Multiple sequence alignment - TraesCS2A01G446500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G446500 chr2A 100.000 6998 0 0 1 6998 695512780 695505783 0.000000e+00 12923.0
1 TraesCS2A01G446500 chr2A 92.547 161 8 3 4024 4184 86445858 86446014 1.960000e-55 228.0
2 TraesCS2A01G446500 chr2A 91.925 161 8 3 4024 4184 107386505 107386660 3.290000e-53 220.0
3 TraesCS2A01G446500 chr2D 94.263 3120 88 39 481 3576 556059335 556056283 0.000000e+00 4686.0
4 TraesCS2A01G446500 chr2D 95.026 2855 88 22 3619 6436 556056218 556053381 0.000000e+00 4436.0
5 TraesCS2A01G446500 chr2D 79.585 289 25 15 480 745 556061759 556061482 7.210000e-40 176.0
6 TraesCS2A01G446500 chr2D 93.023 86 6 0 6569 6654 11162573 11162488 7.370000e-25 126.0
7 TraesCS2A01G446500 chr2D 82.474 97 7 6 126 216 556061910 556061818 7.530000e-10 76.8
8 TraesCS2A01G446500 chr2D 100.000 28 0 0 315 342 535579452 535579425 1.300000e-02 52.8
9 TraesCS2A01G446500 chr2B 93.820 3139 105 37 480 3576 663132851 663129760 0.000000e+00 4639.0
10 TraesCS2A01G446500 chr2B 89.080 2436 133 47 4354 6700 663129028 663126637 0.000000e+00 2902.0
11 TraesCS2A01G446500 chr2B 91.255 263 19 3 6738 6998 663125409 663125149 8.630000e-94 355.0
12 TraesCS2A01G446500 chr2B 92.213 244 18 1 3666 3909 663129672 663129430 1.870000e-90 344.0
13 TraesCS2A01G446500 chr2B 93.636 110 6 1 3914 4022 663129136 663129027 5.620000e-36 163.0
14 TraesCS2A01G446500 chr2B 79.817 109 8 8 150 247 663132936 663132831 4.530000e-07 67.6
15 TraesCS2A01G446500 chr5B 83.663 808 99 18 1955 2747 61369007 61369796 0.000000e+00 730.0
16 TraesCS2A01G446500 chr5B 89.050 484 39 6 3005 3481 61370072 61370548 7.820000e-164 588.0
17 TraesCS2A01G446500 chr5B 77.140 958 173 32 4559 5480 61382733 61383680 1.350000e-141 514.0
18 TraesCS2A01G446500 chr5B 97.143 35 0 1 6563 6596 261372010 261372044 2.730000e-04 58.4
19 TraesCS2A01G446500 chr1D 83.773 758 88 14 1959 2698 493211779 493212519 0.000000e+00 686.0
20 TraesCS2A01G446500 chr1D 91.190 420 37 0 3067 3486 493212818 493213237 7.870000e-159 571.0
21 TraesCS2A01G446500 chr1D 81.167 600 91 18 4899 5480 493220850 493221445 4.940000e-126 462.0
22 TraesCS2A01G446500 chr1B 83.531 759 89 13 1959 2698 685366240 685365499 0.000000e+00 676.0
23 TraesCS2A01G446500 chr1B 88.000 500 44 6 3005 3496 685365265 685364774 1.690000e-160 577.0
24 TraesCS2A01G446500 chr1B 76.553 998 161 43 4469 5410 685363588 685362608 4.910000e-131 479.0
25 TraesCS2A01G446500 chr1B 82.381 420 73 1 3078 3497 49934357 49934775 1.430000e-96 364.0
26 TraesCS2A01G446500 chr1B 82.119 151 17 8 5858 6001 49937240 49937387 3.430000e-23 121.0
27 TraesCS2A01G446500 chr7D 93.125 160 9 1 4021 4180 457148792 457148949 4.220000e-57 233.0
28 TraesCS2A01G446500 chr1A 93.125 160 9 1 4024 4183 36791922 36791765 4.220000e-57 233.0
29 TraesCS2A01G446500 chr1A 83.893 149 18 5 5858 6001 31176074 31176221 3.400000e-28 137.0
30 TraesCS2A01G446500 chr3B 91.411 163 10 4 4019 4180 420877289 420877130 3.290000e-53 220.0
31 TraesCS2A01G446500 chr3B 97.059 34 1 0 3510 3543 59238141 59238108 2.730000e-04 58.4
32 TraesCS2A01G446500 chr4B 90.000 170 15 1 4014 4183 599982680 599982513 1.180000e-52 219.0
33 TraesCS2A01G446500 chr4A 87.565 193 18 6 3991 4180 60041066 60041255 1.180000e-52 219.0
34 TraesCS2A01G446500 chr3D 90.741 162 13 2 4019 4180 300566850 300567009 1.530000e-51 215.0
35 TraesCS2A01G446500 chr6A 91.667 84 7 0 6569 6652 614844481 614844564 4.430000e-22 117.0
36 TraesCS2A01G446500 chr6A 100.000 28 0 0 6567 6594 609002387 609002414 1.300000e-02 52.8
37 TraesCS2A01G446500 chr7A 89.362 47 5 0 306 352 678930556 678930602 7.580000e-05 60.2
38 TraesCS2A01G446500 chr7A 100.000 29 0 0 314 342 460315685 460315657 4.000000e-03 54.7
39 TraesCS2A01G446500 chr5D 94.595 37 2 0 306 342 488866810 488866774 2.730000e-04 58.4
40 TraesCS2A01G446500 chr7B 100.000 29 0 0 314 342 712744610 712744638 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G446500 chr2A 695505783 695512780 6997 True 12923.000000 12923 100.000000 1 6998 1 chr2A.!!$R1 6997
1 TraesCS2A01G446500 chr2D 556053381 556061910 8529 True 2343.700000 4686 87.837000 126 6436 4 chr2D.!!$R3 6310
2 TraesCS2A01G446500 chr2B 663125149 663132936 7787 True 1411.766667 4639 89.970167 150 6998 6 chr2B.!!$R1 6848
3 TraesCS2A01G446500 chr5B 61369007 61370548 1541 False 659.000000 730 86.356500 1955 3481 2 chr5B.!!$F3 1526
4 TraesCS2A01G446500 chr5B 61382733 61383680 947 False 514.000000 514 77.140000 4559 5480 1 chr5B.!!$F1 921
5 TraesCS2A01G446500 chr1D 493211779 493213237 1458 False 628.500000 686 87.481500 1959 3486 2 chr1D.!!$F2 1527
6 TraesCS2A01G446500 chr1D 493220850 493221445 595 False 462.000000 462 81.167000 4899 5480 1 chr1D.!!$F1 581
7 TraesCS2A01G446500 chr1B 685362608 685366240 3632 True 577.333333 676 82.694667 1959 5410 3 chr1B.!!$R1 3451
8 TraesCS2A01G446500 chr1B 49934357 49937387 3030 False 242.500000 364 82.250000 3078 6001 2 chr1B.!!$F1 2923

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
58 59 0.025001 CCGCAGCGTCGACTAAATTG 59.975 55.0 15.05 5.73 0.00 2.32 F
551 3024 0.242017 GGTCAAACCACTGCAGCATC 59.758 55.0 15.27 0.00 38.42 3.91 F
608 3081 0.308376 GAGGATCCGTCGTAGCAGAC 59.692 60.0 5.98 0.00 37.76 3.51 F
1668 4187 0.458669 GGCTGCCAAAGGATCATGTG 59.541 55.0 15.17 0.00 0.00 3.21 F
1927 4446 0.638746 GACGTGCGGTTATCACTTCG 59.361 55.0 0.00 0.00 32.54 3.79 F
2778 5327 0.884514 GCCTTGGAACTTCTCTTGGC 59.115 55.0 0.00 0.00 0.00 4.52 F
3675 6321 0.390735 GCAAGGGCCAATTCTGCTTG 60.391 55.0 6.18 8.23 0.00 4.01 F
4879 8275 1.186200 TCTTCCCGGAGAGTCACATG 58.814 55.0 0.73 0.00 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1410 3921 0.179145 ATTAAGCCGTCACCTCGTCG 60.179 55.0 0.00 0.00 0.00 5.12 R
2159 4691 0.108138 ACTGAGCCTTGCCGATACAC 60.108 55.0 0.00 0.00 0.00 2.90 R
2870 5456 5.069648 TGAGAACCTCTAACATGGCATCTAG 59.930 44.0 0.00 1.76 0.00 2.43 R
3656 6300 0.390735 CAAGCAGAATTGGCCCTTGC 60.391 55.0 0.00 2.90 0.00 4.01 R
3657 6301 0.390735 GCAAGCAGAATTGGCCCTTG 60.391 55.0 0.00 5.74 36.78 3.61 R
4492 7846 0.548031 CCAAGGCCTATCAGCTTCCA 59.452 55.0 5.16 0.00 0.00 3.53 R
5200 8658 0.251297 CACAATCACCCCTGGAAGCA 60.251 55.0 0.00 0.00 0.00 3.91 R
6825 12750 0.102481 ATCCGTTGCTGCCTACTACG 59.898 55.0 0.00 0.00 36.30 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 6.563422 TCAAAAGTTGCTTATCATACATGCC 58.437 36.000 0.00 0.00 0.00 4.40
28 29 6.152492 TCAAAAGTTGCTTATCATACATGCCA 59.848 34.615 0.00 0.00 0.00 4.92
29 30 6.720112 AAAGTTGCTTATCATACATGCCAT 57.280 33.333 0.00 0.00 0.00 4.40
30 31 5.700722 AGTTGCTTATCATACATGCCATG 57.299 39.130 2.40 2.40 0.00 3.66
31 32 5.135383 AGTTGCTTATCATACATGCCATGT 58.865 37.500 15.69 15.69 46.92 3.21
32 33 5.009310 AGTTGCTTATCATACATGCCATGTG 59.991 40.000 20.36 4.78 44.60 3.21
33 34 3.822167 TGCTTATCATACATGCCATGTGG 59.178 43.478 20.36 12.09 44.60 4.17
34 35 3.822735 GCTTATCATACATGCCATGTGGT 59.177 43.478 20.36 6.18 44.60 4.16
35 36 4.083110 GCTTATCATACATGCCATGTGGTC 60.083 45.833 20.36 0.00 44.60 4.02
36 37 1.952193 TCATACATGCCATGTGGTCG 58.048 50.000 20.36 6.01 44.60 4.79
37 38 0.946528 CATACATGCCATGTGGTCGG 59.053 55.000 20.36 1.64 44.60 4.79
38 39 0.836606 ATACATGCCATGTGGTCGGA 59.163 50.000 20.36 0.00 44.60 4.55
39 40 0.107897 TACATGCCATGTGGTCGGAC 60.108 55.000 20.36 0.00 44.60 4.79
40 41 2.114670 CATGCCATGTGGTCGGACC 61.115 63.158 20.36 20.36 39.22 4.46
41 42 3.680620 ATGCCATGTGGTCGGACCG 62.681 63.158 21.52 7.84 42.58 4.79
