Multiple sequence alignment - TraesCS2A01G447700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G447700 chr2A 100.000 8314 0 0 1 8314 696847733 696856046 0.000000e+00 15354.0
1 TraesCS2A01G447700 chr2A 90.045 673 49 14 131 797 738905301 738904641 0.000000e+00 856.0
2 TraesCS2A01G447700 chr2A 94.512 164 7 1 2984 3145 70985747 70985584 1.390000e-62 252.0
3 TraesCS2A01G447700 chr2A 90.789 152 10 1 1 148 101797707 101797858 5.090000e-47 200.0
4 TraesCS2A01G447700 chr2B 94.382 2563 105 17 4805 7350 664130589 664133129 0.000000e+00 3899.0
5 TraesCS2A01G447700 chr2B 93.712 1654 85 12 3141 4787 664128976 664130617 0.000000e+00 2460.0
6 TraesCS2A01G447700 chr2B 94.974 1333 56 7 1660 2986 664127653 664128980 0.000000e+00 2080.0
7 TraesCS2A01G447700 chr2B 89.043 940 62 14 7383 8311 664133128 664134037 0.000000e+00 1127.0
8 TraesCS2A01G447700 chr2B 90.169 651 39 9 1030 1661 664126964 664127608 0.000000e+00 824.0
9 TraesCS2A01G447700 chr2B 90.260 154 11 2 884 1033 663924240 663924393 1.830000e-46 198.0
10 TraesCS2A01G447700 chr2D 94.861 1654 69 12 3141 4786 556927504 556929149 0.000000e+00 2569.0
11 TraesCS2A01G447700 chr2D 93.395 1075 53 7 6289 7350 556930690 556931759 0.000000e+00 1576.0
12 TraesCS2A01G447700 chr2D 94.622 781 35 3 4805 5585 556929122 556929895 0.000000e+00 1203.0
13 TraesCS2A01G447700 chr2D 88.590 929 57 15 7383 8310 556931758 556932638 0.000000e+00 1083.0
14 TraesCS2A01G447700 chr2D 89.039 812 33 16 884 1661 556925143 556925932 0.000000e+00 955.0
15 TraesCS2A01G447700 chr2D 87.021 678 70 14 5622 6292 556929904 556930570 0.000000e+00 749.0
16 TraesCS2A01G447700 chr2D 94.273 454 22 2 1660 2109 556925977 556926430 0.000000e+00 691.0
17 TraesCS2A01G447700 chr2D 94.432 431 18 1 2109 2539 556926514 556926938 0.000000e+00 658.0
18 TraesCS2A01G447700 chr2D 97.166 247 7 0 2534 2780 556927092 556927338 1.290000e-112 418.0
19 TraesCS2A01G447700 chr2D 91.713 181 10 4 2981 3159 316121710 316121887 6.450000e-61 246.0
20 TraesCS2A01G447700 chr2D 92.982 171 9 3 2818 2986 556927339 556927508 6.450000e-61 246.0
21 TraesCS2A01G447700 chr2D 85.000 120 4 6 959 1068 556714571 556714686 8.820000e-20 110.0
22 TraesCS2A01G447700 chr2D 97.059 34 1 0 7343 7376 650190928 650190895 3.240000e-04 58.4
23 TraesCS2A01G447700 chr7D 93.897 1655 69 18 3141 4787 606962974 606964604 0.000000e+00 2468.0
24 TraesCS2A01G447700 chr7D 89.267 1146 84 19 1850 2986 606961863 606962978 0.000000e+00 1399.0
25 TraesCS2A01G447700 chr7D 90.358 923 66 14 6289 7196 606966162 606967076 0.000000e+00 1190.0
26 TraesCS2A01G447700 chr7D 94.271 768 36 4 4805 5571 606964575 606965335 0.000000e+00 1168.0
27 TraesCS2A01G447700 chr7D 89.717 671 58 10 131 797 595646816 595647479 0.000000e+00 846.0
28 TraesCS2A01G447700 chr7D 89.104 670 62 9 131 797 579767511 579768172 0.000000e+00 822.0
29 TraesCS2A01G447700 chr7D 87.677 706 66 14 5593 6292 606965327 606966017 0.000000e+00 802.0
30 TraesCS2A01G447700 chr7D 88.117 446 26 13 1019 1463 606961306 606961725 9.630000e-139 505.0
31 TraesCS2A01G447700 chr7D 89.474 152 9 3 1 148 125841061 125840913 1.430000e-42 185.0
32 TraesCS2A01G447700 chr7B 93.414 1655 83 19 3144 4787 692837623 692835984 0.000000e+00 2429.0
33 TraesCS2A01G447700 chr7B 91.575 914 60 9 2082 2986 692838527 692837622 0.000000e+00 1245.0
34 TraesCS2A01G447700 chr7B 88.878 1007 67 14 6289 7281 692834429 692833454 0.000000e+00 1197.0
35 TraesCS2A01G447700 chr7B 93.176 762 39 7 4811 5571 692836007 692835258 0.000000e+00 1107.0
36 TraesCS2A01G447700 chr7B 87.129 707 71 13 5593 6292 692835266 692834573 0.000000e+00 784.0
37 TraesCS2A01G447700 chr7B 90.115 435 24 6 1032 1465 692838975 692838559 1.580000e-151 547.0
38 TraesCS2A01G447700 chr7B 100.000 28 0 0 7349 7376 244745732 244745705 1.500000e-02 52.8
39 TraesCS2A01G447700 chr3A 91.343 670 47 9 131 797 725919694 725919033 0.000000e+00 905.0
40 TraesCS2A01G447700 chr3A 89.865 148 12 2 1 148 740061940 740061796 3.960000e-43 187.0
41 TraesCS2A01G447700 chr3A 89.404 151 9 4 1 147 585061833 585061980 5.130000e-42 183.0
42 TraesCS2A01G447700 chr3A 100.000 30 0 0 7347 7376 673611611 673611582 1.000000e-03 56.5
43 TraesCS2A01G447700 chr6D 90.597 670 49 9 131 797 405819822 405820480 0.000000e+00 876.0
44 TraesCS2A01G447700 chr7A 90.149 670 48 12 131 796 462990136 462990791 0.000000e+00 856.0
45 TraesCS2A01G447700 chr7A 89.865 148 11 3 1 148 491992267 491992124 3.960000e-43 187.0
46 TraesCS2A01G447700 chr7A 100.000 28 0 0 7349 7376 690536117 690536090 1.500000e-02 52.8
47 TraesCS2A01G447700 chr5A 89.805 667 55 12 131 795 323730915 323731570 0.000000e+00 843.0
48 TraesCS2A01G447700 chr5A 88.922 668 63 9 131 795 31020729 31021388 0.000000e+00 813.0
49 TraesCS2A01G447700 chr5A 93.976 166 8 1 2985 3148 322584011 322584176 4.980000e-62 250.0
50 TraesCS2A01G447700 chrUn 89.466 674 55 13 132 798 31235505 31236169 0.000000e+00 837.0
51 TraesCS2A01G447700 chrUn 94.444 162 8 1 2985 3145 178663684 178663523 1.790000e-61 248.0
52 TraesCS2A01G447700 chrUn 94.444 162 8 1 2985 3145 178723571 178723410 1.790000e-61 248.0
53 TraesCS2A01G447700 chr5D 83.816 828 74 19 1 797 25282430 25283228 0.000000e+00 732.0
54 TraesCS2A01G447700 chr4D 87.029 663 56 17 1883 2536 504510716 504511357 0.000000e+00 721.0
55 TraesCS2A01G447700 chr1B 93.567 171 8 3 2984 3153 314565538 314565706 1.390000e-62 252.0
56 TraesCS2A01G447700 chr4B 94.479 163 7 1 2985 3145 178081102 178081264 4.980000e-62 250.0
57 TraesCS2A01G447700 chr6A 91.477 176 11 3 2972 3145 603659933 603660106 1.080000e-58 239.0
58 TraesCS2A01G447700 chr3D 91.525 177 10 4 2975 3149 612268441 612268614 1.080000e-58 239.0
59 TraesCS2A01G447700 chr4A 89.865 148 10 4 1 148 29182229 29182087 1.430000e-42 185.0
60 TraesCS2A01G447700 chr1A 89.796 147 11 3 1 147 557944475 557944617 1.430000e-42 185.0
61 TraesCS2A01G447700 chr1A 89.189 148 14 1 1 148 494812757 494812612 5.130000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G447700 chr2A 696847733 696856046 8313 False 15354.000000 15354 100.000000 1 8314 1 chr2A.!!$F2 8313
1 TraesCS2A01G447700 chr2A 738904641 738905301 660 True 856.000000 856 90.045000 131 797 1 chr2A.!!$R2 666
2 TraesCS2A01G447700 chr2B 664126964 664134037 7073 False 2078.000000 3899 92.456000 1030 8311 5 chr2B.!!$F2 7281
3 TraesCS2A01G447700 chr2D 556925143 556932638 7495 False 1014.800000 2569 92.638100 884 8310 10 chr2D.!!$F3 7426
4 TraesCS2A01G447700 chr7D 606961306 606967076 5770 False 1255.333333 2468 90.597833 1019 7196 6 chr7D.!!$F3 6177
5 TraesCS2A01G447700 chr7D 595646816 595647479 663 False 846.000000 846 89.717000 131 797 1 chr7D.!!$F2 666
6 TraesCS2A01G447700 chr7D 579767511 579768172 661 False 822.000000 822 89.104000 131 797 1 chr7D.!!$F1 666
7 TraesCS2A01G447700 chr7B 692833454 692838975 5521 True 1218.166667 2429 90.714500 1032 7281 6 chr7B.!!$R2 6249
8 TraesCS2A01G447700 chr3A 725919033 725919694 661 True 905.000000 905 91.343000 131 797 1 chr3A.!!$R2 666
9 TraesCS2A01G447700 chr6D 405819822 405820480 658 False 876.000000 876 90.597000 131 797 1 chr6D.!!$F1 666
10 TraesCS2A01G447700 chr7A 462990136 462990791 655 False 856.000000 856 90.149000 131 796 1 chr7A.!!$F1 665
11 TraesCS2A01G447700 chr5A 323730915 323731570 655 False 843.000000 843 89.805000 131 795 1 chr5A.!!$F3 664
12 TraesCS2A01G447700 chr5A 31020729 31021388 659 False 813.000000 813 88.922000 131 795 1 chr5A.!!$F1 664
13 TraesCS2A01G447700 chrUn 31235505 31236169 664 False 837.000000 837 89.466000 132 798 1 chrUn.!!$F1 666
14 TraesCS2A01G447700 chr5D 25282430 25283228 798 False 732.000000 732 83.816000 1 797 1 chr5D.!!$F1 796
15 TraesCS2A01G447700 chr4D 504510716 504511357 641 False 721.000000 721 87.029000 1883 2536 1 chr4D.!!$F1 653

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
