTGTCAGCC 59.908 50.000 0.00 0.00 34.52 4.85
1967 6260 2.984471 TCGTCTGTCGTAATTTGTCAGC 59.016 45.455 0.00 0.00 40.80 4.26
1968 6261 3.057739 CGTCGTCTGTCGTAATTTGTCAG 59.942 47.826 0.00 0.00 40.80 3.51
1969 6262 2.975193 CGTCGTCTGTCGTAATTTGTCA 59.025 45.455 0.00 0.00 40.80 3.58
1970 6263 2.340577 CCGTCGTCTGTCGTAATTTGTC 59.659 50.000 0.00 0.00 40.80 3.18
1971 6264 2.322161 CCGTCGTCTGTCGTAATTTGT 58.678 47.619 0.00 0.00 40.80 2.83
1972 6265 1.058695 GCCGTCGTCTGTCGTAATTTG 59.941 52.381 0.00 0.00 40.80 2.32
1973 6266 1.343506 GCCGTCGTCTGTCGTAATTT 58.656 50.000 0.00 0.00 40.80 1.82
1974 6267 0.795735 CGCCGTCGTCTGTCGTAATT 60.796 55.000 0.00 0.00 40.80 1.40
1975 6268 1.226211 CGCCGTCGTCTGTCGTAAT 60.226 57.895 0.00 0.00 40.80 1.89
1976 6269 2.174107 CGCCGTCGTCTGTCGTAA 59.826 61.111 0.00 0.00 40.80 3.18
1991 6284 2.349886 TGTTTGATTTGTGGCAAAACGC 59.650 40.909 0.00 0.00 35.95 4.84
1992 6285 3.369147 TGTGTTTGATTTGTGGCAAAACG 59.631 39.130 0.00 0.00 35.95 3.60
1993 6286 4.153117 TGTGTGTTTGATTTGTGGCAAAAC 59.847 37.500 0.00 0.00 35.95 2.43
1994 6287 4.318332 TGTGTGTTTGATTTGTGGCAAAA 58.682 34.783 0.00 0.00 35.95 2.44
1995 6288 3.930336 TGTGTGTTTGATTTGTGGCAAA 58.070 36.364 0.00 0.00 0.00 3.68
1996 6289 3.599730 TGTGTGTTTGATTTGTGGCAA 57.400 38.095 0.00 0.00 0.00 4.52
1997 6290 3.599730 TTGTGTGTTTGATTTGTGGCA 57.400 38.095 0.00 0.00 0.00 4.92
1998 6291 4.935885 TTTTGTGTGTTTGATTTGTGGC 57.064 36.364 0.00 0.00 0.00 5.01
1999 6292 7.254727 CCCTAATTTTGTGTGTTTGATTTGTGG 60.255 37.037 0.00 0.00 0.00 4.17
2000 6293 7.493971 TCCCTAATTTTGTGTGTTTGATTTGTG 59.506 33.333 0.00 0.00 0.00 3.33
2001 6294 7.560368 TCCCTAATTTTGTGTGTTTGATTTGT 58.440 30.769 0.00 0.00 0.00 2.83
2002 6295 8.430801 TTCCCTAATTTTGTGTGTTTGATTTG 57.569 30.769 0.00 0.00 0.00 2.32
2003 6296 9.054922 CATTCCCTAATTTTGTGTGTTTGATTT 57.945 29.630 0.00 0.00 0.00 2.17
2004 6297 8.210265 ACATTCCCTAATTTTGTGTGTTTGATT 58.790 29.630 0.00 0.00 0.00 2.57
2005 6298 7.734942 ACATTCCCTAATTTTGTGTGTTTGAT 58.265 30.769 0.00 0.00 0.00 2.57
2006 6299 7.069331 AGACATTCCCTAATTTTGTGTGTTTGA 59.931 33.333 0.00 0.00 0.00 2.69
2007 6300 7.169645 CAGACATTCCCTAATTTTGTGTGTTTG 59.830 37.037 0.00 0.00 29.76 2.93