53 54 3.807538 GGACCGCAGCGTCGACTA 61.808 66.667 15.05 0.00 33.30 2.59
54 55 2.177531 GACCGCAGCGTCGACTAA 59.822 61.111 15.05 0.00 0.00 2.24
55 56 1.443194 GACCGCAGCGTCGACTAAA 60.443 57.895 15.05 0.00 0.00 1.85
56 57 0.801067 GACCGCAGCGTCGACTAAAT 60.801 55.000 15.05 0.00 0.00 1.40
57 58 0.389426 ACCGCAGCGTCGACTAAATT 60.389 50.000 15.05 0.00 0.00 1.82
58 59 0.025001 CCGCAGCGTCGACTAAATTG 59.975 55.000 15.05 5.73 0.00 2.32
59 60 0.025001 CGCAGCGTCGACTAAATTGG 59.975 55.000 14.70 0.00 0.00 3.16
60 61 0.373716 GCAGCGTCGACTAAATTGGG 59.626 55.000 14.70 0.00 0.00 4.12
61 62 0.373716 CAGCGTCGACTAAATTGGGC 59.626 55.000 14.70 6.84 0.00 5.36
62 63 0.249398 AGCGTCGACTAAATTGGGCT 59.751 50.000 14.70 9.18 0.00 5.19
63 64 0.651031 GCGTCGACTAAATTGGGCTC 59.349 55.000 14.70 0.00 0.00 4.70
64 65 2.004583 CGTCGACTAAATTGGGCTCA 57.995 50.000 14.70 0.00 0.00 4.26
65 66 2.550978 CGTCGACTAAATTGGGCTCAT 58.449 47.619 14.70 0.00 0.00 2.90
66 67 2.285220 CGTCGACTAAATTGGGCTCATG 59.715 50.000 14.70 0.00 0.00 3.07
67 68 2.614057 GTCGACTAAATTGGGCTCATGG 59.386 50.000 8.70 0.00 0.00 3.66
68 69 2.238646 TCGACTAAATTGGGCTCATGGT 59.761 45.455 0.00 0.00 0.00 3.55
69 70 2.355756 CGACTAAATTGGGCTCATGGTG 59.644 50.000 0.00 0.00 0.00 4.17
70 71 3.356290 GACTAAATTGGGCTCATGGTGT 58.644 45.455 0.00 0.00 0.00 4.16
71 72 3.356290 ACTAAATTGGGCTCATGGTGTC 58.644 45.455 0.00 0.00 0.00 3.67
72 73 2.610438 AAATTGGGCTCATGGTGTCT 57.390 45.000 0.00 0.00 0.00 3.41
73 74 2.610438 AATTGGGCTCATGGTGTCTT 57.390 45.000 0.00 0.00 0.00 3.01
74 75 3.737559 AATTGGGCTCATGGTGTCTTA 57.262 42.857 0.00 0.00 0.00 2.10
75 76 3.959495 ATTGGGCTCATGGTGTCTTAT 57.041 42.857 0.00 0.00 0.00 1.73
76 77 3.737559 TTGGGCTCATGGTGTCTTATT 57.262 42.857 0.00 0.00 0.00 1.40
77 78 3.737559 TGGGCTCATGGTGTCTTATTT 57.262 42.857 0.00 0.00 0.00 1.40
78 79 4.046286 TGGGCTCATGGTGTCTTATTTT 57.954 40.909 0.00 0.00 0.00 1.82
79 80 4.415596 TGGGCTCATGGTGTCTTATTTTT 58.584 39.130 0.00 0.00 0.00 1.94
80 81 5.575157 TGGGCTCATGGTGTCTTATTTTTA 58.425 37.500 0.00 0.00 0.00 1.52
81 82 6.013379 TGGGCTCATGGTGTCTTATTTTTAA 58.987 36.000 0.00 0.00 0.00 1.52
82 83 6.667414 TGGGCTCATGGTGTCTTATTTTTAAT 59.333 34.615 0.00 0.00 0.00 1.40
83 84 7.180051 TGGGCTCATGGTGTCTTATTTTTAATT 59.820 33.333 0.00 0.00 0.00 1.40
84 85 8.040727 GGGCTCATGGTGTCTTATTTTTAATTT 58.959 33.333 0.00 0.00 0.00 1.82
114 115 6.698359 TTTTGCAGTACACAAAGTTGTTTC 57.302 33.333 12.17 0.00 39.91 2.78
115 116 5.378292 TTGCAGTACACAAAGTTGTTTCA 57.622 34.783 0.00 0.00 39.91 2.69
116 117 4.980590 TGCAGTACACAAAGTTGTTTCAG 58.019 39.130 0.00 0.00 39.91 3.02
117 118 4.142491 TGCAGTACACAAAGTTGTTTCAGG 60.142 41.667 0.00 0.00 39.91 3.86
118 119 4.351192 CAGTACACAAAGTTGTTTCAGGC 58.649 43.478 0.00 0.00 39.91 4.85
119 120 2.959507 ACACAAAGTTGTTTCAGGCC 57.040 45.000 0.00 0.00 39.91 5.19
120 121 2.175202 ACACAAAGTTGTTTCAGGCCA 58.825 42.857 5.01 0.00 39.91 5.36
121 122 2.765699 ACACAAAGTTGTTTCAGGCCAT 59.234 40.909 5.01 0.00 39.91 4.40
122 123 3.197549 ACACAAAGTTGTTTCAGGCCATT 59.802 39.130 5.01 0.00 39.91 3.16
123 124 4.190772 CACAAAGTTGTTTCAGGCCATTT 58.809 39.130 5.01 0.00 39.91 2.32
124 125 4.034279 CACAAAGTTGTTTCAGGCCATTTG 59.966 41.667 5.01 0.00 39.91 2.32
125 126 4.081198 ACAAAGTTGTTTCAGGCCATTTGA 60.081 37.500 5.01 0.00 38.47 2.69
126 127 4.751767 AAGTTGTTTCAGGCCATTTGAA 57.248 36.364 5.01 3.14 33.00 2.69
127 128 4.751767 AGTTGTTTCAGGCCATTTGAAA 57.248 36.364 13.17 13.17 41.00 2.69
128 129 5.096443 AGTTGTTTCAGGCCATTTGAAAA 57.904 34.783 17.52 7.96 43.76 2.29
129 130 5.495640 AGTTGTTTCAGGCCATTTGAAAAA 58.504 33.333 17.52 11.45 43.76 1.94
169 170 2.991434 TGAGAAGTGTCGTAGTCAGC 57.009 50.000 0.00 0.00 0.00 4.26
172 173 4.262617 TGAGAAGTGTCGTAGTCAGCTAT 58.737 43.478 0.00 0.00 0.00 2.97
219 2692 4.114794 GCAAAGCACAAGAAAATCACACT 58.885 39.130 0.00 0.00 0.00 3.55
307 2780 8.955061 ATAATATAGTAAAAATGCAAGCGCTG 57.045 30.769 12.58 6.58 39.64 5.18
308 2781 4.963276 ATAGTAAAAATGCAAGCGCTGA 57.037 36.364 12.58 0.00 39.64 4.26
309 2782 3.641437 AGTAAAAATGCAAGCGCTGAA 57.359 38.095 12.58 0.00 39.64 3.02
310 2783 3.976169 AGTAAAAATGCAAGCGCTGAAA 58.024 36.364 12.58 0.00 39.64 2.69
311 2784 3.983344 AGTAAAAATGCAAGCGCTGAAAG 59.017 39.130 12.58 2.38 39.64 2.62
312 2785 2.514205 AAAATGCAAGCGCTGAAAGT 57.486 40.000 12.58 0.00 39.64 2.66
320 2793 2.099062 CGCTGAAAGTGCATCGCC 59.901 61.111 0.00 0.00 37.80 5.54
321 2794 2.099062 GCTGAAAGTGCATCGCCG 59.901 61.111 0.00 0.00 35.30 6.46
322 2795 2.787249 CTGAAAGTGCATCGCCGG 59.213 61.111 0.00 0.00 0.00 6.13
323 2796 1.741401 CTGAAAGTGCATCGCCGGA 60.741 57.895 5.05 0.00 0.00 5.14
324 2797 1.298157 CTGAAAGTGCATCGCCGGAA 61.298 55.000 5.05 0.00 0.00 4.30
325 2798 0.886938 TGAAAGTGCATCGCCGGAAA 60.887 50.000 5.05 0.00 0.00 3.13
326 2799 0.451783 GAAAGTGCATCGCCGGAAAT 59.548 50.000 5.05 0.00 0.00 2.17
327 2800 0.451783 AAAGTGCATCGCCGGAAATC 59.548 50.000 5.05 0.00 0.00 2.17
328 2801 0.392998 AAGTGCATCGCCGGAAATCT 60.393 50.000 5.05 0.00 0.00 2.40
329 2802 0.392998 AGTGCATCGCCGGAAATCTT 60.393 50.000 5.05 0.00 0.00 2.40
330 2803 1.134521 AGTGCATCGCCGGAAATCTTA 60.135 47.619 5.05 0.00 0.00 2.10
331 2804 1.668751 GTGCATCGCCGGAAATCTTAA 59.331 47.619 5.05 0.00 0.00 1.85
332 2805 2.096819 GTGCATCGCCGGAAATCTTAAA 59.903 45.455 5.05 0.00 0.00 1.52
333 2806 2.750166 TGCATCGCCGGAAATCTTAAAA 59.250 40.909 5.05 0.00 0.00 1.52
334 2807 3.380004 TGCATCGCCGGAAATCTTAAAAT 59.620 39.130 5.05 0.00 0.00 1.82
335 2808 4.576873 TGCATCGCCGGAAATCTTAAAATA 59.423 37.500 5.05 0.00 0.00 1.40
336 2809 5.066634 TGCATCGCCGGAAATCTTAAAATAA 59.933 36.000 5.05 0.00 0.00 1.40
337 2810 5.974751 GCATCGCCGGAAATCTTAAAATAAA 59.025 36.000 5.05 0.00 0.00 1.40
338 2811 6.640907 GCATCGCCGGAAATCTTAAAATAAAT 59.359 34.615 5.05 0.00 0.00 1.40
339 2812 7.169140 GCATCGCCGGAAATCTTAAAATAAATT 59.831 33.333 5.05 0.00 0.00 1.82
340 2813 8.690840 CATCGCCGGAAATCTTAAAATAAATTC 58.309 33.333 5.05 0.00 0.00 2.17
341 2814 7.763356 TCGCCGGAAATCTTAAAATAAATTCA 58.237 30.769 5.05 0.00 0.00 2.57
342 2815 8.244802 TCGCCGGAAATCTTAAAATAAATTCAA 58.755 29.630 5.05 0.00 0.00 2.69
343 2816 8.318167 CGCCGGAAATCTTAAAATAAATTCAAC 58.682 33.333 5.05 0.00 0.00 3.18
344 2817 9.145865 GCCGGAAATCTTAAAATAAATTCAACA 57.854 29.630 5.05 0.00 0.00 3.33
360 2833 7.789273 AATTCAACAACAATGCAGAAATTGA 57.211 28.000 4.82 1.49 39.46 2.57
361 2834 7.789273 ATTCAACAACAATGCAGAAATTGAA 57.211 28.000 12.91 12.91 39.46 2.69
362 2835 7.789273 TTCAACAACAATGCAGAAATTGAAT 57.211 28.000 4.82 0.00 39.46 2.57
363 2836 7.789273 TCAACAACAATGCAGAAATTGAATT 57.211 28.000 4.82 0.00 39.46 2.17
364 2837 7.853524 TCAACAACAATGCAGAAATTGAATTC 58.146 30.769 4.82 0.00 39.46 2.17
365 2838 7.711772 TCAACAACAATGCAGAAATTGAATTCT 59.288 29.630 7.05 0.00 39.46 2.40
386 2859 5.853936 TCTGATGAATTAGGAATACCACCG 58.146 41.667 0.00 0.00 38.94 4.94
387 2860 5.365605 TCTGATGAATTAGGAATACCACCGT 59.634 40.000 0.00 0.00 38.94 4.83
388 2861 5.607477 TGATGAATTAGGAATACCACCGTC 58.393 41.667 0.00 0.00 38.94 4.79
389 2862 5.365605 TGATGAATTAGGAATACCACCGTCT 59.634 40.000 0.00 0.00 38.94 4.18
390 2863 5.272283 TGAATTAGGAATACCACCGTCTC 57.728 43.478 0.00 0.00 38.94 3.36
391 2864 4.960469 TGAATTAGGAATACCACCGTCTCT 59.040 41.667 0.00 0.00 38.94 3.10
392 2865 5.068723 TGAATTAGGAATACCACCGTCTCTC 59.931 44.000 0.00 0.00 38.94 3.20
393 2866 2.830651 AGGAATACCACCGTCTCTCT 57.169 50.000 0.00 0.00 38.94 3.10
394 2867 3.947612 AGGAATACCACCGTCTCTCTA 57.052 47.619 0.00 0.00 38.94 2.43
