Multiple sequence alignment - TraesCS2A01G445300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G445300 chr2A 100.000 2353 0 0 1 2353 694977609 694975257 0.000000e+00 4346
1 TraesCS2A01G445300 chr2A 92.459 663 42 1 8 662 734734388 734735050 0.000000e+00 941
2 TraesCS2A01G445300 chr2A 91.390 662 57 0 1 662 165347570 165348231 0.000000e+00 907
3 TraesCS2A01G445300 chr2A 79.980 1019 85 50 670 1624 694955917 694954954 1.970000e-180 641
4 TraesCS2A01G445300 chr2A 83.776 339 48 6 1628 1959 726770895 726770557 4.880000e-82 315
5 TraesCS2A01G445300 chr2A 86.667 210 22 6 2147 2352 695145484 695145277 6.540000e-56 228
6 TraesCS2A01G445300 chr7D 93.582 670 35 1 1 662 568007492 568008161 0.000000e+00 992
7 TraesCS2A01G445300 chr7D 92.388 670 43 1 1 662 474499937 474500606 0.000000e+00 948
8 TraesCS2A01G445300 chr7D 84.211 323 45 6 1628 1945 22673336 22673657 2.270000e-80 309
9 TraesCS2A01G445300 chr7A 93.051 662 44 1 1 662 167800039 167800698 0.000000e+00 966
10 TraesCS2A01G445300 chr1A 90.347 663 62 2 1 662 578770227 578770888 0.000000e+00 869
11 TraesCS2A01G445300 chr2B 90.090 666 60 5 1 665 643125132 643124472 0.000000e+00 859
12 TraesCS2A01G445300 chr2B 89.894 663 62 4 1 662 766109441 766108783 0.000000e+00 848
13 TraesCS2A01G445300 chr2B 82.230 861 79 40 709 1528 661778927 661778100 0.000000e+00 675
14 TraesCS2A01G445300 chr2B 82.839 775 70 26 660 1384 661833741 661832980 9.170000e-179 636
15 TraesCS2A01G445300 chr2B 85.577 312 38 7 1629 1939 485752196 485752501 1.050000e-83 320
16 TraesCS2A01G445300 chr2B 84.768 151 18 5 2147 2295 662354824 662354677 1.880000e-31 147
17 TraesCS2A01G445300 chr1B 90.090 666 57 9 3 665 21281008 21280349 0.000000e+00 856
18 TraesCS2A01G445300 chr2D 82.877 1022 85 46 668 1624 555224087 555223091 0.000000e+00 835
19 TraesCS2A01G445300 chr2D 86.436 376 44 6 1533 1904 555234347 555233975 2.820000e-109 405
20 TraesCS2A01G445300 chr2D 84.713 314 40 7 1628 1939 412253707 412253400 8.170000e-80 307
21 TraesCS2A01G445300 chr2D 85.849 212 22 8 2147 2352 555383681 555383472 3.940000e-53 219
22 TraesCS2A01G445300 chr2D 91.367 139 7 3 762 900 555237663 555237530 3.990000e-43 185
23 TraesCS2A01G445300 chr2D 85.714 112 12 3 2176 2286 555387819 555387711 5.310000e-22 115
24 TraesCS2A01G445300 chr4A 86.061 330 43 3 1628 1955 636665465 636665137 3.720000e-93 351
25 TraesCS2A01G445300 chr5D 83.881 335 49 5 1628 1958 46726560 46726893 4.880000e-82 315
26 TraesCS2A01G445300 chr3D 83.776 339 48 6 1628 1959 525639117 525638779 4.880000e-82 315
27 TraesCS2A01G445300 chr6D 83.841 328 47 5 1628 1954 65757101 65757423 8.170000e-80 307


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G445300 chr2A 694975257 694977609 2352 True 4346 4346 100.0000 1 2353 1 chr2A.!!$R2 2352
1 TraesCS2A01G445300 chr2A 734734388 734735050 662 False 941 941 92.4590 8 662 1 chr2A.!!$F2 654
2 TraesCS2A01G445300 chr2A 165347570 165348231 661 False 907 907 91.3900 1 662 1 chr2A.!!$F1 661
3 TraesCS2A01G445300 chr2A 694954954 694955917 963 True 641 641 79.9800 670 1624 1 chr2A.!!$R1 954
4 TraesCS2A01G445300 chr7D 568007492 568008161 669 False 992 992 93.5820 1 662 1 chr7D.!!$F3 661
5 TraesCS2A01G445300 chr7D 474499937 474500606 669 False 948 948 92.3880 1 662 1 chr7D.!!$F2 661
6 TraesCS2A01G445300 chr7A 167800039 167800698 659 False 966 966 93.0510 1 662 1 chr7A.!!$F1 661
7 TraesCS2A01G445300 chr1A 578770227 578770888 661 False 869 869 90.3470 1 662 1 chr1A.!!$F1 661
8 TraesCS2A01G445300 chr2B 643124472 643125132 660 True 859 859 90.0900 1 665 1 chr2B.!!$R1 664
9 TraesCS2A01G445300 chr2B 766108783 766109441 658 True 848 848 89.8940 1 662 1 chr2B.!!$R5 661
10 TraesCS2A01G445300 chr2B 661778100 661778927 827 True 675 675 82.2300 709 1528 1 chr2B.!!$R2 819
11 TraesCS2A01G445300 chr2B 661832980 661833741 761 True 636 636 82.8390 660 1384 1 chr2B.!!$R3 724
12 TraesCS2A01G445300 chr1B 21280349 21281008 659 True 856 856 90.0900 3 665 1 chr1B.!!$R1 662
13 TraesCS2A01G445300 chr2D 555223091 555224087 996 True 835 835 82.8770 668 1624 1 chr2D.!!$R2 956
14 TraesCS2A01G445300 chr2D 555233975 555237663 3688 True 295 405 88.9015 762 1904 2 chr2D.!!$R5 1142

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
919 977 0.179092 GCGGCCATAAGAACTACGGT 60.179 55.0 2.24 0.0 0.0 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1958 4605 0.038166 GCTTCCAGTTCCACCCATCA 59.962 55.0 0.0 0.0 0.0 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 119 4.769688 TCCGATCTTGCATGTATGAACTT 58.230 39.130 3.56 0.00 0.00 2.66
177 186 2.295224 ACCTCTATTCCCCATTCCCCTT 60.295 50.000 0.00 0.00 0.00 3.95
225 234 2.293677 TCGAATCTAGCGTGCATGTT 57.706 45.000 7.93 3.80 0.00 2.71
368 377 1.633774 GTGAGAGTTGGGAGAGTGGA 58.366 55.000 0.00 0.00 0.00 4.02
454 464 3.382832 CGGCTTCTCGAGGGTGGT 61.383 66.667 13.56 0.00 0.00 4.16
457 467 2.637383 GCTTCTCGAGGGTGGTCGT 61.637 63.158 13.56 0.00 40.93 4.34
524 534 4.482386 CCTGAAGAAACTGTCGATTCGTA 58.518 43.478 5.89 0.00 0.00 3.43
533 543 1.262882 GTCGATTCGTACGTTCCCAC 58.737 55.000 16.05 8.18 0.00 4.61
545 555 4.980592 TCCCACTGAGGCAGGCCA 62.981 66.667 13.63 0.00 38.92 5.36
583 593 1.472082 CGTGCAATGCAGACCCAATAA 59.528 47.619 8.73 0.00 40.08 1.40
665 675 1.280444 CAACCAAACACGCCCGTAC 59.720 57.895 0.00 0.00 0.00 3.67
666 676 1.893335 AACCAAACACGCCCGTACC 60.893 57.895 0.00 0.00 0.00 3.34
677 687 4.393155 CCGTACCTGCTGCAGCCA 62.393 66.667 34.64 21.30 41.18 4.75
685 695 2.431942 GCTGCAGCCAACATGTGC 60.432 61.111 28.76 0.00 37.73 4.57
686 696 3.044280 CTGCAGCCAACATGTGCA 58.956 55.556 0.00 9.01 44.80 4.57
741 757 2.294512 GGTTTGGACCTTTGCTTCAGAG 59.705 50.000 0.00 0.00 42.99 3.35
750 766 5.082425 ACCTTTGCTTCAGAGAATGGAAAT 58.918 37.500 0.00 0.00 0.00 2.17
760 776 1.081004 AGAATGGAAATGGCCCCCTTT 59.919 47.619 0.00 0.00 0.00 3.11
869 903 3.102276 CGTGAGATTCAGAGAAGCGTAC 58.898 50.000 0.00 0.00 0.00 3.67
870 904 3.440228 GTGAGATTCAGAGAAGCGTACC 58.560 50.000 0.00 0.00 0.00 3.34
871 905 2.427453 TGAGATTCAGAGAAGCGTACCC 59.573 50.000 0.00 0.00 0.00 3.69
876 910 3.040147 TCAGAGAAGCGTACCCAAAAG 57.960 47.619 0.00 0.00 0.00 2.27
883 933 1.607148 AGCGTACCCAAAAGAAAGTGC 59.393 47.619 0.00 0.00 0.00 4.40
890 948 2.426738 CCCAAAAGAAAGTGCACTGTGA 59.573 45.455 22.49 0.00 0.00 3.58
913 971 1.002792 GAATTCGGCGGCCATAAGAAC 60.003 52.381 20.71 4.86 0.00 3.01
919 977 0.179092 GCGGCCATAAGAACTACGGT 60.179 55.000 2.24 0.00 0.00 4.83
921 979 1.805120 CGGCCATAAGAACTACGGTGG 60.805 57.143 2.24 0.00 0.00 4.61
974 1368 1.035139 TCCGAGCGTATACCTTTCCC 58.965 55.000 0.00 0.00 0.00 3.97
980 1525 0.595825 CGTATACCTTTCCCGCCGTC 60.596 60.000 0.00 0.00 0.00 4.79
986 1531 2.998480 TTTCCCGCCGTCTAGCCA 60.998 61.111 0.00 0.00 0.00 4.75
987 1532 2.515996 CTTTCCCGCCGTCTAGCCAA 62.516 60.000 0.00 0.00 0.00 4.52
1054 1657 2.674033 TCGCGGACGAGGAGGAAA 60.674 61.111 6.13 0.00 45.12 3.13
1272 2362 0.459759 TGCTGATTCTGAGCTCTGCG 60.460 55.000 16.19 3.61 38.67 5.18
1314 2838 4.476628 TCTGCAGATATGTCAAGCTTCA 57.523 40.909 13.74 0.00 0.00 3.02
1384 3706 0.171455 AAGGAGACGATCGTGACAGC 59.829 55.000 28.12 10.87 0.00 4.40
1385 3707 1.226717 GGAGACGATCGTGACAGCC 60.227 63.158 28.12 14.71 0.00 4.85
1391 3713 0.799917 CGATCGTGACAGCCTGACAG 60.800 60.000 7.03 0.00 0.00 3.51
1426 3757 2.290641 GAGGACGCGATATGCCAAAAAT 59.709 45.455 15.93 0.00 42.08 1.82
1434 3765 5.685068 CGCGATATGCCAAAAATATGTGAAA 59.315 36.000 0.00 0.00 42.08 2.69
1511 4131 2.375110 CGCTGCACCAATAATAAAGCG 58.625 47.619 0.00 0.00 44.83 4.68
1512 4132 2.223249 CGCTGCACCAATAATAAAGCGT 60.223 45.455 6.03 0.00 45.04 5.07
1530 4150 3.649870 CGTGCATACAGAACGCAATAA 57.350 42.857 0.00 0.00 43.49 1.40
1535 4178 5.227805 GTGCATACAGAACGCAATAATTGTG 59.772 40.000 0.00 0.00 46.24 3.33