2008 6301 7.069331 TCAGACATTCCCTAATTTTGTGTGTTT 59.931 33.333 0.00 0.00 34.34 2.83
2009 6302 6.549364 TCAGACATTCCCTAATTTTGTGTGTT 59.451 34.615 0.00 0.00 34.34 3.32
2010 6303 6.068010 TCAGACATTCCCTAATTTTGTGTGT 58.932 36.000 0.00 0.00 34.34 3.72
2011 6304 6.573664 TCAGACATTCCCTAATTTTGTGTG 57.426 37.500 0.00 0.00 34.08 3.82
2012 6305 8.877864 TTATCAGACATTCCCTAATTTTGTGT 57.122 30.769 0.00 0.00 0.00 3.72
2018 6311 9.813826 CCCTAATTTATCAGACATTCCCTAATT 57.186 33.333 0.00 0.00 0.00 1.40
2019 6312 9.182642 TCCCTAATTTATCAGACATTCCCTAAT 57.817 33.333 0.00 0.00 0.00 1.73
2020 6313 8.575736 TCCCTAATTTATCAGACATTCCCTAA 57.424 34.615 0.00 0.00 0.00 2.69
2021 6314 8.575736 TTCCCTAATTTATCAGACATTCCCTA 57.424 34.615 0.00 0.00 0.00 3.53
2022 6315 7.421853 CCTTCCCTAATTTATCAGACATTCCCT 60.422 40.741 0.00 0.00 0.00 4.20
2023 6316 6.717084 CCTTCCCTAATTTATCAGACATTCCC 59.283 42.308 0.00 0.00 0.00 3.97
2024 6317 7.290813 ACCTTCCCTAATTTATCAGACATTCC 58.709 38.462 0.00 0.00 0.00 3.01
2025 6318 8.624776 CAACCTTCCCTAATTTATCAGACATTC 58.375 37.037 0.00 0.00 0.00 2.67
2026 6319 7.068716 GCAACCTTCCCTAATTTATCAGACATT 59.931 37.037 0.00 0.00 0.00 2.71
2027 6320 6.547510 GCAACCTTCCCTAATTTATCAGACAT 59.452 38.462 0.00 0.00 0.00 3.06
2028 6321 5.885912 GCAACCTTCCCTAATTTATCAGACA 59.114 40.000 0.00 0.00 0.00 3.41
2029 6322 5.299531 GGCAACCTTCCCTAATTTATCAGAC 59.700 44.000 0.00 0.00 0.00 3.51
2030 6323 5.445964 GGCAACCTTCCCTAATTTATCAGA 58.554 41.667 0.00 0.00 0.00 3.27
2031 6324 5.774498 GGCAACCTTCCCTAATTTATCAG 57.226 43.478 0.00 0.00 0.00 2.90
2048 6341 0.955905 TTTAGAGTTTGGCGGGCAAC 59.044 50.000 17.22 11.85 0.00 4.17
2049 6342 1.338655 GTTTTAGAGTTTGGCGGGCAA 59.661 47.619 13.46 13.46 0.00 4.52
2050 6343 0.955905 GTTTTAGAGTTTGGCGGGCA 59.044 50.000 0.00 0.00 0.00 5.36
2051 6344 0.242825 GGTTTTAGAGTTTGGCGGGC 59.757 55.000 0.00 0.00 0.00 6.13
2052 6345 1.905637 AGGTTTTAGAGTTTGGCGGG 58.094 50.000 0.00 0.00 0.00 6.13
2053 6346 5.392703 GGAATAAGGTTTTAGAGTTTGGCGG 60.393 44.000 0.00 0.00 0.00 6.13
2054 6347 5.182380 TGGAATAAGGTTTTAGAGTTTGGCG 59.818 40.000 0.00 0.00 0.00 5.69
2055 6348 6.584185 TGGAATAAGGTTTTAGAGTTTGGC 57.416 37.500 0.00 0.00 0.00 4.52
2056 6349 9.639601 GAATTGGAATAAGGTTTTAGAGTTTGG 57.360 33.333 0.00 0.00 0.00 3.28