395 2868 4.246712 AGGAATACCACCGTCTCTCTAA 57.753 45.455 0.00 0.00 38.94 2.10
396 2869 4.805744 AGGAATACCACCGTCTCTCTAAT 58.194 43.478 0.00 0.00 38.94 1.73
397 2870 5.950023 AGGAATACCACCGTCTCTCTAATA 58.050 41.667 0.00 0.00 38.94 0.98
398 2871 6.371278 AGGAATACCACCGTCTCTCTAATAA 58.629 40.000 0.00 0.00 38.94 1.40
399 2872 7.011382 AGGAATACCACCGTCTCTCTAATAAT 58.989 38.462 0.00 0.00 38.94 1.28
400 2873 8.168725 AGGAATACCACCGTCTCTCTAATAATA 58.831 37.037 0.00 0.00 38.94 0.98
401 2874 8.968969 GGAATACCACCGTCTCTCTAATAATAT 58.031 37.037 0.00 0.00 35.97 1.28
405 2878 8.120140 ACCACCGTCTCTCTAATAATATAACC 57.880 38.462 0.00 0.00 0.00 2.85
406 2879 7.727186 ACCACCGTCTCTCTAATAATATAACCA 59.273 37.037 0.00 0.00 0.00 3.67
407 2880 8.750298 CCACCGTCTCTCTAATAATATAACCAT 58.250 37.037 0.00 0.00 0.00 3.55
435 2908 8.735692 ATTGGTTCATGAAAAACAATCAAACT 57.264 26.923 20.11 6.52 41.56 2.66
436 2909 9.829507 ATTGGTTCATGAAAAACAATCAAACTA 57.170 25.926 20.11 0.00 41.56 2.24
437 2910 9.658799 TTGGTTCATGAAAAACAATCAAACTAA 57.341 25.926 10.35 0.00 31.06 2.24
438 2911 9.658799 TGGTTCATGAAAAACAATCAAACTAAA 57.341 25.926 10.35 0.00 0.00 1.85
459 2932 9.825972 ACTAAAATCACATTTGAATAGTCAACG 57.174 29.630 4.86 2.67 43.52 4.10
460 2933 9.277565 CTAAAATCACATTTGAATAGTCAACGG 57.722 33.333 4.86 3.44 43.52 4.44
461 2934 4.678509 TCACATTTGAATAGTCAACGGC 57.321 40.909 4.86 0.00 43.52 5.68
462 2935 4.323417 TCACATTTGAATAGTCAACGGCT 58.677 39.130 4.86 0.00 43.52 5.52
463 2936 4.759693 TCACATTTGAATAGTCAACGGCTT 59.240 37.500 4.86 0.00 43.52 4.35
464 2937 5.935206 TCACATTTGAATAGTCAACGGCTTA 59.065 36.000 4.86 0.00 43.52 3.09
465 2938 6.092122 TCACATTTGAATAGTCAACGGCTTAG 59.908 38.462 4.86 0.00 43.52 2.18
466 2939 6.092122 CACATTTGAATAGTCAACGGCTTAGA 59.908 38.462 4.86 0.00 43.52 2.10
467 2940 6.823689 ACATTTGAATAGTCAACGGCTTAGAT 59.176 34.615 4.86 0.00 43.52 1.98
468 2941 7.336931 ACATTTGAATAGTCAACGGCTTAGATT 59.663 33.333 4.86 0.00 43.52 2.40
469 2942 6.662414 TTGAATAGTCAACGGCTTAGATTG 57.338 37.500 0.56 0.00 38.88 2.67
470 2943 5.116180 TGAATAGTCAACGGCTTAGATTGG 58.884 41.667 0.00 0.00 0.00 3.16
471 2944 4.755266 ATAGTCAACGGCTTAGATTGGT 57.245 40.909 0.00 0.00 0.00 3.67
472 2945 3.418684 AGTCAACGGCTTAGATTGGTT 57.581 42.857 0.00 0.00 0.00 3.67
473 2946 3.335579 AGTCAACGGCTTAGATTGGTTC 58.664 45.455 0.00 0.00 0.00 3.62
474 2947 3.071479 GTCAACGGCTTAGATTGGTTCA 58.929 45.455 0.00 0.00 0.00 3.18
475 2948 3.689649 GTCAACGGCTTAGATTGGTTCAT 59.310 43.478 0.00 0.00 0.00 2.57
476 2949 3.689161 TCAACGGCTTAGATTGGTTCATG 59.311 43.478 0.00 0.00 0.00 3.07
477 2950 2.017049 ACGGCTTAGATTGGTTCATGC 58.983 47.619 0.00 0.00 0.00 4.06
478 2951 2.016318 CGGCTTAGATTGGTTCATGCA 58.984 47.619 0.00 0.00 0.00 3.96
479 2952 2.423185 CGGCTTAGATTGGTTCATGCAA 59.577 45.455 0.00 0.00 0.00 4.08
480 2953 3.119531 CGGCTTAGATTGGTTCATGCAAA 60.120 43.478 0.00 0.00 0.00 3.68
481 2954 4.617995 CGGCTTAGATTGGTTCATGCAAAA 60.618 41.667 0.00 0.00 0.00 2.44
482 2955 4.627035 GGCTTAGATTGGTTCATGCAAAAC 59.373 41.667 6.76 6.76 0.00 2.43
483 2956 5.229423 GCTTAGATTGGTTCATGCAAAACA 58.771 37.500 14.92 1.50 0.00 2.83
484 2957 5.695816 GCTTAGATTGGTTCATGCAAAACAA 59.304 36.000 14.92 10.20 39.96 2.83
485 2958 6.369615 GCTTAGATTGGTTCATGCAAAACAAT 59.630 34.615 13.03 13.03 46.53 2.71
489 2962 6.939132 ATTGGTTCATGCAAAACAATCAAA 57.061 29.167 8.32 0.93 41.56 2.69
490 2963 5.731599 TGGTTCATGCAAAACAATCAAAC 57.268 34.783 14.92 0.19 0.00 2.93
491 2964 5.426504 TGGTTCATGCAAAACAATCAAACT 58.573 33.333 14.92 0.00 0.00 2.66
492 2965 6.577103 TGGTTCATGCAAAACAATCAAACTA 58.423 32.000 14.92 0.00 0.00 2.24
527 3000 2.742053 TCTGCTTTGAATAGTCAACGGC 59.258 45.455 17.58 17.58 43.52 5.68
531 3004 3.492313 CTTTGAATAGTCAACGGCTTGC 58.508 45.455 4.86 0.00 43.52 4.01
540 3013 2.841160 AACGGCTTGCGGTCAAACC 61.841 57.895 6.29 0.00 35.59 3.27
543 3016 2.193536 GGCTTGCGGTCAAACCACT 61.194 57.895 0.00 0.00 38.47 4.00
551 3024 0.242017 GGTCAAACCACTGCAGCATC 59.758 55.000 15.27 0.00 38.42 3.91
556 3029 4.100084 CCACTGCAGCATCCCGGA 62.100 66.667 15.27 0.00 0.00 5.14
575 3048 3.243643 CGGAAAAGAAAAACTGCAGCAAG 59.756 43.478 15.27 0.00 0.00 4.01
577 3050 2.229675 AAGAAAAACTGCAGCAAGCC 57.770 45.000 15.27 0.38 44.83 4.35
586 3059 3.264947 CAGCAAGCCTGTCAGCTG 58.735 61.111 7.63 7.63 44.11 4.24
591 3064 3.602513 AAGCCTGTCAGCTGCGGAG 62.603 63.158 9.47 0.00 44.11 4.63
593 3066 3.385384 CCTGTCAGCTGCGGAGGA 61.385 66.667 9.47 0.00 0.00 3.71
594 3067 2.729479 CCTGTCAGCTGCGGAGGAT 61.729 63.158 9.47 0.00 0.00 3.24
607 3080 2.704108 GAGGATCCGTCGTAGCAGA 58.296 57.895 5.98 0.00 0.00 4.26
608 3081 0.308376 GAGGATCCGTCGTAGCAGAC 59.692 60.000 5.98 0.00 37.76 3.51
642 3115 1.941975 CTTACCGTTGACCCACGTTTT 59.058 47.619 0.00 0.00 38.57 2.43
643 3116 1.297664 TACCGTTGACCCACGTTTTG 58.702 50.000 0.00 0.00 38.57 2.44
644 3117 1.298788 CCGTTGACCCACGTTTTGC 60.299 57.895 0.00 0.00 38.57 3.68
675 3161 1.066303 CACTGCTGCCCGTTAAAAACA 59.934 47.619 0.00 0.00 0.00 2.83
692 3183 6.370433 AAAAACAAAGAGAGAGAGAAGTGC 57.630 37.500 0.00 0.00 0.00 4.40
708 3199 0.602905 GTGCAAGTACGCCTTCCACT 60.603 55.000 3.01 0.00 38.57 4.00
741 3232 3.546002 CGAAATACGCCTTCCACAAAA 57.454 42.857 0.00 0.00 34.51 2.44
744 3235 1.541379 ATACGCCTTCCACAAAACCC 58.459 50.000 0.00 0.00 0.00 4.11
746 3237 2.570284 CGCCTTCCACAAAACCCCC 61.570 63.158 0.00 0.00 0.00 5.40
774 3265 4.106925 GGTCCAGCCCAGCTCCAG 62.107 72.222 0.00 0.00 36.40 3.86
775 3266 3.005539 GTCCAGCCCAGCTCCAGA 61.006 66.667 0.00 0.00 36.40 3.86
776 3267 2.203983 TCCAGCCCAGCTCCAGAA 60.204 61.111 0.00 0.00 36.40 3.02
777 3268 1.847506 TCCAGCCCAGCTCCAGAAA 60.848 57.895 0.00 0.00 36.40 2.52
923 3414 3.023591 GCCGCCAAACGCAGTCTAC 62.024 63.158 0.00 0.00 45.00 2.59
1389 3900 1.979693 GACTGAGGAGGAGGTGCGT 60.980 63.158 0.00 0.00 0.00 5.24
1410 3921 0.460987 CCAACGATCAGAGGCAGGAC 60.461 60.000 0.00 0.00 0.00 3.85
1459 3970 6.333416 CCTCTCTGATTCGTGAATTGTCTTA 58.667 40.000 0.00 0.00 0.00 2.10
1507 4018 3.944015 ACTGATCAGCTTCATTGCCTTAC 59.056 43.478 22.83 0.00 0.00 2.34
1668 4187 0.458669 GGCTGCCAAAGGATCATGTG 59.541 55.000 15.17 0.00 0.00 3.21
1719 4238 1.542915 ACAGTCATGCCTGCATTTGTC 59.457 47.619 3.09 0.00 35.83 3.18
1733 4252 2.941891 TTTGTCGTCAATCTCGTTGC 57.058 45.000 0.00 0.00 37.74 4.17
1770 4289 1.677300 TGGGTTCGCGCCATTCATT 60.677 52.632 0.00 0.00 0.00 2.57
1791 4310 4.946478 TGGAAATGAACCGGTGAAATTT 57.054 36.364 8.52 14.72 0.00 1.82
1922 4441 2.102070 AATTGGACGTGCGGTTATCA 57.898 45.000 1.60 0.00 0.00 2.15
1927 4446 0.638746 GACGTGCGGTTATCACTTCG 59.361 55.000 0.00 0.00 32.54 3.79
1996 4515 2.159114 AGCAATTTTTGGCGACACTGTT 60.159 40.909 0.00 0.00 42.67 3.16
2064 4592 2.154462 CTCACGACCAATTTTCAGGCT 58.846 47.619 0.00 0.00 0.00 4.58
2106 4635 1.400494 GCAAGTGTTTCACCTGTCGTT 59.600 47.619 0.00 0.00 34.49 3.85
2107 4636 2.791158 GCAAGTGTTTCACCTGTCGTTG 60.791 50.000 0.00 0.00 34.49 4.10
2108 4637 2.396590 AGTGTTTCACCTGTCGTTGT 57.603 45.000 0.00 0.00 34.49 3.32
2109 4638 3.530265 AGTGTTTCACCTGTCGTTGTA 57.470 42.857 0.00 0.00 34.49 2.41
2110 4639 3.864243 AGTGTTTCACCTGTCGTTGTAA 58.136 40.909 0.00 0.00 34.49 2.41
2111 4640 4.255301 AGTGTTTCACCTGTCGTTGTAAA 58.745 39.130 0.00 0.00 34.49 2.01
2112 4641 4.093850 AGTGTTTCACCTGTCGTTGTAAAC 59.906 41.667 0.00 0.00 38.15 2.01
2113 4642 4.093850 GTGTTTCACCTGTCGTTGTAAACT 59.906 41.667 0.00 0.00 46.99 2.66
2778 5327 0.884514 GCCTTGGAACTTCTCTTGGC 59.115 55.000 0.00 0.00 0.00 4.52