1594 4239 1.202758 TGCGGTGAACAAACCTCTCAT 60.203 47.619 0.00 0.00 38.14 2.90
1640 4285 9.545611 GTATAAAATGACGTAATTCAAAACGGT 57.454 29.630 0.00 0.00 43.25 4.83
1642 4287 5.427036 AATGACGTAATTCAAAACGGTGT 57.573 34.783 0.00 0.00 43.25 4.16
1644 4289 3.248125 TGACGTAATTCAAAACGGTGTCC 59.752 43.478 3.74 0.00 43.25 4.02
1647 4292 3.495377 CGTAATTCAAAACGGTGTCCAGA 59.505 43.478 0.00 0.00 35.51 3.86
1657 4302 1.405821 CGGTGTCCAGACTCATCTACC 59.594 57.143 0.00 0.00 32.25 3.18
1662 4307 1.930204 TCCAGACTCATCTACCCCTGA 59.070 52.381 0.00 0.00 32.25 3.86
1669 4314 4.104086 ACTCATCTACCCCTGATGAACAA 58.896 43.478 7.65 0.00 46.30 2.83
1672 4317 6.386927 ACTCATCTACCCCTGATGAACAATAA 59.613 38.462 7.65 0.00 46.30 1.40
1675 4320 8.281531 TCATCTACCCCTGATGAACAATAAATT 58.718 33.333 4.22 0.00 44.79 1.82
1676 4321 9.573166 CATCTACCCCTGATGAACAATAAATTA 57.427 33.333 0.00 0.00 42.68 1.40
1750 4397 2.197577 GAGAATCTTCTAGGTGCGTGC 58.802 52.381 0.00 0.00 37.73 5.34
1769 4416 5.020758 CGTGCAAAATTTCAAAGTGTTTGG 58.979 37.500 0.00 0.00 40.98 3.28
1779 4426 6.522625 TTCAAAGTGTTTGGACATTTGAGA 57.477 33.333 0.00 3.53 40.33 3.27
1783 4430 3.319122 AGTGTTTGGACATTTGAGAAGCC 59.681 43.478 0.00 0.00 38.23 4.35
1784 4431 2.627699 TGTTTGGACATTTGAGAAGCCC 59.372 45.455 0.00 0.00 0.00 5.19
1789 4436 0.110486 ACATTTGAGAAGCCCGTGGT 59.890 50.000 0.00 0.00 0.00 4.16
1818 4465 1.557099 AATCCGGTCTACAGAGTGCA 58.443 50.000 0.00 0.00 0.00 4.57
1841 4488 7.225538 TGCACTTTTTGAAAGTTTCTTTGACAA 59.774 29.630 16.33 0.00 0.00 3.18
1842 4489 8.067189 GCACTTTTTGAAAGTTTCTTTGACAAA 58.933 29.630 16.33 5.63 0.00 2.83
1870 4517 8.424731 CAAATTTGTTATTTTTACCACGAGCTC 58.575 33.333 10.15 2.73 0.00 4.09
1871 4518 6.621316 TTTGTTATTTTTACCACGAGCTCA 57.379 33.333 15.40 0.00 0.00 4.26
1877 4524 5.759506 TTTTTACCACGAGCTCATCAAAA 57.240 34.783 15.40 9.14 0.00 2.44
1881 4528 2.749621 ACCACGAGCTCATCAAAATTCC 59.250 45.455 15.40 0.00 0.00 3.01
1887 4534 5.221224 ACGAGCTCATCAAAATTCCAAACAA 60.221 36.000 15.40 0.00 0.00 2.83
1904 4551 2.200899 ACAACTTGAAATTTGGCACGC 58.799 42.857 0.00 0.00 0.00 5.34
1905 4552 2.200067 CAACTTGAAATTTGGCACGCA 58.800 42.857 0.00 0.00 0.00 5.24
1906 4553 1.851658 ACTTGAAATTTGGCACGCAC 58.148 45.000 0.00 0.00 0.00 5.34
1907 4554 1.139163 CTTGAAATTTGGCACGCACC 58.861 50.000 0.00 0.00 0.00 5.01
1908 4555 0.749649 TTGAAATTTGGCACGCACCT 59.250 45.000 0.00 0.00 0.00 4.00
1909 4556 1.610363 TGAAATTTGGCACGCACCTA 58.390 45.000 0.00 0.00 0.00 3.08
1910 4557 1.539388 TGAAATTTGGCACGCACCTAG 59.461 47.619 0.00 0.00 0.00 3.02
1911 4558 1.810151 GAAATTTGGCACGCACCTAGA 59.190 47.619 0.00 0.00 0.00 2.43
1912 4559 1.904287 AATTTGGCACGCACCTAGAA 58.096 45.000 0.00 0.00 0.00 2.10
1913 4560 1.453155 ATTTGGCACGCACCTAGAAG 58.547 50.000 0.00 0.00 0.00 2.85
1914 4561 0.394938 TTTGGCACGCACCTAGAAGA 59.605 50.000 0.00 0.00 0.00 2.87
1915 4562 0.613260 TTGGCACGCACCTAGAAGAT 59.387 50.000 0.00 0.00 0.00 2.40
1916 4563 0.613260 TGGCACGCACCTAGAAGATT 59.387 50.000 0.00 0.00 0.00 2.40
1917 4564 1.291132 GGCACGCACCTAGAAGATTC 58.709 55.000 0.00 0.00 0.00 2.52
1918 4565 1.134670 GGCACGCACCTAGAAGATTCT 60.135 52.381 0.07 0.07 41.24 2.40
1919 4566 2.197577 GCACGCACCTAGAAGATTCTC 58.802 52.381 0.00 0.00 38.70 2.87
1920 4567 2.159170 GCACGCACCTAGAAGATTCTCT 60.159 50.000 0.00 0.00 38.70 3.10
1921 4568 3.701241 CACGCACCTAGAAGATTCTCTC 58.299 50.000 0.00 0.00 38.70 3.20
1922 4569 3.129462 CACGCACCTAGAAGATTCTCTCA 59.871 47.826 0.00 0.00 38.70 3.27
1923 4570 3.764434 ACGCACCTAGAAGATTCTCTCAA 59.236 43.478 0.00 0.00 38.70 3.02
1924 4571 4.109050 CGCACCTAGAAGATTCTCTCAAC 58.891 47.826 0.00 0.00 38.70 3.18
1925 4572 4.142271 CGCACCTAGAAGATTCTCTCAACT 60.142 45.833 0.00 0.00 38.70 3.16
1926 4573 5.623368 CGCACCTAGAAGATTCTCTCAACTT 60.623 44.000 0.00 0.00 38.70 2.66
1927 4574 6.169800 GCACCTAGAAGATTCTCTCAACTTT 58.830 40.000 0.00 0.00 38.70 2.66
1928 4575 6.312672 GCACCTAGAAGATTCTCTCAACTTTC 59.687 42.308 0.00 0.00 38.70 2.62
1929 4576 7.382110 CACCTAGAAGATTCTCTCAACTTTCA 58.618 38.462 0.00 0.00 38.70 2.69
1930 4577 8.040132 CACCTAGAAGATTCTCTCAACTTTCAT 58.960 37.037 0.00 0.00 38.70 2.57
1931 4578 8.040132 ACCTAGAAGATTCTCTCAACTTTCATG 58.960 37.037 0.00 0.00 38.70 3.07
1932 4579 8.040132 CCTAGAAGATTCTCTCAACTTTCATGT 58.960 37.037 0.00 0.00 38.70 3.21
1933 4580 7.670009 AGAAGATTCTCTCAACTTTCATGTG 57.330 36.000 0.00 0.00 29.94 3.21
1934 4581 7.222872 AGAAGATTCTCTCAACTTTCATGTGT 58.777 34.615 0.00 0.00 29.94 3.72
1935 4582 8.370940 AGAAGATTCTCTCAACTTTCATGTGTA 58.629 33.333 0.00 0.00 29.94 2.90
1936 4583 8.908786 AAGATTCTCTCAACTTTCATGTGTAA 57.091 30.769 0.00 0.00 0.00 2.41
1937 4584 8.908786 AGATTCTCTCAACTTTCATGTGTAAA 57.091 30.769 0.00 0.00 0.00 2.01
1938 4585 9.342308 AGATTCTCTCAACTTTCATGTGTAAAA 57.658 29.630 0.00 0.00 0.00 1.52
1967 4614 8.388484 TCAAATTGTTTTAAATTGATGGGTGG 57.612 30.769 0.00 0.00 30.21 4.61
1968 4615 8.213679 TCAAATTGTTTTAAATTGATGGGTGGA 58.786 29.630 0.00 0.00 30.21 4.02
1969 4616 8.844244 CAAATTGTTTTAAATTGATGGGTGGAA 58.156 29.630 0.00 0.00 30.21 3.53
1970 4617 7.977789 ATTGTTTTAAATTGATGGGTGGAAC 57.022 32.000 0.00 0.00 0.00 3.62
1971 4618 6.739331 TGTTTTAAATTGATGGGTGGAACT 57.261 33.333 0.00 0.00 36.74 3.01
1972 4619 6.520272 TGTTTTAAATTGATGGGTGGAACTG 58.480 36.000 0.00 0.00 36.74 3.16
1973 4620 5.736951 TTTAAATTGATGGGTGGAACTGG 57.263 39.130 0.00 0.00 36.74 4.00
1974 4621 3.541242 AAATTGATGGGTGGAACTGGA 57.459 42.857 0.00 0.00 36.74 3.86
1975 4622 3.541242 AATTGATGGGTGGAACTGGAA 57.459 42.857 0.00 0.00 36.74 3.53
1976 4623 2.584835 TTGATGGGTGGAACTGGAAG 57.415 50.000 0.00 0.00 42.29 3.46
1977 4624 0.038166 TGATGGGTGGAACTGGAAGC 59.962 55.000 0.00 0.00 37.60 3.86
1978 4625 0.038166 GATGGGTGGAACTGGAAGCA 59.962 55.000 0.00 0.00 37.60 3.91
1979 4626 0.706433 ATGGGTGGAACTGGAAGCAT 59.294 50.000 0.00 0.00 37.60 3.79
1980 4627 0.251297 TGGGTGGAACTGGAAGCATG 60.251 55.000 0.00 0.00 37.60 4.06
1981 4628 0.038166 GGGTGGAACTGGAAGCATGA 59.962 55.000 0.00 0.00 37.60 3.07
1982 4629 1.547675 GGGTGGAACTGGAAGCATGAA 60.548 52.381 0.00 0.00 37.60 2.57
1983 4630 1.541588 GGTGGAACTGGAAGCATGAAC 59.458 52.381 0.00 0.00 37.60 3.18
1984 4631 2.508526 GTGGAACTGGAAGCATGAACT 58.491 47.619 0.00 0.00 37.60 3.01
1985 4632 2.227388 GTGGAACTGGAAGCATGAACTG 59.773 50.000 0.00 0.00 37.60 3.16
1986 4633 2.158623 TGGAACTGGAAGCATGAACTGT 60.159 45.455 0.00 0.00 37.60 3.55
1987 4634 2.887152 GGAACTGGAAGCATGAACTGTT 59.113 45.455 0.00 0.00 37.60 3.16
1988 4635 3.319122 GGAACTGGAAGCATGAACTGTTT 59.681 43.478 0.00 0.00 37.60 2.83
1989 4636 4.202151 GGAACTGGAAGCATGAACTGTTTT 60.202 41.667 0.00 0.00 37.60 2.43
1990 4637 5.343307 AACTGGAAGCATGAACTGTTTTT 57.657 34.783 0.00 0.00 37.60 1.94
2010 4657 6.983474 TTTTTCTTTTCTTTTTGAGGCAGG 57.017 33.333 0.00 0.00 0.00 4.85
2011 4658 4.670896 TTCTTTTCTTTTTGAGGCAGGG 57.329 40.909 0.00 0.00 0.00 4.45
2012 4659 3.909732 TCTTTTCTTTTTGAGGCAGGGA 58.090 40.909 0.00 0.00 0.00 4.20
2013 4660 4.285863 TCTTTTCTTTTTGAGGCAGGGAA 58.714 39.130 0.00 0.00 0.00 3.97
2014 4661 4.342092 TCTTTTCTTTTTGAGGCAGGGAAG 59.658 41.667 0.00 0.00 0.00 3.46
2015 4662 3.312736 TTCTTTTTGAGGCAGGGAAGT 57.687 42.857 0.00 0.00 0.00 3.01
2016 4663 2.586425 TCTTTTTGAGGCAGGGAAGTG 58.414 47.619 0.00 0.00 0.00 3.16
2017 4664 2.091885 TCTTTTTGAGGCAGGGAAGTGT 60.092 45.455 0.00 0.00 0.00 3.55
2018 4665 1.691196 TTTTGAGGCAGGGAAGTGTG 58.309 50.000 0.00 0.00 0.00 3.82
2019 4666 0.843309 TTTGAGGCAGGGAAGTGTGA 59.157 50.000 0.00 0.00 0.00 3.58
2020 4667 0.843309 TTGAGGCAGGGAAGTGTGAA 59.157 50.000 0.00 0.00 0.00 3.18
2021 4668 0.108585 TGAGGCAGGGAAGTGTGAAC 59.891 55.000 0.00 0.00 0.00 3.18
2022 4669 0.398318 GAGGCAGGGAAGTGTGAACT 59.602 55.000 0.00 0.00 0.00 3.01
2023 4670 0.846693 AGGCAGGGAAGTGTGAACTT 59.153 50.000 0.00 0.00 0.00 2.66
