Multiple sequence alignment - TraesCS2A01G447400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G447400 chr2A 100.000 3161 0 0 1 3161 696306042 696309202 0.000000e+00 5838.0
1 TraesCS2A01G447400 chr2A 90.080 1250 98 10 1679 2921 696219822 696221052 0.000000e+00 1598.0
2 TraesCS2A01G447400 chr2A 91.587 630 36 7 984 1613 696040416 696041028 0.000000e+00 854.0
3 TraesCS2A01G447400 chr2A 88.700 646 39 11 966 1595 696219183 696219810 0.000000e+00 758.0
4 TraesCS2A01G447400 chr2A 81.335 734 80 26 1663 2346 696041021 696041747 7.710000e-151 544.0
5 TraesCS2A01G447400 chr2A 79.552 714 84 30 1663 2314 695999724 696000437 1.340000e-123 453.0
6 TraesCS2A01G447400 chr2A 84.456 193 18 5 2918 3100 715765238 715765048 2.500000e-41 180.0
7 TraesCS2A01G447400 chr2D 89.539 1281 101 12 1649 2921 556619731 556620986 0.000000e+00 1592.0
8 TraesCS2A01G447400 chr2D 89.085 1301 103 18 1618 2901 556366032 556367310 0.000000e+00 1580.0
9 TraesCS2A01G447400 chr2D 92.453 742 44 8 854 1593 556619001 556619732 0.000000e+00 1050.0
10 TraesCS2A01G447400 chr2D 87.862 898 83 10 2031 2921 556333872 556334750 0.000000e+00 1031.0
11 TraesCS2A01G447400 chr2D 92.920 678 48 0 1649 2326 556408616 556409293 0.000000e+00 987.0
12 TraesCS2A01G447400 chr2D 89.245 781 44 10 820 1595 556407874 556408619 0.000000e+00 941.0
13 TraesCS2A01G447400 chr2D 88.336 763 59 15 854 1613 556267092 556267827 0.000000e+00 889.0
14 TraesCS2A01G447400 chr2D 87.632 760 69 15 854 1613 556350412 556351146 0.000000e+00 859.0
15 TraesCS2A01G447400 chr2D 85.366 779 76 29 829 1595 556365329 556366081 0.000000e+00 773.0
16 TraesCS2A01G447400 chr2D 89.642 531 28 5 983 1507 556318398 556318907 0.000000e+00 651.0
17 TraesCS2A01G447400 chr2D 87.119 590 51 20 999 1575 556642397 556642974 0.000000e+00 645.0
18 TraesCS2A01G447400 chr2D 84.704 608 74 14 1 602 107846339 107845745 9.770000e-165 590.0
19 TraesCS2A01G447400 chr2D 90.130 385 31 3 1649 2026 556333374 556333758 7.880000e-136 494.0
20 TraesCS2A01G447400 chr2D 79.243 713 87 29 1663 2314 556267820 556268532 1.040000e-119 440.0
21 TraesCS2A01G447400 chr2D 89.595 346 5 5 1 327 647385034 647385367 8.160000e-111 411.0
22 TraesCS2A01G447400 chr2D 77.762 724 82 44 1669 2314 556339510 556340232 3.850000e-99 372.0
23 TraesCS2A01G447400 chr2D 92.920 226 14 2 602 825 599600975 599601200 8.450000e-86 327.0
24 TraesCS2A01G447400 chr2D 88.390 267 18 5 1349 1615 556339260 556339513 3.060000e-80 309.0
25 TraesCS2A01G447400 chr2B 89.600 875 68 7 1679 2531 663886621 663887494 0.000000e+00 1090.0
26 TraesCS2A01G447400 chr2B 89.859 779 50 7 820 1595 663885857 663886609 0.000000e+00 974.0
27 TraesCS2A01G447400 chr2B 88.105 765 57 16 854 1615 663828835 663829568 0.000000e+00 878.0
28 TraesCS2A01G447400 chr2B 86.957 782 66 21 820 1591 663837840 663838595 0.000000e+00 846.0
29 TraesCS2A01G447400 chr2B 78.760 758 80 31 1663 2346 663829559 663830309 1.740000e-117 433.0
30 TraesCS2A01G447400 chr2B 79.179 682 79 29 1669 2299 663838592 663839261 6.310000e-112 414.0
31 TraesCS2A01G447400 chr2B 82.828 396 47 10 2533 2921 663887611 663887992 5.050000e-88 335.0
32 TraesCS2A01G447400 chr3A 94.643 616 18 9 1 601 736796666 736797281 0.000000e+00 941.0
33 TraesCS2A01G447400 chr3A 92.332 639 11 6 1 602 7346940 7347577 0.000000e+00 874.0
34 TraesCS2A01G447400 chr3A 92.175 639 13 5 1 602 26155074 26154436 0.000000e+00 869.0
35 TraesCS2A01G447400 chr3A 91.393 639 18 6 1 602 747585074 747585712 0.000000e+00 841.0
36 TraesCS2A01G447400 chr3A 94.864 331 7 7 1 327 728532457 728532781 2.810000e-140 508.0
37 TraesCS2A01G447400 chr3A 95.434 219 10 0 602 820 71577708 71577926 1.800000e-92 350.0
38 TraesCS2A01G447400 chr3A 87.222 180 20 3 2920 3097 750541602 750541424 5.350000e-48 202.0
39 TraesCS2A01G447400 chr1A 93.811 614 19 9 1 602 14362628 14362022 0.000000e+00 905.0
40 TraesCS2A01G447400 chr1A 90.909 352 12 4 1 332 290629776 290629425 3.720000e-124 455.0
41 TraesCS2A01G447400 chr1A 86.905 168 21 1 2912 3079 548793159 548793325 1.500000e-43 187.0
42 TraesCS2A01G447400 chr1A 83.019 212 23 8 2912 3112 202093026 202093235 2.500000e-41 180.0
43 TraesCS2A01G447400 chr1A 82.524 206 25 9 2911 3108 7664777 7664979 1.510000e-38 171.0
44 TraesCS2A01G447400 chr1A 82.569 109 15 4 1439 1545 545024892 545024786 3.360000e-15 93.5
45 TraesCS2A01G447400 chr1A 81.651 109 16 4 1439 1545 544928195 544928301 1.560000e-13 87.9
46 TraesCS2A01G447400 chr6A 92.622 637 12 6 1 602 11244492 11245128 0.000000e+00 883.0
47 TraesCS2A01G447400 chr6A 97.569 288 7 0 315 602 412684 412971 7.880000e-136 494.0
48 TraesCS2A01G447400 chr6A 93.694 333 14 5 1 327 412336 412667 2.830000e-135 492.0
49 TraesCS2A01G447400 chr6A 78.017 232 34 13 1046 1271 420973751 420973971 2.560000e-26 130.0
50 TraesCS2A01G447400 chr6A 77.922 231 36 10 1046 1271 421226106 421226326 2.560000e-26 130.0
51 TraesCS2A01G447400 chr6A 80.447 179 26 5 1046 1222 421102807 421102978 9.200000e-26 128.0
52 TraesCS2A01G447400 chr6A 77.489 231 37 12 1046 1271 421367924 421368144 1.190000e-24 124.0
53 TraesCS2A01G447400 chr6A 82.857 105 18 0 1439 1543 446521694 446521798 9.330000e-16 95.3
54 TraesCS2A01G447400 chr4A 92.212 642 11 8 1 605 598228639 598228000 0.000000e+00 872.0
55 TraesCS2A01G447400 chr7A 92.019 639 13 6 1 602 695865750 695865113 0.000000e+00 863.0
56 TraesCS2A01G447400 chr7A 94.595 333 12 4 1 327 183919108 183919440 7.820000e-141 510.0
57 TraesCS2A01G447400 chr7A 96.347 219 7 1 602 819 63591405 63591187 3.000000e-95 359.0
58 TraesCS2A01G447400 chr7A 95.023 221 11 0 602 822 691539634 691539414 6.490000e-92 348.0
59 TraesCS2A01G447400 chr7A 84.577 201 21 5 2915 3107 49620935 49621133 1.160000e-44 191.0
60 TraesCS2A01G447400 chr7A 86.391 169 21 2 2909 3076 670531509 670531676 1.940000e-42 183.0
61 TraesCS2A01G447400 chr5D 84.567 635 68 18 1 606 445408785 445408152 1.250000e-168 603.0
62 TraesCS2A01G447400 chr5D 81.944 144 18 6 1139 1278 130188129 130188268 7.160000e-22 115.0
63 TraesCS2A01G447400 chr5D 84.524 84 13 0 1473 1556 425077060 425076977 2.020000e-12 84.2
64 TraesCS2A01G447400 chr5D 85.333 75 7 4 1473 1545 200501575 200501647 1.220000e-09 75.0
65 TraesCS2A01G447400 chr5B 84.691 614 78 12 1 602 39714151 39714760 1.620000e-167 599.0
66 TraesCS2A01G447400 chr6B 83.031 607 93 9 1 599 27907546 27908150 2.770000e-150 542.0
67 TraesCS2A01G447400 chr3D 83.444 604 75 10 1 602 594084097 594084677 3.590000e-149 538.0
68 TraesCS2A01G447400 chr3D 94.521 219 11 1 602 819 32372510 32372728 1.400000e-88 337.0
69 TraesCS2A01G447400 chr3D 86.517 89 10 2 1468 1555 360048659 360048572 2.600000e-16 97.1
70 TraesCS2A01G447400 chr3D 88.000 75 9 0 1439 1513 492131789 492131863 4.340000e-14 89.8
71 TraesCS2A01G447400 chr5A 93.472 337 16 4 1 332 43272050 43271715 2.190000e-136 496.0
72 TraesCS2A01G447400 chr5A 97.378 267 7 0 315 581 43271705 43271439 3.720000e-124 455.0
73 TraesCS2A01G447400 chr5A 82.791 215 25 6 2922 3129 291594740 291594531 6.960000e-42 182.0
74 TraesCS2A01G447400 chr7D 88.889 288 32 0 315 602 35299325 35299612 3.880000e-94 355.0
75 TraesCS2A01G447400 chr7D 95.413 218 10 0 602 819 573961525 573961742 6.490000e-92 348.0
76 TraesCS2A01G447400 chr7D 81.949 277 42 6 1000 1275 13029512 13029243 8.820000e-56 228.0
77 TraesCS2A01G447400 chr7D 80.866 277 45 5 1000 1275 13067521 13067252 8.880000e-51 211.0
78 TraesCS2A01G447400 chr7D 83.740 123 17 3 1436 1556 13066902 13066781 2.580000e-21 113.0
79 TraesCS2A01G447400 chr7D 82.787 122 20 1 1436 1556 13029171 13029050 1.200000e-19 108.0
80 TraesCS2A01G447400 chr7D 82.203 118 21 0 1439 1556 13097809 13097692 5.580000e-18 102.0
81 TraesCS2A01G447400 chr1D 94.521 219 12 0 601 819 492587688 492587470 3.910000e-89 339.0
82 TraesCS2A01G447400 chr1D 94.037 218 13 0 602 819 21347142 21347359 6.540000e-87 331.0
83 TraesCS2A01G447400 chr1D 89.720 107 9 2 1108 1213 449674751 449674856 5.500000e-28 135.0
84 TraesCS2A01G447400 chr1D 88.785 107 10 2 1108 1213 449752743 449752848 2.560000e-26 130.0
85 TraesCS2A01G447400 chr1D 85.185 108 14 2 1108 1214 449983329 449983223 3.330000e-20 110.0