3033 5638 6.920758 TCTCCATTTACATTTTTGTTTGTCCG 59.079 34.615 0.00 0.00 0.00 4.79
3187 5800 1.903183 AGGAGGGAACTGTAGTGAAGC 59.097 52.381 0.00 0.00 44.43 3.86
3378 5992 1.734465 GTAGGTGATGAAGCTGTGTGC 59.266 52.381 0.00 0.00 37.17 4.57
3545 6159 8.481492 TTCGTTCCATTATATAAGGTGTAGGA 57.519 34.615 6.40 2.14 0.00 2.94
3546 6160 8.118976 TCGTTCCATTATATAAGGTGTAGGAG 57.881 38.462 6.40 0.00 0.00 3.69
3548 6162 9.017509 CGTTCCATTATATAAGGTGTAGGAGTA 57.982 37.037 6.40 0.00 0.00 2.59
3600 6214 8.865090 TGGACTAAAATTCCATATTGTTGTTGT 58.135 29.630 0.00 0.00 38.28 3.32
3607 6221 8.729805 AATTCCATATTGTTGTTGTTGTTGTT 57.270 26.923 0.00 0.00 0.00 2.83
3608 6222 7.531280 TTCCATATTGTTGTTGTTGTTGTTG 57.469 32.000 0.00 0.00 0.00 3.33
3609 6223 6.634805 TCCATATTGTTGTTGTTGTTGTTGT 58.365 32.000 0.00 0.00 0.00 3.32
3611 6225 7.063898 TCCATATTGTTGTTGTTGTTGTTGTTG 59.936 33.333 0.00 0.00 0.00 3.33
3613 6227 6.610741 ATTGTTGTTGTTGTTGTTGTTGTT 57.389 29.167 0.00 0.00 0.00 2.83
3675 6321 0.390735 GCAAGGGCCAATTCTGCTTG 60.391 55.000 6.18 8.23 0.00 4.01
3793 6439 2.823154 TGCATGGATCATGGCATGTATG 59.177 45.455 25.62 22.76 41.64 2.39
4083 7340 9.197694 CTTTTCCTTGATTCGTATGTATCTAGG 57.802 37.037 19.26 19.26 42.26 3.02
4610 7970 8.772250 TCCAATATGGATCTAAATATCAGTCCC 58.228 37.037 0.00 0.00 42.67 4.46
4626 7986 5.455872 TCAGTCCCGAATCTAAGAGGTTAT 58.544 41.667 0.00 0.00 0.00 1.89
4708 8083 6.510746 TTTATCGTGATAAGACTGAATGCG 57.489 37.500 2.84 0.00 35.02 4.73
4879 8275 1.186200 TCTTCCCGGAGAGTCACATG 58.814 55.000 0.73 0.00 0.00 3.21
5177 8632 6.720112 ATTATGTTCATTGGCATAGCTGTT 57.280 33.333 0.00 0.00 0.00 3.16
5198 8656 8.853345 GCTGTTACTTGACAAATAATCATGTTG 58.147 33.333 0.00 0.00 36.29 3.33
5503 9017 3.685836 ACTTGTGGTTACTTTTGCGTC 57.314 42.857 0.00 0.00 0.00 5.19
5506 9020 3.684103 TGTGGTTACTTTTGCGTCAAG 57.316 42.857 0.00 0.00 0.00 3.02
5507 9021 3.271729 TGTGGTTACTTTTGCGTCAAGA 58.728 40.909 0.00 0.00 0.00 3.02
5508 9022 3.690139 TGTGGTTACTTTTGCGTCAAGAA 59.310 39.130 0.00 0.00 0.00 2.52
5509 9023 4.156190 TGTGGTTACTTTTGCGTCAAGAAA 59.844 37.500 0.00 0.00 0.00 2.52
5510 9024 4.497966 GTGGTTACTTTTGCGTCAAGAAAC 59.502 41.667 0.00 0.00 0.00 2.78
5511 9025 4.156190 TGGTTACTTTTGCGTCAAGAAACA 59.844 37.500 0.00 0.00 0.00 2.83
5512 9026 4.733405 GGTTACTTTTGCGTCAAGAAACAG 59.267 41.667 0.00 0.00 0.00 3.16
5513 9027 5.329493 GTTACTTTTGCGTCAAGAAACAGT 58.671 37.500 0.00 0.00 0.00 3.55
5514 9028 4.434713 ACTTTTGCGTCAAGAAACAGTT 57.565 36.364 0.00 0.00 0.00 3.16
5623 9714 5.362556 TCAGTTGCAAATAACTTCTGAGC 57.637 39.130 0.00 0.00 38.78 4.26
5646 10348 7.282585 AGCCATGACTAGTAATTAAATCAGCA 58.717 34.615 0.00 0.00 0.00 4.41
5718 10421 2.174854 AGGCTATAACCATTCCCCACAC 59.825 50.000 0.00 0.00 0.00 3.82
5784 10488 7.441890 TCATAGATCTTAACGACCTCAGATC 57.558 40.000 0.00 0.00 41.36 2.75
5796 10500 6.861329 CGACCTCAGATCGTAATATCATTG 57.139 41.667 0.00 0.00 34.84 2.82
5802 10506 9.914131 CCTCAGATCGTAATATCATTGTTCTTA 57.086 33.333 0.00 0.00 0.00 2.10
5804 10508 9.692749 TCAGATCGTAATATCATTGTTCTTACC 57.307 33.333 0.00 0.00 0.00 2.85
5805 10509 9.476202 CAGATCGTAATATCATTGTTCTTACCA 57.524 33.333 0.00 0.00 0.00 3.25
5819 10524 5.048364 TGTTCTTACCATGTTGCACAATACC 60.048 40.000 0.00 0.00 0.00 2.73
5820 10525 4.013728 TCTTACCATGTTGCACAATACCC 58.986 43.478 0.00 0.00 0.00 3.69
5821 10526 1.555967 ACCATGTTGCACAATACCCC 58.444 50.000 0.00 0.00 0.00 4.95
5825 10530 1.974343 GTTGCACAATACCCCGCCA 60.974 57.895 0.00 0.00 0.00 5.69
5840 10545 2.149578 CCGCCATTCCTCATGATTCTC 58.850 52.381 0.00 0.00 34.31 2.87
5999 10704 0.170339 CATACCGCAGACGACTGACA 59.830 55.000 19.07 0.29 46.03 3.58
6017 10722 2.036992 GACACAGGCTCTCCCATATCTG 59.963 54.545 0.00 0.00 35.39 2.90
6184 10909 5.551760 AAATCTGCGTCTTTAGTCCATTG 57.448 39.130 0.00 0.00 0.00 2.82
6185 10910 3.953712 TCTGCGTCTTTAGTCCATTGA 57.046 42.857 0.00 0.00 0.00 2.57
6194 10919 4.394920 TCTTTAGTCCATTGATTTCCGTGC 59.605 41.667 0.00 0.00 0.00 5.34
6284 11009 3.870419 GCAGTGAAACCTTGCAAAAATCA 59.130 39.130 0.00 0.14 37.80 2.57
6289 11014 6.258507 AGTGAAACCTTGCAAAAATCATTGAC 59.741 34.615 0.00 0.00 37.80 3.18
6412 11140 2.100749 TGTGTACGAGTATGATGCCCTG 59.899 50.000 0.00 0.00 0.00 4.45
6436 11164 2.424705 TAACCCGTGGCGTCAGTGTC 62.425 60.000 0.00 0.00 0.00 3.67
6437 11165 3.991051 CCCGTGGCGTCAGTGTCT 61.991 66.667 0.00 0.00 0.00 3.41
6438 11166 2.632544 CCCGTGGCGTCAGTGTCTA 61.633 63.158 0.00 0.00 0.00 2.59
6472 11200 0.466372 TTGAATGTGCCGTGGTTGGA 60.466 50.000 0.00 0.00 0.00 3.53
6498 11226 4.569943 GTGTCTCCTTTGATAGAGCAACA 58.430 43.478 0.00 0.00 0.00 3.33
6514 11242 3.753272 AGCAACATACACATCCAGTTCAC 59.247 43.478 0.00 0.00 0.00 3.18
6516 11244 3.350219 ACATACACATCCAGTTCACCC 57.650 47.619 0.00 0.00 0.00 4.61
6520 11248 1.494721 ACACATCCAGTTCACCCAAGT 59.505 47.619 0.00 0.00 0.00 3.16
6564 11295 4.229876 GGATGTCTTTGCACTTGCTTTAC 58.770 43.478 2.33 0.00 42.66 2.01
6574 11305 4.695455 TGCACTTGCTTTACTTCATACTCC 59.305 41.667 2.33 0.00 42.66 3.85
6630 11365 2.663279 AACAGCTTGCTAAAACGACG 57.337 45.000 0.00 0.00 0.00 5.12
6647 11382 6.642683 AACGACGTATATTTTGGAACAGAG 57.357 37.500 0.00 0.00 42.39 3.35
6688 11423 5.133221 AGCTGGTGAAAAGACAACATACTT 58.867 37.500 0.00 0.00 36.86 2.24
6689 11424 5.239525 AGCTGGTGAAAAGACAACATACTTC 59.760 40.000 0.00 0.00 36.86 3.01
6695 11430 7.094805 GGTGAAAAGACAACATACTTCATAGCA 60.095 37.037 0.00 0.00 0.00 3.49
6711 11472 6.942532 TCATAGCATTTTGATTGGTAGGAC 57.057 37.500 0.00 0.00 34.22 3.85
6716 11477 4.394920 GCATTTTGATTGGTAGGACTCGAA 59.605 41.667 0.00 0.00 0.00 3.71
6769 12694 3.057315 GGTTCACCATGGATGAAACACAG 60.057 47.826 26.78 5.64 42.32 3.66
6797 12722 3.499737 CAATGCAGCCCGACGACC 61.500 66.667 0.00 0.00 0.00 4.79
6798 12723 4.015406 AATGCAGCCCGACGACCA 62.015 61.111 0.00 0.00 0.00 4.02
6816 12741 2.066262 CCAAGTGCGATTCGTAACACT 58.934 47.619 8.03 9.60 44.96 3.55
6817 12742 3.247442 CCAAGTGCGATTCGTAACACTA 58.753 45.455 15.14 0.00 42.34 2.74
6818 12743 3.303495 CCAAGTGCGATTCGTAACACTAG 59.697 47.826 15.14 8.62 42.34 2.57
6819 12744 2.527100 AGTGCGATTCGTAACACTAGC 58.473 47.619 13.76 0.00 41.41 3.42
6820 12745 2.163815 AGTGCGATTCGTAACACTAGCT 59.836 45.455 13.76 0.00 41.41 3.32
6821 12746 3.376234 AGTGCGATTCGTAACACTAGCTA 59.624 43.478 13.76 0.00 41.41 3.32
6822 12747 3.724751 GTGCGATTCGTAACACTAGCTAG 59.275 47.826 19.44 19.44 0.00 3.42
6823 12748 3.376234 TGCGATTCGTAACACTAGCTAGT 59.624 43.478 20.95 20.95 36.90 2.57
6824 12749 4.571984 TGCGATTCGTAACACTAGCTAGTA 59.428 41.667 25.63 8.44 34.13 1.82
6825 12750 4.903016 GCGATTCGTAACACTAGCTAGTAC 59.097 45.833 25.63 18.68 34.13 2.73
6827 12752 5.276584 CGATTCGTAACACTAGCTAGTACGT 60.277 44.000 31.58 22.62 37.20 3.57
6828 12753 6.074835 CGATTCGTAACACTAGCTAGTACGTA 60.075 42.308 31.58 26.72 37.20 3.57
6829 12754 6.575083 TTCGTAACACTAGCTAGTACGTAG 57.425 41.667 31.58 20.96 37.20 3.51
6831 12756 6.792326 TCGTAACACTAGCTAGTACGTAGTA 58.208 40.000 31.58 18.75 45.11 1.82
6842 12768 0.452987 TACGTAGTAGGCAGCAACGG 59.547 55.000 0.00 0.00 45.11 4.44
6845 12771 1.854227 GTAGTAGGCAGCAACGGATC 58.146 55.000 0.00 0.00 0.00 3.36
6858 12784 5.176406 CAGCAACGGATCATTACTGTATCTG 59.824 44.000 0.00 0.00 33.16 2.90
6876 12802 1.203052 CTGGGTGTAAATGCAGGCTTG 59.797 52.381 0.00 0.00 0.00 4.01
6880 12806 2.159198 GGTGTAAATGCAGGCTTGGATG 60.159 50.000 2.96 0.00 35.34 3.51
6890 12816 3.445096 GCAGGCTTGGATGTTGATAGTTT 59.555 43.478 0.00 0.00 0.00 2.66
6892 12818 4.946157 CAGGCTTGGATGTTGATAGTTTCT 59.054 41.667 0.00 0.00 0.00 2.52