2024 4671 0.954452 GGCAGGGAAGTGTGAACTTG 59.046 55.000 0.00 0.00 0.00 3.16
2025 4672 1.680338 GCAGGGAAGTGTGAACTTGT 58.320 50.000 0.00 0.00 0.00 3.16
2026 4673 1.334869 GCAGGGAAGTGTGAACTTGTG 59.665 52.381 0.00 0.00 0.00 3.33
2027 4674 2.917933 CAGGGAAGTGTGAACTTGTGA 58.082 47.619 0.00 0.00 0.00 3.58
2028 4675 3.278574 CAGGGAAGTGTGAACTTGTGAA 58.721 45.455 0.00 0.00 0.00 3.18
2029 4676 3.313526 CAGGGAAGTGTGAACTTGTGAAG 59.686 47.826 0.00 0.00 0.00 3.02
2030 4677 3.199946 AGGGAAGTGTGAACTTGTGAAGA 59.800 43.478 0.00 0.00 0.00 2.87
2031 4678 3.561725 GGGAAGTGTGAACTTGTGAAGAG 59.438 47.826 0.00 0.00 0.00 2.85
2032 4679 3.561725 GGAAGTGTGAACTTGTGAAGAGG 59.438 47.826 0.00 0.00 0.00 3.69
2033 4680 2.565841 AGTGTGAACTTGTGAAGAGGC 58.434 47.619 0.00 0.00 0.00 4.70
2034 4681 2.092968 AGTGTGAACTTGTGAAGAGGCA 60.093 45.455 0.00 0.00 0.00 4.75
2035 4682 2.880890 GTGTGAACTTGTGAAGAGGCAT 59.119 45.455 0.00 0.00 0.00 4.40
2036 4683 2.880268 TGTGAACTTGTGAAGAGGCATG 59.120 45.455 0.00 0.00 0.00 4.06
2037 4684 2.880890 GTGAACTTGTGAAGAGGCATGT 59.119 45.455 0.00 0.00 0.00 3.21
2038 4685 3.316308 GTGAACTTGTGAAGAGGCATGTT 59.684 43.478 0.00 0.00 36.25 2.71
2039 4686 3.953612 TGAACTTGTGAAGAGGCATGTTT 59.046 39.130 0.00 0.00 34.55 2.83
2040 4687 4.402155 TGAACTTGTGAAGAGGCATGTTTT 59.598 37.500 0.00 0.00 34.55 2.43
2041 4688 4.311816 ACTTGTGAAGAGGCATGTTTTG 57.688 40.909 0.00 0.00 0.00 2.44
2042 4689 3.068590 ACTTGTGAAGAGGCATGTTTTGG 59.931 43.478 0.00 0.00 0.00 3.28
2043 4690 2.665165 TGTGAAGAGGCATGTTTTGGT 58.335 42.857 0.00 0.00 0.00 3.67
2044 4691 3.030291 TGTGAAGAGGCATGTTTTGGTT 58.970 40.909 0.00 0.00 0.00 3.67
2045 4692 3.450457 TGTGAAGAGGCATGTTTTGGTTT 59.550 39.130 0.00 0.00 0.00 3.27
2046 4693 4.051237 GTGAAGAGGCATGTTTTGGTTTC 58.949 43.478 0.00 0.00 0.00 2.78
2047 4694 3.243367 TGAAGAGGCATGTTTTGGTTTCG 60.243 43.478 0.00 0.00 0.00 3.46
2048 4695 2.306847 AGAGGCATGTTTTGGTTTCGT 58.693 42.857 0.00 0.00 0.00 3.85
2049 4696 2.693074 AGAGGCATGTTTTGGTTTCGTT 59.307 40.909 0.00 0.00 0.00 3.85
2050 4697 2.794350 GAGGCATGTTTTGGTTTCGTTG 59.206 45.455 0.00 0.00 0.00 4.10
2051 4698 1.864082 GGCATGTTTTGGTTTCGTTGG 59.136 47.619 0.00 0.00 0.00 3.77
2052 4699 1.260297 GCATGTTTTGGTTTCGTTGGC 59.740 47.619 0.00 0.00 0.00 4.52
2053 4700 1.864082 CATGTTTTGGTTTCGTTGGCC 59.136 47.619 0.00 0.00 0.00 5.36
2054 4701 0.895530 TGTTTTGGTTTCGTTGGCCA 59.104 45.000 0.00 0.00 0.00 5.36
2055 4702 1.482593 TGTTTTGGTTTCGTTGGCCAT 59.517 42.857 6.09 0.00 31.71 4.40
2056 4703 2.693591 TGTTTTGGTTTCGTTGGCCATA 59.306 40.909 6.09 0.00 31.71 2.74
2057 4704 3.132289 TGTTTTGGTTTCGTTGGCCATAA 59.868 39.130 6.09 0.00 31.71 1.90
2058 4705 4.202264 TGTTTTGGTTTCGTTGGCCATAAT 60.202 37.500 6.09 0.00 31.71 1.28
2059 4706 3.584406 TTGGTTTCGTTGGCCATAATG 57.416 42.857 6.09 0.00 31.71 1.90
2060 4707 1.203523 TGGTTTCGTTGGCCATAATGC 59.796 47.619 6.09 0.00 0.00 3.56
2061 4708 1.203523 GGTTTCGTTGGCCATAATGCA 59.796 47.619 6.09 0.00 0.00 3.96
2062 4709 2.159114 GGTTTCGTTGGCCATAATGCAT 60.159 45.455 6.09 0.00 0.00 3.96
2063 4710 2.859538 GTTTCGTTGGCCATAATGCATG 59.140 45.455 6.09 0.00 0.00 4.06
2064 4711 0.385029 TCGTTGGCCATAATGCATGC 59.615 50.000 11.82 11.82 32.84 4.06
2065 4712 0.935831 CGTTGGCCATAATGCATGCG 60.936 55.000 6.09 0.00 32.84 4.73
2066 4713 0.385029 GTTGGCCATAATGCATGCGA 59.615 50.000 6.09 2.48 32.84 5.10
2067 4714 0.669619 TTGGCCATAATGCATGCGAG 59.330 50.000 6.09 0.40 32.84 5.03
2068 4715 1.174078 TGGCCATAATGCATGCGAGG 61.174 55.000 14.09 10.89 32.84 4.63
2069 4716 1.080974 GCCATAATGCATGCGAGGC 60.081 57.895 14.09 16.71 32.84 4.70
2070 4717 1.521450 GCCATAATGCATGCGAGGCT 61.521 55.000 23.00 6.70 37.67 4.58
2071 4718 0.956633 CCATAATGCATGCGAGGCTT 59.043 50.000 14.09 4.05 32.84 4.35
2072 4719 1.068748 CCATAATGCATGCGAGGCTTC 60.069 52.381 14.09 0.00 32.84 3.86
2073 4720 1.878088 CATAATGCATGCGAGGCTTCT 59.122 47.619 14.09 0.00 0.00 2.85
2074 4721 2.908688 TAATGCATGCGAGGCTTCTA 57.091 45.000 14.09 0.00 0.00 2.10
2075 4722 2.042686 AATGCATGCGAGGCTTCTAA 57.957 45.000 14.09 0.00 0.00 2.10
2076 4723 1.590932 ATGCATGCGAGGCTTCTAAG 58.409 50.000 14.09 0.00 0.00 2.18
2077 4724 0.536724 TGCATGCGAGGCTTCTAAGA 59.463 50.000 14.09 0.00 0.00 2.10
2078 4725 1.139654 TGCATGCGAGGCTTCTAAGAT 59.860 47.619 14.09 0.00 0.00 2.40
2079 4726 1.530293 GCATGCGAGGCTTCTAAGATG 59.470 52.381 0.00 0.00 0.00 2.90
2080 4727 2.141517 CATGCGAGGCTTCTAAGATGG 58.858 52.381 0.00 0.00 0.00 3.51
2081 4728 0.465705 TGCGAGGCTTCTAAGATGGG 59.534 55.000 0.00 0.00 0.00 4.00
2082 4729 0.882484 GCGAGGCTTCTAAGATGGGC 60.882 60.000 0.00 0.00 0.00 5.36
2083 4730 0.755686 CGAGGCTTCTAAGATGGGCT 59.244 55.000 0.00 0.00 37.30 5.19
2084 4731 1.270041 CGAGGCTTCTAAGATGGGCTC 60.270 57.143 11.59 11.59 44.39 4.70
2085 4732 0.755686 AGGCTTCTAAGATGGGCTCG 59.244 55.000 0.00 0.00 0.00 5.03
2086 4733 0.250081 GGCTTCTAAGATGGGCTCGG 60.250 60.000 0.00 0.00 0.00 4.63
2087 4734 0.250081 GCTTCTAAGATGGGCTCGGG 60.250 60.000 0.00 0.00 0.00 5.14
2088 4735 1.123928 CTTCTAAGATGGGCTCGGGT 58.876 55.000 0.00 0.00 0.00 5.28
2089 4736 2.317040 CTTCTAAGATGGGCTCGGGTA 58.683 52.381 0.00 0.00 0.00 3.69
2090 4737 2.696526 TCTAAGATGGGCTCGGGTAT 57.303 50.000 0.00 0.00 0.00 2.73
2091 4738 2.972348 TCTAAGATGGGCTCGGGTATT 58.028 47.619 0.00 0.00 0.00 1.89
2092 4739 4.122337 TCTAAGATGGGCTCGGGTATTA 57.878 45.455 0.00 0.00 0.00 0.98
2093 4740 3.830755 TCTAAGATGGGCTCGGGTATTAC 59.169 47.826 0.00 0.00 0.00 1.89
2094 4741 1.349067 AGATGGGCTCGGGTATTACC 58.651 55.000 4.11 4.11 37.60 2.85
2103 4750 1.007387 GGGTATTACCGTACGGGCG 60.007 63.158 35.86 13.67 39.83 6.13
2104 4751 1.452145 GGGTATTACCGTACGGGCGA 61.452 60.000 35.86 21.83 39.83 5.54
2105 4752 0.383949 GGTATTACCGTACGGGCGAA 59.616 55.000 35.86 25.82 40.62 4.70
2106 4753 1.000274 GGTATTACCGTACGGGCGAAT 60.000 52.381 35.86 29.53 40.62 3.34
2107 4754 2.319472 GTATTACCGTACGGGCGAATC 58.681 52.381 35.86 19.80 40.62 2.52
2108 4755 0.318107 ATTACCGTACGGGCGAATCG 60.318 55.000 35.86 10.65 40.62 3.34
2109 4756 1.372838 TTACCGTACGGGCGAATCGA 61.373 55.000 35.86 11.01 40.62 3.59
2110 4757 2.047151 TACCGTACGGGCGAATCGAC 62.047 60.000 35.86 2.09 40.62 4.20
2117 4764 4.278956 GGCGAATCGACCACTTGT 57.721 55.556 6.91 0.00 0.00 3.16
2118 4765 3.429043 GGCGAATCGACCACTTGTA 57.571 52.632 6.91 0.00 0.00 2.41
2119 4766 1.717194 GGCGAATCGACCACTTGTAA 58.283 50.000 6.91 0.00 0.00 2.41
2120 4767 1.659098 GGCGAATCGACCACTTGTAAG 59.341 52.381 6.91 0.00 0.00 2.34
2121 4768 2.602878 GCGAATCGACCACTTGTAAGA 58.397 47.619 6.91 0.00 0.00 2.10
2122 4769 2.344741 GCGAATCGACCACTTGTAAGAC 59.655 50.000 6.91 0.00 0.00 3.01
2123 4770 2.921754 CGAATCGACCACTTGTAAGACC 59.078 50.000 0.00 0.00 0.00 3.85
2124 4771 3.613193 CGAATCGACCACTTGTAAGACCA 60.613 47.826 0.00 0.00 0.00 4.02
2125 4772 4.504858 GAATCGACCACTTGTAAGACCAT 58.495 43.478 0.00 0.00 0.00 3.55
2126 4773 4.553330 ATCGACCACTTGTAAGACCATT 57.447 40.909 0.00 0.00 0.00 3.16
2127 4774 3.659786 TCGACCACTTGTAAGACCATTG 58.340 45.455 0.00 0.00 0.00 2.82
2128 4775 3.322541 TCGACCACTTGTAAGACCATTGA 59.677 43.478 0.00 0.00 0.00 2.57
2129 4776 4.062293 CGACCACTTGTAAGACCATTGAA 58.938 43.478 0.00 0.00 0.00 2.69
2130 4777 4.695455 CGACCACTTGTAAGACCATTGAAT 59.305 41.667 0.00 0.00 0.00 2.57
2131 4778 5.181245 CGACCACTTGTAAGACCATTGAATT 59.819 40.000 0.00 0.00 0.00 2.17
2132 4779 6.575162 ACCACTTGTAAGACCATTGAATTC 57.425 37.500 0.00 0.00 0.00 2.17
2133 4780 6.306987 ACCACTTGTAAGACCATTGAATTCT 58.693 36.000 7.05 0.00 0.00 2.40
2134 4781 6.207417 ACCACTTGTAAGACCATTGAATTCTG 59.793 38.462 7.05 0.00 0.00 3.02
2135 4782 6.349611 CCACTTGTAAGACCATTGAATTCTGG 60.350 42.308 11.27 11.27 38.55 3.86
2136 4783 5.711976 ACTTGTAAGACCATTGAATTCTGGG 59.288 40.000 15.95 12.17 36.82 4.45
2137 4784 5.512942 TGTAAGACCATTGAATTCTGGGA 57.487 39.130 15.95 0.00 36.82 4.37