889 945 0.171455 GCCTACACTGAGGACGTGAG 59.829 60.000 0.00 0.00 39.15 3.51 F
897 953 0.247460 TGAGGACGTGAGCCAGAATG 59.753 55.000 0.00 0.00 0.00 2.67 F
1763 1929 0.109342 AGGAAACAGCAGTGGACCAG 59.891 55.000 0.00 0.00 0.00 4.00 F
1818 1984 1.065199 TGGTAGCTTGCTCCAGGAATG 60.065 52.381 0.00 0.00 0.00 2.67 F
2958 3383 0.696485 GGGGGATGGGGCTAGTTACA 60.696 60.000 0.00 0.00 0.00 2.41 F
2999 3424 1.701422 AGACTACTCCCTCCCTTCCT 58.299 55.000 0.00 0.00 0.00 3.36 F
4571 5017 0.315568 GGCACTCGAGACTGTCTTGT 59.684 55.000 21.68 13.49 0.00 3.16 F
6036 6491 0.114168 ACAGGTTTGGGCATTGGCTA 59.886 50.000 10.31 0.35 40.87 3.93 F
7089 7711 1.000385 TCCAGCAAAACAAGCCAATCG 60.000 47.619 0.00 0.00 0.00 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1763 1929 0.249657 CTCGGGTGAAGAGCATAGGC 60.250 60.000 0.00 0.00 41.61 3.93 R
2697 3120 1.486310 AGCCCGTCTTCTGATAATGCA 59.514 47.619 0.00 0.00 0.00 3.96 R
2750 3173 2.756760 GCCAGATTTCAATCCTTCTGCA 59.243 45.455 0.00 0.00 35.38 4.41 R
3606 4032 2.877154 AGCCCCTTCTAGATTCCTCA 57.123 50.000 0.00 0.00 0.00 3.86 R
3819 4245 0.678048 CCTGCTCCAAGTTAGTGGCC 60.678 60.000 0.00 0.00 38.68 5.36 R
4970 5420 0.975040 AACCACTGCAAACAAGGCCA 60.975 50.000 5.01 0.00 0.00 5.36 R
6210 6669 1.067250 CGGTGTTGTTTGCCCAAGG 59.933 57.895 0.00 0.00 0.00 3.61 R
7177 7812 0.601057 GGCTACAAAATTGGTGGCGT 59.399 50.000 2.76 0.00 42.86 5.68 R
8207 8851 0.396435 TCCTGTGGGTCATGTCACAC 59.604 55.000 17.12 17.12 41.55 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 47 1.214367 TCGCAGAAGTCACGGTTTTC 58.786 50.000 0.00 0.00 0.00 2.29
43 50 1.531578 GCAGAAGTCACGGTTTTCCTC 59.468 52.381 0.00 0.00 37.95 3.71
82 89 1.816835 TGCTTTATCGAGAGTCACGGT 59.183 47.619 10.12 5.50 0.00 4.83
87 94 0.954449 ATCGAGAGTCACGGTCGTGT 60.954 55.000 20.63 5.00 45.55 4.49
92 99 1.001597 AGAGTCACGGTCGTGTCTTTC 60.002 52.381 20.02 14.13 42.61 2.62
178 185 4.116961 CTCGGAAAGGGAAAAACAAAACC 58.883 43.478 0.00 0.00 0.00 3.27
321 338 7.590279 TGTTTTTCTTTTCTTTCACGAGAGTT 58.410 30.769 0.00 0.00 46.40 3.01
371 388 1.442184 GCTTTCGCGAGAGTCACGA 60.442 57.895 25.34 6.50 43.69 4.35
388 405 1.336517 ACGATCGTGCCTCTCGAAAAA 60.337 47.619 22.06 0.00 40.61 1.94
389 406 1.927174 CGATCGTGCCTCTCGAAAAAT 59.073 47.619 7.03 0.00 40.61 1.82
446 491 1.192534 GAGAGTCACGGTTTTGCTTCG 59.807 52.381 0.00 0.00 0.00 3.79
638 691 5.105756 GGTGAAAATGGTTCGAGATTTGGAT 60.106 40.000 0.00 0.00 0.00 3.41
659 714 6.601613 TGGATGCACGGTTTAAGAGATAAAAT 59.398 34.615 0.00 0.00 35.33 1.82
798 854 8.302515 AGTACTCCTTAATTAGTGATTTCGGA 57.697 34.615 0.00 0.00 0.00 4.55
799 855 8.755977 AGTACTCCTTAATTAGTGATTTCGGAA 58.244 33.333 0.00 0.00 29.77 4.30
800 856 9.374838 GTACTCCTTAATTAGTGATTTCGGAAA 57.625 33.333 5.52 5.52 29.77 3.13
801 857 8.857694 ACTCCTTAATTAGTGATTTCGGAAAA 57.142 30.769 7.33 0.00 29.77 2.29
802 858 9.292195 ACTCCTTAATTAGTGATTTCGGAAAAA 57.708 29.630 7.33 0.00 29.77 1.94
809 865 8.970691 ATTAGTGATTTCGGAAAAATCAACAG 57.029 30.769 13.17 0.00 45.06 3.16
810 866 5.222631 AGTGATTTCGGAAAAATCAACAGC 58.777 37.500 13.17 3.67 45.06 4.40
811 867 4.981674 GTGATTTCGGAAAAATCAACAGCA 59.018 37.500 13.17 0.00 45.06 4.41
812 868 5.461737 GTGATTTCGGAAAAATCAACAGCAA 59.538 36.000 13.17 0.00 45.06 3.91
813 869 6.019156 GTGATTTCGGAAAAATCAACAGCAAA 60.019 34.615 13.17 0.00 45.06 3.68
814 870 6.536582 TGATTTCGGAAAAATCAACAGCAAAA 59.463 30.769 7.33 0.00 41.92 2.44
815 871 6.727824 TTTCGGAAAAATCAACAGCAAAAA 57.272 29.167 0.00 0.00 0.00 1.94
843 899 8.443937 AGAAATCCGAGAAACTTCTAAAAATCG 58.556 33.333 0.00 0.00 37.73 3.34
844 900 6.663944 ATCCGAGAAACTTCTAAAAATCGG 57.336 37.500 4.00 4.00 38.08 4.18
845 901 5.544650 TCCGAGAAACTTCTAAAAATCGGT 58.455 37.500 9.79 0.00 37.99 4.69
846 902 6.690530 TCCGAGAAACTTCTAAAAATCGGTA 58.309 36.000 9.79 0.00 37.99 4.02
847 903 6.587608 TCCGAGAAACTTCTAAAAATCGGTAC 59.412 38.462 9.79 0.00 37.99 3.34
848 904 6.589139 CCGAGAAACTTCTAAAAATCGGTACT 59.411 38.462 0.00 0.00 37.73 2.73
849 905 7.411588 CCGAGAAACTTCTAAAAATCGGTACTG 60.412 40.741 0.00 0.00 37.73 2.74
850 906 7.411588 CGAGAAACTTCTAAAAATCGGTACTGG 60.412 40.741 0.85 0.00 37.73 4.00
851 907 7.447594 AGAAACTTCTAAAAATCGGTACTGGA 58.552 34.615 0.85 0.00 35.34 3.86
852 908 7.935210 AGAAACTTCTAAAAATCGGTACTGGAA 59.065 33.333 0.85 0.00 35.34 3.53
853 909 8.454570 AAACTTCTAAAAATCGGTACTGGAAA 57.545 30.769 0.85 0.00 0.00 3.13
854 910 8.454570 AACTTCTAAAAATCGGTACTGGAAAA 57.545 30.769 0.85 0.00 0.00 2.29
855 911 8.631480 ACTTCTAAAAATCGGTACTGGAAAAT 57.369 30.769 0.85 0.00 0.00 1.82
856 912 8.727910 ACTTCTAAAAATCGGTACTGGAAAATC 58.272 33.333 0.85 0.00 0.00 2.17
857 913 7.298507 TCTAAAAATCGGTACTGGAAAATCG 57.701 36.000 0.85 0.00 0.00 3.34
858 914 4.351131 AAAATCGGTACTGGAAAATCGC 57.649 40.909 0.85 0.00 0.00 4.58
859 915 1.567504 ATCGGTACTGGAAAATCGCG 58.432 50.000 0.00 0.00 0.00 5.87
860 916 0.527113 TCGGTACTGGAAAATCGCGA 59.473 50.000 13.09 13.09 0.00 5.87
861 917 1.067706 TCGGTACTGGAAAATCGCGAA 60.068 47.619 15.24 0.00 0.00 4.70
862 918 1.727880 CGGTACTGGAAAATCGCGAAA 59.272 47.619 15.24 0.00 0.00 3.46
863 919 2.350498 CGGTACTGGAAAATCGCGAAAT 59.650 45.455 15.24 1.44 0.00 2.17
864 920 3.680789 GGTACTGGAAAATCGCGAAATG 58.319 45.455 15.24 1.91 0.00 2.32
865 921 2.919666 ACTGGAAAATCGCGAAATGG 57.080 45.000 15.24 2.51 0.00 3.16
866 922 1.472480 ACTGGAAAATCGCGAAATGGG 59.528 47.619 15.24 3.07 0.00 4.00
867 923 0.172352 TGGAAAATCGCGAAATGGGC 59.828 50.000 15.24 0.23 0.00 5.36
868 924 0.527600 GGAAAATCGCGAAATGGGCC 60.528 55.000 15.24 6.62 0.00 5.80
869 925 0.865639 GAAAATCGCGAAATGGGCCG 60.866 55.000 15.24 0.00 0.00 6.13
870 926 2.278182 AAAATCGCGAAATGGGCCGG 62.278 55.000 15.24 0.00 0.00 6.13
874 930 4.868116 GCGAAATGGGCCGGCCTA 62.868 66.667 42.70 39.29 36.10 3.93
875 931 2.900337 CGAAATGGGCCGGCCTAC 60.900 66.667 42.70 28.63 36.10 3.18
876 932 2.274104 GAAATGGGCCGGCCTACA 59.726 61.111 42.70 33.22 36.10 2.74
877 933 2.044352 AAATGGGCCGGCCTACAC 60.044 61.111 42.70 27.49 36.10 2.90
878 934 2.552231 GAAATGGGCCGGCCTACACT 62.552 60.000 42.70 25.58 36.10 3.55
879 935 2.837031 AAATGGGCCGGCCTACACTG 62.837 60.000 42.70 0.00 36.10 3.66
881 937 4.162690 GGGCCGGCCTACACTGAG 62.163 72.222 42.70 0.00 36.10 3.35
882 938 4.162690 GGCCGGCCTACACTGAGG 62.163 72.222 38.76 0.00 39.88 3.86
883 939 3.075005 GCCGGCCTACACTGAGGA 61.075 66.667 18.11 0.00 39.15 3.71
884 940 2.893398 CCGGCCTACACTGAGGAC 59.107 66.667 0.00 0.00 41.86 3.85
886 942 3.696084 GGCCTACACTGAGGACGT 58.304 61.111 0.00 0.00 39.15 4.34
887 943 1.215647 GGCCTACACTGAGGACGTG 59.784 63.158 0.00 0.00 39.15 4.49
888 944 1.248785 GGCCTACACTGAGGACGTGA 61.249 60.000 0.00 0.00 39.15 4.35
889 945 0.171455 GCCTACACTGAGGACGTGAG 59.829 60.000 0.00 0.00 39.15 3.51
890 946 0.171455 CCTACACTGAGGACGTGAGC 59.829 60.000 0.00 0.00 39.15 4.26
891 947 0.171455 CTACACTGAGGACGTGAGCC 59.829 60.000 0.00 0.00 36.29 4.70
892 948 0.538746 TACACTGAGGACGTGAGCCA 60.539 55.000 0.00 0.00 36.29 4.75
893 949 1.080230 CACTGAGGACGTGAGCCAG 60.080 63.158 0.00 0.00 34.35 4.85
894 950 1.228583 ACTGAGGACGTGAGCCAGA 60.229 57.895 0.00 0.00 0.00 3.86
897 953 0.247460 TGAGGACGTGAGCCAGAATG 59.753 55.000 0.00 0.00 0.00 2.67
905 961 2.666619 CGTGAGCCAGAATGTTTTGCTC 60.667 50.000 0.00 0.00 46.60 4.26
990 1053 4.057428 GTGTCGGAGAGTGCGCCT 62.057 66.667 4.18 0.32 36.95 5.52
991 1054 3.303135 TGTCGGAGAGTGCGCCTT 61.303 61.111 4.18 0.00 36.95 4.35
992 1055 1.974875 TGTCGGAGAGTGCGCCTTA 60.975 57.895 4.18 0.00 36.95 2.69
1005 1070 2.923619 GCCTTAGGCTTCTCTCCCT 58.076 57.895 17.16 0.00 46.69 4.20
1007 1072 1.691163 GCCTTAGGCTTCTCTCCCTCT 60.691 57.143 17.16 0.00 46.69 3.69
1009 1074 1.953686 CTTAGGCTTCTCTCCCTCTCG 59.046 57.143 0.00 0.00 32.65 4.04
1010 1075 0.466555 TAGGCTTCTCTCCCTCTCGC 60.467 60.000 0.00 0.00 32.65 5.03
1011 1076 2.791868 GGCTTCTCTCCCTCTCGCC 61.792 68.421 0.00 0.00 0.00 5.54