6939 12865 1.376037 GGAGGAACTGGAAGCGGTG 60.376 63.158 0.00 0.00 41.55 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.035004 GGCATGTATGATAAGCAACTTTTGAA 58.965 34.615 0.00 0.00 0.00 2.69
3 4 6.152492 TGGCATGTATGATAAGCAACTTTTGA 59.848 34.615 0.00 0.00 0.00 2.69
9 10 5.217393 CACATGGCATGTATGATAAGCAAC 58.783 41.667 30.96 0.00 42.70 4.17
10 11 4.278919 CCACATGGCATGTATGATAAGCAA 59.721 41.667 30.96 0.00 42.70 3.91
11 12 3.822167 CCACATGGCATGTATGATAAGCA 59.178 43.478 30.96 0.00 42.70 3.91
12 13 3.822735 ACCACATGGCATGTATGATAAGC 59.177 43.478 30.96 0.00 42.70 3.09
13 14 4.152938 CGACCACATGGCATGTATGATAAG 59.847 45.833 30.96 17.18 42.70 1.73
15 16 3.556843 CCGACCACATGGCATGTATGATA 60.557 47.826 30.96 0.00 42.70 2.15
17 18 1.474855 CCGACCACATGGCATGTATGA 60.475 52.381 30.96 0.00 42.70 2.15
18 19 0.946528 CCGACCACATGGCATGTATG 59.053 55.000 30.96 25.38 42.70 2.39
19 20 0.836606 TCCGACCACATGGCATGTAT 59.163 50.000 30.96 22.21 42.70 2.29
20 21 0.107897 GTCCGACCACATGGCATGTA 60.108 55.000 30.96 13.32 42.70 2.29
22 23 2.114670 GGTCCGACCACATGGCATG 61.115 63.158 25.31 25.31 38.42 4.06
23 24 2.272146 GGTCCGACCACATGGCAT 59.728 61.111 13.05 0.00 38.42 4.40
27 28 2.815211 CTGCGGTCCGACCACATG 60.815 66.667 17.49 2.23 38.47 3.21
28 29 4.760047 GCTGCGGTCCGACCACAT 62.760 66.667 17.49 0.00 38.47 3.21
36 37 2.807631 TTTAGTCGACGCTGCGGTCC 62.808 60.000 26.95 13.46 33.30 4.46
37 38 0.801067 ATTTAGTCGACGCTGCGGTC 60.801 55.000 26.95 18.59 0.00 4.79
38 39 0.389426 AATTTAGTCGACGCTGCGGT 60.389 50.000 26.95 11.85 0.00 5.68
39 40 0.025001 CAATTTAGTCGACGCTGCGG 59.975 55.000 26.95 9.56 0.00 5.69
40 41 0.025001 CCAATTTAGTCGACGCTGCG 59.975 55.000 21.91 21.91 0.00 5.18
41 42 0.373716 CCCAATTTAGTCGACGCTGC 59.626 55.000 10.46 0.00 0.00 5.25
42 43 0.373716 GCCCAATTTAGTCGACGCTG 59.626 55.000 10.46 4.35 0.00 5.18
43 44 0.249398 AGCCCAATTTAGTCGACGCT 59.751 50.000 10.46 7.21 0.00 5.07
44 45 0.651031 GAGCCCAATTTAGTCGACGC 59.349 55.000 10.46 4.76 0.00 5.19
45 46 2.004583 TGAGCCCAATTTAGTCGACG 57.995 50.000 10.46 0.00 0.00 5.12
46 47 2.614057 CCATGAGCCCAATTTAGTCGAC 59.386 50.000 7.70 7.70 0.00 4.20
47 48 2.238646 ACCATGAGCCCAATTTAGTCGA 59.761 45.455 0.00 0.00 0.00 4.20
48 49 2.355756 CACCATGAGCCCAATTTAGTCG 59.644 50.000 0.00 0.00 0.00 4.18
49 50 3.356290 ACACCATGAGCCCAATTTAGTC 58.644 45.455 0.00 0.00 0.00 2.59
50 51 3.010584 AGACACCATGAGCCCAATTTAGT 59.989 43.478 0.00 0.00 0.00 2.24
51 52 3.624777 AGACACCATGAGCCCAATTTAG 58.375 45.455 0.00 0.00 0.00 1.85
52 53 3.737559 AGACACCATGAGCCCAATTTA 57.262 42.857 0.00 0.00 0.00 1.40
53 54 2.610438 AGACACCATGAGCCCAATTT 57.390 45.000 0.00 0.00 0.00 1.82
54 55 2.610438 AAGACACCATGAGCCCAATT 57.390 45.000 0.00 0.00 0.00 2.32
55 56 3.959495 ATAAGACACCATGAGCCCAAT 57.041 42.857 0.00 0.00 0.00 3.16
56 57 3.737559 AATAAGACACCATGAGCCCAA 57.262 42.857 0.00 0.00 0.00 4.12
57 58 3.737559 AAATAAGACACCATGAGCCCA 57.262 42.857 0.00 0.00 0.00 5.36
58 59 6.524101 TTAAAAATAAGACACCATGAGCCC 57.476 37.500 0.00 0.00 0.00 5.19
90 91 6.701841 TGAAACAACTTTGTGTACTGCAAAAA 59.298 30.769 13.99 0.00 41.31 1.94
91 92 6.216569 TGAAACAACTTTGTGTACTGCAAAA 58.783 32.000 13.99 1.88 41.31 2.44
92 93 5.773575 TGAAACAACTTTGTGTACTGCAAA 58.226 33.333 12.94 12.94 41.31 3.68
93 94 5.378292 TGAAACAACTTTGTGTACTGCAA 57.622 34.783 0.00 0.00 41.31 4.08
94 95 4.142491 CCTGAAACAACTTTGTGTACTGCA 60.142 41.667 0.00 0.00 41.31 4.41
95 96 4.351192 CCTGAAACAACTTTGTGTACTGC 58.649 43.478 0.00 0.00 41.31 4.40
96 97 4.351192 GCCTGAAACAACTTTGTGTACTG 58.649 43.478 0.00 0.00 41.31 2.74
97 98 3.380320 GGCCTGAAACAACTTTGTGTACT 59.620 43.478 0.00 0.00 41.31 2.73
98 99 3.129638 TGGCCTGAAACAACTTTGTGTAC 59.870 43.478 3.32 0.00 41.31 2.90
99 100 3.357203 TGGCCTGAAACAACTTTGTGTA 58.643 40.909 3.32 0.00 41.31 2.90
100 101 2.175202 TGGCCTGAAACAACTTTGTGT 58.825 42.857 3.32 0.00 41.31 3.72
101 102 2.957491 TGGCCTGAAACAACTTTGTG 57.043 45.000 3.32 0.00 41.31 3.33
102 103 4.081198 TCAAATGGCCTGAAACAACTTTGT 60.081 37.500 3.32 0.00 44.72 2.83
103 104 4.440880 TCAAATGGCCTGAAACAACTTTG 58.559 39.130 3.32 0.83 0.00 2.77
104 105 4.751767 TCAAATGGCCTGAAACAACTTT 57.248 36.364 3.32 0.00 0.00 2.66
105 106 4.751767 TTCAAATGGCCTGAAACAACTT 57.248 36.364 3.32 0.00 29.93 2.66
106 107 4.751767 TTTCAAATGGCCTGAAACAACT 57.248 36.364 13.17 0.00 37.76 3.16
107 108 5.809719 TTTTTCAAATGGCCTGAAACAAC 57.190 34.783 16.03 0.00 41.32 3.32
134 135 9.683069 GACACTTCTCAATTCACATAAATTGTT 57.317 29.630 8.67 0.00 43.80 2.83
135 136 8.017373 CGACACTTCTCAATTCACATAAATTGT 58.983 33.333 8.67 0.00 43.80 2.71
136 137 8.017373 ACGACACTTCTCAATTCACATAAATTG 58.983 33.333 0.00 3.53 44.42 2.32
137 138 8.099364 ACGACACTTCTCAATTCACATAAATT 57.901 30.769 0.00 0.00 0.00 1.82
138 139 7.672983 ACGACACTTCTCAATTCACATAAAT 57.327 32.000 0.00 0.00 0.00 1.40
139 140 7.870954 ACTACGACACTTCTCAATTCACATAAA 59.129 33.333 0.00 0.00 0.00 1.40
140 141 7.375834 ACTACGACACTTCTCAATTCACATAA 58.624 34.615 0.00 0.00 0.00 1.90
141 142 6.920817 ACTACGACACTTCTCAATTCACATA 58.079 36.000 0.00 0.00 0.00 2.29
142 143 5.784177 ACTACGACACTTCTCAATTCACAT 58.216 37.500 0.00 0.00 0.00 3.21
143 144 5.196341 ACTACGACACTTCTCAATTCACA 57.804 39.130 0.00 0.00 0.00 3.58
144 145 5.220381 TGACTACGACACTTCTCAATTCAC 58.780 41.667 0.00 0.00 0.00 3.18
145 146 5.447624 TGACTACGACACTTCTCAATTCA 57.552 39.130 0.00 0.00 0.00 2.57
146 147 4.324936 GCTGACTACGACACTTCTCAATTC 59.675 45.833 0.00 0.00 0.00 2.17
147 148 4.021894 AGCTGACTACGACACTTCTCAATT 60.022 41.667 0.00 0.00 0.00 2.32
148 149 3.508012 AGCTGACTACGACACTTCTCAAT 59.492 43.478 0.00 0.00 0.00 2.57
156 157 2.455032 CTGCATAGCTGACTACGACAC 58.545 52.381 0.00 0.00 0.00 3.67
169 170 1.371337 TTTGGCTCGCTGCTGCATAG 61.371 55.000 16.29 12.62 42.39 2.23
172 173 1.808531 AATTTTGGCTCGCTGCTGCA 61.809 50.000 16.29 0.88 42.39 4.41
177 178 3.126858 TGCTAGTAAATTTTGGCTCGCTG 59.873 43.478 0.00 0.00 0.00 5.18
178 179 3.343617 TGCTAGTAAATTTTGGCTCGCT 58.656 40.909 0.00 0.00 0.00 4.93
179 180 3.757745 TGCTAGTAAATTTTGGCTCGC 57.242 42.857 0.00 1.87 0.00 5.03
180 181 4.558860 GCTTTGCTAGTAAATTTTGGCTCG 59.441 41.667 6.45 0.00 0.00 5.03
181 182 5.346011 GTGCTTTGCTAGTAAATTTTGGCTC 59.654 40.000 6.45 4.11 0.00 4.70
182 183 5.221422 TGTGCTTTGCTAGTAAATTTTGGCT 60.221 36.000 6.45 0.00 0.00 4.75
282 2755 8.783093 TCAGCGCTTGCATTTTTACTATATTAT 58.217 29.630 7.50 0.00 42.66 1.28
283 2756 8.148807 TCAGCGCTTGCATTTTTACTATATTA 57.851 30.769 7.50 0.00 42.66 0.98
284 2757 7.026631 TCAGCGCTTGCATTTTTACTATATT 57.973 32.000 7.50 0.00 42.66 1.28
285 2758 6.618287 TCAGCGCTTGCATTTTTACTATAT 57.382 33.333 7.50 0.00 42.66 0.86
286 2759 6.429791 TTCAGCGCTTGCATTTTTACTATA 57.570 33.333 7.50 0.00 42.66 1.31
287 2760 4.963276 TCAGCGCTTGCATTTTTACTAT 57.037 36.364 7.50 0.00 42.66 2.12
288 2761 4.757799 TTCAGCGCTTGCATTTTTACTA 57.242 36.364 7.50 0.00 42.66 1.82
289 2762 3.641437 TTCAGCGCTTGCATTTTTACT 57.359 38.095 7.50 0.00 42.66 2.24
290 2763 3.735746 ACTTTCAGCGCTTGCATTTTTAC 59.264 39.130 7.50 0.00 42.66 2.01
291 2764 3.735240 CACTTTCAGCGCTTGCATTTTTA 59.265 39.130 7.50 0.00 42.66 1.52
292 2765 2.540931 CACTTTCAGCGCTTGCATTTTT 59.459 40.909 7.50 0.00 42.66 1.94
293 2766 2.129607 CACTTTCAGCGCTTGCATTTT 58.870 42.857 7.50 0.00 42.66 1.82
294 2767 1.774639 CACTTTCAGCGCTTGCATTT 58.225 45.000 7.50 0.00 42.66 2.32
295 2768 0.665369 GCACTTTCAGCGCTTGCATT 60.665 50.000 22.62 0.00 42.66 3.56
296 2769 1.080974 GCACTTTCAGCGCTTGCAT 60.081 52.632 22.62 0.00 42.66 3.96