2107 6400 2.554032 CGGGAAAAGAGACACAAGCATT 59.446 45.455 0.00 0.00 0.00 3.56
2108 6401 2.154462 CGGGAAAAGAGACACAAGCAT 58.846 47.619 0.00 0.00 0.00 3.79
2109 6402 1.593196 CGGGAAAAGAGACACAAGCA 58.407 50.000 0.00 0.00 0.00 3.91
2110 6403 0.238553 GCGGGAAAAGAGACACAAGC 59.761 55.000 0.00 0.00 0.00 4.01
2111 6404 1.593196 TGCGGGAAAAGAGACACAAG 58.407 50.000 0.00 0.00 0.00 3.16
2112 6405 2.045561 TTGCGGGAAAAGAGACACAA 57.954 45.000 0.00 0.00 0.00 3.33
2113 6406 2.045561 TTTGCGGGAAAAGAGACACA 57.954 45.000 0.00 0.00 0.00 3.72
2114 6407 2.552315 TGATTTGCGGGAAAAGAGACAC 59.448 45.455 0.00 0.00 0.00 3.67
2115 6408 2.857483 TGATTTGCGGGAAAAGAGACA 58.143 42.857 0.00 0.00 0.00 3.41
2116 6409 3.915437 TTGATTTGCGGGAAAAGAGAC 57.085 42.857 0.00 0.00 0.00 3.36
2117 6410 3.634448 TGTTTGATTTGCGGGAAAAGAGA 59.366 39.130 0.00 0.00 0.00 3.10
2118 6411 3.735746 GTGTTTGATTTGCGGGAAAAGAG 59.264 43.478 0.00 0.00 0.00 2.85
2119 6412 3.131223 TGTGTTTGATTTGCGGGAAAAGA 59.869 39.130 0.00 0.00 0.00 2.52
2120 6413 3.245048 GTGTGTTTGATTTGCGGGAAAAG 59.755 43.478 0.00 0.00 0.00 2.27
2121 6414 3.190874 GTGTGTTTGATTTGCGGGAAAA 58.809 40.909 0.00 0.00 0.00 2.29
2122 6415 2.166459 TGTGTGTTTGATTTGCGGGAAA 59.834 40.909 0.00 0.00 0.00 3.13
2123 6416 1.751351 TGTGTGTTTGATTTGCGGGAA 59.249 42.857 0.00 0.00 0.00 3.97
2124 6417 1.393603 TGTGTGTTTGATTTGCGGGA 58.606 45.000 0.00 0.00 0.00 5.14
2125 6418 2.215907 TTGTGTGTTTGATTTGCGGG 57.784 45.000 0.00 0.00 0.00 6.13
2126 6419 4.792528 AATTTGTGTGTTTGATTTGCGG 57.207 36.364 0.00 0.00 0.00 5.69
2127 6420 5.689514 TCCTAATTTGTGTGTTTGATTTGCG 59.310 36.000 0.00 0.00 0.00 4.85
2128 6421 6.073819 GGTCCTAATTTGTGTGTTTGATTTGC 60.074 38.462 0.00 0.00 0.00 3.68
2129 6422 7.209475 AGGTCCTAATTTGTGTGTTTGATTTG 58.791 34.615 0.00 0.00 0.00 2.32
2130 6423 7.360113 AGGTCCTAATTTGTGTGTTTGATTT 57.640 32.000 0.00 0.00 0.00 2.17
2131 6424 6.976934 AGGTCCTAATTTGTGTGTTTGATT 57.023 33.333 0.00 0.00 0.00 2.57
2132 6425 6.976934 AAGGTCCTAATTTGTGTGTTTGAT 57.023 33.333 0.00 0.00 0.00 2.57
2133 6426 8.472007 AATAAGGTCCTAATTTGTGTGTTTGA 57.528 30.769 0.00 0.00 0.00 2.69
2164 6457 0.178975 TTGCGGGGGACACAAGAATT 60.179 50.000 0.00 0.00 0.00 2.17
2165 6458 0.178975 TTTGCGGGGGACACAAGAAT 60.179 50.000 0.00 0.00 30.81 2.40