1131 1207 2.267006 CACGCCATGGCTCTGTCT 59.733 61.111 33.07 6.62 39.32 3.41
1182 1258 0.809241 GCTCGCTGCAGCAGTTCTAT 60.809 55.000 36.03 0.00 42.21 1.98
1237 1313 4.214327 GCGAAGGCGAGGGAGAGG 62.214 72.222 0.00 0.00 40.82 3.69
1238 1314 3.532155 CGAAGGCGAGGGAGAGGG 61.532 72.222 0.00 0.00 40.82 4.30
1508 1598 2.328099 GGCGCTTAACTGTGCTGCT 61.328 57.895 7.64 0.00 42.46 4.24
1523 1625 1.135460 GCTGCTTCCTGTCTGAAATGC 60.135 52.381 0.00 0.00 0.00 3.56
1536 1638 3.811497 TCTGAAATGCTGCATCCTAATCG 59.189 43.478 16.55 1.75 0.00 3.34
1540 1642 5.007626 TGAAATGCTGCATCCTAATCGTAAC 59.992 40.000 16.55 0.00 0.00 2.50
1619 1738 2.407090 GGTGCTCAGGTGCAATTTTTC 58.593 47.619 0.00 0.00 45.12 2.29
1635 1754 1.976478 TTTCGCGCATGTGGAATCGG 61.976 55.000 8.75 0.00 0.00 4.18
1644 1763 0.463654 TGTGGAATCGGGCATAGTGC 60.464 55.000 0.00 0.00 44.08 4.40
1686 1851 3.461085 AGGGTGGTGAATGAATAGATGCT 59.539 43.478 0.00 0.00 0.00 3.79
1743 1909 5.594317 AGATACTAAAGCGCCATGGAAAATT 59.406 36.000 18.40 7.21 0.00 1.82
1763 1929 0.109342 AGGAAACAGCAGTGGACCAG 59.891 55.000 0.00 0.00 0.00 4.00
1794 1960 4.405680 TCTTCACCCGAGATATTCACACAT 59.594 41.667 0.00 0.00 0.00 3.21
1818 1984 1.065199 TGGTAGCTTGCTCCAGGAATG 60.065 52.381 0.00 0.00 0.00 2.67
1934 2104 2.962421 GCATAAGCTAGACTCAGGGAGT 59.038 50.000 0.00 0.00 40.96 3.85
2055 2225 1.536072 GCATGAATGGCTGTGCATCAG 60.536 52.381 0.00 10.75 46.12 2.90
2208 2464 4.858850 ACATCCAAGGTATGCTCATTTGA 58.141 39.130 0.00 0.00 0.00 2.69
2215 2471 6.183360 CCAAGGTATGCTCATTTGATTTTTGC 60.183 38.462 0.00 0.00 0.00 3.68
2221 2477 9.090692 GTATGCTCATTTGATTTTTGCTATGTT 57.909 29.630 0.00 0.00 0.00 2.71
2470 2734 8.822652 AACAGGATCAATTGAAATCAAACTTC 57.177 30.769 13.09 1.81 39.55 3.01
2697 3120 6.307800 CACATTTTTCAACAGTGACTTCGTTT 59.692 34.615 0.00 0.00 31.90 3.60
2750 3173 2.711547 GTGCAGGGAGGGATAAGGTATT 59.288 50.000 0.00 0.00 0.00 1.89
2850 3273 8.944029 GCTTATACTTTGATGATGCATGAGTAT 58.056 33.333 2.46 10.05 31.87 2.12
2958 3383 0.696485 GGGGGATGGGGCTAGTTACA 60.696 60.000 0.00 0.00 0.00 2.41
2965 3390 4.202461 GGATGGGGCTAGTTACAATCATGA 60.202 45.833 0.00 0.00 0.00 3.07
2966 3391 5.515534 GGATGGGGCTAGTTACAATCATGAT 60.516 44.000 1.18 1.18 0.00 2.45
2993 3418 7.657023 TTTATTTGTCTAGACTACTCCCTCC 57.343 40.000 23.01 0.00 0.00 4.30
2994 3419 3.666345 TTGTCTAGACTACTCCCTCCC 57.334 52.381 23.01 0.00 0.00 4.30
2995 3420 2.861261 TGTCTAGACTACTCCCTCCCT 58.139 52.381 23.01 0.00 0.00 4.20
2996 3421 3.199671 TGTCTAGACTACTCCCTCCCTT 58.800 50.000 23.01 0.00 0.00 3.95
2997 3422 3.202595 TGTCTAGACTACTCCCTCCCTTC 59.797 52.174 23.01 0.00 0.00 3.46
2998 3423 2.784682 TCTAGACTACTCCCTCCCTTCC 59.215 54.545 0.00 0.00 0.00 3.46
2999 3424 1.701422 AGACTACTCCCTCCCTTCCT 58.299 55.000 0.00 0.00 0.00 3.36
3000 3425 2.874447 AGACTACTCCCTCCCTTCCTA 58.126 52.381 0.00 0.00 0.00 2.94
3001 3426 3.208173 AGACTACTCCCTCCCTTCCTAA 58.792 50.000 0.00 0.00 0.00 2.69
3002 3427 3.601537 AGACTACTCCCTCCCTTCCTAAA 59.398 47.826 0.00 0.00 0.00 1.85
3003 3428 4.235636 AGACTACTCCCTCCCTTCCTAAAT 59.764 45.833 0.00 0.00 0.00 1.40
3004 3429 5.439059 AGACTACTCCCTCCCTTCCTAAATA 59.561 44.000 0.00 0.00 0.00 1.40
3005 3430 6.106494 AGACTACTCCCTCCCTTCCTAAATAT 59.894 42.308 0.00 0.00 0.00 1.28
3006 3431 7.300005 AGACTACTCCCTCCCTTCCTAAATATA 59.700 40.741 0.00 0.00 0.00 0.86
3007 3432 7.844566 ACTACTCCCTCCCTTCCTAAATATAA 58.155 38.462 0.00 0.00 0.00 0.98
3008 3433 7.956881 ACTACTCCCTCCCTTCCTAAATATAAG 59.043 40.741 0.00 0.00 0.00 1.73
3009 3434 6.704792 ACTCCCTCCCTTCCTAAATATAAGT 58.295 40.000 0.00 0.00 0.00 2.24
3010 3435 6.788456 ACTCCCTCCCTTCCTAAATATAAGTC 59.212 42.308 0.00 0.00 0.00 3.01
3011 3436 6.946526 TCCCTCCCTTCCTAAATATAAGTCT 58.053 40.000 0.00 0.00 0.00 3.24
3012 3437 7.379139 TCCCTCCCTTCCTAAATATAAGTCTT 58.621 38.462 0.00 0.00 0.00 3.01
3013 3438 7.855080 TCCCTCCCTTCCTAAATATAAGTCTTT 59.145 37.037 0.00 0.00 0.00 2.52
3014 3439 9.167387 CCCTCCCTTCCTAAATATAAGTCTTTA 57.833 37.037 0.00 0.00 0.00 1.85
3033 3458 9.487442 AGTCTTTAGAGATTCCAATAAGAGACT 57.513 33.333 0.00 0.00 35.46 3.24
3040 3465 9.647918 AGAGATTCCAATAAGAGACTACATACA 57.352 33.333 0.00 0.00 0.00 2.29
3041 3466 9.906660 GAGATTCCAATAAGAGACTACATACAG 57.093 37.037 0.00 0.00 0.00 2.74
3042 3467 9.647918 AGATTCCAATAAGAGACTACATACAGA 57.352 33.333 0.00 0.00 0.00 3.41
3043 3468 9.906660 GATTCCAATAAGAGACTACATACAGAG 57.093 37.037 0.00 0.00 0.00 3.35
3044 3469 7.278461 TCCAATAAGAGACTACATACAGAGC 57.722 40.000 0.00 0.00 0.00 4.09
3045 3470 6.833933 TCCAATAAGAGACTACATACAGAGCA 59.166 38.462 0.00 0.00 0.00 4.26
3046 3471 7.342026 TCCAATAAGAGACTACATACAGAGCAA 59.658 37.037 0.00 0.00 0.00 3.91
3047 3472 7.981789 CCAATAAGAGACTACATACAGAGCAAA 59.018 37.037 0.00 0.00 0.00 3.68
3048 3473 9.371136 CAATAAGAGACTACATACAGAGCAAAA 57.629 33.333 0.00 0.00 0.00 2.44
3050 3475 7.840342 AAGAGACTACATACAGAGCAAAATG 57.160 36.000 0.00 0.00 0.00 2.32
3051 3476 7.175347 AGAGACTACATACAGAGCAAAATGA 57.825 36.000 0.00 0.00 0.00 2.57
3052 3477 7.264221 AGAGACTACATACAGAGCAAAATGAG 58.736 38.462 0.00 0.00 0.00 2.90
3053 3478 6.940739 AGACTACATACAGAGCAAAATGAGT 58.059 36.000 0.00 0.00 0.00 3.41
3054 3479 6.815641 AGACTACATACAGAGCAAAATGAGTG 59.184 38.462 0.00 0.00 0.00 3.51
3055 3480 6.701340 ACTACATACAGAGCAAAATGAGTGA 58.299 36.000 0.00 0.00 0.00 3.41
3056 3481 7.161404 ACTACATACAGAGCAAAATGAGTGAA 58.839 34.615 0.00 0.00 0.00 3.18
3057 3482 7.826252 ACTACATACAGAGCAAAATGAGTGAAT 59.174 33.333 0.00 0.00 0.00 2.57
3058 3483 7.081526 ACATACAGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
3059 3484 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
3060 3485 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
3061 3486 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
3062 3487 6.233434 ACAGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
3063 3488 6.148480 ACAGAGCAAAATGAGTGAATCTACAC 59.852 38.462 0.00 0.00 40.60 2.90
3107 3532 8.780846 ACATCCGTATGTAGTTTGTATTGAAA 57.219 30.769 0.00 0.00 44.66 2.69
3108 3533 9.391006 ACATCCGTATGTAGTTTGTATTGAAAT 57.609 29.630 0.00 0.00 44.66 2.17
3109 3534 9.864034 CATCCGTATGTAGTTTGTATTGAAATC 57.136 33.333 0.00 0.00 0.00 2.17
3110 3535 9.832445 ATCCGTATGTAGTTTGTATTGAAATCT 57.168 29.630 0.00 0.00 0.00 2.40
3111 3536 9.309516 TCCGTATGTAGTTTGTATTGAAATCTC 57.690 33.333 0.00 0.00 0.00 2.75
3112 3537 9.314321 CCGTATGTAGTTTGTATTGAAATCTCT 57.686 33.333 0.00 0.00 0.00 3.10
3142 3567 9.819267 AAGACTTATATTTAGAAACGGAAGGAG 57.181 33.333 0.00 0.00 0.00 3.69
3143 3568 8.979534 AGACTTATATTTAGAAACGGAAGGAGT 58.020 33.333 0.00 0.00 0.00 3.85
3158 3583 6.097839 ACGGAAGGAGTAGATACTTTTGCATA 59.902 38.462 0.00 0.00 36.50 3.14
3248 3674 6.469782 ACCAACATTTGAGTGAATGAAACT 57.530 33.333 4.76 0.00 38.93 2.66
3474 3900 4.220382 TGCCTGGAAAGGTACATTGATTTG 59.780 41.667 0.00 0.00 0.00 2.32
3523 3949 6.872628 TTCATGTCCATCTAGAATGCATTC 57.127 37.500 28.44 28.44 37.06 2.67
3753 4179 5.236478 CCAGTTGAACCTATATAAACGCCTG 59.764 44.000 0.00 0.00 0.00 4.85
3762 4188 7.834803 ACCTATATAAACGCCTGATAGGTTAC 58.165 38.462 6.14 0.00 46.62 2.50
3819 4245 5.065731 GGAAGAGGAACAATATCTTGCTGTG 59.934 44.000 0.00 0.00 38.10 3.66
3841 4267 1.611673 CCACTAACTTGGAGCAGGTGG 60.612 57.143 0.00 0.00 39.24 4.61
3843 4269 0.678048 CTAACTTGGAGCAGGTGGGC 60.678 60.000 0.00 0.00 0.00 5.36
3879 4305 6.867662 ATTACAGTTCTTGTGGACTTTCTG 57.132 37.500 0.00 0.00 41.10 3.02
3906 4337 4.768968 CCAATTTCTCACACCATTTCCTCT 59.231 41.667 0.00 0.00 0.00 3.69
4004 4436 5.738619 TTGCCTTGATACTTGTGTCTCTA 57.261 39.130 0.00 0.00 0.00 2.43
4164 4596 8.642935 TTTGGATGTAACATTTGGTATCTCAA 57.357 30.769 0.00 0.00 0.00 3.02
4165 4597 8.821686 TTGGATGTAACATTTGGTATCTCAAT 57.178 30.769 0.00 0.00 0.00 2.57
4269 4701 6.830114 TTCTCAAAGAAGTCGAAGAACTTC 57.170 37.500 8.38 8.38 41.49 3.01
4323 4755 4.943705 TCATAACTGTTCCATTTCAGAGCC 59.056 41.667 0.00 0.00 35.84 4.70