2138 4785 5.886609 TGTAAGACCATTGAATTCTGGGAA 58.113 37.500 15.95 0.00 36.82 3.97
2139 4786 6.310941 TGTAAGACCATTGAATTCTGGGAAA 58.689 36.000 15.95 0.00 36.82 3.13
2140 4787 6.780031 TGTAAGACCATTGAATTCTGGGAAAA 59.220 34.615 15.95 0.00 36.82 2.29
2141 4788 5.728637 AGACCATTGAATTCTGGGAAAAC 57.271 39.130 15.95 4.69 36.82 2.43
2142 4789 4.528206 AGACCATTGAATTCTGGGAAAACC 59.472 41.667 15.95 0.00 36.82 3.27
2143 4790 3.582647 ACCATTGAATTCTGGGAAAACCC 59.417 43.478 15.95 0.00 39.07 4.11
2144 4791 3.582208 CCATTGAATTCTGGGAAAACCCA 59.418 43.478 7.05 7.78 39.07 4.51
2153 4800 3.508845 TGGGAAAACCCAGAGAGAAAG 57.491 47.619 3.67 0.00 39.07 2.62
2154 4801 2.163509 GGGAAAACCCAGAGAGAAAGC 58.836 52.381 0.00 0.00 36.34 3.51
2155 4802 2.224892 GGGAAAACCCAGAGAGAAAGCT 60.225 50.000 0.00 0.00 36.34 3.74
2156 4803 3.078097 GGAAAACCCAGAGAGAAAGCTC 58.922 50.000 0.00 0.00 36.78 4.09
2157 4804 2.869101 AAACCCAGAGAGAAAGCTCC 57.131 50.000 0.00 0.00 42.30 4.70
2158 4805 0.988063 AACCCAGAGAGAAAGCTCCC 59.012 55.000 0.00 0.00 42.30 4.30
2159 4806 0.178891 ACCCAGAGAGAAAGCTCCCA 60.179 55.000 0.00 0.00 42.30 4.37
2160 4807 0.987294 CCCAGAGAGAAAGCTCCCAA 59.013 55.000 0.00 0.00 42.30 4.12
2161 4808 1.352352 CCCAGAGAGAAAGCTCCCAAA 59.648 52.381 0.00 0.00 42.30 3.28
2162 4809 2.224867 CCCAGAGAGAAAGCTCCCAAAA 60.225 50.000 0.00 0.00 42.30 2.44
2163 4810 3.490348 CCAGAGAGAAAGCTCCCAAAAA 58.510 45.455 0.00 0.00 42.30 1.94
2164 4811 4.085009 CCAGAGAGAAAGCTCCCAAAAAT 58.915 43.478 0.00 0.00 42.30 1.82
2165 4812 5.256474 CCAGAGAGAAAGCTCCCAAAAATA 58.744 41.667 0.00 0.00 42.30 1.40
2166 4813 5.711976 CCAGAGAGAAAGCTCCCAAAAATAA 59.288 40.000 0.00 0.00 42.30 1.40
2167 4814 6.379417 CCAGAGAGAAAGCTCCCAAAAATAAT 59.621 38.462 0.00 0.00 42.30 1.28
2168 4815 7.093596 CCAGAGAGAAAGCTCCCAAAAATAATT 60.094 37.037 0.00 0.00 42.30 1.40
2169 4816 8.309656 CAGAGAGAAAGCTCCCAAAAATAATTT 58.690 33.333 0.00 0.00 42.30 1.82
2170 4817 9.533831 AGAGAGAAAGCTCCCAAAAATAATTTA 57.466 29.630 0.00 0.00 42.30 1.40
2173 4820 9.317936 GAGAAAGCTCCCAAAAATAATTTATGG 57.682 33.333 0.00 0.00 35.01 2.74
2174 4821 9.045745 AGAAAGCTCCCAAAAATAATTTATGGA 57.954 29.630 0.00 1.60 32.78 3.41
2175 4822 9.836864 GAAAGCTCCCAAAAATAATTTATGGAT 57.163 29.630 0.00 0.00 32.78 3.41
2191 4838 8.888836 ATTTATGGATTATGAGCATTCATGGA 57.111 30.769 0.00 0.00 43.76 3.41
2192 4839 8.709272 TTTATGGATTATGAGCATTCATGGAA 57.291 30.769 0.00 0.00 43.76 3.53
2193 4840 6.835819 ATGGATTATGAGCATTCATGGAAG 57.164 37.500 0.00 0.00 43.76 3.46
2194 4841 5.944135 TGGATTATGAGCATTCATGGAAGA 58.056 37.500 0.00 0.00 43.76 2.87
2195 4842 6.549242 TGGATTATGAGCATTCATGGAAGAT 58.451 36.000 0.00 0.00 43.76 2.40
2196 4843 6.657966 TGGATTATGAGCATTCATGGAAGATC 59.342 38.462 0.00 0.00 43.76 2.75
2197 4844 6.657966 GGATTATGAGCATTCATGGAAGATCA 59.342 38.462 0.00 0.00 43.76 2.92
2198 4845 7.339721 GGATTATGAGCATTCATGGAAGATCAT 59.660 37.037 13.97 13.97 43.76 2.45
2199 4846 8.651589 ATTATGAGCATTCATGGAAGATCATT 57.348 30.769 14.64 0.00 43.76 2.57
2200 4847 5.767816 TGAGCATTCATGGAAGATCATTG 57.232 39.130 0.00 0.00 0.00 2.82
2201 4848 5.198207 TGAGCATTCATGGAAGATCATTGT 58.802 37.500 0.00 0.00 0.00 2.71
2202 4849 6.358991 TGAGCATTCATGGAAGATCATTGTA 58.641 36.000 0.00 0.00 0.00 2.41
2203 4850 7.002276 TGAGCATTCATGGAAGATCATTGTAT 58.998 34.615 0.00 0.00 0.00 2.29
2204 4851 8.158789 TGAGCATTCATGGAAGATCATTGTATA 58.841 33.333 0.00 0.00 0.00 1.47
2205 4852 8.332996 AGCATTCATGGAAGATCATTGTATAC 57.667 34.615 0.00 0.00 0.00 1.47
2206 4853 7.392673 AGCATTCATGGAAGATCATTGTATACC 59.607 37.037 0.00 0.00 0.00 2.73
2207 4854 7.362401 GCATTCATGGAAGATCATTGTATACCC 60.362 40.741 0.00 0.00 0.00 3.69
2208 4855 7.392766 TTCATGGAAGATCATTGTATACCCT 57.607 36.000 0.00 0.00 0.00 4.34
2209 4856 7.392766 TCATGGAAGATCATTGTATACCCTT 57.607 36.000 0.00 0.00 0.00 3.95
2210 4857 7.815383 TCATGGAAGATCATTGTATACCCTTT 58.185 34.615 0.00 0.00 0.00 3.11
2211 4858 8.281531 TCATGGAAGATCATTGTATACCCTTTT 58.718 33.333 0.00 0.00 0.00 2.27
2212 4859 7.880160 TGGAAGATCATTGTATACCCTTTTG 57.120 36.000 0.00 0.00 0.00 2.44
2213 4860 6.321181 TGGAAGATCATTGTATACCCTTTTGC 59.679 38.462 0.00 0.00 0.00 3.68
2214 4861 6.321181 GGAAGATCATTGTATACCCTTTTGCA 59.679 38.462 0.00 0.00 0.00 4.08
2215 4862 7.014615 GGAAGATCATTGTATACCCTTTTGCAT 59.985 37.037 0.00 0.00 0.00 3.96
2216 4863 7.516198 AGATCATTGTATACCCTTTTGCATC 57.484 36.000 0.00 0.00 0.00 3.91
2217 4864 7.062322 AGATCATTGTATACCCTTTTGCATCA 58.938 34.615 0.00 0.00 0.00 3.07
2218 4865 7.560991 AGATCATTGTATACCCTTTTGCATCAA 59.439 33.333 0.00 0.00 0.00 2.57
2219 4866 7.658525 TCATTGTATACCCTTTTGCATCAAT 57.341 32.000 0.00 0.00 0.00 2.57
2220 4867 8.759481 TCATTGTATACCCTTTTGCATCAATA 57.241 30.769 0.00 0.00 0.00 1.90
2221 4868 9.365906 TCATTGTATACCCTTTTGCATCAATAT 57.634 29.630 0.00 0.00 0.00 1.28
2247 4894 8.706322 ATTGAACTTCTTTTGTTACCCTATGT 57.294 30.769 0.00 0.00 0.00 2.29
2248 4895 8.528044 TTGAACTTCTTTTGTTACCCTATGTT 57.472 30.769 0.00 0.00 0.00 2.71
2249 4896 8.161699 TGAACTTCTTTTGTTACCCTATGTTC 57.838 34.615 0.00 0.00 0.00 3.18
2250 4897 7.229907 TGAACTTCTTTTGTTACCCTATGTTCC 59.770 37.037 0.00 0.00 0.00 3.62
2251 4898 6.008331 ACTTCTTTTGTTACCCTATGTTCCC 58.992 40.000 0.00 0.00 0.00 3.97
2252 4899 4.581868 TCTTTTGTTACCCTATGTTCCCG 58.418 43.478 0.00 0.00 0.00 5.14
2253 4900 4.041938 TCTTTTGTTACCCTATGTTCCCGT 59.958 41.667 0.00 0.00 0.00 5.28
2254 4901 3.615224 TTGTTACCCTATGTTCCCGTC 57.385 47.619 0.00 0.00 0.00 4.79
2255 4902 2.538222 TGTTACCCTATGTTCCCGTCA 58.462 47.619 0.00 0.00 0.00 4.35
2256 4903 2.234414 TGTTACCCTATGTTCCCGTCAC 59.766 50.000 0.00 0.00 0.00 3.67
2257 4904 1.488390 TACCCTATGTTCCCGTCACC 58.512 55.000 0.00 0.00 0.00 4.02
2258 4905 0.545787 ACCCTATGTTCCCGTCACCA 60.546 55.000 0.00 0.00 0.00 4.17
2259 4906 0.616371 CCCTATGTTCCCGTCACCAA 59.384 55.000 0.00 0.00 0.00 3.67
2260 4907 1.003812 CCCTATGTTCCCGTCACCAAA 59.996 52.381 0.00 0.00 0.00 3.28
2261 4908 2.356741 CCCTATGTTCCCGTCACCAAAT 60.357 50.000 0.00 0.00 0.00 2.32
2262 4909 3.352648 CCTATGTTCCCGTCACCAAATT 58.647 45.455 0.00 0.00 0.00 1.82
2263 4910 4.519213 CCTATGTTCCCGTCACCAAATTA 58.481 43.478 0.00 0.00 0.00 1.40
2264 4911 4.944930 CCTATGTTCCCGTCACCAAATTAA 59.055 41.667 0.00 0.00 0.00 1.40
2265 4912 5.065988 CCTATGTTCCCGTCACCAAATTAAG 59.934 44.000 0.00 0.00 0.00 1.85
2266 4913 3.150767 TGTTCCCGTCACCAAATTAAGG 58.849 45.455 0.00 0.00 0.00 2.69
2267 4914 2.490509 GTTCCCGTCACCAAATTAAGGG 59.509 50.000 2.32 0.00 38.73 3.95
2268 4915 1.706305 TCCCGTCACCAAATTAAGGGT 59.294 47.619 2.32 0.00 38.52 4.34
2269 4916 2.108601 TCCCGTCACCAAATTAAGGGTT 59.891 45.455 2.32 0.00 38.52 4.11
2270 4917 2.894765 CCCGTCACCAAATTAAGGGTTT 59.105 45.455 2.32 0.00 34.45 3.27
2271 4918 3.322541 CCCGTCACCAAATTAAGGGTTTT 59.677 43.478 2.32 0.00 34.45 2.43
2272 4919 4.202274 CCCGTCACCAAATTAAGGGTTTTT 60.202 41.667 2.32 0.00 34.45 1.94
2273 4920 4.986034 CCGTCACCAAATTAAGGGTTTTTC 59.014 41.667 2.32 0.00 34.45 2.29
2274 4921 5.221362 CCGTCACCAAATTAAGGGTTTTTCT 60.221 40.000 2.32 0.00 34.45 2.52
2275 4922 6.016108 CCGTCACCAAATTAAGGGTTTTTCTA 60.016 38.462 2.32 0.00 34.45 2.10
2276 4923 7.309560 CCGTCACCAAATTAAGGGTTTTTCTAT 60.310 37.037 2.32 0.00 34.45 1.98
2277 4924 7.753580 CGTCACCAAATTAAGGGTTTTTCTATC 59.246 37.037 2.32 0.00 34.45 2.08
2278 4925 8.581578 GTCACCAAATTAAGGGTTTTTCTATCA 58.418 33.333 2.32 0.00 34.45 2.15
2279 4926 9.148879 TCACCAAATTAAGGGTTTTTCTATCAA 57.851 29.630 2.32 0.00 34.45 2.57
2280 4927 9.942850 CACCAAATTAAGGGTTTTTCTATCAAT 57.057 29.630 2.32 0.00 34.45 2.57
2281 4928 9.942850 ACCAAATTAAGGGTTTTTCTATCAATG 57.057 29.630 2.32 0.00 32.12 2.82
2282 4929 9.942850 CCAAATTAAGGGTTTTTCTATCAATGT 57.057 29.630 0.00 0.00 0.00 2.71
2287 4934 6.267496 AGGGTTTTTCTATCAATGTTTCCG 57.733 37.500 0.00 0.00 0.00 4.30
