Multiple sequence alignment - TraesCS2A01G443500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G443500 chr2A 100.000 2966 0 0 1 2966 693420775 693423740 0.000000e+00 5478.0
1 TraesCS2A01G443500 chr2A 92.780 277 19 1 2600 2875 419484133 419483857 1.660000e-107 399.0
2 TraesCS2A01G443500 chr2B 97.424 2174 52 4 700 2872 658990590 658992760 0.000000e+00 3701.0
3 TraesCS2A01G443500 chr2B 92.416 567 28 5 1610 2175 658997258 658997810 0.000000e+00 795.0
4 TraesCS2A01G443500 chr2B 75.514 1168 232 41 741 1875 658939541 658940687 9.420000e-145 523.0
5 TraesCS2A01G443500 chr2B 87.622 307 20 6 2295 2598 658998084 658998375 1.020000e-89 340.0
6 TraesCS2A01G443500 chr2B 79.524 420 78 7 724 1141 658874633 658875046 2.890000e-75 292.0
7 TraesCS2A01G443500 chr2B 92.727 165 10 2 2802 2966 658992634 658992796 1.370000e-58 237.0
8 TraesCS2A01G443500 chr2B 96.875 32 1 0 2250 2281 658998054 658998085 1.000000e-03 54.7
9 TraesCS2A01G443500 chr4A 93.838 357 19 3 2 358 433308926 433309279 4.350000e-148 534.0
10 TraesCS2A01G443500 chr5A 93.502 277 18 0 2599 2875 328540527 328540803 2.130000e-111 412.0
11 TraesCS2A01G443500 chr4D 92.908 282 18 2 2595 2875 483157018 483157298 2.750000e-110 409.0
12 TraesCS2A01G443500 chr4D 92.908 282 18 2 2595 2875 483164814 483165094 2.750000e-110 409.0
13 TraesCS2A01G443500 chr6A 93.165 278 18 1 2599 2875 26629976 26630253 9.900000e-110 407.0
14 TraesCS2A01G443500 chr6D 92.226 283 19 3 2595 2875 379093458 379093177 5.960000e-107 398.0
15 TraesCS2A01G443500 chr3D 92.171 281 20 2 2596 2875 460502835 460502556 2.140000e-106 396.0
16 TraesCS2A01G443500 chr3A 92.171 281 21 1 2596 2875 660861851 660861571 2.140000e-106 396.0
17 TraesCS2A01G443500 chr1B 92.446 278 19 2 2596 2872 358031228 358031504 2.140000e-106 396.0
18 TraesCS2A01G443500 chr7D 89.286 308 29 4 2568 2872 602844149 602844455 1.670000e-102 383.0
19 TraesCS2A01G443500 chr7D 92.121 165 11 2 2802 2966 151540221 151540383 6.390000e-57 231.0
20 TraesCS2A01G443500 chr7D 91.975 162 11 2 2805 2966 603599189 603599030 2.970000e-55 226.0
21 TraesCS2A01G443500 chr5D 89.137 313 25 8 2569 2875 92398904 92398595 6.000000e-102 381.0
22 TraesCS2A01G443500 chr5D 91.975 162 11 2 2805 2966 404194635 404194476 2.970000e-55 226.0
23 TraesCS2A01G443500 chr5D 81.743 241 32 9 74 305 135661072 135660835 1.090000e-44 191.0
24 TraesCS2A01G443500 chr7A 93.252 163 7 4 2805 2966 570120743 570120584 1.370000e-58 237.0
25 TraesCS2A01G443500 chr7A 96.703 91 3 0 387 477 544264783 544264873 5.120000e-33 152.0
26 TraesCS2A01G443500 chr7A 93.814 97 5 1 387 482 404501921 404501825 8.570000e-31 145.0
27 TraesCS2A01G443500 chr1D 92.593 162 10 2 2805 2966 426586208 426586049 6.390000e-57 231.0
28 TraesCS2A01G443500 chr1D 91.515 165 12 2 2802 2966 492432738 492432900 2.970000e-55 226.0
29 TraesCS2A01G443500 chr2D 91.975 162 11 2 2805 2966 484919995 484919836 2.970000e-55 226.0
30 TraesCS2A01G443500 chr2D 91.515 165 12 2 2802 2966 559833112 559833274 2.970000e-55 226.0
31 TraesCS2A01G443500 chr3B 78.543 247 33 13 74 305 642461500 642461741 8.570000e-31 145.0