4340 4772 5.069648 TCAGAGCCGAGTGATATTCAATTCT 59.930 40.000 0.00 0.00 0.00 2.40
4350 4782 8.362860 AGTGATATTCAATTCTTCAGTGATCG 57.637 34.615 0.00 0.00 0.00 3.69
4363 4795 3.064134 TCAGTGATCGATCGTGACTCTTC 59.936 47.826 20.69 3.16 0.00 2.87
4408 4851 7.670364 TGTCAGTCTTGAGAATTGTTGAGATA 58.330 34.615 0.00 0.00 32.98 1.98
4462 4905 1.338769 CGGGTGGGTGTTCTAAGGAAG 60.339 57.143 0.00 0.00 31.46 3.46
4571 5017 0.315568 GGCACTCGAGACTGTCTTGT 59.684 55.000 21.68 13.49 0.00 3.16
4585 5031 5.056480 ACTGTCTTGTTGATTCGTTCATCA 58.944 37.500 0.00 0.00 33.34 3.07
4587 5033 5.296748 TGTCTTGTTGATTCGTTCATCAGA 58.703 37.500 0.00 0.00 35.88 3.27
4605 5051 7.175797 TCATCAGAACTAGAGAACCTCACTAA 58.824 38.462 0.00 0.00 32.06 2.24
4634 5081 2.031245 TGTGGATGCAAACATGTCGAAC 60.031 45.455 0.00 0.00 36.35 3.95
4699 5149 5.937540 TGAACACTTTCAGTCTTTCTTCACA 59.062 36.000 0.00 0.00 36.79 3.58
4720 5170 6.017934 TCACAGCAGTTTCTTACAAGAATGAC 60.018 38.462 5.29 2.51 43.92 3.06
4745 5195 2.844348 TCCCTTGTCCATTTCCCTCTAC 59.156 50.000 0.00 0.00 0.00 2.59
4748 5198 2.352561 TGTCCATTTCCCTCTACCCA 57.647 50.000 0.00 0.00 0.00 4.51
4780 5230 9.709600 GCTAATGTTCTTCTAAAATAAGTCTGC 57.290 33.333 0.00 0.00 0.00 4.26
4782 5232 8.870075 AATGTTCTTCTAAAATAAGTCTGCCT 57.130 30.769 0.00 0.00 0.00 4.75
4783 5233 8.870075 ATGTTCTTCTAAAATAAGTCTGCCTT 57.130 30.769 0.00 0.00 37.17 4.35
4784 5234 9.959721 ATGTTCTTCTAAAATAAGTCTGCCTTA 57.040 29.630 0.00 0.00 39.90 2.69
4785 5235 9.959721 TGTTCTTCTAAAATAAGTCTGCCTTAT 57.040 29.630 0.00 0.00 46.19 1.73
4970 5420 5.514169 TCTCTGTCTGTCTCACCTAATGAT 58.486 41.667 0.00 0.00 36.48 2.45
4991 5441 0.746659 GCCTTGTTTGCAGTGGTTCT 59.253 50.000 0.00 0.00 0.00 3.01
5015 5465 7.725844 TCTGAGGTGAGATTGAGTATATGCTAA 59.274 37.037 0.00 0.00 0.00 3.09
5041 5491 4.330944 TCACGAAGGCTCTTTTGACTTA 57.669 40.909 0.00 0.00 0.00 2.24
5093 5543 0.242825 TTCTGTAGGACCGAACTGCG 59.757 55.000 2.28 0.00 40.47 5.18
5117 5567 4.137543 GCATATGGAAACTCCCTAACCTG 58.862 47.826 4.56 0.00 35.03 4.00
5174 5624 4.202151 GGCATTTGGTCAGTTGAGTTTTCT 60.202 41.667 0.00 0.00 0.00 2.52
5543 5993 8.565896 TGTTTTATCATCTGTAATGTGAGCTT 57.434 30.769 0.00 0.00 0.00 3.74
5616 6066 3.449746 TGTTGGAAGTCTTTATGGGGG 57.550 47.619 0.00 0.00 0.00 5.40
5648 6101 7.543172 CAGCTAAAACACTATGCATTGAATTGT 59.457 33.333 15.23 6.14 0.00 2.71
5659 6112 3.672867 GCATTGAATTGTTGTTACCGGTG 59.327 43.478 19.93 0.00 0.00 4.94
5715 6169 3.872696 TCAGTGAAACAGAAACTGCTGA 58.127 40.909 0.00 0.00 40.89 4.26
5740 6194 4.783764 TCTGTTTCATTCGAGAGCAGTA 57.216 40.909 0.00 0.00 0.00 2.74
5954 6409 8.918202 TTTCGAATACCATTCTTAGGCAATAT 57.082 30.769 0.00 0.00 0.00 1.28
5955 6410 7.905604 TCGAATACCATTCTTAGGCAATATG 57.094 36.000 0.00 0.00 0.00 1.78
5983 6438 4.420522 TTTTTCCCTTGCTCAATGCTTT 57.579 36.364 0.00 0.00 43.37 3.51
6036 6491 0.114168 ACAGGTTTGGGCATTGGCTA 59.886 50.000 10.31 0.35 40.87 3.93
6092 6547 6.536941 GTGGAACTGATTCTGATCTTAACCTC 59.463 42.308 0.00 0.00 34.98 3.85
6190 6649 3.070018 GGATAAAGCTATGCATGCGAGT 58.930 45.455 14.09 4.18 35.28 4.18
6210 6669 6.345015 GCGAGTTGCTTGTCTTTGTTTAATTC 60.345 38.462 0.00 0.00 41.73 2.17
6272 6734 8.730680 AGAATATAACAACACTGGAAACATGAC 58.269 33.333 0.00 0.00 41.51 3.06
6280 6742 5.063880 ACACTGGAAACATGACCTTTACTC 58.936 41.667 0.00 0.00 41.51 2.59
6284 6746 5.070001 TGGAAACATGACCTTTACTCCTTG 58.930 41.667 0.00 0.00 33.40 3.61
6305 6915 5.036117 TGTAAATGGCTCCTTGGATCTAC 57.964 43.478 0.00 0.00 0.00 2.59
6320 6930 5.458015 TGGATCTACGTGCAATACTTATCG 58.542 41.667 0.00 0.00 0.00 2.92
6329 6939 4.670621 GTGCAATACTTATCGGCATTTTCG 59.329 41.667 0.00 0.00 36.79 3.46
6360 6970 3.847184 AGGAGGAGGAAGTTTTAAGAGGG 59.153 47.826 0.00 0.00 0.00 4.30
6411 7021 9.190858 GATTCTGACTATACAAGAGCAATACAG 57.809 37.037 0.00 0.00 0.00 2.74
6864 7483 2.304180 CGAGGGCCTCATTCCATATTCT 59.696 50.000 31.69 0.00 0.00 2.40
7015 7634 4.392754 CGTCAATGGACAATGTTGAGATCA 59.607 41.667 0.13 0.00 44.54 2.92
7017 7636 5.413833 GTCAATGGACAATGTTGAGATCACT 59.586 40.000 0.00 0.00 43.73 3.41
7089 7711 1.000385 TCCAGCAAAACAAGCCAATCG 60.000 47.619 0.00 0.00 0.00 3.34
7177 7812 1.248486 CACTGACCGGTCTCTCTTCA 58.752 55.000 33.39 12.73 0.00 3.02
7211 7846 0.824109 TAGCCGCTGTTGTATCTGCT 59.176 50.000 2.16 0.00 0.00 4.24
7350 7985 3.935828 GAGTCCACAGCTAAGCTTTTAGG 59.064 47.826 3.20 0.00 36.40 2.69
7351 7986 3.010420 GTCCACAGCTAAGCTTTTAGGG 58.990 50.000 3.20 0.00 36.40 3.53
7352 7987 1.745653 CCACAGCTAAGCTTTTAGGGC 59.254 52.381 3.20 2.19 36.40 5.19
7353 7988 2.436417 CACAGCTAAGCTTTTAGGGCA 58.564 47.619 3.20 0.00 36.40 5.36
7354 7989 3.019564 CACAGCTAAGCTTTTAGGGCAT 58.980 45.455 3.20 0.00 36.40 4.40
7355 7990 3.019564 ACAGCTAAGCTTTTAGGGCATG 58.980 45.455 3.20 5.45 36.40 4.06
7356 7991 3.019564 CAGCTAAGCTTTTAGGGCATGT 58.980 45.455 3.20 0.00 36.40 3.21
7357 7992 4.199310 CAGCTAAGCTTTTAGGGCATGTA 58.801 43.478 3.20 0.00 36.40 2.29
7358 7993 4.035675 CAGCTAAGCTTTTAGGGCATGTAC 59.964 45.833 3.20 0.00 36.40 2.90
7359 7994 3.945285 GCTAAGCTTTTAGGGCATGTACA 59.055 43.478 3.20 0.00 0.00 2.90
7360 7995 4.398044 GCTAAGCTTTTAGGGCATGTACAA 59.602 41.667 3.20 0.00 0.00 2.41
7361 7996 5.067805 GCTAAGCTTTTAGGGCATGTACAAT 59.932 40.000 3.20 0.00 0.00 2.71
7362 7997 4.989279 AGCTTTTAGGGCATGTACAATG 57.011 40.909 0.00 0.12 0.00 2.82
7363 7998 3.701040 AGCTTTTAGGGCATGTACAATGG 59.299 43.478 0.00 0.00 0.00 3.16
7364 7999 3.447229 GCTTTTAGGGCATGTACAATGGT 59.553 43.478 0.00 0.00 0.00 3.55
7365 8000 4.677779 GCTTTTAGGGCATGTACAATGGTG 60.678 45.833 0.00 0.00 0.00 4.17
7366 8001 2.051334 TAGGGCATGTACAATGGTGC 57.949 50.000 10.12 10.12 36.88 5.01
7367 8002 0.332632 AGGGCATGTACAATGGTGCT 59.667 50.000 16.47 0.00 37.70 4.40
7368 8003 1.563879 AGGGCATGTACAATGGTGCTA 59.436 47.619 16.47 0.00 37.70 3.49
7369 8004 2.175499 AGGGCATGTACAATGGTGCTAT 59.825 45.455 16.47 5.35 37.70 2.97
7370 8005 3.394274 AGGGCATGTACAATGGTGCTATA 59.606 43.478 16.47 0.00 37.70 1.31
7371 8006 4.043310 AGGGCATGTACAATGGTGCTATAT 59.957 41.667 16.47 1.27 37.70 0.86
7372 8007 4.766891 GGGCATGTACAATGGTGCTATATT 59.233 41.667 16.47 0.00 37.70 1.28
7373 8008 5.943416 GGGCATGTACAATGGTGCTATATTA 59.057 40.000 16.47 0.00 37.70 0.98
7374 8009 6.094048 GGGCATGTACAATGGTGCTATATTAG 59.906 42.308 16.47 0.00 37.70 1.73
7375 8010 6.094048 GGCATGTACAATGGTGCTATATTAGG 59.906 42.308 16.47 0.00 37.70 2.69
7376 8011 6.094048 GCATGTACAATGGTGCTATATTAGGG 59.906 42.308 11.12 0.00 34.85 3.53
7377 8012 5.556915 TGTACAATGGTGCTATATTAGGGC 58.443 41.667 0.00 0.00 0.00 5.19
7378 8013 4.722526 ACAATGGTGCTATATTAGGGCA 57.277 40.909 0.00 0.00 0.00 5.36
7379 8014 5.261040 ACAATGGTGCTATATTAGGGCAT 57.739 39.130 0.00 0.00 38.27 4.40
7380 8015 5.012239 ACAATGGTGCTATATTAGGGCATG 58.988 41.667 0.00 0.00 38.27 4.06
7381 8016 5.222109 ACAATGGTGCTATATTAGGGCATGA 60.222 40.000 0.00 0.00 38.27 3.07
7382 8017 4.991789 TGGTGCTATATTAGGGCATGAA 57.008 40.909 0.00 0.00 38.27 2.57
7383 8018 4.910195 TGGTGCTATATTAGGGCATGAAG 58.090 43.478 0.00 0.00 38.27 3.02
7387 8022 6.265422 GGTGCTATATTAGGGCATGAAGTTTT 59.735 38.462 0.00 0.00 38.27 2.43
7422 8057 1.071699 GCCATCTTATCCGCTGGGTTA 59.928 52.381 0.00 0.00 33.83 2.85
7441 8076 5.222631 GGTTAGTTTGCCTTGATTGTCTTG 58.777 41.667 0.00 0.00 0.00 3.02
7490 8125 3.043713 TCGCTTGCTCCACTTGCG 61.044 61.111 0.00 0.00 46.71 4.85
7556 8191 1.897802 TCCCGTCCTAGTCACCTTTTC 59.102 52.381 0.00 0.00 0.00 2.29
7584 8219 0.178861 AGTGGGGAGTGAGGTGGAAT 60.179 55.000 0.00 0.00 0.00 3.01
7585 8220 1.080498 AGTGGGGAGTGAGGTGGAATA 59.920 52.381 0.00 0.00 0.00 1.75
7586 8221 1.913419 GTGGGGAGTGAGGTGGAATAA 59.087 52.381 0.00 0.00 0.00 1.40
7587 8222 2.509964 GTGGGGAGTGAGGTGGAATAAT 59.490 50.000 0.00 0.00 0.00 1.28
7588 8223 3.053619 GTGGGGAGTGAGGTGGAATAATT 60.054 47.826 0.00 0.00 0.00 1.40
7590 8225 3.053619 GGGGAGTGAGGTGGAATAATTGT 60.054 47.826 0.00 0.00 0.00 2.71