2288 4935 4.862574 GGGTTTTTCTATCAATGTTTCCGC 59.137 41.667 0.00 0.00 0.00 5.54
2289 4936 5.465935 GGTTTTTCTATCAATGTTTCCGCA 58.534 37.500 0.00 0.00 0.00 5.69
2290 4937 6.099341 GGTTTTTCTATCAATGTTTCCGCAT 58.901 36.000 0.00 0.00 0.00 4.73
2291 4938 7.254852 GGTTTTTCTATCAATGTTTCCGCATA 58.745 34.615 0.00 0.00 0.00 3.14
2292 4939 7.920682 GGTTTTTCTATCAATGTTTCCGCATAT 59.079 33.333 0.00 0.00 0.00 1.78
2293 4940 9.301153 GTTTTTCTATCAATGTTTCCGCATATT 57.699 29.630 0.00 0.00 0.00 1.28
2294 4941 9.868277 TTTTTCTATCAATGTTTCCGCATATTT 57.132 25.926 0.00 0.00 0.00 1.40
2295 4942 9.868277 TTTTCTATCAATGTTTCCGCATATTTT 57.132 25.926 0.00 0.00 0.00 1.82
2296 4943 9.868277 TTTCTATCAATGTTTCCGCATATTTTT 57.132 25.926 0.00 0.00 0.00 1.94
2297 4944 8.854979 TCTATCAATGTTTCCGCATATTTTTG 57.145 30.769 0.00 0.00 0.00 2.44
2298 4945 8.681806 TCTATCAATGTTTCCGCATATTTTTGA 58.318 29.630 0.00 0.00 0.00 2.69
2299 4946 9.467258 CTATCAATGTTTCCGCATATTTTTGAT 57.533 29.630 0.00 0.00 30.85 2.57
2301 4948 9.985730 ATCAATGTTTCCGCATATTTTTGATAT 57.014 25.926 0.00 0.00 0.00 1.63
2328 4975 7.771927 ATTCAAGCATTCCCATATCTTAAGG 57.228 36.000 1.85 0.00 0.00 2.69
2329 4976 5.072741 TCAAGCATTCCCATATCTTAAGGC 58.927 41.667 1.85 0.00 0.00 4.35
2330 4977 4.729552 AGCATTCCCATATCTTAAGGCA 57.270 40.909 1.85 0.00 31.46 4.75
2331 4978 5.065613 AGCATTCCCATATCTTAAGGCAA 57.934 39.130 1.85 0.00 31.46 4.52
2332 4979 4.829492 AGCATTCCCATATCTTAAGGCAAC 59.171 41.667 1.85 0.00 31.46 4.17
2333 4980 4.584325 GCATTCCCATATCTTAAGGCAACA 59.416 41.667 1.85 0.00 41.41 3.33
2334 4981 5.068987 GCATTCCCATATCTTAAGGCAACAA 59.931 40.000 1.85 0.00 41.41 2.83
2335 4982 6.239402 GCATTCCCATATCTTAAGGCAACAAT 60.239 38.462 1.85 0.00 41.41 2.71
2336 4983 7.687592 GCATTCCCATATCTTAAGGCAACAATT 60.688 37.037 1.85 0.00 41.41 2.32
2337 4984 6.959639 TCCCATATCTTAAGGCAACAATTC 57.040 37.500 1.85 0.00 41.41 2.17
2338 4985 5.833131 TCCCATATCTTAAGGCAACAATTCC 59.167 40.000 1.85 0.00 41.41 3.01
2339 4986 5.011023 CCCATATCTTAAGGCAACAATTCCC 59.989 44.000 1.85 0.00 41.41 3.97
2340 4987 5.011023 CCATATCTTAAGGCAACAATTCCCC 59.989 44.000 1.85 0.00 41.41 4.81
2341 4988 3.534357 TCTTAAGGCAACAATTCCCCA 57.466 42.857 1.85 0.00 41.41 4.96
2342 4989 4.059773 TCTTAAGGCAACAATTCCCCAT 57.940 40.909 1.85 0.00 41.41 4.00
2343 4990 4.424842 TCTTAAGGCAACAATTCCCCATT 58.575 39.130 1.85 0.00 41.41 3.16
2345 4992 2.323999 AGGCAACAATTCCCCATTGA 57.676 45.000 1.59 0.00 44.78 2.57
2346 4993 1.901833 AGGCAACAATTCCCCATTGAC 59.098 47.619 1.59 0.00 44.78 3.18
2347 4994 1.066215 GGCAACAATTCCCCATTGACC 60.066 52.381 1.59 0.00 44.78 4.02
2348 4995 1.066215 GCAACAATTCCCCATTGACCC 60.066 52.381 1.59 0.00 44.78 4.46
2349 4996 2.539302 CAACAATTCCCCATTGACCCT 58.461 47.619 1.59 0.00 44.78 4.34
2350 4997 2.234414 CAACAATTCCCCATTGACCCTG 59.766 50.000 1.59 0.00 44.78 4.45
2351 4998 1.715931 ACAATTCCCCATTGACCCTGA 59.284 47.619 1.59 0.00 44.78 3.86
2352 4999 2.111613 ACAATTCCCCATTGACCCTGAA 59.888 45.455 1.59 0.00 44.78 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 119 9.131791 TCATACTAGTTCATAGCAGTTCATACA 57.868 33.333 0.00 0.00 34.56 2.29
177 186 3.416119 GATATATTCGATCCACGGCGA 57.584 47.619 16.62 0.00 42.82 5.54
225 234 3.191581 CGGTAAGCACTTCTCTCTCTTCA 59.808 47.826 0.00 0.00 0.00 3.02
294 303 2.189521 GGATTCCATCACCGGCGT 59.810 61.111 6.01 0.00 0.00 5.68
308 317 1.196012 GAGGAAGAAGACCACCGGAT 58.804 55.000 9.46 0.00 0.00 4.18
368 377 0.338120 CTCCCTCTCCCCACTCTTCT 59.662 60.000 0.00 0.00 0.00 2.85
435 445 4.069232 CACCCTCGAGAAGCCGCA 62.069 66.667 15.71 0.00 0.00 5.69
497 507 1.813862 CGACAGTTTCTTCAGGGCCAA 60.814 52.381 6.18 0.00 0.00 4.52
524 534 2.743718 CTGCCTCAGTGGGAACGT 59.256 61.111 0.00 0.00 35.09 3.99
533 543 0.535328 CATCTCATGGCCTGCCTCAG 60.535 60.000 9.97 2.80 36.94 3.35
583 593 1.065053 TGTTTGGTAGCCCGCATACAT 60.065 47.619 0.00 0.00 0.00 2.29
665 675 2.273179 ACATGTTGGCTGCAGCAGG 61.273 57.895 37.63 22.29 44.36 4.85
666 676 1.080772 CACATGTTGGCTGCAGCAG 60.081 57.895 37.63 18.93 44.36 4.24
676 686 1.677576 ACTTGTCCAGTGCACATGTTG 59.322 47.619 21.04 8.30 32.83 3.33
677 687 2.057137 ACTTGTCCAGTGCACATGTT 57.943 45.000 21.04 0.00 32.83 2.71
741 757 1.486310 GAAAGGGGGCCATTTCCATTC 59.514 52.381 18.03 9.66 30.74 2.67
750 766 1.482365 GGAAAGAAAGAAAGGGGGCCA 60.482 52.381 4.39 0.00 0.00 5.36
760 776 3.461831 TCCAAGTCCAAGGGAAAGAAAGA 59.538 43.478 0.00 0.00 31.38 2.52
869 903 2.426738 TCACAGTGCACTTTCTTTTGGG 59.573 45.455 18.94 6.24 0.00 4.12
870 904 3.438360 GTCACAGTGCACTTTCTTTTGG 58.562 45.455 18.94 5.76 0.00 3.28
871 905 3.100817 CGTCACAGTGCACTTTCTTTTG 58.899 45.455 18.94 7.60 0.00 2.44
876 910 1.295792 TTCCGTCACAGTGCACTTTC 58.704 50.000 18.94 6.93 0.00 2.62
883 933 1.787847 GCCGAATTCCGTCACAGTG 59.212 57.895 0.00 0.00 36.31 3.66
890 948 2.596553 TTATGGCCGCCGAATTCCGT 62.597 55.000 4.58 0.00 36.31 4.69
913 971 1.940883 TACTTGCCGAGCCACCGTAG 61.941 60.000 0.00 0.00 0.00 3.51
919 977 1.153369 GCTGATACTTGCCGAGCCA 60.153 57.895 0.00 0.00 0.00 4.75
921 979 3.724494 GGCTGATACTTGCCGAGC 58.276 61.111 0.00 0.00 39.71 5.03
974 1368 3.782042 GTCTTTGGCTAGACGGCG 58.218 61.111 4.80 4.80 42.02 6.46
980 1525 4.358851 CATTCTCTCGAGTCTTTGGCTAG 58.641 47.826 13.13 0.00 0.00 3.42
986 1531 3.119173 CCTCTGCATTCTCTCGAGTCTTT 60.119 47.826 13.13 0.00 0.00 2.52
987 1532 2.426738 CCTCTGCATTCTCTCGAGTCTT 59.573 50.000 13.13 0.00 0.00 3.01
1052 1655 1.925972 GCCTCCAGGTCCTCCCTTT 60.926 63.158 0.00 0.00 42.73 3.11
1053 1656 2.285743 GCCTCCAGGTCCTCCCTT 60.286 66.667 0.00 0.00 42.73 3.95
1220 2303 1.260561 CAAGACGTTTGCTGCGTAGTT 59.739 47.619 1.53 0.00 43.04 2.24
1221 2304 0.859232 CAAGACGTTTGCTGCGTAGT 59.141 50.000 1.53 0.00 43.04 2.73
1224 2307 1.459592 GTATCAAGACGTTTGCTGCGT 59.540 47.619 0.00 0.90 45.86 5.24
1384 3706 1.622811 AGTTCTTCAGCTCCTGTCAGG 59.377 52.381 13.21 13.21 36.46 3.86
1385 3707 2.298446 TCAGTTCTTCAGCTCCTGTCAG 59.702 50.000 0.00 0.00 32.61 3.51
1391 3713 1.403514 CGTCCTCAGTTCTTCAGCTCC 60.404 57.143 0.00 0.00 0.00 4.70
1397 3721 2.846039 TATCGCGTCCTCAGTTCTTC 57.154 50.000 5.77 0.00 0.00 2.87
1434 3765 7.284034 TGAGATCAAGAAAGAAAGCAGAAAACT 59.716 33.333 0.00 0.00 0.00 2.66
1487 4107 4.786609 GCTTTATTATTGGTGCAGCGAGAC 60.787 45.833 12.16 0.00 0.00 3.36
1512 4132 5.106357 ACACAATTATTGCGTTCTGTATGCA 60.106 36.000 4.68 0.00 46.82 3.96
1530 4150 0.602562 CGGCCATGAAACCACACAAT 59.397 50.000 2.24 0.00 0.00 2.71
1535 4178 2.961768 CACCGGCCATGAAACCAC 59.038 61.111 0.00 0.00 0.00 4.16
1560 4205 2.027653 TCACCGCACAATTATGAGTGGA 60.028 45.455 11.83 0.00 46.87 4.02
1594 4239 4.351874 ACCCTCTTGAACGAAGAAATGA 57.648 40.909 0.00 0.00 40.33 2.57
1640 4285 1.646447 AGGGGTAGATGAGTCTGGACA 59.354 52.381 3.51 0.00 35.87 4.02
1642 4287 1.930204 TCAGGGGTAGATGAGTCTGGA 59.070 52.381 0.00 0.00 35.87 3.86
1644 4289 3.570540 TCATCAGGGGTAGATGAGTCTG 58.429 50.000 2.00 0.00 44.98 3.51
1703 4350 7.013846 TCACCTTTAATGTGTAAAACCTTCAGG 59.986 37.037 0.73 0.00 36.80 3.86
1709 4356 7.739498 TCTCTCACCTTTAATGTGTAAAACC 57.261 36.000 0.73 0.00 35.25 3.27
1710 4357 9.827411 GATTCTCTCACCTTTAATGTGTAAAAC 57.173 33.333 0.73 0.00 35.25 2.43
1726 4373 3.129638 ACGCACCTAGAAGATTCTCTCAC 59.870 47.826 0.00 0.00 38.70 3.51
1744 4391 3.257393 ACACTTTGAAATTTTGCACGCA 58.743 36.364 0.00 0.00 0.00 5.24
1747 4394 6.020984 GTCCAAACACTTTGAAATTTTGCAC 58.979 36.000 0.00 0.00 43.26 4.57
1750 4397 9.063739 CAAATGTCCAAACACTTTGAAATTTTG 57.936 29.630 0.00 0.00 43.26 2.44
1769 4416 0.804989 CCACGGGCTTCTCAAATGTC 59.195 55.000 0.00 0.00 0.00 3.06
1799 4446 1.204941 GTGCACTCTGTAGACCGGATT 59.795 52.381 9.46 0.00 0.00 3.01
1800 4447 0.818296 GTGCACTCTGTAGACCGGAT 59.182 55.000 9.46 0.00 0.00 4.18
1805 4452 5.734855 TTCAAAAAGTGCACTCTGTAGAC 57.265 39.130 21.95 0.00 0.00 2.59