32 TraesCS2A01G443500 chr3B 76.518 247 39 13 74 305 507295592 507295834 1.870000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G443500 chr2A 693420775 693423740 2965 False 5478.000000 5478 100.000000 1 2966 1 chr2A.!!$F1 2965
1 TraesCS2A01G443500 chr2B 658990590 658992796 2206 False 1969.000000 3701 95.075500 700 2966 2 chr2B.!!$F3 2266
2 TraesCS2A01G443500 chr2B 658939541 658940687 1146 False 523.000000 523 75.514000 741 1875 1 chr2B.!!$F2 1134
3 TraesCS2A01G443500 chr2B 658997258 658998375 1117 False 396.566667 795 92.304333 1610 2598 3 chr2B.!!$F4 988

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
635 636 0.035458 CATTATCTCCAGACCCGGCC 59.965 60.0 0.0 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2844 3039 1.135689 CGAACTGCTAAATGCCCACAC 60.136 52.381 0.0 0.0 42.0 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 8.555896 TTATGGAAAACCCCTTTTCTTTTAGT 57.444 30.769 6.02 0.00 43.39 2.24
49 50 6.877668 TGGAAAACCCCTTTTCTTTTAGTT 57.122 33.333 6.02 0.00 43.39 2.24
50 51 7.260387 TGGAAAACCCCTTTTCTTTTAGTTT 57.740 32.000 6.02 0.00 43.39 2.66
51 52 7.691213 TGGAAAACCCCTTTTCTTTTAGTTTT 58.309 30.769 0.00 0.00 43.39 2.43
52 53 8.164733 TGGAAAACCCCTTTTCTTTTAGTTTTT 58.835 29.630 6.02 0.00 43.39 1.94
53 54 8.671028 GGAAAACCCCTTTTCTTTTAGTTTTTC 58.329 33.333 6.02 0.00 43.39 2.29
54 55 9.221933 GAAAACCCCTTTTCTTTTAGTTTTTCA 57.778 29.630 0.00 0.00 41.46 2.69
55 56 9.747898 AAAACCCCTTTTCTTTTAGTTTTTCAT 57.252 25.926 0.00 0.00 33.47 2.57
56 57 9.747898 AAACCCCTTTTCTTTTAGTTTTTCATT 57.252 25.926 0.00 0.00 0.00 2.57
57 58 9.747898 AACCCCTTTTCTTTTAGTTTTTCATTT 57.252 25.926 0.00 0.00 0.00 2.32
63 64 8.896320 TTTCTTTTAGTTTTTCATTTAGGGGC 57.104 30.769 0.00 0.00 0.00 5.80
64 65 7.604657 TCTTTTAGTTTTTCATTTAGGGGCA 57.395 32.000 0.00 0.00 0.00 5.36
65 66 7.666623 TCTTTTAGTTTTTCATTTAGGGGCAG 58.333 34.615 0.00 0.00 0.00 4.85
66 67 6.987403 TTTAGTTTTTCATTTAGGGGCAGT 57.013 33.333 0.00 0.00 0.00 4.40
67 68 8.480133 TTTTAGTTTTTCATTTAGGGGCAGTA 57.520 30.769 0.00 0.00 0.00 2.74
68 69 8.658840 TTTAGTTTTTCATTTAGGGGCAGTAT 57.341 30.769 0.00 0.00 0.00 2.12
69 70 9.756571 TTTAGTTTTTCATTTAGGGGCAGTATA 57.243 29.630 0.00 0.00 0.00 1.47
70 71 7.881775 AGTTTTTCATTTAGGGGCAGTATAG 57.118 36.000 0.00 0.00 0.00 1.31
71 72 7.639378 AGTTTTTCATTTAGGGGCAGTATAGA 58.361 34.615 0.00 0.00 0.00 1.98
72 73 8.282256 AGTTTTTCATTTAGGGGCAGTATAGAT 58.718 33.333 0.00 0.00 0.00 1.98
73 74 8.914011 GTTTTTCATTTAGGGGCAGTATAGATT 58.086 33.333 0.00 0.00 0.00 2.40
75 76 9.793259 TTTTCATTTAGGGGCAGTATAGATTAG 57.207 33.333 0.00 0.00 0.00 1.73
76 77 8.506196 TTCATTTAGGGGCAGTATAGATTAGT 57.494 34.615 0.00 0.00 0.00 2.24
77 78 9.610104 TTCATTTAGGGGCAGTATAGATTAGTA 57.390 33.333 0.00 0.00 0.00 1.82
78 79 9.610104 TCATTTAGGGGCAGTATAGATTAGTAA 57.390 33.333 0.00 0.00 0.00 2.24
82 83 6.712276 AGGGGCAGTATAGATTAGTAAATGC 58.288 40.000 0.00 0.00 0.00 3.56
86 87 8.705048 GGCAGTATAGATTAGTAAATGCCTAC 57.295 38.462 4.96 0.00 45.60 3.18
87 88 8.311836 GGCAGTATAGATTAGTAAATGCCTACA 58.688 37.037 4.96 0.00 45.60 2.74
88 89 9.877178 GCAGTATAGATTAGTAAATGCCTACAT 57.123 33.333 0.00 0.00 38.49 2.29
90 91 9.877178 AGTATAGATTAGTAAATGCCTACATGC 57.123 33.333 0.00 0.00 36.36 4.06