7591 8226 3.947834 GGGAGTGAGGTGGAATAATTGTG 59.052 47.826 0.00 0.00 0.00 3.33
7592 8227 4.567747 GGGAGTGAGGTGGAATAATTGTGT 60.568 45.833 0.00 0.00 0.00 3.72
7593 8228 4.396166 GGAGTGAGGTGGAATAATTGTGTG 59.604 45.833 0.00 0.00 0.00 3.82
7594 8229 5.241403 AGTGAGGTGGAATAATTGTGTGA 57.759 39.130 0.00 0.00 0.00 3.58
7595 8230 5.003804 AGTGAGGTGGAATAATTGTGTGAC 58.996 41.667 0.00 0.00 0.00 3.67
7663 8298 2.030893 GTGTAACGTAAACCTTTGGGGC 60.031 50.000 0.00 0.00 39.10 5.80
7688 8325 6.955963 CGAAAGCATCTTATGTTAGTTGTCAC 59.044 38.462 0.00 0.00 0.00 3.67
7697 8334 2.614983 TGTTAGTTGTCACCGCCTTTTC 59.385 45.455 0.00 0.00 0.00 2.29
7716 8353 3.307906 TTGTCCCCGGTCACGAGG 61.308 66.667 0.00 0.00 44.60 4.63
7717 8354 3.813606 TTGTCCCCGGTCACGAGGA 62.814 63.158 0.00 0.00 45.32 3.71
7746 8383 0.723459 GTAAAACGGCGGTGCTTTCG 60.723 55.000 13.24 0.00 0.00 3.46
7765 8402 1.301716 GTTCGGCAGCAGGAGTTGA 60.302 57.895 0.00 0.00 0.00 3.18
7777 8414 1.005097 AGGAGTTGATGATGCTGCCAA 59.995 47.619 0.00 0.00 0.00 4.52
7784 8421 4.049546 TGATGATGCTGCCAAAATAAGC 57.950 40.909 0.00 0.00 37.46 3.09
7812 8449 1.872952 TGTGCGAATTTCACAGGACTG 59.127 47.619 9.53 0.00 39.29 3.51
7813 8450 2.143122 GTGCGAATTTCACAGGACTGA 58.857 47.619 6.29 0.00 34.73 3.41
7814 8451 2.096218 GTGCGAATTTCACAGGACTGAC 60.096 50.000 6.29 0.00 34.73 3.51
7815 8452 2.224281 TGCGAATTTCACAGGACTGACT 60.224 45.455 6.29 0.00 0.00 3.41
7867 8507 0.734889 CCGGTGTGATTCAGGAATGC 59.265 55.000 0.00 0.00 0.00 3.56
7875 8515 2.811431 TGATTCAGGAATGCGACGTTTT 59.189 40.909 0.00 0.00 0.00 2.43
7903 8543 1.056660 AGACAACAACCGATGGTCCT 58.943 50.000 0.00 0.00 33.12 3.85
7904 8544 1.002087 AGACAACAACCGATGGTCCTC 59.998 52.381 0.00 0.00 33.12 3.71
7907 8547 1.848886 AACAACCGATGGTCCTCCCC 61.849 60.000 0.00 0.00 33.12 4.81
7908 8548 1.995626 CAACCGATGGTCCTCCCCT 60.996 63.158 0.00 0.00 33.12 4.79
7971 8611 0.168128 GTTCTTCCACCGGCAATTCG 59.832 55.000 0.00 0.00 0.00 3.34
8008 8648 1.893801 GTCTTTCACCGGAGAGAGGAA 59.106 52.381 17.42 2.06 35.18 3.36
8009 8649 2.094442 GTCTTTCACCGGAGAGAGGAAG 60.094 54.545 17.42 11.16 35.18 3.46
8010 8650 0.608640 TTTCACCGGAGAGAGGAAGC 59.391 55.000 9.46 0.00 0.00 3.86
8012 8652 0.541998 TCACCGGAGAGAGGAAGCAA 60.542 55.000 9.46 0.00 0.00 3.91
8109 8753 1.563924 TGTCCATGTTACCCTACGCT 58.436 50.000 0.00 0.00 0.00 5.07
8110 8754 2.737544 TGTCCATGTTACCCTACGCTA 58.262 47.619 0.00 0.00 0.00 4.26
8111 8755 3.098377 TGTCCATGTTACCCTACGCTAA 58.902 45.455 0.00 0.00 0.00 3.09
8112 8756 3.514706 TGTCCATGTTACCCTACGCTAAA 59.485 43.478 0.00 0.00 0.00 1.85
8113 8757 4.020396 TGTCCATGTTACCCTACGCTAAAA 60.020 41.667 0.00 0.00 0.00 1.52
8114 8758 5.121105 GTCCATGTTACCCTACGCTAAAAT 58.879 41.667 0.00 0.00 0.00 1.82
8115 8759 5.007332 GTCCATGTTACCCTACGCTAAAATG 59.993 44.000 0.00 0.00 0.00 2.32
8116 8760 5.104859 TCCATGTTACCCTACGCTAAAATGA 60.105 40.000 0.00 0.00 0.00 2.57
8117 8761 5.587043 CCATGTTACCCTACGCTAAAATGAA 59.413 40.000 0.00 0.00 0.00 2.57
8118 8762 6.457799 CCATGTTACCCTACGCTAAAATGAAC 60.458 42.308 0.00 0.00 0.00 3.18
8119 8763 5.549347 TGTTACCCTACGCTAAAATGAACA 58.451 37.500 0.00 0.00 0.00 3.18
8120 8764 6.174760 TGTTACCCTACGCTAAAATGAACAT 58.825 36.000 0.00 0.00 0.00 2.71
8121 8765 6.092944 TGTTACCCTACGCTAAAATGAACATG 59.907 38.462 0.00 0.00 0.00 3.21
8122 8766 3.377172 ACCCTACGCTAAAATGAACATGC 59.623 43.478 0.00 0.00 0.00 4.06
8158 8802 3.683581 GCACCAAAAGAGATGCGAC 57.316 52.632 0.00 0.00 0.00 5.19
8207 8851 1.011333 ACGAACCAAGAAACACCACG 58.989 50.000 0.00 0.00 0.00 4.94
8217 8861 1.937223 GAAACACCACGTGTGACATGA 59.063 47.619 15.65 0.00 46.79 3.07
8224 8868 0.249868 ACGTGTGACATGACCCACAG 60.250 55.000 12.40 13.42 43.07 3.66
8245 8889 4.596643 CAGGAGATATGGGGTCTCAAATCT 59.403 45.833 5.61 0.00 43.05 2.40
8249 8893 5.934781 AGATATGGGGTCTCAAATCTGAAC 58.065 41.667 0.00 0.00 0.00 3.18
8253 8897 3.138283 TGGGGTCTCAAATCTGAACTTGT 59.862 43.478 3.65 0.00 0.00 3.16
8258 8902 5.444122 GTCTCAAATCTGAACTTGTTTCCG 58.556 41.667 3.65 0.00 32.58 4.30
8280 8924 8.002984 TCCGTTAAAAGGAAAATCTGAACTTT 57.997 30.769 0.00 0.00 34.33 2.66
8281 8925 9.122779 TCCGTTAAAAGGAAAATCTGAACTTTA 57.877 29.630 0.00 0.00 34.33 1.85
8311 8955 3.383761 AGTTAACTACACGAAACCACCG 58.616 45.455 6.26 0.00 0.00 4.94
8312 8956 1.782044 TAACTACACGAAACCACCGC 58.218 50.000 0.00 0.00 0.00 5.68
8313 8957 0.179078 AACTACACGAAACCACCGCA 60.179 50.000 0.00 0.00 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.214367 GAAAACCGTGACTTCTGCGA 58.786 50.000 0.00 0.00 0.00 5.10
23 24 1.531578 GAGGAAAACCGTGACTTCTGC 59.468 52.381 0.00 0.00 0.00 4.26
25 26 1.071857 GGGAGGAAAACCGTGACTTCT 59.928 52.381 0.00 0.00 0.00 2.85
26 27 1.520494 GGGAGGAAAACCGTGACTTC 58.480 55.000 0.00 0.00 0.00 3.01
56 63 2.599082 GACTCTCGATAAAGCACAACCG 59.401 50.000 0.00 0.00 0.00 4.44
69 76 3.888522 AGACACGACCGTGACTCTCGA 62.889 57.143 26.50 0.00 44.94 4.04
127 134 1.864711 CCGTGACTCTCGCAAAAGAAA 59.135 47.619 0.00 0.00 0.00 2.52
155 162 4.382254 GGTTTTGTTTTTCCCTTTCCGAGT 60.382 41.667 0.00 0.00 0.00 4.18
305 321 4.311816 ACCGTAACTCTCGTGAAAGAAA 57.688 40.909 0.00 0.00 0.00 2.52
371 388 2.009774 CCATTTTTCGAGAGGCACGAT 58.990 47.619 0.00 0.00 39.45 3.73
446 491 2.022129 CACAACCGTGCCTCTCGTC 61.022 63.158 0.00 0.00 36.06 4.20
638 691 6.811253 ACATTTTATCTCTTAAACCGTGCA 57.189 33.333 0.00 0.00 29.47 4.57
659 714 7.655236 TTCGTAGATCCGTTTATTCAAAACA 57.345 32.000 2.00 0.00 35.04 2.83
817 873 8.443937 CGATTTTTAGAAGTTTCTCGGATTTCT 58.556 33.333 0.00 0.00 38.70 2.52
818 874 7.692705 CCGATTTTTAGAAGTTTCTCGGATTTC 59.307 37.037 10.64 0.00 38.64 2.17
819 875 7.174426 ACCGATTTTTAGAAGTTTCTCGGATTT 59.826 33.333 18.73 1.49 38.64 2.17
820 876 6.653740 ACCGATTTTTAGAAGTTTCTCGGATT 59.346 34.615 18.73 2.01 38.64 3.01
821 877 6.171213 ACCGATTTTTAGAAGTTTCTCGGAT 58.829 36.000 18.73 6.29 38.64 4.18
822 878 5.544650 ACCGATTTTTAGAAGTTTCTCGGA 58.455 37.500 18.73 0.00 38.64 4.55
823 879 5.857822 ACCGATTTTTAGAAGTTTCTCGG 57.142 39.130 13.24 13.24 40.74 4.63
824 880 7.411588 CCAGTACCGATTTTTAGAAGTTTCTCG 60.412 40.741 0.00 0.00 38.70 4.04
825 881 7.601508 TCCAGTACCGATTTTTAGAAGTTTCTC 59.398 37.037 0.00 0.00 38.70 2.87
826 882 7.447594 TCCAGTACCGATTTTTAGAAGTTTCT 58.552 34.615 0.00 0.00 41.24 2.52
827 883 7.662604 TCCAGTACCGATTTTTAGAAGTTTC 57.337 36.000 0.00 0.00 0.00 2.78
828 884 8.454570 TTTCCAGTACCGATTTTTAGAAGTTT 57.545 30.769 0.00 0.00 0.00 2.66
829 885 8.454570 TTTTCCAGTACCGATTTTTAGAAGTT 57.545 30.769 0.00 0.00 0.00 2.66
830 886 8.631480 ATTTTCCAGTACCGATTTTTAGAAGT 57.369 30.769 0.00 0.00 0.00 3.01
831 887 7.903431 CGATTTTCCAGTACCGATTTTTAGAAG 59.097 37.037 0.00 0.00 0.00 2.85
832 888 7.624764 GCGATTTTCCAGTACCGATTTTTAGAA 60.625 37.037 0.00 0.00 0.00 2.10
833 889 6.183360 GCGATTTTCCAGTACCGATTTTTAGA 60.183 38.462 0.00 0.00 0.00 2.10
834 890 5.963586 GCGATTTTCCAGTACCGATTTTTAG 59.036 40.000 0.00 0.00 0.00 1.85
835 891 5.446206 CGCGATTTTCCAGTACCGATTTTTA 60.446 40.000 0.00 0.00 0.00 1.52
836 892 4.670735 CGCGATTTTCCAGTACCGATTTTT 60.671 41.667 0.00 0.00 0.00 1.94
837 893 3.181514 CGCGATTTTCCAGTACCGATTTT 60.182 43.478 0.00 0.00 0.00 1.82
838 894 2.350498 CGCGATTTTCCAGTACCGATTT 59.650 45.455 0.00 0.00 0.00 2.17
839 895 1.931172 CGCGATTTTCCAGTACCGATT 59.069 47.619 0.00 0.00 0.00 3.34
840 896 1.135527 TCGCGATTTTCCAGTACCGAT 59.864 47.619 3.71 0.00 0.00 4.18
841 897 0.527113 TCGCGATTTTCCAGTACCGA 59.473 50.000 3.71 0.00 0.00 4.69
842 898 1.352114 TTCGCGATTTTCCAGTACCG 58.648 50.000 10.88 0.00 0.00 4.02
843 899 3.486875 CCATTTCGCGATTTTCCAGTACC 60.487 47.826 10.88 0.00 0.00 3.34
844 900 3.486875 CCCATTTCGCGATTTTCCAGTAC 60.487 47.826 10.88 0.00 0.00 2.73
845 901 2.680841 CCCATTTCGCGATTTTCCAGTA 59.319 45.455 10.88 0.00 0.00 2.74
846 902 1.472480 CCCATTTCGCGATTTTCCAGT 59.528 47.619 10.88 0.00 0.00 4.00
847 903 1.798813 GCCCATTTCGCGATTTTCCAG 60.799 52.381 10.88 0.00 0.00 3.86