86 TraesCS2A01G447400 chr1D 82.727 110 13 6 1439 1545 449660779 449660885 3.360000e-15 93.5
87 TraesCS2A01G447400 chr1D 85.393 89 9 4 1439 1525 449923207 449923121 4.340000e-14 89.8
88 TraesCS2A01G447400 chr1D 84.091 88 12 2 1439 1525 449982994 449982908 2.020000e-12 84.2
89 TraesCS2A01G447400 chr1D 80.909 110 15 6 1439 1545 449753034 449753140 7.270000e-12 82.4
90 TraesCS2A01G447400 chr4D 94.907 216 10 1 605 820 434987621 434987407 1.400000e-88 337.0
91 TraesCS2A01G447400 chr4D 81.588 277 43 6 1000 1275 506607108 506606839 4.100000e-54 222.0
92 TraesCS2A01G447400 chr4D 81.967 122 21 1 1436 1556 506606767 506606646 5.580000e-18 102.0
93 TraesCS2A01G447400 chr4D 89.062 64 7 0 1439 1502 129777068 129777131 2.610000e-11 80.5
94 TraesCS2A01G447400 chr4D 84.127 63 10 0 1439 1501 497126485 497126547 9.470000e-06 62.1
95 TraesCS2A01G447400 chrUn 83.838 198 23 3 2913 3103 30689429 30689234 2.500000e-41 180.0
96 TraesCS2A01G447400 chrUn 90.625 64 6 0 1439 1502 58870308 58870245 5.620000e-13 86.1
97 TraesCS2A01G447400 chr6D 77.536 276 43 14 1001 1271 296993555 296993294 7.060000e-32 148.0
98 TraesCS2A01G447400 chr6D 78.879 232 32 13 1046 1271 298207239 298207019 1.180000e-29 141.0
99 TraesCS2A01G447400 chr6D 80.105 191 27 9 1046 1233 298399280 298399098 7.110000e-27 132.0
100 TraesCS2A01G447400 chr6D 76.173 277 45 15 1001 1271 297407374 297407113 3.310000e-25 126.0
101 TraesCS2A01G447400 chr6D 82.857 105 18 0 1439 1543 309719549 309719653 9.330000e-16 95.3
102 TraesCS2A01G447400 chr6D 86.301 73 8 2 1442 1513 292737747 292737676 9.400000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G447400 chr2A 696306042 696309202 3160 False 5838.000000 5838 100.0000 1 3161 1 chr2A.!!$F2 3160
1 TraesCS2A01G447400 chr2A 696219183 696221052 1869 False 1178.000000 1598 89.3900 966 2921 2 chr2A.!!$F4 1955
2 TraesCS2A01G447400 chr2A 696040416 696041747 1331 False 699.000000 854 86.4610 984 2346 2 chr2A.!!$F3 1362
3 TraesCS2A01G447400 chr2A 695999724 696000437 713 False 453.000000 453 79.5520 1663 2314 1 chr2A.!!$F1 651
4 TraesCS2A01G447400 chr2D 556619001 556620986 1985 False 1321.000000 1592 90.9960 854 2921 2 chr2D.!!$F11 2067
5 TraesCS2A01G447400 chr2D 556365329 556367310 1981 False 1176.500000 1580 87.2255 829 2901 2 chr2D.!!$F9 2072
6 TraesCS2A01G447400 chr2D 556407874 556409293 1419 False 964.000000 987 91.0825 820 2326 2 chr2D.!!$F10 1506
7 TraesCS2A01G447400 chr2D 556350412 556351146 734 False 859.000000 859 87.6320 854 1613 1 chr2D.!!$F2 759
8 TraesCS2A01G447400 chr2D 556333374 556334750 1376 False 762.500000 1031 88.9960 1649 2921 2 chr2D.!!$F7 1272
9 TraesCS2A01G447400 chr2D 556267092 556268532 1440 False 664.500000 889 83.7895 854 2314 2 chr2D.!!$F6 1460
10 TraesCS2A01G447400 chr2D 556318398 556318907 509 False 651.000000 651 89.6420 983 1507 1 chr2D.!!$F1 524
11 TraesCS2A01G447400 chr2D 556642397 556642974 577 False 645.000000 645 87.1190 999 1575 1 chr2D.!!$F3 576
12 TraesCS2A01G447400 chr2D 107845745 107846339 594 True 590.000000 590 84.7040 1 602 1 chr2D.!!$R1 601
13 TraesCS2A01G447400 chr2D 556339260 556340232 972 False 340.500000 372 83.0760 1349 2314 2 chr2D.!!$F8 965
14 TraesCS2A01G447400 chr2B 663885857 663887992 2135 False 799.666667 1090 87.4290 820 2921 3 chr2B.!!$F3 2101
15 TraesCS2A01G447400 chr2B 663828835 663830309 1474 False 655.500000 878 83.4325 854 2346 2 chr2B.!!$F1 1492
16 TraesCS2A01G447400 chr2B 663837840 663839261 1421 False 630.000000 846 83.0680 820 2299 2 chr2B.!!$F2 1479
17 TraesCS2A01G447400 chr3A 736796666 736797281 615 False 941.000000 941 94.6430 1 601 1 chr3A.!!$F4 600
18 TraesCS2A01G447400 chr3A 7346940 7347577 637 False 874.000000 874 92.3320 1 602 1 chr3A.!!$F1 601
19 TraesCS2A01G447400 chr3A 26154436 26155074 638 True 869.000000 869 92.1750 1 602 1 chr3A.!!$R1 601
20 TraesCS2A01G447400 chr3A 747585074 747585712 638 False 841.000000 841 91.3930 1 602 1 chr3A.!!$F5 601
21 TraesCS2A01G447400 chr1A 14362022 14362628 606 True 905.000000 905 93.8110 1 602 1 chr1A.!!$R1 601
22 TraesCS2A01G447400 chr6A 11244492 11245128 636 False 883.000000 883 92.6220 1 602 1 chr6A.!!$F1 601
23 TraesCS2A01G447400 chr6A 412336 412971 635 False 493.000000 494 95.6315 1 602 2 chr6A.!!$F7 601
24 TraesCS2A01G447400 chr4A 598228000 598228639 639 True 872.000000 872 92.2120 1 605 1 chr4A.!!$R1 604
25 TraesCS2A01G447400 chr7A 695865113 695865750 637 True 863.000000 863 92.0190 1 602 1 chr7A.!!$R3 601
26 TraesCS2A01G447400 chr5D 445408152 445408785 633 True 603.000000 603 84.5670 1 606 1 chr5D.!!$R2 605
27 TraesCS2A01G447400 chr5B 39714151 39714760 609 False 599.000000 599 84.6910 1 602 1 chr5B.!!$F1 601
28 TraesCS2A01G447400 chr6B 27907546 27908150 604 False 542.000000 542 83.0310 1 599 1 chr6B.!!$F1 598
29 TraesCS2A01G447400 chr3D 594084097 594084677 580 False 538.000000 538 83.4440 1 602 1 chr3D.!!$F3 601
30 TraesCS2A01G447400 chr5A 43271439 43272050 611 True 475.500000 496 95.4250 1 581 2 chr5A.!!$R2 580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
618 762 0.032952 GTGGGTGCGAGTGTTACTGA 59.967 55.0 0.0 0.0 0.00 3.41 F
681 825 0.100682 CCCTGTCGGTCAGATACGTG 59.899 60.0 0.0 0.0 46.27 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1967 2201 0.949397 CAGTTCAGCTGCTGCAAAGA 59.051 50.000 24.38 9.53 42.74 2.52 R
2351 2756 1.535462 CTTGGATGGTTCTCGCGTTTT 59.465 47.619 5.77 0.00 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 71 7.765307 AGATAAGGCACATTTATGTTGTGAAG 58.235 34.615 7.93 0.00 45.83 3.02
492 636 4.674362 GCATAGATACACATATGCCGACGA 60.674 45.833 1.58 0.00 45.51 4.20
606 750 4.781934 AGATAATTTCTGGTAGTGGGTGC 58.218 43.478 0.00 0.00 31.79 5.01
607 751 1.821216 AATTTCTGGTAGTGGGTGCG 58.179 50.000 0.00 0.00 0.00 5.34
608 752 0.981183 ATTTCTGGTAGTGGGTGCGA 59.019 50.000 0.00 0.00 0.00 5.10
609 753 0.320374 TTTCTGGTAGTGGGTGCGAG 59.680 55.000 0.00 0.00 0.00 5.03
610 754 0.830444 TTCTGGTAGTGGGTGCGAGT 60.830 55.000 0.00 0.00 0.00 4.18
611 755 1.079819 CTGGTAGTGGGTGCGAGTG 60.080 63.158 0.00 0.00 0.00 3.51
612 756 1.816863 CTGGTAGTGGGTGCGAGTGT 61.817 60.000 0.00 0.00 0.00 3.55
613 757 1.370064 GGTAGTGGGTGCGAGTGTT 59.630 57.895 0.00 0.00 0.00 3.32
614 758 0.604578 GGTAGTGGGTGCGAGTGTTA 59.395 55.000 0.00 0.00 0.00 2.41
615 759 1.670967 GGTAGTGGGTGCGAGTGTTAC 60.671 57.143 0.00 0.00 0.00 2.50
616 760 1.271656 GTAGTGGGTGCGAGTGTTACT 59.728 52.381 0.00 0.00 0.00 2.24
617 761 0.033504 AGTGGGTGCGAGTGTTACTG 59.966 55.000 0.00 0.00 0.00 2.74
618 762 0.032952 GTGGGTGCGAGTGTTACTGA 59.967 55.000 0.00 0.00 0.00 3.41
619 763 0.317160 TGGGTGCGAGTGTTACTGAG 59.683 55.000 0.00 0.00 0.00 3.35
620 764 1.014564 GGGTGCGAGTGTTACTGAGC 61.015 60.000 0.00 0.00 0.00 4.26
621 765 1.344942 GGTGCGAGTGTTACTGAGCG 61.345 60.000 0.00 0.00 33.06 5.03
622 766 1.080772 TGCGAGTGTTACTGAGCGG 60.081 57.895 0.00 0.00 33.06 5.52
623 767 1.805945 GCGAGTGTTACTGAGCGGG 60.806 63.158 0.00 0.00 0.00 6.13
624 768 1.585006 CGAGTGTTACTGAGCGGGT 59.415 57.895 0.00 0.00 0.00 5.28
625 769 0.732880 CGAGTGTTACTGAGCGGGTG 60.733 60.000 0.00 0.00 0.00 4.61
626 770 1.004918 AGTGTTACTGAGCGGGTGC 60.005 57.895 0.00 0.00 43.24 5.01
640 784 4.715523 GTGCGCTTGGGTAGGCCA 62.716 66.667 9.73 0.00 36.17 5.36
641 785 4.715523 TGCGCTTGGGTAGGCCAC 62.716 66.667 9.73 0.31 36.17 5.01
655 799 4.248842 CCACCGTGGCACCTGACA 62.249 66.667 12.86 0.00 0.00 3.58
656 800 2.203139 CACCGTGGCACCTGACAA 60.203 61.111 12.86 0.00 32.99 3.18
657 801 2.111043 ACCGTGGCACCTGACAAG 59.889 61.111 12.86 0.00 32.99 3.16
658 802 2.111043 CCGTGGCACCTGACAAGT 59.889 61.111 12.86 0.00 32.99 3.16
659 803 2.253758 CCGTGGCACCTGACAAGTG 61.254 63.158 12.86 0.00 32.99 3.16
660 804 2.253758 CGTGGCACCTGACAAGTGG 61.254 63.158 12.86 0.00 32.99 4.00
661 805 1.898574 GTGGCACCTGACAAGTGGG 60.899 63.158 6.29 0.00 32.99 4.61
662 806 2.985847 GGCACCTGACAAGTGGGC 60.986 66.667 6.33 0.00 35.71 5.36
663 807 2.985847 GCACCTGACAAGTGGGCC 60.986 66.667 6.33 0.00 35.71 5.80
664 808 2.282462 CACCTGACAAGTGGGCCC 60.282 66.667 17.59 17.59 0.00 5.80
665 809 2.450502 ACCTGACAAGTGGGCCCT 60.451 61.111 25.70 0.15 0.00 5.19
666 810 2.034687 CCTGACAAGTGGGCCCTG 59.965 66.667 25.70 16.21 0.00 4.45