297 2770 1.798234 ATGCACTTTCAGCGCTTGCA 61.798 50.000 29.62 29.62 46.59 4.08
298 2771 1.069378 GATGCACTTTCAGCGCTTGC 61.069 55.000 21.19 21.19 39.58 4.01
299 2772 0.791983 CGATGCACTTTCAGCGCTTG 60.792 55.000 7.50 3.93 39.02 4.01
300 2773 1.499056 CGATGCACTTTCAGCGCTT 59.501 52.632 7.50 0.00 39.02 4.68
301 2774 3.171987 CGATGCACTTTCAGCGCT 58.828 55.556 2.64 2.64 39.02 5.92
304 2777 2.099062 CGGCGATGCACTTTCAGC 59.901 61.111 0.00 0.00 0.00 4.26
305 2778 1.298157 TTCCGGCGATGCACTTTCAG 61.298 55.000 9.30 0.00 0.00 3.02
306 2779 0.886938 TTTCCGGCGATGCACTTTCA 60.887 50.000 9.30 0.00 0.00 2.69
307 2780 0.451783 ATTTCCGGCGATGCACTTTC 59.548 50.000 9.30 0.00 0.00 2.62
308 2781 0.451783 GATTTCCGGCGATGCACTTT 59.548 50.000 9.30 0.00 0.00 2.66
309 2782 0.392998 AGATTTCCGGCGATGCACTT 60.393 50.000 9.30 0.00 0.00 3.16
310 2783 0.392998 AAGATTTCCGGCGATGCACT 60.393 50.000 9.30 0.00 0.00 4.40
311 2784 1.295792 TAAGATTTCCGGCGATGCAC 58.704 50.000 9.30 0.00 0.00 4.57
312 2785 2.031258 TTAAGATTTCCGGCGATGCA 57.969 45.000 9.30 0.00 0.00 3.96
313 2786 3.414549 TTTTAAGATTTCCGGCGATGC 57.585 42.857 9.30 0.00 0.00 3.91
314 2787 8.574196 AATTTATTTTAAGATTTCCGGCGATG 57.426 30.769 9.30 0.00 0.00 3.84
315 2788 8.410141 TGAATTTATTTTAAGATTTCCGGCGAT 58.590 29.630 9.30 0.00 0.00 4.58
316 2789 7.763356 TGAATTTATTTTAAGATTTCCGGCGA 58.237 30.769 9.30 0.00 0.00 5.54
317 2790 7.979115 TGAATTTATTTTAAGATTTCCGGCG 57.021 32.000 0.00 0.00 0.00 6.46
318 2791 9.145865 TGTTGAATTTATTTTAAGATTTCCGGC 57.854 29.630 0.00 0.00 0.00 6.13
334 2807 9.322773 TCAATTTCTGCATTGTTGTTGAATTTA 57.677 25.926 0.00 0.00 35.86 1.40
335 2808 8.211116 TCAATTTCTGCATTGTTGTTGAATTT 57.789 26.923 0.00 0.00 35.86 1.82
336 2809 7.789273 TCAATTTCTGCATTGTTGTTGAATT 57.211 28.000 0.00 0.00 35.86 2.17
337 2810 7.789273 TTCAATTTCTGCATTGTTGTTGAAT 57.211 28.000 0.00 0.00 35.86 2.57
338 2811 7.789273 ATTCAATTTCTGCATTGTTGTTGAA 57.211 28.000 11.74 11.74 38.30 2.69
339 2812 7.711772 AGAATTCAATTTCTGCATTGTTGTTGA 59.288 29.630 8.44 0.00 34.68 3.18
340 2813 7.796660 CAGAATTCAATTTCTGCATTGTTGTTG 59.203 33.333 8.44 0.00 44.30 3.33
341 2814 7.857569 CAGAATTCAATTTCTGCATTGTTGTT 58.142 30.769 8.44 0.00 44.30 2.83
342 2815 7.416154 CAGAATTCAATTTCTGCATTGTTGT 57.584 32.000 8.44 0.00 44.30 3.32
361 2834 6.936900 CGGTGGTATTCCTAATTCATCAGAAT 59.063 38.462 0.00 0.00 39.18 2.40
362 2835 6.126883 ACGGTGGTATTCCTAATTCATCAGAA 60.127 38.462 0.00 0.00 34.75 3.02
363 2836 5.365605 ACGGTGGTATTCCTAATTCATCAGA 59.634 40.000 0.00 0.00 34.23 3.27
364 2837 5.611374 ACGGTGGTATTCCTAATTCATCAG 58.389 41.667 0.00 0.00 34.23 2.90
365 2838 5.365605 AGACGGTGGTATTCCTAATTCATCA 59.634 40.000 0.00 0.00 34.23 3.07
366 2839 5.855045 AGACGGTGGTATTCCTAATTCATC 58.145 41.667 0.00 0.00 34.23 2.92
367 2840 5.602978 AGAGACGGTGGTATTCCTAATTCAT 59.397 40.000 0.00 0.00 34.23 2.57
368 2841 4.960469 AGAGACGGTGGTATTCCTAATTCA 59.040 41.667 0.00 0.00 34.23 2.57
369 2842 5.302313 AGAGAGACGGTGGTATTCCTAATTC 59.698 44.000 0.00 0.00 34.23 2.17
370 2843 5.209659 AGAGAGACGGTGGTATTCCTAATT 58.790 41.667 0.00 0.00 34.23 1.40
371 2844 4.805744 AGAGAGACGGTGGTATTCCTAAT 58.194 43.478 0.00 0.00 34.23 1.73
372 2845 4.246712 AGAGAGACGGTGGTATTCCTAA 57.753 45.455 0.00 0.00 34.23 2.69
373 2846 3.947612 AGAGAGACGGTGGTATTCCTA 57.052 47.619 0.00 0.00 34.23 2.94
374 2847 2.830651 AGAGAGACGGTGGTATTCCT 57.169 50.000 0.00 0.00 34.23 3.36
375 2848 6.645790 TTATTAGAGAGACGGTGGTATTCC 57.354 41.667 0.00 0.00 0.00 3.01
379 2852 9.236006 GGTTATATTATTAGAGAGACGGTGGTA 57.764 37.037 0.00 0.00 0.00 3.25
380 2853 7.727186 TGGTTATATTATTAGAGAGACGGTGGT 59.273 37.037 0.00 0.00 0.00 4.16
381 2854 8.118976 TGGTTATATTATTAGAGAGACGGTGG 57.881 38.462 0.00 0.00 0.00 4.61
409 2882 9.829507 AGTTTGATTGTTTTTCATGAACCAATA 57.170 25.926 19.42 8.69 0.00 1.90
410 2883 8.735692 AGTTTGATTGTTTTTCATGAACCAAT 57.264 26.923 19.45 19.45 0.00 3.16
411 2884 9.658799 TTAGTTTGATTGTTTTTCATGAACCAA 57.341 25.926 7.89 11.60 0.00 3.67
412 2885 9.658799 TTTAGTTTGATTGTTTTTCATGAACCA 57.341 25.926 7.89 2.60 0.00 3.67
433 2906 9.825972 CGTTGACTATTCAAATGTGATTTTAGT 57.174 29.630 0.00 4.25 43.52 2.24
434 2907 9.277565 CCGTTGACTATTCAAATGTGATTTTAG 57.722 33.333 0.00 0.00 43.52 1.85
435 2908 7.753132 GCCGTTGACTATTCAAATGTGATTTTA 59.247 33.333 0.00 0.00 43.52 1.52
436 2909 6.586082 GCCGTTGACTATTCAAATGTGATTTT 59.414 34.615 0.00 0.00 43.52 1.82
437 2910 6.071952 AGCCGTTGACTATTCAAATGTGATTT 60.072 34.615 0.00 0.00 43.52 2.17
438 2911 5.415701 AGCCGTTGACTATTCAAATGTGATT 59.584 36.000 0.00 0.00 43.52 2.57
439 2912 4.943705 AGCCGTTGACTATTCAAATGTGAT 59.056 37.500 0.00 0.00 43.52 3.06
440 2913 4.323417 AGCCGTTGACTATTCAAATGTGA 58.677 39.130 0.00 0.00 43.52 3.58
441 2914 4.685169 AGCCGTTGACTATTCAAATGTG 57.315 40.909 0.00 0.00 43.52 3.21
442 2915 6.170506 TCTAAGCCGTTGACTATTCAAATGT 58.829 36.000 0.00 0.00 43.52 2.71
443 2916 6.662414 TCTAAGCCGTTGACTATTCAAATG 57.338 37.500 0.00 0.00 43.52 2.32
444 2917 7.201732 CCAATCTAAGCCGTTGACTATTCAAAT 60.202 37.037 0.00 0.00 43.52 2.32
445 2918 6.093495 CCAATCTAAGCCGTTGACTATTCAAA 59.907 38.462 0.00 0.00 43.52 2.69
446 2919 5.584649 CCAATCTAAGCCGTTGACTATTCAA 59.415 40.000 0.00 0.00 39.55 2.69
447 2920 5.116180 CCAATCTAAGCCGTTGACTATTCA 58.884 41.667 0.00 0.00 0.00 2.57
448 2921 5.116882 ACCAATCTAAGCCGTTGACTATTC 58.883 41.667 0.00 0.00 0.00 1.75
449 2922 5.099042 ACCAATCTAAGCCGTTGACTATT 57.901 39.130 0.00 0.00 0.00 1.73
450 2923 4.755266 ACCAATCTAAGCCGTTGACTAT 57.245 40.909 0.00 0.00 0.00 2.12
451 2924 4.020928 TGAACCAATCTAAGCCGTTGACTA 60.021 41.667 0.00 0.00 0.00 2.59
452 2925 3.244422 TGAACCAATCTAAGCCGTTGACT 60.244 43.478 0.00 0.00 0.00 3.41
453 2926 3.071479 TGAACCAATCTAAGCCGTTGAC 58.929 45.455 0.00 0.00 0.00 3.18
454 2927 3.410631 TGAACCAATCTAAGCCGTTGA 57.589 42.857 0.00 0.00 0.00 3.18
455 2928 3.731867 GCATGAACCAATCTAAGCCGTTG 60.732 47.826 0.00 0.00 0.00 4.10
456 2929 2.423538 GCATGAACCAATCTAAGCCGTT 59.576 45.455 0.00 0.00 0.00 4.44
457 2930 2.017049 GCATGAACCAATCTAAGCCGT 58.983 47.619 0.00 0.00 0.00 5.68
458 2931 2.016318 TGCATGAACCAATCTAAGCCG 58.984 47.619 0.00 0.00 0.00 5.52
459 2932 4.454728 TTTGCATGAACCAATCTAAGCC 57.545 40.909 0.00 0.00 0.00 4.35
460 2933 5.229423 TGTTTTGCATGAACCAATCTAAGC 58.771 37.500 0.00 0.00 0.00 3.09
461 2934 7.599621 TGATTGTTTTGCATGAACCAATCTAAG 59.400 33.333 17.22 0.00 32.31 2.18
462 2935 7.440198 TGATTGTTTTGCATGAACCAATCTAA 58.560 30.769 17.22 2.00 32.31 2.10
463 2936 6.990798 TGATTGTTTTGCATGAACCAATCTA 58.009 32.000 17.22 6.34 32.31 1.98
464 2937 5.856156 TGATTGTTTTGCATGAACCAATCT 58.144 33.333 17.22 0.00 32.31 2.40
465 2938 6.542574 TTGATTGTTTTGCATGAACCAATC 57.457 33.333 12.15 12.15 32.04 2.67
466 2939 6.543100 AGTTTGATTGTTTTGCATGAACCAAT 59.457 30.769 0.00 2.95 0.00 3.16
467 2940 5.879223 AGTTTGATTGTTTTGCATGAACCAA 59.121 32.000 0.00 0.00 0.00 3.67
468 2941 5.426504 AGTTTGATTGTTTTGCATGAACCA 58.573 33.333 0.00 1.49 0.00 3.67
469 2942 5.989551 AGTTTGATTGTTTTGCATGAACC 57.010 34.783 0.00 0.00 0.00 3.62
470 2943 9.934190 ATTTTAGTTTGATTGTTTTGCATGAAC 57.066 25.926 0.00 6.54 0.00 3.18
472 2945 9.322773 TGATTTTAGTTTGATTGTTTTGCATGA 57.677 25.926 0.00 0.00 0.00 3.07
473 2946 9.372541 GTGATTTTAGTTTGATTGTTTTGCATG 57.627 29.630 0.00 0.00 0.00 4.06
474 2947 9.107177 TGTGATTTTAGTTTGATTGTTTTGCAT 57.893 25.926 0.00 0.00 0.00 3.96
475 2948 8.484641 TGTGATTTTAGTTTGATTGTTTTGCA 57.515 26.923 0.00 0.00 0.00 4.08