1812 4459 6.951256 AAGAAACTTTCAAAAAGTGCACTC 57.049 33.333 21.95 2.57 0.00 3.51
1818 4465 8.556194 GGTTTGTCAAAGAAACTTTCAAAAAGT 58.444 29.630 0.00 0.00 34.36 2.66
1841 4488 8.943909 TCGTGGTAAAAATAACAAATTTGGTT 57.056 26.923 21.74 14.89 0.00 3.67
1842 4489 7.170151 GCTCGTGGTAAAAATAACAAATTTGGT 59.830 33.333 21.74 18.24 0.00 3.67
1855 4502 5.759506 TTTTGATGAGCTCGTGGTAAAAA 57.240 34.783 14.59 11.32 0.00 1.94
1860 4507 2.749621 GGAATTTTGATGAGCTCGTGGT 59.250 45.455 14.59 0.00 0.00 4.16
1881 4528 4.576678 CGTGCCAAATTTCAAGTTGTTTG 58.423 39.130 2.11 6.61 38.17 2.93
1887 4534 1.537990 GGTGCGTGCCAAATTTCAAGT 60.538 47.619 0.00 0.00 0.00 3.16
1941 4588 8.844244 CCACCCATCAATTTAAAACAATTTGAA 58.156 29.630 2.79 0.00 0.00 2.69
1942 4589 8.213679 TCCACCCATCAATTTAAAACAATTTGA 58.786 29.630 2.79 4.19 0.00 2.69
1943 4590 8.388484 TCCACCCATCAATTTAAAACAATTTG 57.612 30.769 0.00 0.00 0.00 2.32
1944 4591 8.845227 GTTCCACCCATCAATTTAAAACAATTT 58.155 29.630 0.00 0.00 0.00 1.82
1945 4592 8.217111 AGTTCCACCCATCAATTTAAAACAATT 58.783 29.630 0.00 0.00 0.00 2.32
1946 4593 7.661027 CAGTTCCACCCATCAATTTAAAACAAT 59.339 33.333 0.00 0.00 0.00 2.71
1947 4594 6.989169 CAGTTCCACCCATCAATTTAAAACAA 59.011 34.615 0.00 0.00 0.00 2.83
1948 4595 6.463614 CCAGTTCCACCCATCAATTTAAAACA 60.464 38.462 0.00 0.00 0.00 2.83
1949 4596 5.931724 CCAGTTCCACCCATCAATTTAAAAC 59.068 40.000 0.00 0.00 0.00 2.43
1950 4597 5.841237 TCCAGTTCCACCCATCAATTTAAAA 59.159 36.000 0.00 0.00 0.00 1.52
1951 4598 5.398236 TCCAGTTCCACCCATCAATTTAAA 58.602 37.500 0.00 0.00 0.00 1.52
1952 4599 5.004361 TCCAGTTCCACCCATCAATTTAA 57.996 39.130 0.00 0.00 0.00 1.52
1953 4600 4.666412 TCCAGTTCCACCCATCAATTTA 57.334 40.909 0.00 0.00 0.00 1.40
1954 4601 3.541242 TCCAGTTCCACCCATCAATTT 57.459 42.857 0.00 0.00 0.00 1.82
1955 4602 3.434309 CTTCCAGTTCCACCCATCAATT 58.566 45.455 0.00 0.00 0.00 2.32
1956 4603 2.885554 GCTTCCAGTTCCACCCATCAAT 60.886 50.000 0.00 0.00 0.00 2.57
1957 4604 1.547675 GCTTCCAGTTCCACCCATCAA 60.548 52.381 0.00 0.00 0.00 2.57
1958 4605 0.038166 GCTTCCAGTTCCACCCATCA 59.962 55.000 0.00 0.00 0.00 3.07
1959 4606 0.038166 TGCTTCCAGTTCCACCCATC 59.962 55.000 0.00 0.00 0.00 3.51
1960 4607 0.706433 ATGCTTCCAGTTCCACCCAT 59.294 50.000 0.00 0.00 0.00 4.00
1961 4608 0.251297 CATGCTTCCAGTTCCACCCA 60.251 55.000 0.00 0.00 0.00 4.51
1962 4609 0.038166 TCATGCTTCCAGTTCCACCC 59.962 55.000 0.00 0.00 0.00 4.61
1963 4610 1.541588 GTTCATGCTTCCAGTTCCACC 59.458 52.381 0.00 0.00 0.00 4.61
1964 4611 2.227388 CAGTTCATGCTTCCAGTTCCAC 59.773 50.000 0.00 0.00 0.00 4.02
1965 4612 2.158623 ACAGTTCATGCTTCCAGTTCCA 60.159 45.455 0.00 0.00 0.00 3.53
1966 4613 2.508526 ACAGTTCATGCTTCCAGTTCC 58.491 47.619 0.00 0.00 0.00 3.62
1967 4614 4.574599 AAACAGTTCATGCTTCCAGTTC 57.425 40.909 0.00 0.00 0.00 3.01
1968 4615 5.343307 AAAAACAGTTCATGCTTCCAGTT 57.657 34.783 0.00 0.00 0.00 3.16
1987 4634 5.879777 CCCTGCCTCAAAAAGAAAAGAAAAA 59.120 36.000 0.00 0.00 0.00 1.94
1988 4635 5.188751 TCCCTGCCTCAAAAAGAAAAGAAAA 59.811 36.000 0.00 0.00 0.00 2.29
1989 4636 4.714308 TCCCTGCCTCAAAAAGAAAAGAAA 59.286 37.500 0.00 0.00 0.00 2.52
1990 4637 4.285863 TCCCTGCCTCAAAAAGAAAAGAA 58.714 39.130 0.00 0.00 0.00 2.52
1991 4638 3.909732 TCCCTGCCTCAAAAAGAAAAGA 58.090 40.909 0.00 0.00 0.00 2.52
1992 4639 4.100035 ACTTCCCTGCCTCAAAAAGAAAAG 59.900 41.667 0.00 0.00 0.00 2.27
1993 4640 4.030216 ACTTCCCTGCCTCAAAAAGAAAA 58.970 39.130 0.00 0.00 0.00 2.29
1994 4641 3.384467 CACTTCCCTGCCTCAAAAAGAAA 59.616 43.478 0.00 0.00 0.00 2.52
1995 4642 2.958355 CACTTCCCTGCCTCAAAAAGAA 59.042 45.455 0.00 0.00 0.00 2.52
1996 4643 2.091885 ACACTTCCCTGCCTCAAAAAGA 60.092 45.455 0.00 0.00 0.00 2.52
1997 4644 2.035066 CACACTTCCCTGCCTCAAAAAG 59.965 50.000 0.00 0.00 0.00 2.27
1998 4645 2.031120 CACACTTCCCTGCCTCAAAAA 58.969 47.619 0.00 0.00 0.00 1.94
1999 4646 1.214175 TCACACTTCCCTGCCTCAAAA 59.786 47.619 0.00 0.00 0.00 2.44
2000 4647 0.843309 TCACACTTCCCTGCCTCAAA 59.157 50.000 0.00 0.00 0.00 2.69
2001 4648 0.843309 TTCACACTTCCCTGCCTCAA 59.157 50.000 0.00 0.00 0.00 3.02
2002 4649 0.108585 GTTCACACTTCCCTGCCTCA 59.891 55.000 0.00 0.00 0.00 3.86
2003 4650 0.398318 AGTTCACACTTCCCTGCCTC 59.602 55.000 0.00 0.00 0.00 4.70
2004 4651 0.846693 AAGTTCACACTTCCCTGCCT 59.153 50.000 0.00 0.00 39.15 4.75
2005 4652 0.954452 CAAGTTCACACTTCCCTGCC 59.046 55.000 0.00 0.00 41.69 4.85
2006 4653 1.334869 CACAAGTTCACACTTCCCTGC 59.665 52.381 0.00 0.00 41.69 4.85
2007 4654 2.917933 TCACAAGTTCACACTTCCCTG 58.082 47.619 0.00 0.00 41.69 4.45
2008 4655 3.199946 TCTTCACAAGTTCACACTTCCCT 59.800 43.478 0.00 0.00 41.69 4.20
2009 4656 3.541632 TCTTCACAAGTTCACACTTCCC 58.458 45.455 0.00 0.00 41.69 3.97
2010 4657 3.561725 CCTCTTCACAAGTTCACACTTCC 59.438 47.826 0.00 0.00 41.69 3.46
2011 4658 3.002759 GCCTCTTCACAAGTTCACACTTC 59.997 47.826 0.00 0.00 41.69 3.01
2012 4659 2.945668 GCCTCTTCACAAGTTCACACTT 59.054 45.455 0.00 0.00 44.72 3.16
2013 4660 2.092968 TGCCTCTTCACAAGTTCACACT 60.093 45.455 0.00 0.00 33.11 3.55
2014 4661 2.288666 TGCCTCTTCACAAGTTCACAC 58.711 47.619 0.00 0.00 0.00 3.82
2015 4662 2.708216 TGCCTCTTCACAAGTTCACA 57.292 45.000 0.00 0.00 0.00 3.58
2016 4663 2.880890 ACATGCCTCTTCACAAGTTCAC 59.119 45.455 0.00 0.00 0.00 3.18
2017 4664 3.213206 ACATGCCTCTTCACAAGTTCA 57.787 42.857 0.00 0.00 0.00 3.18
2018 4665 4.574599 AAACATGCCTCTTCACAAGTTC 57.425 40.909 0.00 0.00 0.00 3.01
2019 4666 4.441913 CCAAAACATGCCTCTTCACAAGTT 60.442 41.667 0.00 0.00 0.00 2.66
2020 4667 3.068590 CCAAAACATGCCTCTTCACAAGT 59.931 43.478 0.00 0.00 0.00 3.16
2021 4668 3.068590 ACCAAAACATGCCTCTTCACAAG 59.931 43.478 0.00 0.00 0.00 3.16
2022 4669 3.030291 ACCAAAACATGCCTCTTCACAA 58.970 40.909 0.00 0.00 0.00 3.33
2023 4670 2.665165 ACCAAAACATGCCTCTTCACA 58.335 42.857 0.00 0.00 0.00 3.58
2024 4671 3.733443 AACCAAAACATGCCTCTTCAC 57.267 42.857 0.00 0.00 0.00 3.18
2025 4672 3.243367 CGAAACCAAAACATGCCTCTTCA 60.243 43.478 0.00 0.00 0.00 3.02
2026 4673 3.243401 ACGAAACCAAAACATGCCTCTTC 60.243 43.478 0.00 0.00 0.00 2.87
2027 4674 2.693074 ACGAAACCAAAACATGCCTCTT 59.307 40.909 0.00 0.00 0.00 2.85
2028 4675 2.306847 ACGAAACCAAAACATGCCTCT 58.693 42.857 0.00 0.00 0.00 3.69
2029 4676 2.793278 ACGAAACCAAAACATGCCTC 57.207 45.000 0.00 0.00 0.00 4.70
2030 4677 2.482839 CCAACGAAACCAAAACATGCCT 60.483 45.455 0.00 0.00 0.00 4.75
2031 4678 1.864082 CCAACGAAACCAAAACATGCC 59.136 47.619 0.00 0.00 0.00 4.40
2032 4679 1.260297 GCCAACGAAACCAAAACATGC 59.740 47.619 0.00 0.00 0.00 4.06
2033 4680 1.864082 GGCCAACGAAACCAAAACATG 59.136 47.619 0.00 0.00 0.00 3.21
2034 4681 1.482593 TGGCCAACGAAACCAAAACAT 59.517 42.857 0.61 0.00 0.00 2.71
2035 4682 0.895530 TGGCCAACGAAACCAAAACA 59.104 45.000 0.61 0.00 0.00 2.83
2036 4683 2.232756 ATGGCCAACGAAACCAAAAC 57.767 45.000 10.96 0.00 36.94 2.43
2037 4684 4.310769 CATTATGGCCAACGAAACCAAAA 58.689 39.130 10.96 0.00 36.94 2.44
2038 4685 3.862642 GCATTATGGCCAACGAAACCAAA 60.863 43.478 10.96 0.00 36.94 3.28
2039 4686 2.353208 GCATTATGGCCAACGAAACCAA 60.353 45.455 10.96 0.00 36.94 3.67
2040 4687 1.203523 GCATTATGGCCAACGAAACCA 59.796 47.619 10.96 0.00 37.99 3.67
2041 4688 1.203523 TGCATTATGGCCAACGAAACC 59.796 47.619 10.96 0.97 0.00 3.27
2042 4689 2.645730 TGCATTATGGCCAACGAAAC 57.354 45.000 10.96 0.00 0.00 2.78
2043 4690 2.738000 GCATGCATTATGGCCAACGAAA 60.738 45.455 10.96 2.11 37.26 3.46
2044 4691 1.202394 GCATGCATTATGGCCAACGAA 60.202 47.619 10.96 4.82 37.26 3.85
2045 4692 0.385029 GCATGCATTATGGCCAACGA 59.615 50.000 10.96 0.00 37.26 3.85
2046 4693 0.935831 CGCATGCATTATGGCCAACG 60.936 55.000 19.57 0.00 37.26 4.10
2047 4694 0.385029 TCGCATGCATTATGGCCAAC 59.615 50.000 19.57 0.00 37.26 3.77
2048 4695 0.669619 CTCGCATGCATTATGGCCAA 59.330 50.000 19.57 0.00 37.26 4.52
2049 4696 1.174078 CCTCGCATGCATTATGGCCA 61.174 55.000 19.57 8.56 37.26 5.36