848 904 0.172352 GCCCATTTCGCGATTTTCCA 59.828 50.000 10.88 0.00 0.00 3.53
849 905 0.527600 GGCCCATTTCGCGATTTTCC 60.528 55.000 10.88 3.13 0.00 3.13
850 906 0.865639 CGGCCCATTTCGCGATTTTC 60.866 55.000 10.88 0.00 0.00 2.29
851 907 1.138671 CGGCCCATTTCGCGATTTT 59.861 52.632 10.88 0.00 0.00 1.82
852 908 2.770589 CCGGCCCATTTCGCGATTT 61.771 57.895 10.88 0.00 0.00 2.17
853 909 3.209097 CCGGCCCATTTCGCGATT 61.209 61.111 10.88 0.00 0.00 3.34
857 913 4.868116 TAGGCCGGCCCATTTCGC 62.868 66.667 41.72 14.89 36.58 4.70
858 914 2.900337 GTAGGCCGGCCCATTTCG 60.900 66.667 41.72 0.00 36.58 3.46
859 915 2.119029 GTGTAGGCCGGCCCATTTC 61.119 63.158 41.72 25.50 36.58 2.17
860 916 2.044352 GTGTAGGCCGGCCCATTT 60.044 61.111 41.72 25.97 36.58 2.32
861 917 3.015145 AGTGTAGGCCGGCCCATT 61.015 61.111 41.72 26.38 36.58 3.16
862 918 3.797353 CAGTGTAGGCCGGCCCAT 61.797 66.667 41.72 27.18 36.58 4.00
864 920 4.162690 CTCAGTGTAGGCCGGCCC 62.163 72.222 41.72 27.67 36.58 5.80
865 921 4.162690 CCTCAGTGTAGGCCGGCC 62.163 72.222 39.29 39.29 0.00 6.13
866 922 3.075005 TCCTCAGTGTAGGCCGGC 61.075 66.667 21.18 21.18 36.51 6.13
867 923 2.893398 GTCCTCAGTGTAGGCCGG 59.107 66.667 0.00 0.00 36.51 6.13
868 924 2.341101 ACGTCCTCAGTGTAGGCCG 61.341 63.158 9.51 9.51 43.47 6.13
869 925 1.215647 CACGTCCTCAGTGTAGGCC 59.784 63.158 0.00 0.00 36.51 5.19
870 926 0.171455 CTCACGTCCTCAGTGTAGGC 59.829 60.000 0.00 0.00 40.28 3.93
871 927 0.171455 GCTCACGTCCTCAGTGTAGG 59.829 60.000 0.00 3.04 40.28 3.18
872 928 0.171455 GGCTCACGTCCTCAGTGTAG 59.829 60.000 0.00 0.00 40.28 2.74
873 929 0.538746 TGGCTCACGTCCTCAGTGTA 60.539 55.000 0.00 0.00 40.28 2.90
874 930 1.810606 CTGGCTCACGTCCTCAGTGT 61.811 60.000 0.00 0.00 40.28 3.55
875 931 1.080230 CTGGCTCACGTCCTCAGTG 60.080 63.158 0.00 0.00 40.71 3.66
876 932 0.827925 TTCTGGCTCACGTCCTCAGT 60.828 55.000 0.00 0.00 0.00 3.41
877 933 0.534412 ATTCTGGCTCACGTCCTCAG 59.466 55.000 0.00 0.00 0.00 3.35
878 934 0.247460 CATTCTGGCTCACGTCCTCA 59.753 55.000 0.00 0.00 0.00 3.86
879 935 0.247736 ACATTCTGGCTCACGTCCTC 59.752 55.000 0.00 0.00 0.00 3.71
880 936 0.687354 AACATTCTGGCTCACGTCCT 59.313 50.000 0.00 0.00 0.00 3.85
881 937 1.523758 AAACATTCTGGCTCACGTCC 58.476 50.000 0.00 0.00 0.00 4.79
882 938 2.918131 GCAAAACATTCTGGCTCACGTC 60.918 50.000 0.00 0.00 0.00 4.34
883 939 1.001378 GCAAAACATTCTGGCTCACGT 60.001 47.619 0.00 0.00 0.00 4.49
884 940 1.267806 AGCAAAACATTCTGGCTCACG 59.732 47.619 0.00 0.00 0.00 4.35
888 944 4.405116 TTTTGAGCAAAACATTCTGGCT 57.595 36.364 4.39 0.00 35.57 4.75
905 961 5.292101 TGGGCTCACGTTTAATTTTGTTTTG 59.708 36.000 0.00 0.00 0.00 2.44
989 1052 1.953686 CGAGAGGGAGAGAAGCCTAAG 59.046 57.143 0.00 0.00 0.00 2.18
990 1053 2.024825 GCGAGAGGGAGAGAAGCCTAA 61.025 57.143 0.00 0.00 0.00 2.69
991 1054 0.466555 GCGAGAGGGAGAGAAGCCTA 60.467 60.000 0.00 0.00 0.00 3.93
992 1055 1.756561 GCGAGAGGGAGAGAAGCCT 60.757 63.158 0.00 0.00 0.00 4.58
1004 1069 2.357517 AGTGCGTTTGGGCGAGAG 60.358 61.111 0.00 0.00 35.06 3.20
1005 1070 2.664851 CAGTGCGTTTGGGCGAGA 60.665 61.111 0.00 0.00 35.06 4.04
1079 1153 1.098050 GTCGTCGGAGCTAGGGTTTA 58.902 55.000 0.00 0.00 0.00 2.01
1131 1207 0.772124 AGTTCTTCTTGGGCCCCTGA 60.772 55.000 22.27 14.97 0.00 3.86
1316 1398 0.832135 GTCGATGGGCTCCCCTATGA 60.832 60.000 1.89 0.00 45.70 2.15
1359 1441 2.128507 GTCGGGGGAGAGAGCGATT 61.129 63.158 0.00 0.00 0.00 3.34
1508 1598 2.275134 TGCAGCATTTCAGACAGGAA 57.725 45.000 0.00 0.00 0.00 3.36
1523 1625 1.792949 GGCGTTACGATTAGGATGCAG 59.207 52.381 9.62 0.00 0.00 4.41
1536 1638 5.450592 AGCTCCTTAATAGTAGGCGTTAC 57.549 43.478 0.00 0.00 32.59 2.50
1540 1642 3.158676 AGGAGCTCCTTAATAGTAGGCG 58.841 50.000 30.40 0.00 46.09 5.52
1587 1706 1.277273 CTGAGCACCCTGTCTGATTGA 59.723 52.381 0.00 0.00 0.00 2.57
1588 1707 1.678123 CCTGAGCACCCTGTCTGATTG 60.678 57.143 0.00 0.00 0.00 2.67
1592 1711 1.004080 CACCTGAGCACCCTGTCTG 60.004 63.158 0.00 0.00 0.00 3.51
1619 1738 3.940640 CCCGATTCCACATGCGCG 61.941 66.667 0.00 0.00 0.00 6.86
1635 1754 5.176223 GCACATAAAATTGATGCACTATGCC 59.824 40.000 0.00 0.00 44.23 4.40
1644 1763 7.225145 CCACCCTATTTGCACATAAAATTGATG 59.775 37.037 0.00 0.00 0.00 3.07
1657 1776 3.448093 TCATTCACCACCCTATTTGCA 57.552 42.857 0.00 0.00 0.00 4.08
1686 1851 3.625853 AGATGTCTGAGAAGGTGATCGA 58.374 45.455 0.00 0.00 0.00 3.59
1743 1909 1.347707 CTGGTCCACTGCTGTTTCCTA 59.652 52.381 0.00 0.00 0.00 2.94
1763 1929 0.249657 CTCGGGTGAAGAGCATAGGC 60.250 60.000 0.00 0.00 41.61 3.93
1794 1960 1.555075 CCTGGAGCAAGCTACCAGTTA 59.445 52.381 25.13 1.81 46.61 2.24
1818 1984 4.439289 CCATAAGAAGGTGCAGCTTTTAGC 60.439 45.833 30.17 18.06 42.84 3.09
1918 2084 2.829120 GTGAAACTCCCTGAGTCTAGCT 59.171 50.000 0.00 0.00 42.59 3.32
1920 2086 3.436243 AGGTGAAACTCCCTGAGTCTAG 58.564 50.000 0.00 0.00 42.59 2.43
1921 2087 3.432378 GAGGTGAAACTCCCTGAGTCTA 58.568 50.000 0.00 0.00 42.59 2.59
1922 2088 2.252714 GAGGTGAAACTCCCTGAGTCT 58.747 52.381 0.00 0.00 42.59 3.24
1923 2089 2.753055 GAGGTGAAACTCCCTGAGTC 57.247 55.000 0.00 0.00 42.59 3.36
1934 2104 3.515502 CTGTCAGGTATCAGGAGGTGAAA 59.484 47.826 0.00 0.00 39.19 2.69
2028 2198 2.425668 CACAGCCATTCATGCAAGATGA 59.574 45.455 8.40 0.00 0.00 2.92
2055 2225 4.385825 TGTCACCACTATGAAACAGGAAC 58.614 43.478 0.00 0.00 0.00 3.62
2119 2373 9.442047 AAATGAAACATTTTACAGTTGTGGAAA 57.558 25.926 4.22 0.00 34.43 3.13
2161 2417 9.965824 GTCAATATTGAGAAACAAAAAGAAGGA 57.034 29.630 18.47 0.00 42.03 3.36
2175 2431 6.712095 GCATACCTTGGATGTCAATATTGAGA 59.288 38.462 18.47 17.58 37.98 3.27
2208 2464 5.772672 TGTCCCTGTACAACATAGCAAAAAT 59.227 36.000 0.00 0.00 0.00 1.82
2215 2471 5.059161 CCATCATGTCCCTGTACAACATAG 58.941 45.833 10.55 6.75 32.54 2.23
2565 2988 7.225538 ACATCGAGAAAATAATGAGGCTGTAAG 59.774 37.037 0.00 0.00 0.00 2.34
2628 3051 4.817318 TTTGCTTTCAAGGTTCCAAACT 57.183 36.364 0.00 0.00 33.12 2.66
2697 3120 1.486310 AGCCCGTCTTCTGATAATGCA 59.514 47.619 0.00 0.00 0.00 3.96
2750 3173 2.756760 GCCAGATTTCAATCCTTCTGCA 59.243 45.455 0.00 0.00 35.38 4.41
2850 3273 5.048782 GTGTCTAGCAATGACAAACCAATGA 60.049 40.000 7.78 0.00 44.63 2.57
2986 3411 7.020009 AGACTTATATTTAGGAAGGGAGGGAG 58.980 42.308 0.00 0.00 0.00 4.30
2987 3412 6.946526 AGACTTATATTTAGGAAGGGAGGGA 58.053 40.000 0.00 0.00 0.00 4.20
2988 3413 7.634526 AAGACTTATATTTAGGAAGGGAGGG 57.365 40.000 0.00 0.00 0.00 4.30
3007 3432 9.487442 AGTCTCTTATTGGAATCTCTAAAGACT 57.513 33.333 0.00 0.00 33.32 3.24
3014 3439 9.647918 TGTATGTAGTCTCTTATTGGAATCTCT 57.352 33.333 0.00 0.00 0.00 3.10
3015 3440 9.906660 CTGTATGTAGTCTCTTATTGGAATCTC 57.093 37.037 0.00 0.00 0.00 2.75
3016 3441 9.647918 TCTGTATGTAGTCTCTTATTGGAATCT 57.352 33.333 0.00 0.00 0.00 2.40
3017 3442 9.906660 CTCTGTATGTAGTCTCTTATTGGAATC 57.093 37.037 0.00 0.00 0.00 2.52
3018 3443 8.364142 GCTCTGTATGTAGTCTCTTATTGGAAT 58.636 37.037 0.00 0.00 0.00 3.01
3019 3444 7.342026 TGCTCTGTATGTAGTCTCTTATTGGAA 59.658 37.037 0.00 0.00 0.00 3.53
3020 3445 6.833933 TGCTCTGTATGTAGTCTCTTATTGGA 59.166 38.462 0.00 0.00 0.00 3.53
3021 3446 7.043961 TGCTCTGTATGTAGTCTCTTATTGG 57.956 40.000 0.00 0.00 0.00 3.16
3022 3447 8.932945 TTTGCTCTGTATGTAGTCTCTTATTG 57.067 34.615 0.00 0.00 0.00 1.90
3024 3449 9.539825 CATTTTGCTCTGTATGTAGTCTCTTAT 57.460 33.333 0.00 0.00 0.00 1.73
3025 3450 8.749354 TCATTTTGCTCTGTATGTAGTCTCTTA 58.251 33.333 0.00 0.00 0.00 2.10
3026 3451 7.615403 TCATTTTGCTCTGTATGTAGTCTCTT 58.385 34.615 0.00 0.00 0.00 2.85
3027 3452 7.093552 ACTCATTTTGCTCTGTATGTAGTCTCT 60.094 37.037 0.00 0.00 0.00 3.10
3028 3453 7.009999 CACTCATTTTGCTCTGTATGTAGTCTC 59.990 40.741 0.00 0.00 0.00 3.36
3029 3454 6.815641 CACTCATTTTGCTCTGTATGTAGTCT 59.184 38.462 0.00 0.00 0.00 3.24
3030 3455 6.813649 TCACTCATTTTGCTCTGTATGTAGTC 59.186 38.462 0.00 0.00 0.00 2.59
3031 3456 6.701340 TCACTCATTTTGCTCTGTATGTAGT 58.299 36.000 0.00 0.00 0.00 2.73
3032 3457 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