476 2949 9.766277 TTTGTGATTTTAGTTTGATTGTTTTGC 57.234 25.926 0.00 0.00 0.00 3.68
484 2957 8.981647 GCAGATGTTTTGTGATTTTAGTTTGAT 58.018 29.630 0.00 0.00 0.00 2.57
485 2958 8.196771 AGCAGATGTTTTGTGATTTTAGTTTGA 58.803 29.630 0.00 0.00 0.00 2.69
486 2959 8.356533 AGCAGATGTTTTGTGATTTTAGTTTG 57.643 30.769 0.00 0.00 0.00 2.93
487 2960 8.947055 AAGCAGATGTTTTGTGATTTTAGTTT 57.053 26.923 0.00 0.00 0.00 2.66
488 2961 8.819974 CAAAGCAGATGTTTTGTGATTTTAGTT 58.180 29.630 12.39 0.00 40.06 2.24
489 2962 8.196771 TCAAAGCAGATGTTTTGTGATTTTAGT 58.803 29.630 17.89 0.00 43.63 2.24
490 2963 8.578308 TCAAAGCAGATGTTTTGTGATTTTAG 57.422 30.769 17.89 0.00 43.63 1.85
491 2964 8.939201 TTCAAAGCAGATGTTTTGTGATTTTA 57.061 26.923 17.89 0.00 43.63 1.52
492 2965 7.846644 TTCAAAGCAGATGTTTTGTGATTTT 57.153 28.000 17.89 0.00 43.63 1.82
509 2982 3.492313 CAAGCCGTTGACTATTCAAAGC 58.508 45.455 9.73 9.73 43.52 3.51
531 3004 1.518056 ATGCTGCAGTGGTTTGACCG 61.518 55.000 16.64 0.00 42.58 4.79
540 3013 1.243342 TTTTCCGGGATGCTGCAGTG 61.243 55.000 16.64 0.00 0.00 3.66
543 3016 0.251121 TTCTTTTCCGGGATGCTGCA 60.251 50.000 4.13 4.13 0.00 4.41
551 3024 2.742774 CTGCAGTTTTTCTTTTCCGGG 58.257 47.619 5.25 0.00 0.00 5.73
556 3029 2.938451 GGCTTGCTGCAGTTTTTCTTTT 59.062 40.909 16.64 0.00 45.15 2.27
577 3050 1.227205 GATCCTCCGCAGCTGACAG 60.227 63.158 20.43 8.96 0.00 3.51
600 3073 1.153823 ACGCATCCACGTCTGCTAC 60.154 57.895 11.25 0.00 44.43 3.58
601 3074 3.284336 ACGCATCCACGTCTGCTA 58.716 55.556 11.25 0.00 44.43 3.49
608 3081 2.202690 TAAGCGGACGCATCCACG 60.203 61.111 19.48 0.00 46.67 4.94
609 3082 2.171725 GGTAAGCGGACGCATCCAC 61.172 63.158 19.48 9.89 46.67 4.02
610 3083 2.185867 GGTAAGCGGACGCATCCA 59.814 61.111 19.48 0.00 46.67 3.41
611 3084 2.960129 CGGTAAGCGGACGCATCC 60.960 66.667 19.48 15.21 44.88 3.51
612 3085 1.808390 AACGGTAAGCGGACGCATC 60.808 57.895 19.48 8.16 44.88 3.91
613 3086 2.098233 CAACGGTAAGCGGACGCAT 61.098 57.895 19.48 9.71 44.88 4.73
642 3115 1.949133 GCAGTGACTGTTCGACGCA 60.949 57.895 14.82 0.00 33.43 5.24
643 3116 1.661821 AGCAGTGACTGTTCGACGC 60.662 57.895 14.82 0.00 33.43 5.19
644 3117 1.880601 GCAGCAGTGACTGTTCGACG 61.881 60.000 14.82 0.00 39.96 5.12
645 3118 1.560860 GGCAGCAGTGACTGTTCGAC 61.561 60.000 14.82 1.24 39.96 4.20
646 3119 1.300931 GGCAGCAGTGACTGTTCGA 60.301 57.895 14.82 0.00 39.96 3.71
647 3120 2.320587 GGGCAGCAGTGACTGTTCG 61.321 63.158 14.82 4.20 39.96 3.95
648 3121 2.320587 CGGGCAGCAGTGACTGTTC 61.321 63.158 14.82 3.62 39.96 3.18
652 3138 0.107831 TTTAACGGGCAGCAGTGACT 59.892 50.000 0.00 0.00 0.00 3.41
675 3161 4.953940 ACTTGCACTTCTCTCTCTCTTT 57.046 40.909 0.00 0.00 0.00 2.52
692 3183 3.982576 AAAAAGTGGAAGGCGTACTTG 57.017 42.857 0.00 0.00 40.21 3.16
746 3237 2.581354 CTGGACCGCTGGAGAAGG 59.419 66.667 1.50 0.00 0.00 3.46
747 3238 2.125350 GCTGGACCGCTGGAGAAG 60.125 66.667 1.50 0.00 0.00 2.85
772 3263 2.498167 CTGGACCAGTTCTGGTTTCTG 58.502 52.381 22.93 17.33 43.24 3.02
773 3264 1.202818 GCTGGACCAGTTCTGGTTTCT 60.203 52.381 22.93 2.93 43.24 2.52
774 3265 1.202818 AGCTGGACCAGTTCTGGTTTC 60.203 52.381 22.93 18.14 43.24 2.78
775 3266 0.846693 AGCTGGACCAGTTCTGGTTT 59.153 50.000 22.93 3.98 43.24 3.27
776 3267 0.109342 CAGCTGGACCAGTTCTGGTT 59.891 55.000 22.93 9.26 43.24 3.67
777 3268 1.757306 CAGCTGGACCAGTTCTGGT 59.243 57.895 22.38 22.38 46.40 4.00
810 3301 1.140407 GCGCGCGATTACAACTCTCT 61.140 55.000 37.18 0.00 0.00 3.10
923 3414 0.753848 GAAGAGAGAGAGGGGTCCGG 60.754 65.000 0.00 0.00 0.00 5.14
1084 3589 2.688299 GTGGGCGGGGTTAGGGTA 60.688 66.667 0.00 0.00 0.00 3.69
1207 3712 4.465446 CTCGGGCTGGGGAGGAGA 62.465 72.222 0.00 0.00 0.00 3.71
1266 3777 2.701780 CCCAGACCCAGACGACGAG 61.702 68.421 0.00 0.00 0.00 4.18
1321 3832 3.847602 CTCCCGCAGCCTCCTCAG 61.848 72.222 0.00 0.00 0.00 3.35
1410 3921 0.179145 ATTAAGCCGTCACCTCGTCG 60.179 55.000 0.00 0.00 0.00 5.12
1459 3970 4.021104 TGCTTCGCCATATACTGAATAGCT 60.021 41.667 0.00 0.00 0.00 3.32
1484 3995 2.641305 AGGCAATGAAGCTGATCAGTC 58.359 47.619 23.38 14.50 31.76 3.51
1486 3997 3.943381 TGTAAGGCAATGAAGCTGATCAG 59.057 43.478 18.84 18.84 31.76 2.90
1490 4001 6.832520 TTATTTGTAAGGCAATGAAGCTGA 57.167 33.333 0.00 0.00 36.89 4.26
1668 4187 1.502163 GCTCTCAGTGTGTGTGCACC 61.502 60.000 15.69 6.37 44.65 5.01
1719 4238 5.858475 AGAAATTTAGCAACGAGATTGACG 58.142 37.500 0.00 0.00 41.23 4.35
1733 4252 7.468631 CGAACCCACCCAATCATAGAAATTTAG 60.469 40.741 0.00 0.00 0.00 1.85
1770 4289 4.946478 AAATTTCACCGGTTCATTTCCA 57.054 36.364 2.97 0.00 0.00 3.53
1863 4382 6.190954 ACAAAATAAGAGTTAACGGCATCC 57.809 37.500 0.00 0.00 0.00 3.51
1927 4446 8.873215 TGGATTTAGATTCGATCAGACTTAAC 57.127 34.615 0.00 0.00 0.00 2.01
1996 4515 5.415701 GCCTTCCTTTCTATTCAACATGACA 59.584 40.000 0.00 0.00 0.00 3.58
2106 4635 7.495279 ACGTGAACCTGTAATTACAAGTTTACA 59.505 33.333 32.48 23.90 42.45 2.41
2107 4636 7.795272 CACGTGAACCTGTAATTACAAGTTTAC 59.205 37.037 28.36 28.36 40.01 2.01
2108 4637 7.518689 GCACGTGAACCTGTAATTACAAGTTTA 60.519 37.037 25.86 21.19 40.01 2.01
2109 4638 6.721321 CACGTGAACCTGTAATTACAAGTTT 58.279 36.000 25.86 16.14 40.01 2.66
2110 4639 5.277634 GCACGTGAACCTGTAATTACAAGTT 60.278 40.000 25.56 25.56 41.93 2.66
2111 4640 4.212636 GCACGTGAACCTGTAATTACAAGT 59.787 41.667 22.23 15.76 35.50 3.16
2112 4641 4.212425 TGCACGTGAACCTGTAATTACAAG 59.788 41.667 22.23 15.12 35.50 3.16
2113 4642 4.127907 TGCACGTGAACCTGTAATTACAA 58.872 39.130 22.23 1.45 35.50 2.41
2159 4691 0.108138 ACTGAGCCTTGCCGATACAC 60.108 55.000 0.00 0.00 0.00 2.90
2870 5456 5.069648 TGAGAACCTCTAACATGGCATCTAG 59.930 44.000 0.00 1.76 0.00 2.43
2904 5491 4.704540 TCACACAGAACAAGGACAAATTGT 59.295 37.500 0.00 0.00 42.55 2.71
3033 5638 5.046950 TGGGTGCCCTTAATTCAAATAACAC 60.047 40.000 8.91 0.00 36.94 3.32
3171 5784 1.002544 AGCAGCTTCACTACAGTTCCC 59.997 52.381 0.00 0.00 0.00 3.97
3187 5800 4.456911 ACATTTTGTATCAGGACACAGCAG 59.543 41.667 0.00 0.00 0.00 4.24
3378 5992 5.855395 GCAGAAGCTGAATAAACAACTTGAG 59.145 40.000 0.00 0.00 37.91 3.02
3477 6091 2.743183 GCATGTGAGATACAGTCCACCC 60.743 54.545 0.00 0.00 43.80 4.61
3582 6196 8.610896 CAACAACAACAACAACAATATGGAATT 58.389 29.630 0.00 0.00 0.00 2.17
3584 6198 7.099764 ACAACAACAACAACAACAATATGGAA 58.900 30.769 0.00 0.00 0.00 3.53
3586 6200 6.900568 ACAACAACAACAACAACAATATGG 57.099 33.333 0.00 0.00 0.00 2.74
3587 6201 7.737395 ACAACAACAACAACAACAACAATATG 58.263 30.769 0.00 0.00 0.00 1.78
3595 6209 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
3597 6211 6.040247 TGTACAACAACAACAACAACAACAA 58.960 32.000 0.00 0.00 0.00 2.83
3600 6214 5.635280 CCATGTACAACAACAACAACAACAA 59.365 36.000 0.00 0.00 32.02 2.83
3603 6217 5.184096 ACTCCATGTACAACAACAACAACAA 59.816 36.000 0.00 0.00 32.02 2.83
3605 6219 5.243426 ACTCCATGTACAACAACAACAAC 57.757 39.130 0.00 0.00 32.02 3.32
3607 6221 5.676552 ACTACTCCATGTACAACAACAACA 58.323 37.500 0.00 0.00 32.02 3.33
3608 6222 6.613755 AACTACTCCATGTACAACAACAAC 57.386 37.500 0.00 0.00 32.02 3.32
3609 6223 7.502696 AGTAACTACTCCATGTACAACAACAA 58.497 34.615 0.00 0.00 32.02 2.83
3611 6225 7.578169 GAGTAACTACTCCATGTACAACAAC 57.422 40.000 0.00 0.00 45.33 3.32
3656 6300 0.390735 CAAGCAGAATTGGCCCTTGC 60.391 55.000 0.00 2.90 0.00 4.01
3657 6301 0.390735 GCAAGCAGAATTGGCCCTTG 60.391 55.000 0.00 5.74 36.78 3.61
3675 6321 6.868339 ACTCCATGTAATTAACTTGCAAAAGC 59.132 34.615 0.00 0.00 32.93 3.51
4065 7313 6.590234 ATGTGCCTAGATACATACGAATCA 57.410 37.500 9.28 0.00 35.86 2.57
4083 7340 6.324819 AGTGAACATGCATACTAAAATGTGC 58.675 36.000 0.00 0.00 37.24 4.57