2166 6459 0.178975 ATTTGCGGGGGACACAAGAA 60.179 50.000 0.00 0.00 30.81 2.52
2167 6460 0.608035 GATTTGCGGGGGACACAAGA 60.608 55.000 0.00 0.00 30.81 3.02
2168 6461 0.893270 TGATTTGCGGGGGACACAAG 60.893 55.000 0.00 0.00 30.81 3.16
2169 6462 0.468214 TTGATTTGCGGGGGACACAA 60.468 50.000 0.00 0.00 0.00 3.33
2170 6463 0.468214 TTTGATTTGCGGGGGACACA 60.468 50.000 0.00 0.00 0.00 3.72
2171 6464 0.038618 GTTTGATTTGCGGGGGACAC 60.039 55.000 0.00 0.00 0.00 3.67
2172 6465 0.468214 TGTTTGATTTGCGGGGGACA 60.468 50.000 0.00 0.00 0.00 4.02
2173 6466 0.038618 GTGTTTGATTTGCGGGGGAC 60.039 55.000 0.00 0.00 0.00 4.46
2174 6467 0.468214 TGTGTTTGATTTGCGGGGGA 60.468 50.000 0.00 0.00 0.00 4.81
2175 6468 0.319469 GTGTGTTTGATTTGCGGGGG 60.319 55.000 0.00 0.00 0.00 5.40
2176 6469 0.387202 TGTGTGTTTGATTTGCGGGG 59.613 50.000 0.00 0.00 0.00 5.73
2177 6470 2.215907 TTGTGTGTTTGATTTGCGGG 57.784 45.000 0.00 0.00 0.00 6.13
2178 6471 4.792528 AATTTGTGTGTTTGATTTGCGG 57.207 36.364 0.00 0.00 0.00 5.69
2179 6472 5.689514 TCCTAATTTGTGTGTTTGATTTGCG 59.310 36.000 0.00 0.00 0.00 4.85
2180 6473 7.475771 TTCCTAATTTGTGTGTTTGATTTGC 57.524 32.000 0.00 0.00 0.00 3.68
2181 6474 8.550376 CCTTTCCTAATTTGTGTGTTTGATTTG 58.450 33.333 0.00 0.00 0.00 2.32
2182 6475 7.226523 GCCTTTCCTAATTTGTGTGTTTGATTT 59.773 33.333 0.00 0.00 0.00 2.17
2183 6476 6.705825 GCCTTTCCTAATTTGTGTGTTTGATT 59.294 34.615 0.00 0.00 0.00 2.57
2184 6477 6.223120 GCCTTTCCTAATTTGTGTGTTTGAT 58.777 36.000 0.00 0.00 0.00 2.57
2185 6478 5.452636 GGCCTTTCCTAATTTGTGTGTTTGA 60.453 40.000 0.00 0.00 0.00 2.69
2186 6479 4.749598 GGCCTTTCCTAATTTGTGTGTTTG 59.250 41.667 0.00 0.00 0.00 2.93
2187 6480 4.202315 GGGCCTTTCCTAATTTGTGTGTTT 60.202 41.667 0.84 0.00 34.39 2.83
2188 6481 3.323691 GGGCCTTTCCTAATTTGTGTGTT 59.676 43.478 0.84 0.00 34.39 3.32
2189 6482 2.897326 GGGCCTTTCCTAATTTGTGTGT 59.103 45.455 0.84 0.00 34.39 3.72
2190 6483 2.094752 CGGGCCTTTCCTAATTTGTGTG 60.095 50.000 0.84 0.00 34.39 3.82
2191 6484 2.167662 CGGGCCTTTCCTAATTTGTGT 58.832 47.619 0.84 0.00 34.39 3.72
2192 6485 2.163613 GTCGGGCCTTTCCTAATTTGTG 59.836 50.000 0.84 0.00 34.39 3.33
2193 6486 2.224917 TGTCGGGCCTTTCCTAATTTGT 60.225 45.455 0.84 0.00 34.39 2.83