3033 3458 8.043113 AGATTCACTCATTTTGCTCTGTATGTA 58.957 33.333 0.00 0.00 0.00 2.29
3034 3459 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
3035 3460 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
3036 3461 8.043113 TGTAGATTCACTCATTTTGCTCTGTAT 58.957 33.333 0.00 0.00 0.00 2.29
3037 3462 7.331934 GTGTAGATTCACTCATTTTGCTCTGTA 59.668 37.037 0.00 0.00 35.68 2.74
3038 3463 6.148480 GTGTAGATTCACTCATTTTGCTCTGT 59.852 38.462 0.00 0.00 35.68 3.41
3039 3464 6.370994 AGTGTAGATTCACTCATTTTGCTCTG 59.629 38.462 0.00 0.00 44.07 3.35
3040 3465 6.471146 AGTGTAGATTCACTCATTTTGCTCT 58.529 36.000 0.00 0.00 44.07 4.09
3041 3466 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3081 3506 9.872721 TTTCAATACAAACTACATACGGATGTA 57.127 29.630 19.32 19.32 44.77 2.29
3083 3508 9.864034 GATTTCAATACAAACTACATACGGATG 57.136 33.333 5.94 5.94 39.16 3.51
3084 3509 9.832445 AGATTTCAATACAAACTACATACGGAT 57.168 29.630 0.00 0.00 0.00 4.18
3085 3510 9.309516 GAGATTTCAATACAAACTACATACGGA 57.690 33.333 0.00 0.00 0.00 4.69
3086 3511 9.314321 AGAGATTTCAATACAAACTACATACGG 57.686 33.333 0.00 0.00 0.00 4.02
3116 3541 9.819267 CTCCTTCCGTTTCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
3117 3542 8.979534 ACTCCTTCCGTTTCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
3124 3549 9.638176 AGTATCTACTCCTTCCGTTTCTAAATA 57.362 33.333 0.00 0.00 0.00 1.40
3125 3550 8.536340 AGTATCTACTCCTTCCGTTTCTAAAT 57.464 34.615 0.00 0.00 0.00 1.40
3126 3551 7.951347 AGTATCTACTCCTTCCGTTTCTAAA 57.049 36.000 0.00 0.00 0.00 1.85
3127 3552 7.951347 AAGTATCTACTCCTTCCGTTTCTAA 57.049 36.000 0.00 0.00 34.99 2.10
3128 3553 7.951347 AAAGTATCTACTCCTTCCGTTTCTA 57.049 36.000 0.00 0.00 34.99 2.10
3129 3554 6.854091 AAAGTATCTACTCCTTCCGTTTCT 57.146 37.500 0.00 0.00 34.99 2.52
3130 3555 6.183360 GCAAAAGTATCTACTCCTTCCGTTTC 60.183 42.308 0.00 0.00 34.99 2.78
3131 3556 5.642491 GCAAAAGTATCTACTCCTTCCGTTT 59.358 40.000 0.00 0.00 34.99 3.60
3132 3557 5.176592 GCAAAAGTATCTACTCCTTCCGTT 58.823 41.667 0.00 0.00 34.99 4.44
3133 3558 4.222145 TGCAAAAGTATCTACTCCTTCCGT 59.778 41.667 0.00 0.00 34.99 4.69
3134 3559 4.755411 TGCAAAAGTATCTACTCCTTCCG 58.245 43.478 0.00 0.00 34.99 4.30
3135 3560 6.425417 GCTATGCAAAAGTATCTACTCCTTCC 59.575 42.308 0.00 0.00 34.99 3.46
3136 3561 7.213678 AGCTATGCAAAAGTATCTACTCCTTC 58.786 38.462 0.00 0.00 34.99 3.46
3137 3562 7.130681 AGCTATGCAAAAGTATCTACTCCTT 57.869 36.000 0.00 0.00 34.99 3.36
3138 3563 6.739331 AGCTATGCAAAAGTATCTACTCCT 57.261 37.500 0.00 0.00 34.99 3.69
3139 3564 6.588373 GCTAGCTATGCAAAAGTATCTACTCC 59.412 42.308 7.70 0.00 34.99 3.85
3140 3565 7.148641 TGCTAGCTATGCAAAAGTATCTACTC 58.851 38.462 17.23 0.00 37.51 2.59
3141 3566 7.055667 TGCTAGCTATGCAAAAGTATCTACT 57.944 36.000 17.23 0.00 37.51 2.57
3142 3567 7.897575 ATGCTAGCTATGCAAAAGTATCTAC 57.102 36.000 17.23 0.00 44.01 2.59
3143 3568 7.604164 GGAATGCTAGCTATGCAAAAGTATCTA 59.396 37.037 17.23 0.00 44.01 1.98
3144 3569 6.429385 GGAATGCTAGCTATGCAAAAGTATCT 59.571 38.462 17.23 1.57 44.01 1.98
3158 3583 6.940739 ACTGATAAATATCGGAATGCTAGCT 58.059 36.000 17.23 0.00 40.69 3.32
3248 3674 4.133820 CCACACATTCACAACCTACAGAA 58.866 43.478 0.00 0.00 0.00 3.02
3454 3880 4.220382 TGCCAAATCAATGTACCTTTCCAG 59.780 41.667 0.00 0.00 0.00 3.86
3474 3900 9.726438 ATGGAGTATTTAAGAACTGTATATGCC 57.274 33.333 0.00 0.00 0.00 4.40
3497 3923 5.067954 TGCATTCTAGATGGACATGAATGG 58.932 41.667 17.92 7.09 42.21 3.16
3523 3949 4.796038 ATGACCAGAAAAGCAATTGAGG 57.204 40.909 10.34 1.30 0.00 3.86
3606 4032 2.877154 AGCCCCTTCTAGATTCCTCA 57.123 50.000 0.00 0.00 0.00 3.86
3753 4179 9.770097 TCAAGAATCTCATCATTGTAACCTATC 57.230 33.333 0.00 0.00 0.00 2.08
3762 4188 9.856488 AACTTCAAATCAAGAATCTCATCATTG 57.144 29.630 0.00 0.00 0.00 2.82
3819 4245 0.678048 CCTGCTCCAAGTTAGTGGCC 60.678 60.000 0.00 0.00 38.68 5.36
3875 4301 5.441500 TGGTGTGAGAAATTGGTTACAGAA 58.558 37.500 0.00 0.00 0.00 3.02
3876 4302 5.042463 TGGTGTGAGAAATTGGTTACAGA 57.958 39.130 0.00 0.00 0.00 3.41
3877 4303 5.964958 ATGGTGTGAGAAATTGGTTACAG 57.035 39.130 0.00 0.00 0.00 2.74
3878 4304 6.239176 GGAAATGGTGTGAGAAATTGGTTACA 60.239 38.462 0.00 0.00 0.00 2.41
3879 4305 6.015434 AGGAAATGGTGTGAGAAATTGGTTAC 60.015 38.462 0.00 0.00 0.00 2.50
3906 4337 4.865925 CGTCATAAACACGGACCTGAAATA 59.134 41.667 0.00 0.00 33.46 1.40
3943 4375 1.164411 CCGCCAGCACATAAGAACAA 58.836 50.000 0.00 0.00 0.00 2.83
4004 4436 3.054361 ACAACAAGTGTCTTCCCAGAAGT 60.054 43.478 4.38 0.00 34.38 3.01
4164 4596 7.888514 TTCCATATCCCACAATCTTACCTAT 57.111 36.000 0.00 0.00 0.00 2.57
4165 4597 7.699709 TTTCCATATCCCACAATCTTACCTA 57.300 36.000 0.00 0.00 0.00 3.08
4269 4701 1.609208 ACCTGCTGCCACTAACAAAG 58.391 50.000 0.00 0.00 0.00 2.77
4323 4755 7.761651 TCACTGAAGAATTGAATATCACTCG 57.238 36.000 0.00 0.00 0.00 4.18
4340 4772 3.010420 AGAGTCACGATCGATCACTGAA 58.990 45.455 24.34 7.05 0.00 3.02
4350 4782 4.330620 ACGTCTAGAAGAAGAGTCACGATC 59.669 45.833 12.91 0.00 0.00 3.69
4363 4795 9.263538 ACTGACAGATAACTATACGTCTAGAAG 57.736 37.037 14.28 3.94 0.00 2.85
4398 4841 4.822036 CCAAAACGTGGTATCTCAACAA 57.178 40.909 0.00 0.00 43.20 2.83
4422 4865 1.824230 GCCCATAGACATGCAAAACCA 59.176 47.619 0.00 0.00 0.00 3.67
4462 4905 5.122396 ACTCGATATCAAAGGCAAAGTCAAC 59.878 40.000 3.12 0.00 0.00 3.18
4523 4968 3.906720 TTCCCATGGCTAGTTGACTAC 57.093 47.619 6.09 0.00 0.00 2.73
4605 5051 6.523840 ACATGTTTGCATCCACAAGTAAAAT 58.476 32.000 0.00 0.00 31.99 1.82
4634 5081 5.649782 ATTTGGACTTAGCATTGGTTCAG 57.350 39.130 0.00 0.00 0.00 3.02
4720 5170 2.171003 GGGAAATGGACAAGGGAACTG 58.829 52.381 0.00 0.00 42.68 3.16
4818 5268 6.461092 CGGTCACTAATGATAAGGCAGACTTA 60.461 42.308 0.00 0.00 45.24 2.24
4819 5269 5.675538 GGTCACTAATGATAAGGCAGACTT 58.324 41.667 0.00 0.00 43.28 3.01
4820 5270 4.202161 CGGTCACTAATGATAAGGCAGACT 60.202 45.833 0.00 0.00 37.14 3.24
4821 5271 4.051922 CGGTCACTAATGATAAGGCAGAC 58.948 47.826 0.00 0.00 37.14 3.51
4822 5272 3.958147 TCGGTCACTAATGATAAGGCAGA 59.042 43.478 0.00 0.00 37.14 4.26
4823 5273 4.322080 TCGGTCACTAATGATAAGGCAG 57.678 45.455 0.00 0.00 37.14 4.85
4970 5420 0.975040 AACCACTGCAAACAAGGCCA 60.975 50.000 5.01 0.00 0.00 5.36
4991 5441 7.507277 AGTTAGCATATACTCAATCTCACCTCA 59.493 37.037 0.00 0.00 0.00 3.86
5015 5465 4.691216 GTCAAAAGAGCCTTCGTGATAAGT 59.309 41.667 0.00 0.00 0.00 2.24
5022 5472 3.071167 AGGTAAGTCAAAAGAGCCTTCGT 59.929 43.478 0.00 0.00 0.00 3.85
5023 5473 3.665190 AGGTAAGTCAAAAGAGCCTTCG 58.335 45.455 0.00 0.00 0.00 3.79
5041 5491 4.529769 TGAGATCTGACAGTTCAATGAGGT 59.470 41.667 14.48 0.00 0.00 3.85
5093 5543 4.103311 AGGTTAGGGAGTTTCCATATGCTC 59.897 45.833 0.00 0.00 38.64 4.26
5117 5567 3.764237 TTAAGGACAACAGAGGACACC 57.236 47.619 0.00 0.00 0.00 4.16
5174 5624 5.825151 TGTTATGACACATTGTTCAACAGGA 59.175 36.000 0.00 0.00 0.00 3.86
5252 5702 4.906618 ACGTATGACCCTCAAATGTCTTT 58.093 39.130 0.00 0.00 32.67 2.52
5376 5826 5.221461 ACAAGAGAATCAACCGAGTTACACT 60.221 40.000 0.00 0.00 37.82 3.55
5392 5842 5.991606 CAGTAAGGACATCACAACAAGAGAA 59.008 40.000 0.00 0.00 0.00 2.87
5395 5845 5.290493 ACAGTAAGGACATCACAACAAGA 57.710 39.130 0.00 0.00 0.00 3.02
5520 5970 9.890629 ACTAAGCTCACATTACAGATGATAAAA 57.109 29.630 0.00 0.00 0.00 1.52
5601 6051 2.959030 GCCAATCCCCCATAAAGACTTC 59.041 50.000 0.00 0.00 0.00 3.01
5616 6066 4.142403 TGCATAGTGTTTTAGCTGCCAATC 60.142 41.667 0.00 0.00 0.00 2.67
5648 6101 7.282675 TCAATTCTCTTAAAACACCGGTAACAA 59.717 33.333 6.87 0.00 0.00 2.83
5659 6112 8.787852 AGGTTCATCACTCAATTCTCTTAAAAC 58.212 33.333 0.00 0.00 0.00 2.43
5715 6169 4.318332 TGCTCTCGAATGAAACAGAACAT 58.682 39.130 0.00 0.00 0.00 2.71
5804 6258 3.207474 AGCTAAGCAACTCGCAAATTG 57.793 42.857 0.00 0.00 46.13 2.32
5814 6268 7.590279 TGAACTGGTTAATAAAGCTAAGCAAC 58.410 34.615 0.00 0.00 36.59 4.17
6036 6491 4.964593 AGCATTTCAGTTTTCTTGCCAAT 58.035 34.783 0.00 0.00 32.28 3.16