667 811 2.833913 CCTGACAAGTGGGCCCTGT 61.834 63.158 25.70 19.84 0.00 4.00
668 812 1.302832 CTGACAAGTGGGCCCTGTC 60.303 63.158 27.88 27.88 0.00 3.51
669 813 2.358737 GACAAGTGGGCCCTGTCG 60.359 66.667 25.70 11.86 0.00 4.35
670 814 3.901797 GACAAGTGGGCCCTGTCGG 62.902 68.421 25.70 11.35 0.00 4.79
671 815 3.953775 CAAGTGGGCCCTGTCGGT 61.954 66.667 25.70 4.63 0.00 4.69
672 816 3.637273 AAGTGGGCCCTGTCGGTC 61.637 66.667 25.70 4.64 34.35 4.79
673 817 4.954118 AGTGGGCCCTGTCGGTCA 62.954 66.667 25.70 0.00 38.37 4.02
674 818 4.394712 GTGGGCCCTGTCGGTCAG 62.395 72.222 25.70 0.00 38.37 3.51
675 819 4.631740 TGGGCCCTGTCGGTCAGA 62.632 66.667 25.70 0.00 46.27 3.27
676 820 3.083997 GGGCCCTGTCGGTCAGAT 61.084 66.667 17.04 0.00 46.27 2.90
677 821 1.760875 GGGCCCTGTCGGTCAGATA 60.761 63.158 17.04 0.00 46.27 1.98
678 822 1.442148 GGCCCTGTCGGTCAGATAC 59.558 63.158 3.76 0.00 46.27 2.24
679 823 1.065928 GCCCTGTCGGTCAGATACG 59.934 63.158 3.76 0.00 46.27 3.06
680 824 1.664321 GCCCTGTCGGTCAGATACGT 61.664 60.000 3.76 0.00 46.27 3.57
681 825 0.100682 CCCTGTCGGTCAGATACGTG 59.899 60.000 0.00 0.00 46.27 4.49
682 826 0.525668 CCTGTCGGTCAGATACGTGC 60.526 60.000 0.00 0.00 46.27 5.34
683 827 0.452184 CTGTCGGTCAGATACGTGCT 59.548 55.000 0.00 0.00 46.27 4.40
684 828 0.450583 TGTCGGTCAGATACGTGCTC 59.549 55.000 0.00 0.00 0.00 4.26
685 829 0.450583 GTCGGTCAGATACGTGCTCA 59.549 55.000 0.00 0.00 0.00 4.26
686 830 1.135489 GTCGGTCAGATACGTGCTCAA 60.135 52.381 0.00 0.00 0.00 3.02
687 831 1.749063 TCGGTCAGATACGTGCTCAAT 59.251 47.619 0.00 0.00 0.00 2.57
688 832 2.946990 TCGGTCAGATACGTGCTCAATA 59.053 45.455 0.00 0.00 0.00 1.90
689 833 3.043586 CGGTCAGATACGTGCTCAATAC 58.956 50.000 0.00 0.00 0.00 1.89
690 834 3.043586 GGTCAGATACGTGCTCAATACG 58.956 50.000 0.00 0.00 46.31 3.06
691 835 3.242969 GGTCAGATACGTGCTCAATACGA 60.243 47.826 0.00 0.00 43.82 3.43
692 836 3.969352 GTCAGATACGTGCTCAATACGAG 59.031 47.826 0.00 0.00 43.82 4.18
703 847 4.162096 CTCAATACGAGCTTATACGGCT 57.838 45.455 0.00 0.00 43.26 5.52
704 848 3.897325 TCAATACGAGCTTATACGGCTG 58.103 45.455 4.36 0.00 40.40 4.85
705 849 3.317149 TCAATACGAGCTTATACGGCTGT 59.683 43.478 2.42 2.42 40.40 4.40
706 850 3.555917 ATACGAGCTTATACGGCTGTC 57.444 47.619 0.00 0.00 40.40 3.51
707 851 1.100510 ACGAGCTTATACGGCTGTCA 58.899 50.000 0.00 0.00 40.40 3.58
708 852 1.065701 ACGAGCTTATACGGCTGTCAG 59.934 52.381 0.00 0.00 40.40 3.51
709 853 1.333931 CGAGCTTATACGGCTGTCAGA 59.666 52.381 0.00 0.00 40.40 3.27
710 854 2.733517 GAGCTTATACGGCTGTCAGAC 58.266 52.381 0.00 0.00 40.40 3.51
711 855 1.409427 AGCTTATACGGCTGTCAGACC 59.591 52.381 0.00 3.66 38.73 3.85
716 860 4.043168 CGGCTGTCAGACCGTTTT 57.957 55.556 20.80 0.00 44.46 2.43
717 861 1.569493 CGGCTGTCAGACCGTTTTG 59.431 57.895 20.80 0.00 44.46 2.44
718 862 1.282875 GGCTGTCAGACCGTTTTGC 59.717 57.895 3.32 0.00 0.00 3.68
719 863 1.444119 GGCTGTCAGACCGTTTTGCA 61.444 55.000 3.32 0.00 0.00 4.08
720 864 0.380378 GCTGTCAGACCGTTTTGCAA 59.620 50.000 3.32 0.00 0.00 4.08
721 865 1.859998 GCTGTCAGACCGTTTTGCAAC 60.860 52.381 3.32 0.00 0.00 4.17
722 866 1.400142 CTGTCAGACCGTTTTGCAACA 59.600 47.619 0.00 0.00 32.54 3.33
723 867 1.131504 TGTCAGACCGTTTTGCAACAC 59.868 47.619 5.63 5.63 32.54 3.32
724 868 1.400494 GTCAGACCGTTTTGCAACACT 59.600 47.619 13.50 0.00 32.54 3.55
725 869 2.088423 TCAGACCGTTTTGCAACACTT 58.912 42.857 13.50 0.67 32.54 3.16
726 870 3.064271 GTCAGACCGTTTTGCAACACTTA 59.936 43.478 13.50 0.00 32.54 2.24
727 871 3.311322 TCAGACCGTTTTGCAACACTTAG 59.689 43.478 13.50 5.21 32.54 2.18
728 872 2.616842 AGACCGTTTTGCAACACTTAGG 59.383 45.455 13.50 9.79 32.54 2.69
729 873 1.066454 ACCGTTTTGCAACACTTAGGC 59.934 47.619 13.50 0.00 32.54 3.93
730 874 1.336755 CCGTTTTGCAACACTTAGGCT 59.663 47.619 13.50 0.00 32.54 4.58
731 875 2.223711 CCGTTTTGCAACACTTAGGCTT 60.224 45.455 13.50 0.00 32.54 4.35
732 876 3.003897 CCGTTTTGCAACACTTAGGCTTA 59.996 43.478 13.50 0.00 32.54 3.09
733 877 4.219033 CGTTTTGCAACACTTAGGCTTAG 58.781 43.478 13.50 0.00 32.54 2.18
734 878 4.024387 CGTTTTGCAACACTTAGGCTTAGA 60.024 41.667 13.50 0.00 32.54 2.10
735 879 5.452777 GTTTTGCAACACTTAGGCTTAGAG 58.547 41.667 7.64 1.65 32.54 2.43
736 880 4.351874 TTGCAACACTTAGGCTTAGAGT 57.648 40.909 7.64 2.36 0.00 3.24
737 881 4.351874 TGCAACACTTAGGCTTAGAGTT 57.648 40.909 7.64 8.95 0.00 3.01
738 882 4.065088 TGCAACACTTAGGCTTAGAGTTG 58.935 43.478 27.91 27.91 42.97 3.16
739 883 3.437049 GCAACACTTAGGCTTAGAGTTGG 59.563 47.826 30.64 19.27 41.49 3.77
740 884 3.336138 ACACTTAGGCTTAGAGTTGGC 57.664 47.619 7.64 0.00 0.00 4.52
741 885 2.637872 ACACTTAGGCTTAGAGTTGGCA 59.362 45.455 7.64 0.00 0.00 4.92
742 886 3.003480 CACTTAGGCTTAGAGTTGGCAC 58.997 50.000 7.64 0.00 0.00 5.01
743 887 2.907042 ACTTAGGCTTAGAGTTGGCACT 59.093 45.455 7.64 0.00 35.17 4.40
744 888 3.265791 CTTAGGCTTAGAGTTGGCACTG 58.734 50.000 0.00 0.00 31.22 3.66
745 889 0.322008 AGGCTTAGAGTTGGCACTGC 60.322 55.000 0.00 0.00 31.22 4.40
746 890 0.606401 GGCTTAGAGTTGGCACTGCA 60.606 55.000 2.82 0.00 31.22 4.41
747 891 1.457346 GCTTAGAGTTGGCACTGCAT 58.543 50.000 2.82 0.00 31.22 3.96
748 892 1.131883 GCTTAGAGTTGGCACTGCATG 59.868 52.381 2.82 0.00 31.22 4.06
749 893 1.741706 CTTAGAGTTGGCACTGCATGG 59.258 52.381 2.82 0.00 31.22 3.66
777 921 7.596749 AAAAATGACTAGTGGTACTGATTCG 57.403 36.000 0.00 0.00 0.00 3.34
778 922 5.916661 AATGACTAGTGGTACTGATTCGT 57.083 39.130 0.00 0.00 0.00 3.85
779 923 4.959596 TGACTAGTGGTACTGATTCGTC 57.040 45.455 0.00 0.00 0.00 4.20
780 924 4.329392 TGACTAGTGGTACTGATTCGTCA 58.671 43.478 0.00 0.00 0.00 4.35
781 925 4.155462 TGACTAGTGGTACTGATTCGTCAC 59.845 45.833 0.00 0.00 0.00 3.67
782 926 4.077108 ACTAGTGGTACTGATTCGTCACA 58.923 43.478 0.00 0.00 0.00 3.58
783 927 4.521639 ACTAGTGGTACTGATTCGTCACAA 59.478 41.667 0.00 0.00 0.00 3.33
784 928 3.650139 AGTGGTACTGATTCGTCACAAC 58.350 45.455 0.00 0.00 0.00 3.32
795 939 1.662360 CGTCACAACGTGCTGAAATG 58.338 50.000 0.00 0.00 43.94 2.32
796 940 1.003972 CGTCACAACGTGCTGAAATGT 60.004 47.619 0.00 0.00 43.94 2.71
797 941 2.375110 GTCACAACGTGCTGAAATGTG 58.625 47.619 7.76 7.76 42.01 3.21
798 942 1.333308 TCACAACGTGCTGAAATGTGG 59.667 47.619 12.83 0.00 41.23 4.17
799 943 1.065401 CACAACGTGCTGAAATGTGGT 59.935 47.619 6.42 0.00 38.13 4.16
800 944 2.289274 CACAACGTGCTGAAATGTGGTA 59.711 45.455 6.42 0.00 38.13 3.25
801 945 2.548057 ACAACGTGCTGAAATGTGGTAG 59.452 45.455 0.00 0.00 0.00 3.18
802 946 2.543777 ACGTGCTGAAATGTGGTAGT 57.456 45.000 0.00 0.00 0.00 2.73
803 947 2.143122 ACGTGCTGAAATGTGGTAGTG 58.857 47.619 0.00 0.00 0.00 2.74
804 948 2.143122 CGTGCTGAAATGTGGTAGTGT 58.857 47.619 0.00 0.00 0.00 3.55
805 949 2.157668 CGTGCTGAAATGTGGTAGTGTC 59.842 50.000 0.00 0.00 0.00 3.67
806 950 3.403038 GTGCTGAAATGTGGTAGTGTCT 58.597 45.455 0.00 0.00 0.00 3.41
807 951 3.815401 GTGCTGAAATGTGGTAGTGTCTT 59.185 43.478 0.00 0.00 0.00 3.01
808 952 3.814842 TGCTGAAATGTGGTAGTGTCTTG 59.185 43.478 0.00 0.00 0.00 3.02
809 953 3.365364 GCTGAAATGTGGTAGTGTCTTGC 60.365 47.826 0.00 0.00 0.00 4.01
810 954 3.814625 TGAAATGTGGTAGTGTCTTGCA 58.185 40.909 0.00 0.00 0.00 4.08
811 955 4.203226 TGAAATGTGGTAGTGTCTTGCAA 58.797 39.130 0.00 0.00 0.00 4.08
812 956 4.826733 TGAAATGTGGTAGTGTCTTGCAAT 59.173 37.500 0.00 0.00 0.00 3.56
813 957 5.301551 TGAAATGTGGTAGTGTCTTGCAATT 59.698 36.000 0.00 0.00 0.00 2.32
814 958 6.488344 TGAAATGTGGTAGTGTCTTGCAATTA 59.512 34.615 0.00 0.00 0.00 1.40
815 959 6.892658 AATGTGGTAGTGTCTTGCAATTAA 57.107 33.333 0.00 0.00 0.00 1.40
816 960 5.682943 TGTGGTAGTGTCTTGCAATTAAC 57.317 39.130 0.00 0.00 0.00 2.01
817 961 5.373222 TGTGGTAGTGTCTTGCAATTAACT 58.627 37.500 0.00 6.44 0.00 2.24
818 962 5.468746 TGTGGTAGTGTCTTGCAATTAACTC 59.531 40.000 0.00 0.37 0.00 3.01
823 967 7.764443 GGTAGTGTCTTGCAATTAACTCATCTA 59.236 37.037 0.00 0.26 0.00 1.98
824 968 7.602517 AGTGTCTTGCAATTAACTCATCTAC 57.397 36.000 0.00 0.00 0.00 2.59
832 976 5.822519 GCAATTAACTCATCTACCATGGACA 59.177 40.000 21.47 4.53 0.00 4.02
870 1014 5.163499 GGCTGTGTCCTCTATATATACCTGC 60.163 48.000 0.00 0.00 0.00 4.85
945 1093 0.807667 CGATCACAGCCACCAGTAGC 60.808 60.000 0.00 0.00 0.00 3.58
951 1099 1.685765 AGCCACCAGTAGCCGATCA 60.686 57.895 0.00 0.00 0.00 2.92