2194 6487 2.442413 TGTCGGGCCTTTCCTAATTTG 58.558 47.619 0.84 0.00 34.39 2.32
2195 6488 2.891191 TGTCGGGCCTTTCCTAATTT 57.109 45.000 0.84 0.00 34.39 1.82
2196 6489 2.891191 TTGTCGGGCCTTTCCTAATT 57.109 45.000 0.84 0.00 34.39 1.40
2197 6490 2.891191 TTTGTCGGGCCTTTCCTAAT 57.109 45.000 0.84 0.00 34.39 1.73
2198 6491 2.891191 ATTTGTCGGGCCTTTCCTAA 57.109 45.000 0.84 0.00 34.39 2.69
2199 6492 2.891191 AATTTGTCGGGCCTTTCCTA 57.109 45.000 0.84 0.00 34.39 2.94
2200 6493 2.723273 CTAATTTGTCGGGCCTTTCCT 58.277 47.619 0.84 0.00 34.39 3.36
2201 6494 1.134367 GCTAATTTGTCGGGCCTTTCC 59.866 52.381 0.84 0.00 0.00 3.13
2202 6495 1.816224 TGCTAATTTGTCGGGCCTTTC 59.184 47.619 0.84 0.00 0.00 2.62
2203 6496 1.917872 TGCTAATTTGTCGGGCCTTT 58.082 45.000 0.84 0.00 0.00 3.11
2204 6497 1.917872 TTGCTAATTTGTCGGGCCTT 58.082 45.000 0.84 0.00 0.00 4.35
2205 6498 1.917872 TTTGCTAATTTGTCGGGCCT 58.082 45.000 0.84 0.00 0.00 5.19
2206 6499 2.959507 ATTTGCTAATTTGTCGGGCC 57.040 45.000 0.00 0.00 0.00 5.80
2207 6500 4.803613 CCTTAATTTGCTAATTTGTCGGGC 59.196 41.667 11.32 0.00 35.61 6.13
2208 6501 5.126384 TCCCTTAATTTGCTAATTTGTCGGG 59.874 40.000 11.32 14.21 35.61 5.14
2209 6502 6.094881 TCTCCCTTAATTTGCTAATTTGTCGG 59.905 38.462 11.32 6.84 35.61 4.79
2210 6503 6.967199 GTCTCCCTTAATTTGCTAATTTGTCG 59.033 38.462 11.32 0.00 35.61 4.35
2211 6504 6.967199 CGTCTCCCTTAATTTGCTAATTTGTC 59.033 38.462 11.32 0.00 35.61 3.18
2212 6505 6.657541 TCGTCTCCCTTAATTTGCTAATTTGT 59.342 34.615 11.32 0.00 35.61 2.83
2213 6506 6.967199 GTCGTCTCCCTTAATTTGCTAATTTG 59.033 38.462 11.32 5.61 35.61 2.32
2214 6507 6.183360 CGTCGTCTCCCTTAATTTGCTAATTT 60.183 38.462 11.32 0.00 35.61 1.82
2215 6508 5.293569 CGTCGTCTCCCTTAATTTGCTAATT 59.706 40.000 10.87 10.87 37.68 1.40
2216 6509 4.809426 CGTCGTCTCCCTTAATTTGCTAAT 59.191 41.667 0.00 0.00 0.00 1.73
2217 6510 4.178540 CGTCGTCTCCCTTAATTTGCTAA 58.821 43.478 0.00 0.00 0.00 3.09
2218 6511 3.429822 CCGTCGTCTCCCTTAATTTGCTA 60.430 47.826 0.00 0.00 0.00 3.49
2219 6512 2.618053 CGTCGTCTCCCTTAATTTGCT 58.382 47.619 0.00 0.00 0.00 3.91
2220 6513 1.664151 CCGTCGTCTCCCTTAATTTGC 59.336 52.381 0.00 0.00 0.00 3.68
2221 6514 1.664151 GCCGTCGTCTCCCTTAATTTG 59.336 52.381 0.00 0.00 0.00 2.32