2050 4697 1.582968 CCTCGCATGCATTATGGCC 59.417 57.895 19.57 0.00 37.26 5.36
2051 4698 1.080974 GCCTCGCATGCATTATGGC 60.081 57.895 19.57 17.74 37.26 4.40
2052 4699 0.956633 AAGCCTCGCATGCATTATGG 59.043 50.000 19.57 12.13 37.26 2.74
2053 4700 1.878088 AGAAGCCTCGCATGCATTATG 59.122 47.619 19.57 0.14 39.88 1.90
2054 4701 2.267174 AGAAGCCTCGCATGCATTAT 57.733 45.000 19.57 0.00 0.00 1.28
2055 4702 2.908688 TAGAAGCCTCGCATGCATTA 57.091 45.000 19.57 0.99 0.00 1.90
2056 4703 1.945394 CTTAGAAGCCTCGCATGCATT 59.055 47.619 19.57 3.65 0.00 3.56
2057 4704 1.139654 TCTTAGAAGCCTCGCATGCAT 59.860 47.619 19.57 0.00 0.00 3.96
2058 4705 0.536724 TCTTAGAAGCCTCGCATGCA 59.463 50.000 19.57 4.02 0.00 3.96
2059 4706 1.530293 CATCTTAGAAGCCTCGCATGC 59.470 52.381 7.91 7.91 0.00 4.06
2060 4707 2.141517 CCATCTTAGAAGCCTCGCATG 58.858 52.381 0.00 0.00 0.00 4.06
2061 4708 1.071385 CCCATCTTAGAAGCCTCGCAT 59.929 52.381 0.00 0.00 0.00 4.73
2062 4709 0.465705 CCCATCTTAGAAGCCTCGCA 59.534 55.000 0.00 0.00 0.00 5.10
2063 4710 0.882484 GCCCATCTTAGAAGCCTCGC 60.882 60.000 0.00 0.00 0.00 5.03
2064 4711 0.755686 AGCCCATCTTAGAAGCCTCG 59.244 55.000 0.00 0.00 0.00 4.63
2065 4712 1.270041 CGAGCCCATCTTAGAAGCCTC 60.270 57.143 0.00 0.00 0.00 4.70
2066 4713 0.755686 CGAGCCCATCTTAGAAGCCT 59.244 55.000 0.00 0.00 0.00 4.58
2067 4714 0.250081 CCGAGCCCATCTTAGAAGCC 60.250 60.000 0.00 0.00 0.00 4.35
2068 4715 0.250081 CCCGAGCCCATCTTAGAAGC 60.250 60.000 0.00 0.00 0.00 3.86
2069 4716 1.123928 ACCCGAGCCCATCTTAGAAG 58.876 55.000 0.00 0.00 0.00 2.85
2070 4717 2.464796 TACCCGAGCCCATCTTAGAA 57.535 50.000 0.00 0.00 0.00 2.10
2071 4718 2.696526 ATACCCGAGCCCATCTTAGA 57.303 50.000 0.00 0.00 0.00 2.10
2072 4719 3.056035 GGTAATACCCGAGCCCATCTTAG 60.056 52.174 0.00 0.00 30.04 2.18
2073 4720 2.901839 GGTAATACCCGAGCCCATCTTA 59.098 50.000 0.00 0.00 30.04 2.10
2074 4721 1.697982 GGTAATACCCGAGCCCATCTT 59.302 52.381 0.00 0.00 30.04 2.40
2075 4722 1.349067 GGTAATACCCGAGCCCATCT 58.651 55.000 0.00 0.00 30.04 2.90
2076 4723 3.929660 GGTAATACCCGAGCCCATC 57.070 57.895 0.00 0.00 30.04 3.51
2085 4732 1.007387 CGCCCGTACGGTAATACCC 60.007 63.158 31.24 10.25 33.75 3.69
2086 4733 0.383949 TTCGCCCGTACGGTAATACC 59.616 55.000 31.24 11.85 34.05 2.73
2087 4734 2.319472 GATTCGCCCGTACGGTAATAC 58.681 52.381 31.24 14.58 0.00 1.89
2088 4735 1.069296 CGATTCGCCCGTACGGTAATA 60.069 52.381 31.24 15.13 0.00 0.98
2089 4736 0.318107 CGATTCGCCCGTACGGTAAT 60.318 55.000 31.24 25.06 0.00 1.89
2090 4737 1.063972 CGATTCGCCCGTACGGTAA 59.936 57.895 31.24 21.87 0.00 2.85
2091 4738 1.817520 TCGATTCGCCCGTACGGTA 60.818 57.895 31.24 14.73 0.00 4.02
2092 4739 3.133464 TCGATTCGCCCGTACGGT 61.133 61.111 31.24 13.95 0.00 4.83
2093 4740 2.653130 GTCGATTCGCCCGTACGG 60.653 66.667 27.68 27.68 0.00 4.02
2094 4741 2.653130 GGTCGATTCGCCCGTACG 60.653 66.667 8.69 8.69 0.00 3.67
2095 4742 1.875364 GTGGTCGATTCGCCCGTAC 60.875 63.158 14.21 0.02 0.00 3.67
2096 4743 1.597797 AAGTGGTCGATTCGCCCGTA 61.598 55.000 14.21 0.00 0.00 4.02
2097 4744 2.939261 AAGTGGTCGATTCGCCCGT 61.939 57.895 14.21 0.00 0.00 5.28
2098 4745 2.125673 AAGTGGTCGATTCGCCCG 60.126 61.111 14.21 0.00 0.00 6.13
2099 4746 0.108520 TACAAGTGGTCGATTCGCCC 60.109 55.000 14.21 7.98 0.00 6.13
2100 4747 1.659098 CTTACAAGTGGTCGATTCGCC 59.341 52.381 0.00 6.87 0.00 5.54
2101 4748 2.344741 GTCTTACAAGTGGTCGATTCGC 59.655 50.000 0.00 0.00 0.00 4.70
2102 4749 2.921754 GGTCTTACAAGTGGTCGATTCG 59.078 50.000 0.00 0.00 0.00 3.34
2103 4750 3.921677 TGGTCTTACAAGTGGTCGATTC 58.078 45.455 0.00 0.00 0.00 2.52
2104 4751 4.553330 ATGGTCTTACAAGTGGTCGATT 57.447 40.909 0.00 0.00 0.00 3.34
2105 4752 4.020573 TCAATGGTCTTACAAGTGGTCGAT 60.021 41.667 0.00 0.00 0.00 3.59
2106 4753 3.322541 TCAATGGTCTTACAAGTGGTCGA 59.677 43.478 0.00 0.00 0.00 4.20
2107 4754 3.659786 TCAATGGTCTTACAAGTGGTCG 58.340 45.455 0.00 0.00 0.00 4.79
2108 4755 6.431234 AGAATTCAATGGTCTTACAAGTGGTC 59.569 38.462 8.44 0.00 0.00 4.02
2109 4756 6.207417 CAGAATTCAATGGTCTTACAAGTGGT 59.793 38.462 8.44 0.00 0.00 4.16
2110 4757 6.349611 CCAGAATTCAATGGTCTTACAAGTGG 60.350 42.308 8.44 0.00 0.00 4.00
2111 4758 6.349611 CCCAGAATTCAATGGTCTTACAAGTG 60.350 42.308 8.44 0.00 34.58 3.16
2112 4759 5.711976 CCCAGAATTCAATGGTCTTACAAGT 59.288 40.000 8.44 0.00 34.58 3.16
2113 4760 5.945784 TCCCAGAATTCAATGGTCTTACAAG 59.054 40.000 8.44 0.00 34.58 3.16
2114 4761 5.886609 TCCCAGAATTCAATGGTCTTACAA 58.113 37.500 8.44 0.00 34.58 2.41
2115 4762 5.512942 TCCCAGAATTCAATGGTCTTACA 57.487 39.130 8.44 0.00 34.58 2.41
2116 4763 6.834168 TTTCCCAGAATTCAATGGTCTTAC 57.166 37.500 8.44 0.00 34.58 2.34
2117 4764 6.210584 GGTTTTCCCAGAATTCAATGGTCTTA 59.789 38.462 8.44 0.00 34.58 2.10
2118 4765 5.012046 GGTTTTCCCAGAATTCAATGGTCTT 59.988 40.000 8.44 0.00 34.58 3.01
2119 4766 4.528206 GGTTTTCCCAGAATTCAATGGTCT 59.472 41.667 8.44 0.00 34.58 3.85
2120 4767 4.820897 GGTTTTCCCAGAATTCAATGGTC 58.179 43.478 8.44 0.00 34.58 4.02
2121 4768 4.890158 GGTTTTCCCAGAATTCAATGGT 57.110 40.909 8.44 0.00 34.58 3.55
2134 4781 4.120431 GAGCTTTCTCTCTGGGTTTTCCC 61.120 52.174 0.00 0.00 46.55 3.97
2135 4782 3.078097 GAGCTTTCTCTCTGGGTTTTCC 58.922 50.000 0.00 0.00 36.42 3.13
2136 4783 3.078097 GGAGCTTTCTCTCTGGGTTTTC 58.922 50.000 0.00 0.00 39.31 2.29
2137 4784 2.224892 GGGAGCTTTCTCTCTGGGTTTT 60.225 50.000 0.00 0.00 36.86 2.43
2138 4785 1.352687 GGGAGCTTTCTCTCTGGGTTT 59.647 52.381 0.00 0.00 36.86 3.27
2139 4786 0.988063 GGGAGCTTTCTCTCTGGGTT 59.012 55.000 0.00 0.00 36.86 4.11
2140 4787 0.178891 TGGGAGCTTTCTCTCTGGGT 60.179 55.000 0.00 0.00 40.54 4.51
2141 4788 0.987294 TTGGGAGCTTTCTCTCTGGG 59.013 55.000 0.00 0.00 40.54 4.45
2142 4789 2.867109 TTTGGGAGCTTTCTCTCTGG 57.133 50.000 0.00 0.00 40.54 3.86
2143 4790 6.824305 TTATTTTTGGGAGCTTTCTCTCTG 57.176 37.500 0.00 0.00 40.54 3.35
2144 4791 8.427902 AAATTATTTTTGGGAGCTTTCTCTCT 57.572 30.769 0.00 0.00 40.54 3.10
2147 4794 9.317936 CCATAAATTATTTTTGGGAGCTTTCTC 57.682 33.333 16.08 0.00 38.62 2.87
2148 4795 9.045745 TCCATAAATTATTTTTGGGAGCTTTCT 57.954 29.630 21.11 0.00 0.00 2.52
2149 4796 9.836864 ATCCATAAATTATTTTTGGGAGCTTTC 57.163 29.630 21.11 0.00 32.61 2.62
2165 4812 9.316594 TCCATGAATGCTCATAATCCATAAATT 57.683 29.630 0.00 0.00 40.49 1.82
2166 4813 8.888836 TCCATGAATGCTCATAATCCATAAAT 57.111 30.769 0.00 0.00 40.49 1.40
2167 4814 8.709272 TTCCATGAATGCTCATAATCCATAAA 57.291 30.769 0.00 0.00 40.49 1.40
2168 4815 8.165397 TCTTCCATGAATGCTCATAATCCATAA 58.835 33.333 0.00 0.00 40.49 1.90
2169 4816 7.692172 TCTTCCATGAATGCTCATAATCCATA 58.308 34.615 0.00 0.00 40.49 2.74
2170 4817 6.549242 TCTTCCATGAATGCTCATAATCCAT 58.451 36.000 0.00 0.00 40.49 3.41
2171 4818 5.944135 TCTTCCATGAATGCTCATAATCCA 58.056 37.500 0.00 0.00 40.49 3.41
2172 4819 6.657966 TGATCTTCCATGAATGCTCATAATCC 59.342 38.462 0.00 0.00 40.49 3.01
2173 4820 7.683437 TGATCTTCCATGAATGCTCATAATC 57.317 36.000 0.00 0.00 40.49 1.75
2174 4821 8.523658 CAATGATCTTCCATGAATGCTCATAAT 58.476 33.333 0.00 0.00 40.49 1.28
2175 4822 7.504574 ACAATGATCTTCCATGAATGCTCATAA 59.495 33.333 0.00 0.00 40.49 1.90
2176 4823 7.002276 ACAATGATCTTCCATGAATGCTCATA 58.998 34.615 0.00 0.00 40.49 2.15
2177 4824 5.833667 ACAATGATCTTCCATGAATGCTCAT 59.166 36.000 0.00 0.00 43.40 2.90
2178 4825 5.198207 ACAATGATCTTCCATGAATGCTCA 58.802 37.500 0.00 0.00 35.56 4.26
2179 4826 5.769484 ACAATGATCTTCCATGAATGCTC 57.231 39.130 0.00 0.00 0.00 4.26
2180 4827 7.392673 GGTATACAATGATCTTCCATGAATGCT 59.607 37.037 5.01 0.00 0.00 3.79
2181 4828 7.362401 GGGTATACAATGATCTTCCATGAATGC 60.362 40.741 5.01 0.00 0.00 3.56
2182 4829 7.886970 AGGGTATACAATGATCTTCCATGAATG 59.113 37.037 5.01 0.00 0.00 2.67
2183 4830 7.993416 AGGGTATACAATGATCTTCCATGAAT 58.007 34.615 5.01 0.00 0.00 2.57
2184 4831 7.392766 AGGGTATACAATGATCTTCCATGAA 57.607 36.000 5.01 0.00 0.00 2.57