952 1100 1.521681 GCCACCAGTAGCCGATCAC 60.522 63.158 0.00 0.00 0.00 3.06
953 1101 1.144057 CCACCAGTAGCCGATCACC 59.856 63.158 0.00 0.00 0.00 4.02
954 1102 1.613317 CCACCAGTAGCCGATCACCA 61.613 60.000 0.00 0.00 0.00 4.17
955 1103 0.179100 CACCAGTAGCCGATCACCAG 60.179 60.000 0.00 0.00 0.00 4.00
956 1104 1.227380 CCAGTAGCCGATCACCAGC 60.227 63.158 0.00 0.00 0.00 4.85
957 1105 1.227380 CAGTAGCCGATCACCAGCC 60.227 63.158 0.00 0.00 0.00 4.85
959 1107 1.050988 AGTAGCCGATCACCAGCCAT 61.051 55.000 0.00 0.00 0.00 4.40
960 1108 0.679505 GTAGCCGATCACCAGCCATA 59.320 55.000 0.00 0.00 0.00 2.74
961 1109 1.276421 GTAGCCGATCACCAGCCATAT 59.724 52.381 0.00 0.00 0.00 1.78
962 1110 0.322975 AGCCGATCACCAGCCATATC 59.677 55.000 0.00 0.00 0.00 1.63
963 1111 1.016130 GCCGATCACCAGCCATATCG 61.016 60.000 0.00 0.00 40.60 2.92
964 1112 3.128259 CGATCACCAGCCATATCGG 57.872 57.895 0.00 0.00 38.01 4.18
1078 1237 2.604686 AGGAGGACAAGGCGCTGA 60.605 61.111 7.64 0.00 0.00 4.26
1215 1374 2.793946 GACATCAAGCGCGGCAAT 59.206 55.556 8.83 0.00 0.00 3.56
1239 1398 2.876645 GACGACGAAGAGCGCCTG 60.877 66.667 2.29 0.00 46.04 4.85
1389 1579 5.849357 TTGCCATAGTTGTTACGTACTTG 57.151 39.130 0.00 0.00 0.00 3.16
1464 1663 4.831307 ACGATCGCGACGCACCTC 62.831 66.667 24.04 11.48 41.64 3.85
1525 1724 1.300971 GCACATCCGCAAGAAGCTCA 61.301 55.000 0.00 0.00 42.61 4.26
1605 1804 1.450312 CCTCAACGCCACCTCCATC 60.450 63.158 0.00 0.00 0.00 3.51
1613 1812 3.402681 CACCTCCATCGCCCACCT 61.403 66.667 0.00 0.00 0.00 4.00
1614 1813 3.083997 ACCTCCATCGCCCACCTC 61.084 66.667 0.00 0.00 0.00 3.85
1615 1814 3.083349 CCTCCATCGCCCACCTCA 61.083 66.667 0.00 0.00 0.00 3.86
1616 1815 2.669133 CCTCCATCGCCCACCTCAA 61.669 63.158 0.00 0.00 0.00 3.02
1617 1816 1.450312 CTCCATCGCCCACCTCAAC 60.450 63.158 0.00 0.00 0.00 3.18
1618 1817 2.819595 CCATCGCCCACCTCAACG 60.820 66.667 0.00 0.00 0.00 4.10
1619 1818 2.047274 CATCGCCCACCTCAACGT 60.047 61.111 0.00 0.00 0.00 3.99
1620 1819 2.100631 CATCGCCCACCTCAACGTC 61.101 63.158 0.00 0.00 0.00 4.34
1621 1820 2.579657 ATCGCCCACCTCAACGTCA 61.580 57.895 0.00 0.00 0.00 4.35
1622 1821 2.781595 ATCGCCCACCTCAACGTCAC 62.782 60.000 0.00 0.00 0.00 3.67
1623 1822 2.668550 GCCCACCTCAACGTCACC 60.669 66.667 0.00 0.00 0.00 4.02
1624 1823 2.032071 CCCACCTCAACGTCACCC 59.968 66.667 0.00 0.00 0.00 4.61
1625 1824 2.813726 CCCACCTCAACGTCACCCA 61.814 63.158 0.00 0.00 0.00 4.51
1626 1825 1.597027 CCACCTCAACGTCACCCAC 60.597 63.158 0.00 0.00 0.00 4.61
1627 1826 1.597027 CACCTCAACGTCACCCACC 60.597 63.158 0.00 0.00 0.00 4.61
1628 1827 2.067605 ACCTCAACGTCACCCACCA 61.068 57.895 0.00 0.00 0.00 4.17
1629 1828 1.301716 CCTCAACGTCACCCACCAG 60.302 63.158 0.00 0.00 0.00 4.00
1630 1829 1.961277 CTCAACGTCACCCACCAGC 60.961 63.158 0.00 0.00 0.00 4.85
1631 1830 2.203139 CAACGTCACCCACCAGCA 60.203 61.111 0.00 0.00 0.00 4.41
1632 1831 2.111043 AACGTCACCCACCAGCAG 59.889 61.111 0.00 0.00 0.00 4.24
1633 1832 2.439960 AACGTCACCCACCAGCAGA 61.440 57.895 0.00 0.00 0.00 4.26
1634 1833 1.768684 AACGTCACCCACCAGCAGAT 61.769 55.000 0.00 0.00 0.00 2.90
1635 1834 1.742880 CGTCACCCACCAGCAGATG 60.743 63.158 0.00 0.00 0.00 2.90
1636 1835 2.042831 GTCACCCACCAGCAGATGC 61.043 63.158 0.00 0.00 42.49 3.91
1637 1836 2.753043 CACCCACCAGCAGATGCC 60.753 66.667 0.14 0.00 43.38 4.40
1638 1837 4.415150 ACCCACCAGCAGATGCCG 62.415 66.667 0.14 0.00 43.38 5.69
1848 2062 0.179037 TGCTCAACTCAAGCAGCAGT 60.179 50.000 0.00 0.00 44.51 4.40
1856 2070 1.585668 CTCAAGCAGCAGTATCGTTCG 59.414 52.381 0.00 0.00 0.00 3.95
1967 2201 3.701454 GTCTCCAGGGACGAGCTT 58.299 61.111 0.00 0.00 0.00 3.74
1985 2219 1.607628 CTTCTTTGCAGCAGCTGAACT 59.392 47.619 27.39 2.30 42.74 3.01
2055 2416 4.980805 GACTGGTCACCGGCGCAA 62.981 66.667 10.83 0.00 32.02 4.85
2117 2478 1.536073 TTGTGCTCTCTCGAGGGTGG 61.536 60.000 13.10 7.89 37.75 4.61
2120 2481 3.074999 GCTCTCTCGAGGGTGGCTG 62.075 68.421 13.10 0.30 37.75 4.85
2256 2655 2.616376 TGTGTTCATTGTGGTTCTTCCG 59.384 45.455 0.00 0.00 39.52 4.30
2351 2756 1.674359 AACATGTTGCCACTCGACAA 58.326 45.000 11.07 0.00 42.10 3.18
2387 2792 6.378280 ACCATCCAAGTAAAATGAGATTCCAC 59.622 38.462 0.00 0.00 0.00 4.02
2394 2799 9.994432 CAAGTAAAATGAGATTCCACATAACTC 57.006 33.333 0.00 0.00 0.00 3.01
2421 2826 0.319727 TTCGTCGCAATAACGGTGGT 60.320 50.000 0.00 0.00 40.45 4.16
2468 2889 4.311520 TGGGCCTTAGCGATAGATACTA 57.688 45.455 4.53 0.00 41.24 1.82
2493 2914 8.871629 ACAATGGAATGTTATACTGGTTTACA 57.128 30.769 0.00 0.00 0.00 2.41
2531 2954 5.107951 GCTAATACGAACGAACCTAAGATGC 60.108 44.000 0.14 0.00 0.00 3.91
2535 3073 1.659098 GAACGAACCTAAGATGCACGG 59.341 52.381 0.00 0.00 0.00 4.94
2557 3095 6.040054 ACGGGTTAAAAAGCTGAGTACATTTT 59.960 34.615 4.78 0.00 38.60 1.82
2662 3201 2.241685 AGAGGATGCAAATTCTGAGGCT 59.758 45.455 0.00 0.00 0.00 4.58
2685 3224 2.556622 ACTTGCCGAAACCCTACATTTG 59.443 45.455 0.00 0.00 0.00 2.32
2700 3244 9.030452 ACCCTACATTTGCTCAAACATATTTAA 57.970 29.630 0.00 0.00 32.51 1.52
2803 3350 9.323985 CACCTTTTGTTTCTGGATTAAAATTGA 57.676 29.630 0.00 0.00 0.00 2.57
2826 3379 5.779241 TTCAAGATGATTTACCCCTGACT 57.221 39.130 0.00 0.00 0.00 3.41
2841 3395 6.860034 ACCCCTGACTTAGTTTCCTAAAAAT 58.140 36.000 0.00 0.00 32.86 1.82
2845 3399 8.638873 CCCTGACTTAGTTTCCTAAAAATGTTT 58.361 33.333 0.00 0.00 32.86 2.83
2856 3410 6.500041 TCCTAAAAATGTTTCACTTGGAACG 58.500 36.000 0.00 0.00 34.56 3.95
2913 3467 3.229276 CCAGATTTGGCGCAAACAATA 57.771 42.857 10.83 0.00 37.73 1.90
2916 3470 4.268405 CCAGATTTGGCGCAAACAATATTC 59.732 41.667 10.83 2.76 37.73 1.75
2921 3475 6.639671 TTTGGCGCAAACAATATTCAATAC 57.360 33.333 10.83 0.00 0.00 1.89
2922 3476 5.316327 TGGCGCAAACAATATTCAATACA 57.684 34.783 10.83 0.00 0.00 2.29
2923 3477 5.339177 TGGCGCAAACAATATTCAATACAG 58.661 37.500 10.83 0.00 0.00 2.74
2924 3478 5.105957 TGGCGCAAACAATATTCAATACAGT 60.106 36.000 10.83 0.00 0.00 3.55
2925 3479 5.804979 GGCGCAAACAATATTCAATACAGTT 59.195 36.000 10.83 0.00 0.00 3.16
2926 3480 6.310224 GGCGCAAACAATATTCAATACAGTTT 59.690 34.615 10.83 4.10 0.00 2.66
2927 3481 7.148656 GGCGCAAACAATATTCAATACAGTTTT 60.149 33.333 10.83 0.00 0.00 2.43
2928 3482 7.683676 GCGCAAACAATATTCAATACAGTTTTG 59.316 33.333 0.30 0.00 0.00 2.44
2929 3483 7.683676 CGCAAACAATATTCAATACAGTTTTGC 59.316 33.333 13.09 13.09 0.00 3.68
2930 3484 8.711457 GCAAACAATATTCAATACAGTTTTGCT 58.289 29.630 14.64 0.00 0.00 3.91
2962 3516 8.822652 CATCTAGATGTGTCATAAGTAATGCA 57.177 34.615 22.42 0.00 33.49 3.96
2963 3517 8.706936 CATCTAGATGTGTCATAAGTAATGCAC 58.293 37.037 22.42 0.00 40.27 4.57
2964 3518 7.781056 TCTAGATGTGTCATAAGTAATGCACA 58.219 34.615 13.56 13.56 46.67 4.57
2970 3524 8.424274 TGTGTCATAAGTAATGCACATCTAAG 57.576 34.615 0.00 0.00 42.46 2.18
2971 3525 8.040727 TGTGTCATAAGTAATGCACATCTAAGT 58.959 33.333 0.00 0.00 42.46 2.24
2972 3526 8.883731 GTGTCATAAGTAATGCACATCTAAGTT 58.116 33.333 0.00 0.00 39.93 2.66
2973 3527 9.098355 TGTCATAAGTAATGCACATCTAAGTTC 57.902 33.333 0.00 0.00 35.38 3.01
2974 3528 9.319143 GTCATAAGTAATGCACATCTAAGTTCT 57.681 33.333 0.00 0.00 35.38 3.01
2978 3532 7.721286 AGTAATGCACATCTAAGTTCTATGC 57.279 36.000 0.00 0.00 0.00 3.14
2979 3533 6.708054 AGTAATGCACATCTAAGTTCTATGCC 59.292 38.462 0.00 0.00 0.00 4.40
2980 3534 4.486125 TGCACATCTAAGTTCTATGCCA 57.514 40.909 0.00 0.00 0.00 4.92
2981 3535 5.039920 TGCACATCTAAGTTCTATGCCAT 57.960 39.130 0.00 0.00 0.00 4.40
2982 3536 5.439721 TGCACATCTAAGTTCTATGCCATT 58.560 37.500 0.00 0.00 0.00 3.16
2983 3537 6.591001 TGCACATCTAAGTTCTATGCCATTA 58.409 36.000 0.00 0.00 0.00 1.90
2984 3538 7.053498 TGCACATCTAAGTTCTATGCCATTAA 58.947 34.615 0.00 0.00 0.00 1.40
2985 3539 7.720957 TGCACATCTAAGTTCTATGCCATTAAT 59.279 33.333 0.00 0.00 0.00 1.40
2986 3540 8.233190 GCACATCTAAGTTCTATGCCATTAATC 58.767 37.037 0.00 0.00 0.00 1.75
2987 3541 9.499479 CACATCTAAGTTCTATGCCATTAATCT 57.501 33.333 0.00 0.00 0.00 2.40
2991 3545 9.692749 TCTAAGTTCTATGCCATTAATCTTACG 57.307 33.333 0.00 0.00 0.00 3.18
2992 3546 9.477484 CTAAGTTCTATGCCATTAATCTTACGT 57.523 33.333 0.00 0.00 0.00 3.57
2993 3547 7.715265 AGTTCTATGCCATTAATCTTACGTG 57.285 36.000 0.00 0.00 0.00 4.49
2994 3548 6.706270 AGTTCTATGCCATTAATCTTACGTGG 59.294 38.462 0.00 0.00 0.00 4.94