2222 6515 1.738030 CGCCGTCGTCTCCCTTAATTT 60.738 52.381 0.00 0.00 0.00 1.82
2223 6516 0.179119 CGCCGTCGTCTCCCTTAATT 60.179 55.000 0.00 0.00 0.00 1.40
2224 6517 1.436336 CGCCGTCGTCTCCCTTAAT 59.564 57.895 0.00 0.00 0.00 1.40
2225 6518 2.879907 CGCCGTCGTCTCCCTTAA 59.120 61.111 0.00 0.00 0.00 1.85
2235 6528 0.302288 TTTGTGAGAAAACGCCGTCG 59.698 50.000 0.00 0.00 42.43 5.12
2236 6529 2.032377 TGATTTGTGAGAAAACGCCGTC 60.032 45.455 0.00 0.00 0.00 4.79
2237 6530 1.944024 TGATTTGTGAGAAAACGCCGT 59.056 42.857 0.00 0.00 0.00 5.68
2238 6531 2.679355 TGATTTGTGAGAAAACGCCG 57.321 45.000 0.00 0.00 0.00 6.46
2239 6532 4.376311 GCATTTGATTTGTGAGAAAACGCC 60.376 41.667 0.00 0.00 0.00 5.68
2240 6533 4.208873 TGCATTTGATTTGTGAGAAAACGC 59.791 37.500 0.00 0.00 0.00 4.84
2241 6534 5.886715 TGCATTTGATTTGTGAGAAAACG 57.113 34.783 0.00 0.00 0.00 3.60
2242 6535 8.892887 TTTTTGCATTTGATTTGTGAGAAAAC 57.107 26.923 0.00 0.00 0.00 2.43
2266 6559 9.350951 CCTAATTTATCGGACCTTTCCTAATTT 57.649 33.333 0.00 0.00 40.23 1.82
2267 6560 7.942894 CCCTAATTTATCGGACCTTTCCTAATT 59.057 37.037 0.00 0.00 40.23 1.40
2268 6561 7.294008 TCCCTAATTTATCGGACCTTTCCTAAT 59.706 37.037 0.00 0.00 40.23 1.73
2269 6562 6.616548 TCCCTAATTTATCGGACCTTTCCTAA 59.383 38.462 0.00 0.00 40.23 2.69
2270 6563 6.145336 TCCCTAATTTATCGGACCTTTCCTA 58.855 40.000 0.00 0.00 40.23 2.94
2271 6564 4.973211 TCCCTAATTTATCGGACCTTTCCT 59.027 41.667 0.00 0.00 40.23 3.36
2272 6565 5.300411 TCCCTAATTTATCGGACCTTTCC 57.700 43.478 0.00 0.00 38.77 3.13
2273 6566 5.763698 CCTTCCCTAATTTATCGGACCTTTC 59.236 44.000 0.00 0.00 0.00 2.62
2274 6567 5.193124 ACCTTCCCTAATTTATCGGACCTTT 59.807 40.000 0.00 0.00 0.00 3.11
2275 6568 4.725304 ACCTTCCCTAATTTATCGGACCTT 59.275 41.667 0.00 0.00 0.00 3.50
2276 6569 4.304659 ACCTTCCCTAATTTATCGGACCT 58.695 43.478 0.00 0.00 0.00 3.85
2277 6570 4.701651 ACCTTCCCTAATTTATCGGACC 57.298 45.455 0.00 0.00 0.00 4.46
2278 6571 6.877855 GGATAACCTTCCCTAATTTATCGGAC 59.122 42.308 0.00 0.00 32.27 4.79
2279 6572 6.295462 CGGATAACCTTCCCTAATTTATCGGA 60.295 42.308 0.00 0.00 34.12 4.55
2280 6573 5.873164 CGGATAACCTTCCCTAATTTATCGG 59.127 44.000 0.00 0.00 32.27 4.18
2281 6574 5.350640 GCGGATAACCTTCCCTAATTTATCG 59.649 44.000 0.00 0.00 32.27 2.92