2185 4832 7.392766 AAGGGTATACAATGATCTTCCATGA 57.607 36.000 5.01 0.00 0.00 3.07
2186 4833 8.355169 CAAAAGGGTATACAATGATCTTCCATG 58.645 37.037 5.01 0.00 0.00 3.66
2187 4834 7.014615 GCAAAAGGGTATACAATGATCTTCCAT 59.985 37.037 5.01 0.00 0.00 3.41
2188 4835 6.321181 GCAAAAGGGTATACAATGATCTTCCA 59.679 38.462 5.01 0.00 0.00 3.53
2189 4836 6.321181 TGCAAAAGGGTATACAATGATCTTCC 59.679 38.462 5.01 0.00 0.00 3.46
2190 4837 7.333528 TGCAAAAGGGTATACAATGATCTTC 57.666 36.000 5.01 0.00 0.00 2.87
2191 4838 7.560991 TGATGCAAAAGGGTATACAATGATCTT 59.439 33.333 5.01 0.00 0.00 2.40
2192 4839 7.062322 TGATGCAAAAGGGTATACAATGATCT 58.938 34.615 5.01 0.00 0.00 2.75
2193 4840 7.275888 TGATGCAAAAGGGTATACAATGATC 57.724 36.000 5.01 0.00 0.00 2.92
2194 4841 7.658525 TTGATGCAAAAGGGTATACAATGAT 57.341 32.000 5.01 0.00 0.00 2.45
2195 4842 7.658525 ATTGATGCAAAAGGGTATACAATGA 57.341 32.000 5.01 0.00 0.00 2.57
2203 4850 9.420118 AGTTCAATATATTGATGCAAAAGGGTA 57.580 29.630 25.05 6.50 45.30 3.69
2204 4851 8.310122 AGTTCAATATATTGATGCAAAAGGGT 57.690 30.769 25.05 5.19 45.30 4.34
2205 4852 9.252962 GAAGTTCAATATATTGATGCAAAAGGG 57.747 33.333 25.05 0.00 45.30 3.95
2221 4868 9.802039 ACATAGGGTAACAAAAGAAGTTCAATA 57.198 29.630 5.50 0.00 39.74 1.90
2222 4869 8.706322 ACATAGGGTAACAAAAGAAGTTCAAT 57.294 30.769 5.50 0.00 39.74 2.57
2223 4870 8.528044 AACATAGGGTAACAAAAGAAGTTCAA 57.472 30.769 5.50 0.00 39.74 2.69
2224 4871 7.229907 GGAACATAGGGTAACAAAAGAAGTTCA 59.770 37.037 5.50 0.00 33.96 3.18
2225 4872 7.309012 GGGAACATAGGGTAACAAAAGAAGTTC 60.309 40.741 0.00 0.00 39.74 3.01
2226 4873 6.492429 GGGAACATAGGGTAACAAAAGAAGTT 59.508 38.462 0.00 0.00 39.74 2.66
2227 4874 6.008331 GGGAACATAGGGTAACAAAAGAAGT 58.992 40.000 0.00 0.00 39.74 3.01
2228 4875 5.123344 CGGGAACATAGGGTAACAAAAGAAG 59.877 44.000 0.00 0.00 39.74 2.85
2229 4876 5.005094 CGGGAACATAGGGTAACAAAAGAA 58.995 41.667 0.00 0.00 39.74 2.52
2230 4877 4.041938 ACGGGAACATAGGGTAACAAAAGA 59.958 41.667 0.00 0.00 39.74 2.52
2231 4878 4.329392 ACGGGAACATAGGGTAACAAAAG 58.671 43.478 0.00 0.00 39.74 2.27
2232 4879 4.202440 TGACGGGAACATAGGGTAACAAAA 60.202 41.667 0.00 0.00 39.74 2.44
2233 4880 3.327172 TGACGGGAACATAGGGTAACAAA 59.673 43.478 0.00 0.00 39.74 2.83
2234 4881 2.905085 TGACGGGAACATAGGGTAACAA 59.095 45.455 0.00 0.00 39.74 2.83
2235 4882 2.234414 GTGACGGGAACATAGGGTAACA 59.766 50.000 0.00 0.00 39.74 2.41
2236 4883 2.419159 GGTGACGGGAACATAGGGTAAC 60.419 54.545 0.00 0.00 0.00 2.50
2237 4884 1.832998 GGTGACGGGAACATAGGGTAA 59.167 52.381 0.00 0.00 0.00 2.85
2238 4885 1.273154 TGGTGACGGGAACATAGGGTA 60.273 52.381 0.00 0.00 0.00 3.69
2239 4886 0.545787 TGGTGACGGGAACATAGGGT 60.546 55.000 0.00 0.00 0.00 4.34
2240 4887 0.616371 TTGGTGACGGGAACATAGGG 59.384 55.000 0.00 0.00 0.00 3.53
2241 4888 2.483014 TTTGGTGACGGGAACATAGG 57.517 50.000 0.00 0.00 0.00 2.57
2242 4889 5.065988 CCTTAATTTGGTGACGGGAACATAG 59.934 44.000 0.00 0.00 0.00 2.23
2243 4890 4.944930 CCTTAATTTGGTGACGGGAACATA 59.055 41.667 0.00 0.00 0.00 2.29
2244 4891 3.761752 CCTTAATTTGGTGACGGGAACAT 59.238 43.478 0.00 0.00 0.00 2.71
2245 4892 3.150767 CCTTAATTTGGTGACGGGAACA 58.849 45.455 0.00 0.00 0.00 3.18
2246 4893 2.490509 CCCTTAATTTGGTGACGGGAAC 59.509 50.000 0.00 0.00 31.85 3.62
2247 4894 2.108601 ACCCTTAATTTGGTGACGGGAA 59.891 45.455 0.00 0.00 32.36 3.97
2248 4895 1.706305 ACCCTTAATTTGGTGACGGGA 59.294 47.619 0.00 0.00 32.36 5.14
2249 4896 2.209690 ACCCTTAATTTGGTGACGGG 57.790 50.000 0.00 0.00 32.36 5.28
2250 4897 4.594123 AAAACCCTTAATTTGGTGACGG 57.406 40.909 0.00 0.00 34.34 4.79
2251 4898 5.838529 AGAAAAACCCTTAATTTGGTGACG 58.161 37.500 0.00 0.00 34.34 4.35
2252 4899 8.581578 TGATAGAAAAACCCTTAATTTGGTGAC 58.418 33.333 0.00 0.00 34.34 3.67
2253 4900 8.713708 TGATAGAAAAACCCTTAATTTGGTGA 57.286 30.769 0.00 0.00 34.34 4.02
2254 4901 9.942850 ATTGATAGAAAAACCCTTAATTTGGTG 57.057 29.630 0.00 0.00 34.34 4.17
2255 4902 9.942850 CATTGATAGAAAAACCCTTAATTTGGT 57.057 29.630 0.00 0.00 36.06 3.67
2256 4903 9.942850 ACATTGATAGAAAAACCCTTAATTTGG 57.057 29.630 0.00 0.00 0.00 3.28
2261 4908 8.301002 CGGAAACATTGATAGAAAAACCCTTAA 58.699 33.333 0.00 0.00 0.00 1.85
2262 4909 7.576098 GCGGAAACATTGATAGAAAAACCCTTA 60.576 37.037 0.00 0.00 0.00 2.69
2263 4910 6.687604 CGGAAACATTGATAGAAAAACCCTT 58.312 36.000 0.00 0.00 0.00 3.95
2264 4911 5.336451 GCGGAAACATTGATAGAAAAACCCT 60.336 40.000 0.00 0.00 0.00 4.34
2265 4912 4.862574 GCGGAAACATTGATAGAAAAACCC 59.137 41.667 0.00 0.00 0.00 4.11
2266 4913 5.465935 TGCGGAAACATTGATAGAAAAACC 58.534 37.500 0.00 0.00 0.00 3.27
2267 4914 8.856490 ATATGCGGAAACATTGATAGAAAAAC 57.144 30.769 0.00 0.00 0.00 2.43
2268 4915 9.868277 AAATATGCGGAAACATTGATAGAAAAA 57.132 25.926 0.00 0.00 0.00 1.94
2269 4916 9.868277 AAAATATGCGGAAACATTGATAGAAAA 57.132 25.926 0.00 0.00 0.00 2.29
2270 4917 9.868277 AAAAATATGCGGAAACATTGATAGAAA 57.132 25.926 0.00 0.00 0.00 2.52
2271 4918 9.299963 CAAAAATATGCGGAAACATTGATAGAA 57.700 29.630 0.00 0.00 0.00 2.10
2272 4919 8.681806 TCAAAAATATGCGGAAACATTGATAGA 58.318 29.630 0.00 0.00 0.00 1.98
2273 4920 8.854979 TCAAAAATATGCGGAAACATTGATAG 57.145 30.769 0.00 0.00 0.00 2.08
2275 4922 9.985730 ATATCAAAAATATGCGGAAACATTGAT 57.014 25.926 11.07 11.07 31.10 2.57
2302 4949 9.471702 CCTTAAGATATGGGAATGCTTGAATAT 57.528 33.333 3.36 0.00 0.00 1.28
2303 4950 7.394359 GCCTTAAGATATGGGAATGCTTGAATA 59.606 37.037 3.36 0.00 0.00 1.75
2304 4951 6.210185 GCCTTAAGATATGGGAATGCTTGAAT 59.790 38.462 3.36 0.00 0.00 2.57
2305 4952 5.536161 GCCTTAAGATATGGGAATGCTTGAA 59.464 40.000 3.36 0.00 0.00 2.69
2306 4953 5.072741 GCCTTAAGATATGGGAATGCTTGA 58.927 41.667 3.36 0.00 0.00 3.02
2307 4954 4.828939 TGCCTTAAGATATGGGAATGCTTG 59.171 41.667 3.36 0.00 0.00 4.01
2308 4955 5.065613 TGCCTTAAGATATGGGAATGCTT 57.934 39.130 3.36 0.00 0.00 3.91
2309 4956 4.729552 TGCCTTAAGATATGGGAATGCT 57.270 40.909 3.36 0.00 0.00 3.79
2310 4957 4.584325 TGTTGCCTTAAGATATGGGAATGC 59.416 41.667 3.36 0.00 36.13 3.56
2311 4958 6.713762 TTGTTGCCTTAAGATATGGGAATG 57.286 37.500 3.36 0.00 36.13 2.67
2312 4959 7.015584 GGAATTGTTGCCTTAAGATATGGGAAT 59.984 37.037 3.36 0.00 36.13 3.01
2313 4960 6.323739 GGAATTGTTGCCTTAAGATATGGGAA 59.676 38.462 3.36 0.00 32.29 3.97
2314 4961 5.833131 GGAATTGTTGCCTTAAGATATGGGA 59.167 40.000 3.36 0.00 0.00 4.37
2315 4962 5.011023 GGGAATTGTTGCCTTAAGATATGGG 59.989 44.000 3.36 0.00 38.27 4.00
2316 4963 5.011023 GGGGAATTGTTGCCTTAAGATATGG 59.989 44.000 3.36 0.00 41.52 2.74
2317 4964 5.598005 TGGGGAATTGTTGCCTTAAGATATG 59.402 40.000 3.36 0.00 41.52 1.78
2318 4965 5.776358 TGGGGAATTGTTGCCTTAAGATAT 58.224 37.500 3.36 0.00 41.52 1.63
2319 4966 5.199982 TGGGGAATTGTTGCCTTAAGATA 57.800 39.130 3.36 0.00 41.52 1.98
2320 4967 4.059773 TGGGGAATTGTTGCCTTAAGAT 57.940 40.909 3.36 0.00 41.52 2.40
2321 4968 3.534357 TGGGGAATTGTTGCCTTAAGA 57.466 42.857 3.36 0.00 41.52 2.10
2322 4969 4.222588 TCAATGGGGAATTGTTGCCTTAAG 59.777 41.667 0.00 0.00 45.14 1.85
2323 4970 4.020662 GTCAATGGGGAATTGTTGCCTTAA 60.021 41.667 0.30 0.00 45.14 1.85
2324 4971 3.513515 GTCAATGGGGAATTGTTGCCTTA 59.486 43.478 0.30 0.00 45.14 2.69
2325 4972 2.302733 GTCAATGGGGAATTGTTGCCTT 59.697 45.455 0.30 0.00 45.14 4.35
2326 4973 1.901833 GTCAATGGGGAATTGTTGCCT 59.098 47.619 0.30 0.00 45.14 4.75
2327 4974 1.066215 GGTCAATGGGGAATTGTTGCC 60.066 52.381 0.00 0.00 45.14 4.52
2328 4975 1.066215 GGGTCAATGGGGAATTGTTGC 60.066 52.381 0.00 0.00 45.14 4.17
2329 4976 2.234414 CAGGGTCAATGGGGAATTGTTG 59.766 50.000 0.00 0.00 45.14 3.33
2330 4977 2.111613 TCAGGGTCAATGGGGAATTGTT 59.888 45.455 0.00 0.00 45.14 2.83
2331 4978 1.715931 TCAGGGTCAATGGGGAATTGT 59.284 47.619 0.00 0.00 45.14 2.71
2332 4979 2.530460 TCAGGGTCAATGGGGAATTG 57.470 50.000 0.00 0.00 46.10 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.