6107 6562 7.227156 GGAAATCTTCCTGCTTATCTTCCATA 58.773 38.462 0.00 0.00 46.57 2.74
6190 6649 6.760770 CCAAGGAATTAAACAAAGACAAGCAA 59.239 34.615 0.00 0.00 0.00 3.91
6210 6669 1.067250 CGGTGTTGTTTGCCCAAGG 59.933 57.895 0.00 0.00 0.00 3.61
6280 6742 3.085952 TCCAAGGAGCCATTTACAAGG 57.914 47.619 0.00 0.00 0.00 3.61
6284 6746 4.058817 CGTAGATCCAAGGAGCCATTTAC 58.941 47.826 0.00 0.00 0.00 2.01
6305 6915 3.878086 AATGCCGATAAGTATTGCACG 57.122 42.857 0.00 0.00 0.00 5.34
6320 6930 1.994779 CCTGCAACAATCGAAAATGCC 59.005 47.619 11.63 0.00 36.20 4.40
6329 6939 2.290577 ACTTCCTCCTCCTGCAACAATC 60.291 50.000 0.00 0.00 0.00 2.67
6360 6970 2.997986 CACTGCATTTTCCAATTCCTGC 59.002 45.455 0.00 0.00 0.00 4.85
6462 7072 6.431234 CCTTTAAAGATGAGTACCTGCAAAGT 59.569 38.462 16.98 0.00 0.00 2.66
6528 7146 1.141657 AGCTTTCCTGCAGAGACAACA 59.858 47.619 17.39 0.00 34.99 3.33
6529 7147 1.534595 CAGCTTTCCTGCAGAGACAAC 59.465 52.381 17.39 0.00 34.21 3.32
6807 7426 4.619973 TGCCTTTTATCTGCACAAACAAG 58.380 39.130 0.00 0.00 0.00 3.16
6864 7483 3.722147 GACTCTGCTGAAGTGTCTTTGA 58.278 45.455 10.01 0.00 43.23 2.69
7033 7652 0.616891 GGCTTTTCCGGGGTCTCTAA 59.383 55.000 0.00 0.00 0.00 2.10
7089 7711 6.929606 TCACCTTCTTACTACTTTTCTTGCTC 59.070 38.462 0.00 0.00 0.00 4.26
7125 7747 1.217882 CCTCGACAGAAACAGCGTTT 58.782 50.000 6.41 6.41 0.00 3.60
7177 7812 0.601057 GGCTACAAAATTGGTGGCGT 59.399 50.000 2.76 0.00 42.86 5.68
7211 7846 7.325821 GTCACGAAGCAAAATAAATGTGATTCA 59.674 33.333 0.00 0.00 37.49 2.57
7350 7985 5.964958 AATATAGCACCATTGTACATGCC 57.035 39.130 14.08 0.00 38.92 4.40
7351 7986 6.094048 CCCTAATATAGCACCATTGTACATGC 59.906 42.308 10.53 10.53 38.39 4.06
7352 7987 6.094048 GCCCTAATATAGCACCATTGTACATG 59.906 42.308 0.00 0.00 0.00 3.21
7353 7988 6.180472 GCCCTAATATAGCACCATTGTACAT 58.820 40.000 0.00 0.00 0.00 2.29
7354 7989 5.072464 TGCCCTAATATAGCACCATTGTACA 59.928 40.000 0.00 0.00 0.00 2.90
7355 7990 5.556915 TGCCCTAATATAGCACCATTGTAC 58.443 41.667 0.00 0.00 0.00 2.90
7356 7991 5.834281 TGCCCTAATATAGCACCATTGTA 57.166 39.130 0.00 0.00 0.00 2.41
7357 7992 4.722526 TGCCCTAATATAGCACCATTGT 57.277 40.909 0.00 0.00 0.00 2.71
7358 7993 5.255687 TCATGCCCTAATATAGCACCATTG 58.744 41.667 0.00 0.00 39.77 2.82
7359 7994 5.519183 TCATGCCCTAATATAGCACCATT 57.481 39.130 0.00 0.00 39.77 3.16
7360 7995 5.014544 ACTTCATGCCCTAATATAGCACCAT 59.985 40.000 0.00 0.00 39.77 3.55
7361 7996 4.350816 ACTTCATGCCCTAATATAGCACCA 59.649 41.667 0.00 0.00 39.77 4.17
7362 7997 4.911390 ACTTCATGCCCTAATATAGCACC 58.089 43.478 0.00 0.00 39.77 5.01
7363 7998 6.884280 AAACTTCATGCCCTAATATAGCAC 57.116 37.500 0.00 0.00 39.77 4.40
7364 7999 8.436778 TCTAAAACTTCATGCCCTAATATAGCA 58.563 33.333 0.00 0.00 41.50 3.49
7365 8000 8.848474 TCTAAAACTTCATGCCCTAATATAGC 57.152 34.615 0.00 0.00 0.00 2.97
7370 8005 8.815912 ACATTTTCTAAAACTTCATGCCCTAAT 58.184 29.630 0.00 0.00 0.00 1.73
7371 8006 8.189119 ACATTTTCTAAAACTTCATGCCCTAA 57.811 30.769 0.00 0.00 0.00 2.69
7372 8007 7.775053 ACATTTTCTAAAACTTCATGCCCTA 57.225 32.000 0.00 0.00 0.00 3.53
7373 8008 6.670695 ACATTTTCTAAAACTTCATGCCCT 57.329 33.333 0.00 0.00 0.00 5.19
7374 8009 6.347644 GCAACATTTTCTAAAACTTCATGCCC 60.348 38.462 0.00 0.00 0.00 5.36
7375 8010 6.202570 TGCAACATTTTCTAAAACTTCATGCC 59.797 34.615 0.00 0.00 0.00 4.40
7376 8011 7.176285 TGCAACATTTTCTAAAACTTCATGC 57.824 32.000 0.00 0.00 0.00 4.06
7377 8012 7.569957 GCCTGCAACATTTTCTAAAACTTCATG 60.570 37.037 0.00 0.00 0.00 3.07
7378 8013 6.424812 GCCTGCAACATTTTCTAAAACTTCAT 59.575 34.615 0.00 0.00 0.00 2.57
7379 8014 5.752955 GCCTGCAACATTTTCTAAAACTTCA 59.247 36.000 0.00 0.00 0.00 3.02
7380 8015 5.177511 GGCCTGCAACATTTTCTAAAACTTC 59.822 40.000 0.00 0.00 0.00 3.01
7381 8016 5.056480 GGCCTGCAACATTTTCTAAAACTT 58.944 37.500 0.00 0.00 0.00 2.66
7382 8017 4.100808 TGGCCTGCAACATTTTCTAAAACT 59.899 37.500 3.32 0.00 0.00 2.66
7383 8018 4.376146 TGGCCTGCAACATTTTCTAAAAC 58.624 39.130 3.32 0.00 0.00 2.43
7387 8022 3.700538 AGATGGCCTGCAACATTTTCTA 58.299 40.909 3.32 0.00 0.00 2.10
7393 8028 2.590821 GGATAAGATGGCCTGCAACAT 58.409 47.619 3.32 0.00 0.00 2.71
7422 8057 2.694628 TGCAAGACAATCAAGGCAAACT 59.305 40.909 0.00 0.00 0.00 2.66
7490 8125 2.547211 CCAGATCGCAGATCCAACAATC 59.453 50.000 12.81 0.00 45.12 2.67
7556 8191 2.219875 ACTCCCCACTCAGCCACAG 61.220 63.158 0.00 0.00 0.00 3.66
7584 8219 3.847671 TGGGACACAGTCACACAATTA 57.152 42.857 0.00 0.00 41.38 1.40
7585 8220 2.727123 TGGGACACAGTCACACAATT 57.273 45.000 0.00 0.00 41.38 2.32
7663 8298 6.955963 GTGACAACTAACATAAGATGCTTTCG 59.044 38.462 0.00 0.00 0.00 3.46
7675 8310 2.561478 AAGGCGGTGACAACTAACAT 57.439 45.000 0.00 0.00 0.00 2.71
7676 8311 2.335316 AAAGGCGGTGACAACTAACA 57.665 45.000 0.00 0.00 0.00 2.41
7677 8312 2.349155 CGAAAAGGCGGTGACAACTAAC 60.349 50.000 0.00 0.00 0.00 2.34
7688 8325 2.622962 GGGGACAACGAAAAGGCGG 61.623 63.158 0.00 0.00 35.12 6.13
7697 8334 3.909258 CTCGTGACCGGGGACAACG 62.909 68.421 6.32 8.35 33.95 4.10
7716 8353 2.936050 CCGTTTTACCGGCGATTATC 57.064 50.000 9.30 0.00 41.78 1.75
7746 8383 2.032681 AACTCCTGCTGCCGAACC 59.967 61.111 0.00 0.00 0.00 3.62
7777 8414 8.477984 AAATTCGCACAACAATATGCTTATTT 57.522 26.923 2.22 0.00 39.79 1.40
7784 8421 5.286797 CCTGTGAAATTCGCACAACAATATG 59.713 40.000 4.98 0.00 44.75 1.78
7812 8449 3.843999 ACAATCAGCTTCTCTCGAAGTC 58.156 45.455 4.26 0.00 46.65 3.01
7813 8450 3.951775 ACAATCAGCTTCTCTCGAAGT 57.048 42.857 4.26 0.00 46.65 3.01
7815 8452 4.177026 GCTTACAATCAGCTTCTCTCGAA 58.823 43.478 0.00 0.00 34.15 3.71
7829 8466 3.454375 CGGACGTTGATAGGCTTACAAT 58.546 45.455 0.00 0.00 0.00 2.71
7867 8507 2.670905 TGTCTGGCATATCAAAACGTCG 59.329 45.455 0.00 0.00 0.00 5.12
7875 8515 2.027653 TCGGTTGTTGTCTGGCATATCA 60.028 45.455 0.00 0.00 0.00 2.15
7903 8543 1.001633 GAGTGTTTACGAAGCAGGGGA 59.998 52.381 0.00 0.00 0.00 4.81
7904 8544 1.270625 TGAGTGTTTACGAAGCAGGGG 60.271 52.381 0.00 0.00 0.00 4.79
7907 8547 2.538449 ACGTTGAGTGTTTACGAAGCAG 59.462 45.455 0.00 0.00 38.56 4.24
7908 8548 2.536803 GACGTTGAGTGTTTACGAAGCA 59.463 45.455 0.00 0.00 38.56 3.91
8110 8754 8.649841 CGATGTTCATTTTAGCATGTTCATTTT 58.350 29.630 0.00 0.00 0.00 1.82
8111 8755 8.028354 TCGATGTTCATTTTAGCATGTTCATTT 58.972 29.630 0.00 0.00 0.00 2.32
8112 8756 7.537715 TCGATGTTCATTTTAGCATGTTCATT 58.462 30.769 0.00 0.00 0.00 2.57
8113 8757 7.087409 TCGATGTTCATTTTAGCATGTTCAT 57.913 32.000 0.00 0.00 0.00 2.57
8114 8758 6.493449 TCGATGTTCATTTTAGCATGTTCA 57.507 33.333 0.00 0.00 0.00 3.18
8115 8759 6.355405 CGATCGATGTTCATTTTAGCATGTTC 59.645 38.462 10.26 0.00 0.00 3.18
8116 8760 6.194463 CGATCGATGTTCATTTTAGCATGTT 58.806 36.000 10.26 0.00 0.00 2.71
8117 8761 5.741425 CGATCGATGTTCATTTTAGCATGT 58.259 37.500 10.26 0.00 0.00 3.21
8118 8762 4.610122 GCGATCGATGTTCATTTTAGCATG 59.390 41.667 21.57 0.00 0.00 4.06
8119 8763 4.273235 TGCGATCGATGTTCATTTTAGCAT 59.727 37.500 21.57 0.00 0.00 3.79
8120 8764 3.620821 TGCGATCGATGTTCATTTTAGCA 59.379 39.130 21.57 0.00 0.00 3.49
8121 8765 3.962481 GTGCGATCGATGTTCATTTTAGC 59.038 43.478 21.57 0.00 0.00 3.09
8122 8766 4.033932 TGGTGCGATCGATGTTCATTTTAG 59.966 41.667 21.57 0.00 0.00 1.85
8158 8802 2.684881 GGATTCCTGTATGCCACACAAG 59.315 50.000 0.00 0.00 32.33 3.16
8207 8851 0.396435 TCCTGTGGGTCATGTCACAC 59.604 55.000 17.12 17.12 41.55 3.82
8224 8868 4.594920 TCAGATTTGAGACCCCATATCTCC 59.405 45.833 0.00 0.00 41.72 3.71
8245 8889 6.512342 TTCCTTTTAACGGAAACAAGTTCA 57.488 33.333 0.16 0.00 37.59 3.18
8249 8893 7.918562 TCAGATTTTCCTTTTAACGGAAACAAG 59.081 33.333 14.02 6.42 46.92 3.16
8253 8897 8.002984 AGTTCAGATTTTCCTTTTAACGGAAA 57.997 30.769 10.95 10.95 45.95 3.13
8281 8925 8.275632 GGTTTCGTGTAGTTAACTCGTATTTTT 58.724 33.333 12.39 0.00 43.69 1.94
8286 8930 5.212194 GTGGTTTCGTGTAGTTAACTCGTA 58.788 41.667 12.39 0.82 43.69 3.43
8296 8940 4.347096 TGCGGTGGTTTCGTGTAG 57.653 55.556 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.