2995 3549 6.413783 TCTATGCCATTAATCTTACGTGGA 57.586 37.500 0.00 0.00 31.59 4.02
2996 3550 6.455647 TCTATGCCATTAATCTTACGTGGAG 58.544 40.000 0.00 0.00 31.59 3.86
2997 3551 4.746535 TGCCATTAATCTTACGTGGAGA 57.253 40.909 0.00 1.57 31.59 3.71
2998 3552 5.290493 TGCCATTAATCTTACGTGGAGAT 57.710 39.130 9.65 9.65 35.43 2.75
2999 3553 5.680619 TGCCATTAATCTTACGTGGAGATT 58.319 37.500 23.61 23.61 43.99 2.40
3000 3554 5.758296 TGCCATTAATCTTACGTGGAGATTC 59.242 40.000 23.74 14.26 41.59 2.52
3001 3555 5.179555 GCCATTAATCTTACGTGGAGATTCC 59.820 44.000 23.74 10.93 41.59 3.01
3002 3556 6.525629 CCATTAATCTTACGTGGAGATTCCT 58.474 40.000 23.74 14.18 41.59 3.36
3003 3557 6.425114 CCATTAATCTTACGTGGAGATTCCTG 59.575 42.308 23.74 20.87 41.59 3.86
3004 3558 6.540438 TTAATCTTACGTGGAGATTCCTGT 57.460 37.500 23.74 9.77 41.59 4.00
3005 3559 3.868757 TCTTACGTGGAGATTCCTGTG 57.131 47.619 0.00 0.00 37.46 3.66
3006 3560 2.496070 TCTTACGTGGAGATTCCTGTGG 59.504 50.000 0.00 0.00 37.46 4.17
3007 3561 1.191535 TACGTGGAGATTCCTGTGGG 58.808 55.000 0.00 0.00 37.46 4.61
3008 3562 0.836400 ACGTGGAGATTCCTGTGGGT 60.836 55.000 0.00 0.00 37.46 4.51
3009 3563 1.191535 CGTGGAGATTCCTGTGGGTA 58.808 55.000 0.00 0.00 37.46 3.69
3010 3564 1.762957 CGTGGAGATTCCTGTGGGTAT 59.237 52.381 0.00 0.00 37.46 2.73
3011 3565 2.170607 CGTGGAGATTCCTGTGGGTATT 59.829 50.000 0.00 0.00 37.46 1.89
3012 3566 3.370527 CGTGGAGATTCCTGTGGGTATTT 60.371 47.826 0.00 0.00 37.46 1.40
3013 3567 4.200092 GTGGAGATTCCTGTGGGTATTTC 58.800 47.826 0.00 0.00 37.46 2.17
3014 3568 3.202151 TGGAGATTCCTGTGGGTATTTCC 59.798 47.826 4.91 4.91 41.16 3.13
3015 3569 3.459969 GGAGATTCCTGTGGGTATTTCCT 59.540 47.826 0.00 0.00 39.19 3.36
3016 3570 4.079730 GGAGATTCCTGTGGGTATTTCCTT 60.080 45.833 0.00 0.00 39.19 3.36
3017 3571 5.510430 GAGATTCCTGTGGGTATTTCCTTT 58.490 41.667 0.00 0.00 36.25 3.11
3018 3572 5.903923 AGATTCCTGTGGGTATTTCCTTTT 58.096 37.500 0.00 0.00 36.25 2.27
3019 3573 6.322931 AGATTCCTGTGGGTATTTCCTTTTT 58.677 36.000 0.00 0.00 36.25 1.94
3020 3574 6.437477 AGATTCCTGTGGGTATTTCCTTTTTC 59.563 38.462 0.00 0.00 36.25 2.29
3021 3575 4.412843 TCCTGTGGGTATTTCCTTTTTCC 58.587 43.478 0.00 0.00 36.25 3.13
3022 3576 3.513912 CCTGTGGGTATTTCCTTTTTCCC 59.486 47.826 0.00 0.00 36.25 3.97
3023 3577 3.512496 TGTGGGTATTTCCTTTTTCCCC 58.488 45.455 0.00 0.00 34.54 4.81
3024 3578 2.494471 GTGGGTATTTCCTTTTTCCCCG 59.506 50.000 0.00 0.00 34.54 5.73
3025 3579 2.110365 TGGGTATTTCCTTTTTCCCCGT 59.890 45.455 0.00 0.00 34.54 5.28
3026 3580 3.167485 GGGTATTTCCTTTTTCCCCGTT 58.833 45.455 0.00 0.00 36.25 4.44
3027 3581 3.579586 GGGTATTTCCTTTTTCCCCGTTT 59.420 43.478 0.00 0.00 36.25 3.60
3028 3582 4.322198 GGGTATTTCCTTTTTCCCCGTTTC 60.322 45.833 0.00 0.00 36.25 2.78
3029 3583 4.525487 GGTATTTCCTTTTTCCCCGTTTCT 59.475 41.667 0.00 0.00 0.00 2.52
3030 3584 5.011329 GGTATTTCCTTTTTCCCCGTTTCTT 59.989 40.000 0.00 0.00 0.00 2.52
3031 3585 5.623956 ATTTCCTTTTTCCCCGTTTCTTT 57.376 34.783 0.00 0.00 0.00 2.52
3032 3586 5.423704 TTTCCTTTTTCCCCGTTTCTTTT 57.576 34.783 0.00 0.00 0.00 2.27
3033 3587 4.659111 TCCTTTTTCCCCGTTTCTTTTC 57.341 40.909 0.00 0.00 0.00 2.29
3034 3588 4.283337 TCCTTTTTCCCCGTTTCTTTTCT 58.717 39.130 0.00 0.00 0.00 2.52
3035 3589 4.712829 TCCTTTTTCCCCGTTTCTTTTCTT 59.287 37.500 0.00 0.00 0.00 2.52
3036 3590 5.188163 TCCTTTTTCCCCGTTTCTTTTCTTT 59.812 36.000 0.00 0.00 0.00 2.52
3037 3591 5.878116 CCTTTTTCCCCGTTTCTTTTCTTTT 59.122 36.000 0.00 0.00 0.00 2.27
3038 3592 6.373216 CCTTTTTCCCCGTTTCTTTTCTTTTT 59.627 34.615 0.00 0.00 0.00 1.94
3039 3593 7.549842 CCTTTTTCCCCGTTTCTTTTCTTTTTA 59.450 33.333 0.00 0.00 0.00 1.52
3040 3594 9.104965 CTTTTTCCCCGTTTCTTTTCTTTTTAT 57.895 29.630 0.00 0.00 0.00 1.40
3042 3596 9.531942 TTTTCCCCGTTTCTTTTCTTTTTATAC 57.468 29.630 0.00 0.00 0.00 1.47
3043 3597 8.467963 TTCCCCGTTTCTTTTCTTTTTATACT 57.532 30.769 0.00 0.00 0.00 2.12
3044 3598 8.467963 TCCCCGTTTCTTTTCTTTTTATACTT 57.532 30.769 0.00 0.00 0.00 2.24
3045 3599 8.354426 TCCCCGTTTCTTTTCTTTTTATACTTG 58.646 33.333 0.00 0.00 0.00 3.16
3046 3600 8.354426 CCCCGTTTCTTTTCTTTTTATACTTGA 58.646 33.333 0.00 0.00 0.00 3.02
3047 3601 9.908152 CCCGTTTCTTTTCTTTTTATACTTGAT 57.092 29.630 0.00 0.00 0.00 2.57
3064 3618 8.939201 ATACTTGATTGAGTCACTAAGATGTG 57.061 34.615 14.00 0.00 36.32 3.21
3065 3619 5.641209 ACTTGATTGAGTCACTAAGATGTGC 59.359 40.000 14.00 0.00 36.32 4.57
3066 3620 5.151297 TGATTGAGTCACTAAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
3067 3621 4.931601 TGATTGAGTCACTAAGATGTGCAC 59.068 41.667 10.75 10.75 37.81 4.57
3068 3622 4.607293 TTGAGTCACTAAGATGTGCACT 57.393 40.909 19.41 3.19 37.81 4.40
3069 3623 5.722021 TTGAGTCACTAAGATGTGCACTA 57.278 39.130 19.41 4.84 37.81 2.74
3070 3624 5.722021 TGAGTCACTAAGATGTGCACTAA 57.278 39.130 19.41 0.00 37.81 2.24
3071 3625 5.470368 TGAGTCACTAAGATGTGCACTAAC 58.530 41.667 19.41 9.21 37.81 2.34
3072 3626 5.243954 TGAGTCACTAAGATGTGCACTAACT 59.756 40.000 19.41 11.37 37.81 2.24
3073 3627 6.433093 TGAGTCACTAAGATGTGCACTAACTA 59.567 38.462 19.41 0.00 37.81 2.24
3074 3628 6.857956 AGTCACTAAGATGTGCACTAACTAG 58.142 40.000 19.41 14.95 37.81 2.57
3075 3629 6.037098 GTCACTAAGATGTGCACTAACTAGG 58.963 44.000 19.41 11.90 37.81 3.02
3076 3630 5.127194 TCACTAAGATGTGCACTAACTAGGG 59.873 44.000 19.41 14.07 37.81 3.53
3094 3648 3.861341 GCAGATGTGCCCTAGACAA 57.139 52.632 2.79 0.00 44.72 3.18
3095 3649 2.113860 GCAGATGTGCCCTAGACAAA 57.886 50.000 2.79 0.00 44.72 2.83
3096 3650 1.740025 GCAGATGTGCCCTAGACAAAC 59.260 52.381 2.79 0.00 44.72 2.93
3097 3651 2.616510 GCAGATGTGCCCTAGACAAACT 60.617 50.000 2.79 0.00 44.72 2.66
3098 3652 3.265791 CAGATGTGCCCTAGACAAACTC 58.734 50.000 0.00 0.00 0.00 3.01
3099 3653 3.055530 CAGATGTGCCCTAGACAAACTCT 60.056 47.826 0.00 0.00 0.00 3.24
3100 3654 4.160439 CAGATGTGCCCTAGACAAACTCTA 59.840 45.833 0.00 0.00 0.00 2.43
3101 3655 4.965532 AGATGTGCCCTAGACAAACTCTAT 59.034 41.667 0.00 0.00 30.60 1.98
3102 3656 5.426833 AGATGTGCCCTAGACAAACTCTATT 59.573 40.000 0.00 0.00 30.60 1.73
3103 3657 5.086104 TGTGCCCTAGACAAACTCTATTC 57.914 43.478 0.00 0.00 30.60 1.75
3104 3658 4.530553 TGTGCCCTAGACAAACTCTATTCA 59.469 41.667 0.00 0.00 30.60 2.57
3105 3659 5.012664 TGTGCCCTAGACAAACTCTATTCAA 59.987 40.000 0.00 0.00 30.60 2.69
3106 3660 6.116126 GTGCCCTAGACAAACTCTATTCAAT 58.884 40.000 0.00 0.00 30.60 2.57
3107 3661 7.093068 TGTGCCCTAGACAAACTCTATTCAATA 60.093 37.037 0.00 0.00 30.60 1.90
3108 3662 7.934120 GTGCCCTAGACAAACTCTATTCAATAT 59.066 37.037 0.00 0.00 30.60 1.28
3109 3663 9.154632 TGCCCTAGACAAACTCTATTCAATATA 57.845 33.333 0.00 0.00 30.60 0.86
3110 3664 9.998106 GCCCTAGACAAACTCTATTCAATATAA 57.002 33.333 0.00 0.00 30.60 0.98
3149 3703 9.447157 TTGAACAGTTTATACATGATGATCACA 57.553 29.630 0.00 0.00 0.00 3.58
3150 3704 9.617523 TGAACAGTTTATACATGATGATCACAT 57.382 29.630 0.00 1.01 39.67 3.21
3151 3705 9.874215 GAACAGTTTATACATGATGATCACATG 57.126 33.333 24.51 24.51 46.96 3.21
3152 3706 7.868775 ACAGTTTATACATGATGATCACATGC 58.131 34.615 25.37 14.88 45.95 4.06
3153 3707 7.499895 ACAGTTTATACATGATGATCACATGCA 59.500 33.333 25.37 18.69 45.95 3.96
3154 3708 8.347035 CAGTTTATACATGATGATCACATGCAA 58.653 33.333 25.37 18.62 45.95 4.08
3155 3709 8.905850 AGTTTATACATGATGATCACATGCAAA 58.094 29.630 25.37 20.94 45.95 3.68
3156 3710 9.177304 GTTTATACATGATGATCACATGCAAAG 57.823 33.333 25.37 11.59 45.95 2.77
3157 3711 6.954487 ATACATGATGATCACATGCAAAGT 57.046 33.333 25.37 15.08 45.95 2.66
3158 3712 4.993905 ACATGATGATCACATGCAAAGTG 58.006 39.130 25.37 14.53 45.95 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
606 750 0.732880 CACCCGCTCAGTAACACTCG 60.733 60.000 0.00 0.00 0.00 4.18
607 751 1.014564 GCACCCGCTCAGTAACACTC 61.015 60.000 0.00 0.00 34.30 3.51
608 752 1.004918 GCACCCGCTCAGTAACACT 60.005 57.895 0.00 0.00 34.30 3.55
609 753 2.380410 CGCACCCGCTCAGTAACAC 61.380 63.158 0.00 0.00 35.30 3.32
610 754 2.048597 CGCACCCGCTCAGTAACA 60.049 61.111 0.00 0.00 35.30 2.41
623 767 4.715523 TGGCCTACCCAAGCGCAC 62.716 66.667 11.47 0.00 41.82 5.34
638 782 3.765894 TTGTCAGGTGCCACGGTGG 62.766 63.158 22.87 22.87 41.55 4.61
639 783 2.203139 TTGTCAGGTGCCACGGTG 60.203 61.111 0.00 0.00 0.00 4.94