2282 6575 5.646793 GGCGGATAACCTTCCCTAATTTATC 59.353 44.000 0.00 0.00 31.61 1.75
2283 6576 5.073965 TGGCGGATAACCTTCCCTAATTTAT 59.926 40.000 0.00 0.00 31.61 1.40
2284 6577 4.412858 TGGCGGATAACCTTCCCTAATTTA 59.587 41.667 0.00 0.00 31.61 1.40
2285 6578 3.203487 TGGCGGATAACCTTCCCTAATTT 59.797 43.478 0.00 0.00 31.61 1.82
2286 6579 2.781174 TGGCGGATAACCTTCCCTAATT 59.219 45.455 0.00 0.00 31.61 1.40
2287 6580 2.414612 TGGCGGATAACCTTCCCTAAT 58.585 47.619 0.00 0.00 31.61 1.73
2288 6581 1.882308 TGGCGGATAACCTTCCCTAA 58.118 50.000 0.00 0.00 31.61 2.69
2289 6582 1.882308 TTGGCGGATAACCTTCCCTA 58.118 50.000 0.00 0.00 31.61 3.53
2290 6583 0.996583 TTTGGCGGATAACCTTCCCT 59.003 50.000 0.00 0.00 31.61 4.20
2291 6584 1.100510 GTTTGGCGGATAACCTTCCC 58.899 55.000 0.00 0.00 31.61 3.97
2292 6585 2.014857 GAGTTTGGCGGATAACCTTCC 58.985 52.381 0.00 0.00 0.00 3.46
2293 6586 2.987232 AGAGTTTGGCGGATAACCTTC 58.013 47.619 0.00 0.00 0.00 3.46
2294 6587 4.563140 TTAGAGTTTGGCGGATAACCTT 57.437 40.909 0.00 0.00 0.00 3.50
2295 6588 4.563140 TTTAGAGTTTGGCGGATAACCT 57.437 40.909 0.00 0.00 0.00 3.50
2296 6589 5.589050 AGATTTTAGAGTTTGGCGGATAACC 59.411 40.000 0.00 0.00 0.00 2.85
2297 6590 6.093633 ACAGATTTTAGAGTTTGGCGGATAAC 59.906 38.462 0.00 0.00 0.00 1.89
2298 6591 6.177610 ACAGATTTTAGAGTTTGGCGGATAA 58.822 36.000 0.00 0.00 0.00 1.75
2299 6592 5.741011 ACAGATTTTAGAGTTTGGCGGATA 58.259 37.500 0.00 0.00 0.00 2.59
2300 6593 4.589908 ACAGATTTTAGAGTTTGGCGGAT 58.410 39.130 0.00 0.00 0.00 4.18
2301 6594 4.015872 ACAGATTTTAGAGTTTGGCGGA 57.984 40.909 0.00 0.00 0.00 5.54
2302 6595 4.766404 AACAGATTTTAGAGTTTGGCGG 57.234 40.909 0.00 0.00 0.00 6.13
2303 6596 5.154222 GGAAACAGATTTTAGAGTTTGGCG 58.846 41.667 0.00 0.00 34.62 5.69
2304 6597 5.154222 CGGAAACAGATTTTAGAGTTTGGC 58.846 41.667 0.00 0.00 34.62 4.52
2305 6598 6.017440 TGACGGAAACAGATTTTAGAGTTTGG 60.017 38.462 0.00 0.00 34.62 3.28
2306 6599 6.954944 TGACGGAAACAGATTTTAGAGTTTG 58.045 36.000 0.00 0.00 34.62 2.93
2307 6600 7.584987 CATGACGGAAACAGATTTTAGAGTTT 58.415 34.615 0.00 0.00 36.94 2.66
2308 6601 7.133891 CATGACGGAAACAGATTTTAGAGTT 57.866 36.000 0.00 0.00 0.00 3.01
2309 6602 6.727824 CATGACGGAAACAGATTTTAGAGT 57.272 37.500 0.00 0.00 0.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.