4206 7463 0.549950 CATGCCAGGATCCAAGAGGT 59.450 55.000 15.82 0.00 35.89 3.85
4380 7637 2.866762 GGCATGAACTTGTATCTCGTCC 59.133 50.000 0.00 0.00 0.00 4.79
4492 7846 0.548031 CCAAGGCCTATCAGCTTCCA 59.452 55.000 5.16 0.00 0.00 3.53
4610 7970 8.361139 AGAACACCATATAACCTCTTAGATTCG 58.639 37.037 0.00 0.00 0.00 3.34
4626 7986 5.482526 TCAAGCCTACAAGTAGAACACCATA 59.517 40.000 8.76 0.00 35.21 2.74
4879 8275 9.869757 AATAAAAGTTAGGATGCCAATAAACAC 57.130 29.630 0.00 0.00 0.00 3.32
5157 8612 5.195940 AGTAACAGCTATGCCAATGAACAT 58.804 37.500 0.00 0.00 0.00 2.71
5177 8632 8.575589 AGCAACAACATGATTATTTGTCAAGTA 58.424 29.630 0.00 0.00 32.24 2.24
5198 8656 0.890683 CAATCACCCCTGGAAGCAAC 59.109 55.000 0.00 0.00 0.00 4.17
5200 8658 0.251297 CACAATCACCCCTGGAAGCA 60.251 55.000 0.00 0.00 0.00 3.91
5623 9714 9.276590 TCATGCTGATTTAATTACTAGTCATGG 57.723 33.333 0.00 0.00 0.00 3.66
5675 10377 4.198530 TGACATCTGTTGACTGAAGCAAA 58.801 39.130 0.00 0.00 0.00 3.68
5685 10387 4.469586 TGGTTATAGCCTGACATCTGTTGA 59.530 41.667 7.19 0.00 0.00 3.18
5784 10488 9.650371 CAACATGGTAAGAACAATGATATTACG 57.350 33.333 0.00 0.00 39.12 3.18
5790 10494 5.243507 TGTGCAACATGGTAAGAACAATGAT 59.756 36.000 0.00 0.00 45.67 2.45
5807 10511 1.319614 ATGGCGGGGTATTGTGCAAC 61.320 55.000 0.00 0.00 37.35 4.17
5819 10524 1.202855 AGAATCATGAGGAATGGCGGG 60.203 52.381 0.09 0.00 36.86 6.13
5820 10525 2.149578 GAGAATCATGAGGAATGGCGG 58.850 52.381 0.09 0.00 36.86 6.13
5821 10526 3.123157 AGAGAATCATGAGGAATGGCG 57.877 47.619 0.09 0.00 37.82 5.69
5825 10530 8.630917 CAAAGCAAATAGAGAATCATGAGGAAT 58.369 33.333 0.09 0.00 37.82 3.01
5840 10545 4.923281 GCACCAAGTTACCAAAGCAAATAG 59.077 41.667 0.00 0.00 0.00 1.73
5919 10624 1.070786 GACAACCTTCCGGCACAGA 59.929 57.895 0.00 0.00 0.00 3.41
5920 10625 1.966451 GGACAACCTTCCGGCACAG 60.966 63.158 0.00 0.00 0.00 3.66
5999 10704 1.055040 GCAGATATGGGAGAGCCTGT 58.945 55.000 0.00 0.00 0.00 4.00
6037 10742 4.946157 CACATACAGGGAAGCTTCAGAAAT 59.054 41.667 27.02 11.00 0.00 2.17
6042 10747 1.350684 TGCACATACAGGGAAGCTTCA 59.649 47.619 27.02 7.35 0.00 3.02
6069 10774 0.240945 CAAATGCACCTTGGGACGAC 59.759 55.000 0.00 0.00 0.00 4.34
6130 10854 8.656849 CATAAACACTTAAATAACTGAGCGAGT 58.343 33.333 0.00 0.00 35.94 4.18
6184 10909 1.606668 TCAACAACAGGCACGGAAATC 59.393 47.619 0.00 0.00 0.00 2.17
6185 10910 1.608590 CTCAACAACAGGCACGGAAAT 59.391 47.619 0.00 0.00 0.00 2.17
6194 10919 3.817084 TGCAGATTCTTCTCAACAACAGG 59.183 43.478 0.00 0.00 0.00 4.00
6284 11009 5.222048 ACCACCAGTACCAGTAAATGTCAAT 60.222 40.000 0.00 0.00 0.00 2.57
6289 11014 4.215399 CACAACCACCAGTACCAGTAAATG 59.785 45.833 0.00 0.00 0.00 2.32
6364 11091 5.705441 TCAAACTGCCGAAACATAGAGAAAT 59.295 36.000 0.00 0.00 0.00 2.17
6374 11101 0.375803 ACACGTCAAACTGCCGAAAC 59.624 50.000 0.00 0.00 0.00 2.78
6412 11140 0.662085 TGACGCCACGGGTTAAAAAC 59.338 50.000 0.00 0.00 0.00 2.43
6438 11166 8.077991 CGGCACATTCAACTTAATTCATCATAT 58.922 33.333 0.00 0.00 0.00 1.78
6472 11200 4.246458 GCTCTATCAAAGGAGACACGTTT 58.754 43.478 0.00 0.00 37.11 3.60
6476 11204 4.569943 TGTTGCTCTATCAAAGGAGACAC 58.430 43.478 0.00 0.00 0.00 3.67
6498 11226 3.330701 ACTTGGGTGAACTGGATGTGTAT 59.669 43.478 0.00 0.00 0.00 2.29
6547 11278 5.772825 ATGAAGTAAAGCAAGTGCAAAGA 57.227 34.783 6.00 0.00 45.16 2.52
6564 11295 3.887621 TGAAACGGAGGGAGTATGAAG 57.112 47.619 0.00 0.00 0.00 3.02
6574 11305 7.941795 AACGACTTATATTATGAAACGGAGG 57.058 36.000 0.00 0.00 0.00 4.30
6614 11349 6.657836 AAATATACGTCGTTTTAGCAAGCT 57.342 33.333 1.78 0.00 0.00 3.74
6617 11352 7.361889 TCCAAAATATACGTCGTTTTAGCAA 57.638 32.000 1.78 0.00 0.00 3.91
6618 11353 6.964741 TCCAAAATATACGTCGTTTTAGCA 57.035 33.333 1.78 0.00 0.00 3.49
6619 11354 7.235777 TGTTCCAAAATATACGTCGTTTTAGC 58.764 34.615 1.78 0.00 0.00 3.09
6620 11355 8.649841 TCTGTTCCAAAATATACGTCGTTTTAG 58.350 33.333 1.78 0.00 0.00 1.85
6621 11356 8.531622 TCTGTTCCAAAATATACGTCGTTTTA 57.468 30.769 1.78 0.00 0.00 1.52
6622 11357 7.360607 CCTCTGTTCCAAAATATACGTCGTTTT 60.361 37.037 1.78 0.00 0.00 2.43
6623 11358 6.091713 CCTCTGTTCCAAAATATACGTCGTTT 59.908 38.462 1.78 0.00 0.00 3.60
6624 11359 5.579511 CCTCTGTTCCAAAATATACGTCGTT 59.420 40.000 1.78 0.00 0.00 3.85
6625 11360 5.105635 TCCTCTGTTCCAAAATATACGTCGT 60.106 40.000 2.21 2.21 0.00 4.34
6626 11361 5.345702 TCCTCTGTTCCAAAATATACGTCG 58.654 41.667 0.00 0.00 0.00 5.12
6627 11362 6.817140 ACTTCCTCTGTTCCAAAATATACGTC 59.183 38.462 0.00 0.00 0.00 4.34
6628 11363 6.708285 ACTTCCTCTGTTCCAAAATATACGT 58.292 36.000 0.00 0.00 0.00 3.57
6629 11364 8.888579 ATACTTCCTCTGTTCCAAAATATACG 57.111 34.615 0.00 0.00 0.00 3.06
6647 11382 7.336931 TCACCAGCTCAATCTTTTTATACTTCC 59.663 37.037 0.00 0.00 0.00 3.46
6659 11394 4.090761 TGTCTTTTCACCAGCTCAATCT 57.909 40.909 0.00 0.00 0.00 2.40
6688 11423 6.662755 AGTCCTACCAATCAAAATGCTATGA 58.337 36.000 0.00 0.00 0.00 2.15
6689 11424 6.293081 CGAGTCCTACCAATCAAAATGCTATG 60.293 42.308 0.00 0.00 0.00 2.23
6695 11430 6.316390 GTCATTCGAGTCCTACCAATCAAAAT 59.684 38.462 0.00 0.00 0.00 1.82
6711 11472 5.230182 TGATTGATATTCCCGTCATTCGAG 58.770 41.667 0.00 0.00 42.86 4.04
6716 11477 8.924511 AAGTATTTGATTGATATTCCCGTCAT 57.075 30.769 0.00 0.00 0.00 3.06
6758 12683 0.310543 TGCCAACGCTGTGTTTCATC 59.689 50.000 3.43 0.00 39.29 2.92
6797 12722 3.241678 GCTAGTGTTACGAATCGCACTTG 60.242 47.826 16.80 15.65 41.67 3.16
6798 12723 2.921754 GCTAGTGTTACGAATCGCACTT 59.078 45.455 16.80 4.70 41.67 3.16
6816 12741 3.181462 TGCTGCCTACTACGTACTAGCTA 60.181 47.826 0.00 0.00 0.00 3.32
6817 12742 2.220313 GCTGCCTACTACGTACTAGCT 58.780 52.381 0.00 0.00 0.00 3.32
6818 12743 1.945394 TGCTGCCTACTACGTACTAGC 59.055 52.381 0.00 0.00 0.00 3.42
6819 12744 3.545624 CGTTGCTGCCTACTACGTACTAG 60.546 52.174 0.00 0.00 32.78 2.57
6820 12745 2.352651 CGTTGCTGCCTACTACGTACTA 59.647 50.000 0.00 0.00 32.78 1.82
6821 12746 1.131883 CGTTGCTGCCTACTACGTACT 59.868 52.381 0.00 0.00 32.78 2.73
6822 12747 1.542544 CGTTGCTGCCTACTACGTAC 58.457 55.000 0.00 0.00 32.78 3.67
6823 12748 0.452987 CCGTTGCTGCCTACTACGTA 59.547 55.000 0.00 0.00 35.06 3.57
6824 12749 1.214589 CCGTTGCTGCCTACTACGT 59.785 57.895 0.00 0.00 35.06 3.57
6825 12750 0.102481 ATCCGTTGCTGCCTACTACG 59.898 55.000 0.00 0.00 36.30 3.51
6827 12752 1.480789 TGATCCGTTGCTGCCTACTA 58.519 50.000 0.00 0.00 0.00 1.82
6828 12753 0.833287 ATGATCCGTTGCTGCCTACT 59.167 50.000 0.00 0.00 0.00 2.57
6829 12754 1.668419 AATGATCCGTTGCTGCCTAC 58.332 50.000 0.00 0.00 0.00 3.18
6830 12755 2.434336 AGTAATGATCCGTTGCTGCCTA 59.566 45.455 0.00 0.00 0.00 3.93
6831 12756 1.210478 AGTAATGATCCGTTGCTGCCT 59.790 47.619 0.00 0.00 0.00 4.75
6832 12757 1.331756 CAGTAATGATCCGTTGCTGCC 59.668 52.381 11.22 0.00 36.60 4.85
6834 12759 5.176406 CAGATACAGTAATGATCCGTTGCTG 59.824 44.000 18.12 18.12 44.55 4.41
6835 12760 5.292765 CAGATACAGTAATGATCCGTTGCT 58.707 41.667 0.00 0.00 0.00 3.91
6836 12761 4.449068 CCAGATACAGTAATGATCCGTTGC 59.551 45.833 0.00 0.00 0.00 4.17
6842 12768 8.993121 CATTTACACCCAGATACAGTAATGATC 58.007 37.037 0.00 0.00 0.00 2.92
6845 12771 6.542005 TGCATTTACACCCAGATACAGTAATG 59.458 38.462 0.00 0.00 0.00 1.90
6858 12784 0.532115 CCAAGCCTGCATTTACACCC 59.468 55.000 0.00 0.00 0.00 4.61
6876 12802 4.517285 TGAGGCAGAAACTATCAACATCC 58.483 43.478 0.00 0.00 0.00 3.51
6880 12806 6.551385 CCATATGAGGCAGAAACTATCAAC 57.449 41.667 3.65 0.00 0.00 3.18
6939 12865 3.613689 GCCTACCCGATCCCGACC 61.614 72.222 0.00 0.00 38.22 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.