640 784 2.111043 CTTGTCAGGTGCCACGGT 59.889 61.111 0.00 0.00 0.00 4.83
641 785 2.111043 ACTTGTCAGGTGCCACGG 59.889 61.111 0.00 0.00 0.00 4.94
642 786 2.253758 CCACTTGTCAGGTGCCACG 61.254 63.158 9.52 0.00 33.78 4.94
643 787 1.898574 CCCACTTGTCAGGTGCCAC 60.899 63.158 9.52 0.00 33.78 5.01
644 788 2.515398 CCCACTTGTCAGGTGCCA 59.485 61.111 9.52 0.00 33.78 4.92
645 789 2.985847 GCCCACTTGTCAGGTGCC 60.986 66.667 9.52 0.00 33.78 5.01
646 790 2.985847 GGCCCACTTGTCAGGTGC 60.986 66.667 9.52 0.00 33.78 5.01
647 791 2.282462 GGGCCCACTTGTCAGGTG 60.282 66.667 19.95 8.09 34.78 4.00
648 792 2.450502 AGGGCCCACTTGTCAGGT 60.451 61.111 27.56 0.00 0.00 4.00
649 793 2.034687 CAGGGCCCACTTGTCAGG 59.965 66.667 27.56 0.00 0.00 3.86
650 794 1.302832 GACAGGGCCCACTTGTCAG 60.303 63.158 29.02 10.74 0.00 3.51
651 795 2.836154 GACAGGGCCCACTTGTCA 59.164 61.111 29.02 0.00 0.00 3.58
652 796 2.358737 CGACAGGGCCCACTTGTC 60.359 66.667 27.56 26.49 0.00 3.18
653 797 3.953775 CCGACAGGGCCCACTTGT 61.954 66.667 27.56 20.62 0.00 3.16
654 798 3.901797 GACCGACAGGGCCCACTTG 62.902 68.421 27.56 16.97 40.69 3.16
655 799 3.637273 GACCGACAGGGCCCACTT 61.637 66.667 27.56 7.11 40.69 3.16
662 806 0.100682 CACGTATCTGACCGACAGGG 59.899 60.000 5.68 0.00 45.76 4.45
663 807 0.525668 GCACGTATCTGACCGACAGG 60.526 60.000 5.68 0.00 45.76 4.00
664 808 0.452184 AGCACGTATCTGACCGACAG 59.548 55.000 5.68 3.75 46.97 3.51
665 809 0.450583 GAGCACGTATCTGACCGACA 59.549 55.000 5.68 0.00 0.00 4.35
666 810 0.450583 TGAGCACGTATCTGACCGAC 59.549 55.000 5.68 0.00 0.00 4.79
667 811 1.170442 TTGAGCACGTATCTGACCGA 58.830 50.000 5.68 0.00 0.00 4.69
668 812 2.209838 ATTGAGCACGTATCTGACCG 57.790 50.000 0.00 0.00 0.00 4.79
669 813 3.043586 CGTATTGAGCACGTATCTGACC 58.956 50.000 0.00 0.00 34.74 4.02
670 814 3.948851 TCGTATTGAGCACGTATCTGAC 58.051 45.455 0.00 0.00 40.27 3.51
671 815 4.210832 CTCGTATTGAGCACGTATCTGA 57.789 45.455 0.00 0.00 40.27 3.27
683 827 3.317149 ACAGCCGTATAAGCTCGTATTGA 59.683 43.478 0.00 0.00 38.95 2.57
684 828 3.639538 ACAGCCGTATAAGCTCGTATTG 58.360 45.455 0.00 0.00 38.95 1.90
685 829 3.317149 TGACAGCCGTATAAGCTCGTATT 59.683 43.478 0.00 0.00 38.95 1.89
686 830 2.882761 TGACAGCCGTATAAGCTCGTAT 59.117 45.455 0.00 0.00 38.95 3.06
687 831 2.289820 CTGACAGCCGTATAAGCTCGTA 59.710 50.000 0.00 0.00 38.95 3.43
688 832 1.065701 CTGACAGCCGTATAAGCTCGT 59.934 52.381 0.00 0.00 38.95 4.18
689 833 1.333931 TCTGACAGCCGTATAAGCTCG 59.666 52.381 0.00 0.00 38.95 5.03
690 834 2.544069 GGTCTGACAGCCGTATAAGCTC 60.544 54.545 10.38 0.00 38.95 4.09
691 835 1.409427 GGTCTGACAGCCGTATAAGCT 59.591 52.381 10.38 0.00 42.70 3.74
692 836 1.854227 GGTCTGACAGCCGTATAAGC 58.146 55.000 10.38 0.00 0.00 3.09
693 837 2.121116 CGGTCTGACAGCCGTATAAG 57.879 55.000 22.44 2.50 42.73 1.73
700 844 1.282875 GCAAAACGGTCTGACAGCC 59.717 57.895 10.38 1.72 0.00 4.85
701 845 0.380378 TTGCAAAACGGTCTGACAGC 59.620 50.000 10.38 4.25 0.00 4.40
702 846 1.400142 TGTTGCAAAACGGTCTGACAG 59.600 47.619 10.38 8.33 0.00 3.51
703 847 1.131504 GTGTTGCAAAACGGTCTGACA 59.868 47.619 3.48 0.00 0.00 3.58
704 848 1.400494 AGTGTTGCAAAACGGTCTGAC 59.600 47.619 14.06 0.00 0.00 3.51
705 849 1.745232 AGTGTTGCAAAACGGTCTGA 58.255 45.000 14.06 0.00 0.00 3.27
706 850 2.559998 AAGTGTTGCAAAACGGTCTG 57.440 45.000 14.06 0.00 0.00 3.51
707 851 2.616842 CCTAAGTGTTGCAAAACGGTCT 59.383 45.455 14.06 3.43 0.00 3.85
708 852 2.857104 GCCTAAGTGTTGCAAAACGGTC 60.857 50.000 14.06 3.20 0.00 4.79
709 853 1.066454 GCCTAAGTGTTGCAAAACGGT 59.934 47.619 14.06 8.92 0.00 4.83
710 854 1.336755 AGCCTAAGTGTTGCAAAACGG 59.663 47.619 14.06 10.52 0.00 4.44
711 855 2.774439 AGCCTAAGTGTTGCAAAACG 57.226 45.000 14.06 1.20 0.00 3.60
712 856 5.008712 ACTCTAAGCCTAAGTGTTGCAAAAC 59.991 40.000 12.10 12.10 0.00 2.43
713 857 5.130350 ACTCTAAGCCTAAGTGTTGCAAAA 58.870 37.500 0.00 0.00 0.00 2.44
714 858 4.714632 ACTCTAAGCCTAAGTGTTGCAAA 58.285 39.130 0.00 0.00 0.00 3.68
715 859 4.351874 ACTCTAAGCCTAAGTGTTGCAA 57.648 40.909 0.00 0.00 0.00 4.08
716 860 4.065088 CAACTCTAAGCCTAAGTGTTGCA 58.935 43.478 10.59 0.00 39.88 4.08
717 861 3.437049 CCAACTCTAAGCCTAAGTGTTGC 59.563 47.826 14.96 0.00 42.71 4.17
718 862 3.437049 GCCAACTCTAAGCCTAAGTGTTG 59.563 47.826 14.06 14.06 43.24 3.33
719 863 3.072476 TGCCAACTCTAAGCCTAAGTGTT 59.928 43.478 0.00 0.00 32.46 3.32
720 864 2.637872 TGCCAACTCTAAGCCTAAGTGT 59.362 45.455 0.00 0.00 0.00 3.55
721 865 3.003480 GTGCCAACTCTAAGCCTAAGTG 58.997 50.000 0.00 0.00 0.00 3.16
722 866 2.907042 AGTGCCAACTCTAAGCCTAAGT 59.093 45.455 0.00 0.00 26.77 2.24
723 867 3.265791 CAGTGCCAACTCTAAGCCTAAG 58.734 50.000 0.00 0.00 32.98 2.18
724 868 2.615493 GCAGTGCCAACTCTAAGCCTAA 60.615 50.000 2.85 0.00 32.98 2.69
725 869 1.066143 GCAGTGCCAACTCTAAGCCTA 60.066 52.381 2.85 0.00 32.98 3.93
726 870 0.322008 GCAGTGCCAACTCTAAGCCT 60.322 55.000 2.85 0.00 32.98 4.58
727 871 0.606401 TGCAGTGCCAACTCTAAGCC 60.606 55.000 13.72 0.00 32.98 4.35
728 872 1.131883 CATGCAGTGCCAACTCTAAGC 59.868 52.381 13.72 0.00 32.98 3.09
729 873 1.741706 CCATGCAGTGCCAACTCTAAG 59.258 52.381 13.72 0.00 32.98 2.18
730 874 1.825090 CCATGCAGTGCCAACTCTAA 58.175 50.000 13.72 0.00 32.98 2.10
731 875 0.677731 GCCATGCAGTGCCAACTCTA 60.678 55.000 13.72 0.00 32.98 2.43
732 876 1.975407 GCCATGCAGTGCCAACTCT 60.975 57.895 13.72 0.00 32.98 3.24
733 877 1.808531 TTGCCATGCAGTGCCAACTC 61.809 55.000 13.72 0.00 40.61 3.01
734 878 1.401318 TTTGCCATGCAGTGCCAACT 61.401 50.000 13.72 0.00 40.61 3.16
735 879 0.532417 TTTTGCCATGCAGTGCCAAC 60.532 50.000 13.72 0.00 40.61 3.77
736 880 0.179702 TTTTTGCCATGCAGTGCCAA 59.820 45.000 13.72 6.54 40.61 4.52
737 881 1.828081 TTTTTGCCATGCAGTGCCA 59.172 47.368 13.72 0.00 40.61 4.92
738 882 4.775295 TTTTTGCCATGCAGTGCC 57.225 50.000 13.72 0.00 40.61 5.01
753 897 7.159372 ACGAATCAGTACCACTAGTCATTTTT 58.841 34.615 0.00 0.00 0.00 1.94
754 898 6.698380 ACGAATCAGTACCACTAGTCATTTT 58.302 36.000 0.00 0.00 0.00 1.82
755 899 6.071560 TGACGAATCAGTACCACTAGTCATTT 60.072 38.462 0.00 0.00 32.13 2.32
756 900 5.417894 TGACGAATCAGTACCACTAGTCATT 59.582 40.000 0.00 0.00 32.13 2.57
757 901 4.948004 TGACGAATCAGTACCACTAGTCAT 59.052 41.667 0.00 0.00 32.13 3.06
758 902 4.155462 GTGACGAATCAGTACCACTAGTCA 59.845 45.833 0.00 0.00 34.75 3.41
759 903 4.155462 TGTGACGAATCAGTACCACTAGTC 59.845 45.833 0.00 0.00 34.75 2.59
760 904 4.077108 TGTGACGAATCAGTACCACTAGT 58.923 43.478 0.00 0.00 34.75 2.57
761 905 4.696899 TGTGACGAATCAGTACCACTAG 57.303 45.455 0.00 0.00 34.75 2.57
762 906 4.801891 GTTGTGACGAATCAGTACCACTA 58.198 43.478 0.00 0.00 34.75 2.74
763 907 3.650139 GTTGTGACGAATCAGTACCACT 58.350 45.455 0.00 0.00 34.75 4.00
777 921 2.375110 CACATTTCAGCACGTTGTGAC 58.625 47.619 8.27 0.00 39.98 3.67
778 922 1.333308 CCACATTTCAGCACGTTGTGA 59.667 47.619 14.24 4.37 39.98 3.58
779 923 1.065401 ACCACATTTCAGCACGTTGTG 59.935 47.619 7.20 7.20 37.90 3.33
780 924 1.388547 ACCACATTTCAGCACGTTGT 58.611 45.000 0.00 0.00 0.00 3.32
781 925 2.548057 ACTACCACATTTCAGCACGTTG 59.452 45.455 0.00 0.00 0.00 4.10
782 926 2.548057 CACTACCACATTTCAGCACGTT 59.452 45.455 0.00 0.00 0.00 3.99
783 927 2.143122 CACTACCACATTTCAGCACGT 58.857 47.619 0.00 0.00 0.00 4.49
784 928 2.143122 ACACTACCACATTTCAGCACG 58.857 47.619 0.00 0.00 0.00 5.34
785 929 3.403038 AGACACTACCACATTTCAGCAC 58.597 45.455 0.00 0.00 0.00 4.40
786 930 3.769739 AGACACTACCACATTTCAGCA 57.230 42.857 0.00 0.00 0.00 4.41
787 931 3.365364 GCAAGACACTACCACATTTCAGC 60.365 47.826 0.00 0.00 0.00 4.26
788 932 3.814842 TGCAAGACACTACCACATTTCAG 59.185 43.478 0.00 0.00 0.00 3.02
789 933 3.814625 TGCAAGACACTACCACATTTCA 58.185 40.909 0.00 0.00 0.00 2.69
790 934 4.829064 TTGCAAGACACTACCACATTTC 57.171 40.909 0.00 0.00 0.00 2.17
791 935 5.789643 AATTGCAAGACACTACCACATTT 57.210 34.783 4.94 0.00 0.00 2.32
792 936 6.490040 AGTTAATTGCAAGACACTACCACATT 59.510 34.615 4.94 0.00 0.00 2.71
793 937 6.003950 AGTTAATTGCAAGACACTACCACAT 58.996 36.000 4.94 0.00 0.00 3.21
794 938 5.373222 AGTTAATTGCAAGACACTACCACA 58.627 37.500 4.94 0.00 0.00 4.17
795 939 5.468746 TGAGTTAATTGCAAGACACTACCAC 59.531 40.000 4.94 0.00 0.00 4.16
796 940 5.616270 TGAGTTAATTGCAAGACACTACCA 58.384 37.500 4.94 0.00 0.00 3.25
797 941 6.595716 AGATGAGTTAATTGCAAGACACTACC 59.404 38.462 4.94 0.00 0.00 3.18
798 942 7.602517 AGATGAGTTAATTGCAAGACACTAC 57.397 36.000 4.94 0.00 0.00 2.73
799 943 7.764443 GGTAGATGAGTTAATTGCAAGACACTA 59.236 37.037 4.94 4.57 0.00 2.74
800 944 6.595716 GGTAGATGAGTTAATTGCAAGACACT 59.404 38.462 4.94 6.09 0.00 3.55
801 945 6.371548 TGGTAGATGAGTTAATTGCAAGACAC 59.628 38.462 4.94 0.73 0.00 3.67
802 946 6.472016 TGGTAGATGAGTTAATTGCAAGACA 58.528 36.000 4.94 0.00 0.00 3.41
803 947 6.985188 TGGTAGATGAGTTAATTGCAAGAC 57.015 37.500 4.94 3.79 0.00 3.01
804 948 6.543465 CCATGGTAGATGAGTTAATTGCAAGA 59.457 38.462 4.94 0.00 0.00 3.02
805 949 6.543465 TCCATGGTAGATGAGTTAATTGCAAG 59.457 38.462 12.58 0.00 0.00 4.01
806 950 6.318648 GTCCATGGTAGATGAGTTAATTGCAA 59.681 38.462 12.58 0.00 0.00 4.08
807 951 5.822519 GTCCATGGTAGATGAGTTAATTGCA 59.177 40.000 12.58 0.00 0.00 4.08
808 952 5.822519 TGTCCATGGTAGATGAGTTAATTGC 59.177 40.000 12.58 0.00 0.00 3.56
809 953 7.465916 CGTTGTCCATGGTAGATGAGTTAATTG 60.466 40.741 12.58 0.00 0.00 2.32
810 954 6.538742 CGTTGTCCATGGTAGATGAGTTAATT 59.461 38.462 12.58 0.00 0.00 1.40
811 955 6.049149 CGTTGTCCATGGTAGATGAGTTAAT 58.951 40.000 12.58 0.00 0.00 1.40
812 956 5.186215 TCGTTGTCCATGGTAGATGAGTTAA 59.814 40.000 12.58 0.00 0.00 2.01
813 957 4.707934 TCGTTGTCCATGGTAGATGAGTTA 59.292 41.667 12.58 0.00 0.00 2.24
814 958 3.513912 TCGTTGTCCATGGTAGATGAGTT 59.486 43.478 12.58 0.00 0.00 3.01
815 959 3.096852 TCGTTGTCCATGGTAGATGAGT 58.903 45.455 12.58 0.00 0.00 3.41
816 960 3.448686 GTCGTTGTCCATGGTAGATGAG 58.551 50.000 12.58 0.00 0.00 2.90
817 961 2.167693 GGTCGTTGTCCATGGTAGATGA 59.832 50.000 12.58 6.71 0.00 2.92
818 962 2.093711 TGGTCGTTGTCCATGGTAGATG 60.094 50.000 12.58 4.41 0.00 2.90
823 967 0.250295 CAGTGGTCGTTGTCCATGGT 60.250 55.000 12.58 0.00 37.30 3.55
824 968 0.034756 TCAGTGGTCGTTGTCCATGG 59.965 55.000 4.97 4.97 37.30 3.66
870 1014 2.427232 TCGTGTACTCTTTCGTTGGG 57.573 50.000 0.00 0.00 0.00 4.12
945 1093 3.128259 CGATATGGCTGGTGATCGG 57.872 57.895 0.00 0.00 37.99 4.18
951 1099 2.171840 CTAGCTACCGATATGGCTGGT 58.828 52.381 0.00 0.00 43.94 4.00
952 1100 1.134965 GCTAGCTACCGATATGGCTGG 60.135 57.143 7.70 0.00 43.94 4.85
953 1101 1.546029 TGCTAGCTACCGATATGGCTG 59.454 52.381 17.23 0.00 43.94 4.85
954 1102 1.821753 CTGCTAGCTACCGATATGGCT 59.178 52.381 17.23 0.00 43.94 4.75
955 1103 1.819288 TCTGCTAGCTACCGATATGGC 59.181 52.381 17.23 0.00 43.94 4.40
956 1104 3.773860 CTCTGCTAGCTACCGATATGG 57.226 52.381 17.23 0.00 46.41 2.74
1215 1374 0.662374 GCTCTTCGTCGTCGGTGAAA 60.662 55.000 1.55 0.00 37.69 2.69
1239 1398 0.475475 TGGCATGGAGGGTGATGATC 59.525 55.000 0.00 0.00 0.00 2.92
1389 1579 6.312918 TGTCAGTGTCAAACTCAAAGACTAAC 59.687 38.462 0.00 0.00 36.83 2.34
1546 1745 2.974148 CAGCTGCTGGTGCGTCAA 60.974 61.111 21.71 0.00 43.34 3.18
1605 1804 3.041940 GTGACGTTGAGGTGGGCG 61.042 66.667 0.00 0.00 0.00 6.13
1613 1812 2.110213 GCTGGTGGGTGACGTTGA 59.890 61.111 0.00 0.00 0.00 3.18
1614 1813 2.203139 TGCTGGTGGGTGACGTTG 60.203 61.111 0.00 0.00 0.00 4.10
1615 1814 1.768684 ATCTGCTGGTGGGTGACGTT 61.769 55.000 0.00 0.00 0.00 3.99
1616 1815 2.217038 ATCTGCTGGTGGGTGACGT 61.217 57.895 0.00 0.00 0.00 4.34
1617 1816 1.742880 CATCTGCTGGTGGGTGACG 60.743 63.158 0.00 0.00 0.00 4.35
1618 1817 2.042831 GCATCTGCTGGTGGGTGAC 61.043 63.158 5.95 0.00 38.21 3.67
1619 1818 2.352422 GCATCTGCTGGTGGGTGA 59.648 61.111 5.95 0.00 38.21 4.02
1620 1819 2.753043 GGCATCTGCTGGTGGGTG 60.753 66.667 5.95 0.00 41.70 4.61
1621 1820 4.415150 CGGCATCTGCTGGTGGGT 62.415 66.667 5.95 0.00 43.47 4.51
1848 2062 3.446161 AGTTCATCTGGTTCCGAACGATA 59.554 43.478 5.19 0.00 42.01 2.92
1856 2070 2.027192 TGCAGGTAGTTCATCTGGTTCC 60.027 50.000 0.00 0.00 0.00 3.62
1967 2201 0.949397 CAGTTCAGCTGCTGCAAAGA 59.051 50.000 24.38 9.53 42.74 2.52
2046 2407 2.978010 CCAAACTCTTGCGCCGGT 60.978 61.111 4.18 0.00 0.00 5.28
2055 2416 2.113986 AGCAAGCCGCCAAACTCT 59.886 55.556 0.00 0.00 44.04 3.24
2117 2478 4.096984 CCAATATGTCCTTCCAGAAACAGC 59.903 45.833 0.00 0.00 0.00 4.40
2120 2481 6.094186 GTCTTCCAATATGTCCTTCCAGAAAC 59.906 42.308 0.00 0.00 0.00 2.78
2206 2591 7.994425 AATCAATGAATGTTGTAGTACACCA 57.006 32.000 1.43 2.13 0.00 4.17
2256 2655 8.787852 ACCTTCAACTTCACTGAAAAATCTATC 58.212 33.333 0.00 0.00 32.57 2.08
2351 2756 1.535462 CTTGGATGGTTCTCGCGTTTT 59.465 47.619 5.77 0.00 0.00 2.43
2361 2766 6.953520 TGGAATCTCATTTTACTTGGATGGTT 59.046 34.615 0.00 0.00 0.00 3.67
2468 2889 8.736244 GTGTAAACCAGTATAACATTCCATTGT 58.264 33.333 0.00 0.00 0.00 2.71
2493 2914 4.647853 TCGTATTAGCTAGATGGGTTGTGT 59.352 41.667 0.00 0.00 0.00 3.72
2531 2954 3.810941 TGTACTCAGCTTTTTAACCCGTG 59.189 43.478 0.00 0.00 0.00 4.94
2577 3116 4.327680 CTCCTGTTGGTTCCTAGAAAAGG 58.672 47.826 0.00 0.00 39.67 3.11
2578 3117 3.753797 GCTCCTGTTGGTTCCTAGAAAAG 59.246 47.826 0.00 0.00 34.23 2.27
2584 3123 2.879756 GCAATGCTCCTGTTGGTTCCTA 60.880 50.000 0.00 0.00 34.23 2.94
2645 3184 5.338365 CAAGTTAGCCTCAGAATTTGCATC 58.662 41.667 0.00 0.00 0.00 3.91
2662 3201 3.706600 ATGTAGGGTTTCGGCAAGTTA 57.293 42.857 0.00 0.00 0.00 2.24
2757 3301 1.940613 GGTTTTGCTATTCGAGGCGAT 59.059 47.619 0.00 0.00 35.23 4.58
2803 3350 6.332976 AGTCAGGGGTAAATCATCTTGAAT 57.667 37.500 0.00 0.00 0.00 2.57
2808 3355 6.893020 AACTAAGTCAGGGGTAAATCATCT 57.107 37.500 0.00 0.00 0.00 2.90
2826 3379 9.810545 CCAAGTGAAACATTTTTAGGAAACTAA 57.189 29.630 0.00 0.00 46.06 2.24
2841 3395 2.116827 ACCACGTTCCAAGTGAAACA 57.883 45.000 0.00 0.00 41.83 2.83
2845 3399 4.710324 AGAAAATACCACGTTCCAAGTGA 58.290 39.130 0.00 0.00 41.83 3.41
2856 3410 7.029563 CCACTGAATTTGCTAGAAAATACCAC 58.970 38.462 9.20 3.14 0.00 4.16
2901 3455 5.339990 ACTGTATTGAATATTGTTTGCGCC 58.660 37.500 4.18 0.00 0.00 6.53
2936 3490 8.424133 TGCATTACTTATGACACATCTAGATGT 58.576 33.333 28.95 28.95 43.47 3.06
2937 3491 8.706936 GTGCATTACTTATGACACATCTAGATG 58.293 37.037 27.63 27.63 39.24 2.90
2938 3492 8.424133 TGTGCATTACTTATGACACATCTAGAT 58.576 33.333 0.00 0.00 41.73 1.98
2939 3493 7.781056 TGTGCATTACTTATGACACATCTAGA 58.219 34.615 0.00 0.00 41.73 2.43
2940 3494 8.599055 ATGTGCATTACTTATGACACATCTAG 57.401 34.615 15.49 0.00 46.75 2.43
2945 3499 8.040727 ACTTAGATGTGCATTACTTATGACACA 58.959 33.333 13.32 13.32 45.90 3.72
2946 3500 8.425577 ACTTAGATGTGCATTACTTATGACAC 57.574 34.615 0.00 0.00 39.56 3.67
2947 3501 9.098355 GAACTTAGATGTGCATTACTTATGACA 57.902 33.333 0.00 0.00 36.26 3.58
2948 3502 9.319143 AGAACTTAGATGTGCATTACTTATGAC 57.681 33.333 0.00 0.00 36.26 3.06
2952 3506 9.261180 GCATAGAACTTAGATGTGCATTACTTA 57.739 33.333 0.00 0.00 0.00 2.24
2953 3507 7.227512 GGCATAGAACTTAGATGTGCATTACTT 59.772 37.037 0.00 0.00 33.05 2.24
2954 3508 6.708054 GGCATAGAACTTAGATGTGCATTACT 59.292 38.462 0.00 0.00 33.05 2.24
2955 3509 6.483307 TGGCATAGAACTTAGATGTGCATTAC 59.517 38.462 0.00 0.00 33.05 1.89
2956 3510 6.591001 TGGCATAGAACTTAGATGTGCATTA 58.409 36.000 0.00 0.00 33.05 1.90
2957 3511 5.439721 TGGCATAGAACTTAGATGTGCATT 58.560 37.500 0.00 0.00 33.05 3.56
2958 3512 5.039920 TGGCATAGAACTTAGATGTGCAT 57.960 39.130 0.00 0.00 33.05 3.96
2959 3513 4.486125 TGGCATAGAACTTAGATGTGCA 57.514 40.909 0.00 0.00 33.05 4.57
2960 3514 7.496529 TTAATGGCATAGAACTTAGATGTGC 57.503 36.000 0.00 0.00 0.00 4.57
2961 3515 9.499479 AGATTAATGGCATAGAACTTAGATGTG 57.501 33.333 0.00 0.00 0.00 3.21
2965 3519 9.692749 CGTAAGATTAATGGCATAGAACTTAGA 57.307 33.333 0.00 0.00 43.02 2.10
2966 3520 9.477484 ACGTAAGATTAATGGCATAGAACTTAG 57.523 33.333 0.00 6.44 43.62 2.18
2967 3521 9.256477 CACGTAAGATTAATGGCATAGAACTTA 57.744 33.333 0.00 6.71 43.62 2.24
2968 3522 7.226720 CCACGTAAGATTAATGGCATAGAACTT 59.773 37.037 0.00 7.65 43.62 2.66
2969 3523 6.706270 CCACGTAAGATTAATGGCATAGAACT 59.294 38.462 0.00 0.00 43.62 3.01
2970 3524 6.704493 TCCACGTAAGATTAATGGCATAGAAC 59.296 38.462 0.00 0.00 43.62 3.01
2971 3525 6.822442 TCCACGTAAGATTAATGGCATAGAA 58.178 36.000 0.00 0.00 43.62 2.10
2972 3526 6.266786 TCTCCACGTAAGATTAATGGCATAGA 59.733 38.462 0.00 0.00 43.62 1.98
2973 3527 6.455647 TCTCCACGTAAGATTAATGGCATAG 58.544 40.000 0.00 0.00 43.62 2.23
2974 3528 6.413783 TCTCCACGTAAGATTAATGGCATA 57.586 37.500 0.00 0.00 43.62 3.14
2975 3529 5.290493 TCTCCACGTAAGATTAATGGCAT 57.710 39.130 0.00 0.00 43.62 4.40
2976 3530 4.746535 TCTCCACGTAAGATTAATGGCA 57.253 40.909 0.00 0.00 43.62 4.92
2977 3531 5.179555 GGAATCTCCACGTAAGATTAATGGC 59.820 44.000 19.69 10.62 42.17 4.40
2978 3532 6.425114 CAGGAATCTCCACGTAAGATTAATGG 59.575 42.308 19.69 10.11 42.17 3.16
2979 3533 6.986817 ACAGGAATCTCCACGTAAGATTAATG 59.013 38.462 19.69 20.46 42.17 1.90
2980 3534 6.986817 CACAGGAATCTCCACGTAAGATTAAT 59.013 38.462 19.69 11.77 42.17 1.40
2981 3535 6.338146 CACAGGAATCTCCACGTAAGATTAA 58.662 40.000 19.69 0.00 42.17 1.40
2982 3536 5.163447 CCACAGGAATCTCCACGTAAGATTA 60.163 44.000 19.69 0.51 42.17 1.75
2983 3537 4.383118 CCACAGGAATCTCCACGTAAGATT 60.383 45.833 19.74 19.74 44.21 2.40
2984 3538 3.133003 CCACAGGAATCTCCACGTAAGAT 59.867 47.826 6.77 6.77 39.61 2.40
2985 3539 2.496070 CCACAGGAATCTCCACGTAAGA 59.504 50.000 2.62 2.62 39.61 2.10
2986 3540 2.418746 CCCACAGGAATCTCCACGTAAG 60.419 54.545 0.00 0.00 39.61 2.34
2987 3541 1.553248 CCCACAGGAATCTCCACGTAA 59.447 52.381 0.00 0.00 39.61 3.18
2988 3542 1.191535 CCCACAGGAATCTCCACGTA 58.808 55.000 0.00 0.00 39.61 3.57
2989 3543 0.836400 ACCCACAGGAATCTCCACGT 60.836 55.000 0.00 0.00 39.61 4.49
2990 3544 1.191535 TACCCACAGGAATCTCCACG 58.808 55.000 0.00 0.00 39.61 4.94
2991 3545 3.933861 AATACCCACAGGAATCTCCAC 57.066 47.619 0.00 0.00 39.61 4.02
2992 3546 3.202151 GGAAATACCCACAGGAATCTCCA 59.798 47.826 0.00 0.00 39.61 3.86
2993 3547 3.459969 AGGAAATACCCACAGGAATCTCC 59.540 47.826 0.00 0.00 40.05 3.71
2994 3548 4.779993 AGGAAATACCCACAGGAATCTC 57.220 45.455 0.00 0.00 40.05 2.75
2995 3549 5.536497 AAAGGAAATACCCACAGGAATCT 57.464 39.130 0.00 0.00 40.05 2.40
2996 3550 6.351033 GGAAAAAGGAAATACCCACAGGAATC 60.351 42.308 0.00 0.00 40.05 2.52
2997 3551 5.483937 GGAAAAAGGAAATACCCACAGGAAT 59.516 40.000 0.00 0.00 40.05 3.01
2998 3552 4.836175 GGAAAAAGGAAATACCCACAGGAA 59.164 41.667 0.00 0.00 40.05 3.36
2999 3553 4.412843 GGAAAAAGGAAATACCCACAGGA 58.587 43.478 0.00 0.00 40.05 3.86
3000 3554 3.513912 GGGAAAAAGGAAATACCCACAGG 59.486 47.826 0.00 0.00 40.05 4.00
3001 3555 3.513912 GGGGAAAAAGGAAATACCCACAG 59.486 47.826 0.00 0.00 39.10 3.66
3002 3556 3.512496 GGGGAAAAAGGAAATACCCACA 58.488 45.455 0.00 0.00 39.10 4.17
3003 3557 2.494471 CGGGGAAAAAGGAAATACCCAC 59.506 50.000 0.00 0.00 39.10 4.61
3004 3558 2.110365 ACGGGGAAAAAGGAAATACCCA 59.890 45.455 0.00 0.00 39.10 4.51
3005 3559 2.811410 ACGGGGAAAAAGGAAATACCC 58.189 47.619 0.00 0.00 40.05 3.69
3006 3560 4.525487 AGAAACGGGGAAAAAGGAAATACC 59.475 41.667 0.00 0.00 39.35 2.73
3007 3561 5.717078 AGAAACGGGGAAAAAGGAAATAC 57.283 39.130 0.00 0.00 0.00 1.89
3008 3562 6.734502 AAAGAAACGGGGAAAAAGGAAATA 57.265 33.333 0.00 0.00 0.00 1.40
3009 3563 5.623956 AAAGAAACGGGGAAAAAGGAAAT 57.376 34.783 0.00 0.00 0.00 2.17
3010 3564 5.188163 AGAAAAGAAACGGGGAAAAAGGAAA 59.812 36.000 0.00 0.00 0.00 3.13
3011 3565 4.712829 AGAAAAGAAACGGGGAAAAAGGAA 59.287 37.500 0.00 0.00 0.00 3.36
3012 3566 4.283337 AGAAAAGAAACGGGGAAAAAGGA 58.717 39.130 0.00 0.00 0.00 3.36
3013 3567 4.665833 AGAAAAGAAACGGGGAAAAAGG 57.334 40.909 0.00 0.00 0.00 3.11
3014 3568 6.978343 AAAAGAAAAGAAACGGGGAAAAAG 57.022 33.333 0.00 0.00 0.00 2.27
3016 3570 9.531942 GTATAAAAAGAAAAGAAACGGGGAAAA 57.468 29.630 0.00 0.00 0.00 2.29
3017 3571 8.916062 AGTATAAAAAGAAAAGAAACGGGGAAA 58.084 29.630 0.00 0.00 0.00 3.13
3018 3572 8.467963 AGTATAAAAAGAAAAGAAACGGGGAA 57.532 30.769 0.00 0.00 0.00 3.97
3019 3573 8.354426 CAAGTATAAAAAGAAAAGAAACGGGGA 58.646 33.333 0.00 0.00 0.00 4.81
3020 3574 8.354426 TCAAGTATAAAAAGAAAAGAAACGGGG 58.646 33.333 0.00 0.00 0.00 5.73
3021 3575 9.908152 ATCAAGTATAAAAAGAAAAGAAACGGG 57.092 29.630 0.00 0.00 0.00 5.28
3039 3593 7.493971 GCACATCTTAGTGACTCAATCAAGTAT 59.506 37.037 0.00 0.00 42.05 2.12
3040 3594 6.813649 GCACATCTTAGTGACTCAATCAAGTA 59.186 38.462 0.00 0.00 42.05 2.24
3041 3595 5.641209 GCACATCTTAGTGACTCAATCAAGT 59.359 40.000 0.00 0.00 42.05 3.16
3042 3596 5.640783 TGCACATCTTAGTGACTCAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
3043 3597 5.409520 GTGCACATCTTAGTGACTCAATCAA 59.590 40.000 13.17 0.00 42.05 2.57
3044 3598 4.931601 GTGCACATCTTAGTGACTCAATCA 59.068 41.667 13.17 0.00 42.05 2.57
3045 3599 5.174395 AGTGCACATCTTAGTGACTCAATC 58.826 41.667 21.04 0.00 42.05 2.67
3046 3600 5.157940 AGTGCACATCTTAGTGACTCAAT 57.842 39.130 21.04 0.00 42.05 2.57
3047 3601 4.607293 AGTGCACATCTTAGTGACTCAA 57.393 40.909 21.04 0.00 42.05 3.02
3048 3602 5.243954 AGTTAGTGCACATCTTAGTGACTCA 59.756 40.000 21.04 0.00 42.05 3.41
3049 3603 5.715070 AGTTAGTGCACATCTTAGTGACTC 58.285 41.667 21.04 0.00 42.05 3.36
3050 3604 5.730296 AGTTAGTGCACATCTTAGTGACT 57.270 39.130 21.04 5.62 42.05 3.41
3051 3605 6.037098 CCTAGTTAGTGCACATCTTAGTGAC 58.963 44.000 21.04 3.16 42.05 3.67
3052 3606 5.127194 CCCTAGTTAGTGCACATCTTAGTGA 59.873 44.000 21.04 0.00 42.05 3.41
3053 3607 5.352284 CCCTAGTTAGTGCACATCTTAGTG 58.648 45.833 21.04 3.37 42.37 2.74
3054 3608 4.141914 GCCCTAGTTAGTGCACATCTTAGT 60.142 45.833 21.04 0.00 0.00 2.24
3055 3609 4.141937 TGCCCTAGTTAGTGCACATCTTAG 60.142 45.833 21.04 14.20 31.79 2.18
3056 3610 3.772572 TGCCCTAGTTAGTGCACATCTTA 59.227 43.478 21.04 5.37 31.79 2.10
3057 3611 2.571653 TGCCCTAGTTAGTGCACATCTT 59.428 45.455 21.04 0.00 31.79 2.40
3058 3612 2.169352 CTGCCCTAGTTAGTGCACATCT 59.831 50.000 21.04 15.47 31.79 2.90
3059 3613 2.168521 TCTGCCCTAGTTAGTGCACATC 59.831 50.000 21.04 8.66 31.79 3.06
3060 3614 2.187958 TCTGCCCTAGTTAGTGCACAT 58.812 47.619 21.04 6.83 31.79 3.21
3061 3615 1.639722 TCTGCCCTAGTTAGTGCACA 58.360 50.000 21.04 1.84 31.79 4.57
3062 3616 2.093447 ACATCTGCCCTAGTTAGTGCAC 60.093 50.000 9.40 9.40 31.79 4.57
3063 3617 2.093500 CACATCTGCCCTAGTTAGTGCA 60.093 50.000 0.00 0.00 34.34 4.57
3064 3618 2.555199 CACATCTGCCCTAGTTAGTGC 58.445 52.381 0.00 0.00 0.00 4.40
3065 3619 2.555199 GCACATCTGCCCTAGTTAGTG 58.445 52.381 0.00 0.00 37.45 2.74
3066 3620 2.990066 GCACATCTGCCCTAGTTAGT 57.010 50.000 0.00 0.00 37.45 2.24
3076 3630 1.740025 GTTTGTCTAGGGCACATCTGC 59.260 52.381 0.00 0.00 43.41 4.26
3077 3631 3.055530 AGAGTTTGTCTAGGGCACATCTG 60.056 47.826 0.00 0.00 31.71 2.90
3078 3632 3.177228 AGAGTTTGTCTAGGGCACATCT 58.823 45.455 0.00 0.00 31.71 2.90
3079 3633 3.618690 AGAGTTTGTCTAGGGCACATC 57.381 47.619 0.00 0.00 31.71 3.06
3080 3634 5.189736 TGAATAGAGTTTGTCTAGGGCACAT 59.810 40.000 0.00 0.00 41.28 3.21
3081 3635 4.530553 TGAATAGAGTTTGTCTAGGGCACA 59.469 41.667 0.00 0.00 41.28 4.57
3082 3636 5.086104 TGAATAGAGTTTGTCTAGGGCAC 57.914 43.478 0.00 0.00 41.28 5.01
3083 3637 5.755409 TTGAATAGAGTTTGTCTAGGGCA 57.245 39.130 0.00 0.00 41.28 5.36
3084 3638 9.998106 TTATATTGAATAGAGTTTGTCTAGGGC 57.002 33.333 0.00 0.00 41.28 5.19
3123 3677 9.447157 TGTGATCATCATGTATAAACTGTTCAA 57.553 29.630 0.00 0.00 0.00 2.69
3124 3678 9.617523 ATGTGATCATCATGTATAAACTGTTCA 57.382 29.630 0.00 0.00 0.00 3.18
3125 3679 9.874215 CATGTGATCATCATGTATAAACTGTTC 57.126 33.333 20.87 0.00 38.17 3.18
3126 3680 8.347771 GCATGTGATCATCATGTATAAACTGTT 58.652 33.333 25.58 0.00 42.94 3.16
3127 3681 7.499895 TGCATGTGATCATCATGTATAAACTGT 59.500 33.333 25.58 0.00 42.94 3.55
3128 3682 7.867752 TGCATGTGATCATCATGTATAAACTG 58.132 34.615 25.58 10.40 42.94 3.16
3129 3683 8.454570 TTGCATGTGATCATCATGTATAAACT 57.545 30.769 25.58 0.81 42.94 2.66
3130 3684 9.177304 CTTTGCATGTGATCATCATGTATAAAC 57.823 33.333 25.58 15.49 42.94 2.01
3131 3685 8.905850 ACTTTGCATGTGATCATCATGTATAAA 58.094 29.630 25.58 22.32 42.94 1.40
3132 3686 8.347035 CACTTTGCATGTGATCATCATGTATAA 58.653 33.333 25.58 19.18 42.94 0.98
3133 3687 7.716123 TCACTTTGCATGTGATCATCATGTATA 59.284 33.333 25.58 19.49 42.94 1.47
3134 3688 6.544564 TCACTTTGCATGTGATCATCATGTAT 59.455 34.615 25.58 13.20 42.94 2.29
3135 3689 5.881443 TCACTTTGCATGTGATCATCATGTA 59.119 36.000 25.58 22.00 42.94 2.29
3136 3690 4.703093 TCACTTTGCATGTGATCATCATGT 59.297 37.500 25.58 12.53 42.94 3.21
3137 3691 5.034797 GTCACTTTGCATGTGATCATCATG 58.965 41.667 23.09 23.09 44.74 3.07
3138 3692 5.244785 GTCACTTTGCATGTGATCATCAT 57.755 39.130 20.81 1.73 44.74 2.45
3139 3693 4.690184 GTCACTTTGCATGTGATCATCA 57.310 40.909 20.81 0.00 44.74 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.