91 92 9.653287 GTATAGATTAGTAAATGCCTACATGCA 57.347 33.333 0.00 0.00 46.94 3.96
93 94 9.745018 ATAGATTAGTAAATGCCTACATGCAAT 57.255 29.630 0.00 0.00 45.84 3.56
109 110 6.916401 CATGCAATGCACGTTAATATTAGG 57.084 37.500 11.23 0.00 43.04 2.69
110 111 6.437928 CATGCAATGCACGTTAATATTAGGT 58.562 36.000 11.23 0.00 43.04 3.08
111 112 7.580600 CATGCAATGCACGTTAATATTAGGTA 58.419 34.615 11.23 0.00 43.04 3.08
112 113 7.184800 TGCAATGCACGTTAATATTAGGTAG 57.815 36.000 2.72 0.00 31.71 3.18
113 114 6.764085 TGCAATGCACGTTAATATTAGGTAGT 59.236 34.615 2.72 0.00 31.71 2.73
114 115 7.927092 TGCAATGCACGTTAATATTAGGTAGTA 59.073 33.333 2.72 0.00 31.71 1.82
115 116 8.932791 GCAATGCACGTTAATATTAGGTAGTAT 58.067 33.333 0.00 0.00 0.00 2.12
145 146 9.777297 AACTGCATGTGTATATTATGTGTATGA 57.223 29.630 0.00 0.00 0.00 2.15
146 147 9.948964 ACTGCATGTGTATATTATGTGTATGAT 57.051 29.630 0.00 0.00 0.00 2.45
182 183 9.730420 GTGTTAATTATGTTATTAGTGCTTGGG 57.270 33.333 0.00 0.00 0.00 4.12
183 184 9.688091 TGTTAATTATGTTATTAGTGCTTGGGA 57.312 29.630 0.00 0.00 0.00 4.37
186 187 8.995027 AATTATGTTATTAGTGCTTGGGATGA 57.005 30.769 0.00 0.00 0.00 2.92
187 188 9.592196 AATTATGTTATTAGTGCTTGGGATGAT 57.408 29.630 0.00 0.00 0.00 2.45
188 189 6.889301 ATGTTATTAGTGCTTGGGATGATG 57.111 37.500 0.00 0.00 0.00 3.07
189 190 5.754782 TGTTATTAGTGCTTGGGATGATGT 58.245 37.500 0.00 0.00 0.00 3.06
190 191 6.186957 TGTTATTAGTGCTTGGGATGATGTT 58.813 36.000 0.00 0.00 0.00 2.71
191 192 7.342581 TGTTATTAGTGCTTGGGATGATGTTA 58.657 34.615 0.00 0.00 0.00 2.41
192 193 7.998383 TGTTATTAGTGCTTGGGATGATGTTAT 59.002 33.333 0.00 0.00 0.00 1.89
193 194 8.850156 GTTATTAGTGCTTGGGATGATGTTATT 58.150 33.333 0.00 0.00 0.00 1.40
194 195 6.698008 TTAGTGCTTGGGATGATGTTATTG 57.302 37.500 0.00 0.00 0.00 1.90
195 196 3.382546 AGTGCTTGGGATGATGTTATTGC 59.617 43.478 0.00 0.00 0.00 3.56
196 197 3.130869 GTGCTTGGGATGATGTTATTGCA 59.869 43.478 0.00 0.00 0.00 4.08
197 198 3.962063 TGCTTGGGATGATGTTATTGCAT 59.038 39.130 0.00 0.00 0.00 3.96
198 199 4.202172 TGCTTGGGATGATGTTATTGCATG 60.202 41.667 0.00 0.00 0.00 4.06
199 200 4.304110 CTTGGGATGATGTTATTGCATGC 58.696 43.478 11.82 11.82 0.00 4.06
200 201 3.568443 TGGGATGATGTTATTGCATGCT 58.432 40.909 20.33 1.26 31.98 3.79
201 202 4.727677 TGGGATGATGTTATTGCATGCTA 58.272 39.130 20.33 12.49 31.98 3.49
202 203 5.139001 TGGGATGATGTTATTGCATGCTAA 58.861 37.500 20.33 11.86 31.98 3.09
203 204 5.597594 TGGGATGATGTTATTGCATGCTAAA 59.402 36.000 20.33 6.03 31.98 1.85
204 205 5.922544 GGGATGATGTTATTGCATGCTAAAC 59.077 40.000 20.33 18.76 31.98 2.01
205 206 6.461370 GGGATGATGTTATTGCATGCTAAACA 60.461 38.462 24.80 24.80 34.81 2.83
206 207 6.418819 GGATGATGTTATTGCATGCTAAACAC 59.581 38.462 24.98 20.08 33.27 3.32
207 208 5.331098 TGATGTTATTGCATGCTAAACACG 58.669 37.500 24.98 0.00 33.27 4.49
208 209 4.757799 TGTTATTGCATGCTAAACACGT 57.242 36.364 20.33 0.00 0.00 4.49
209 210 5.114785 TGTTATTGCATGCTAAACACGTT 57.885 34.783 20.33 0.00 0.00 3.99
210 211 4.914504 TGTTATTGCATGCTAAACACGTTG 59.085 37.500 20.33 0.00 0.00 4.10
211 212 3.913548 ATTGCATGCTAAACACGTTGA 57.086 38.095 20.33 0.00 0.00 3.18
212 213 2.967459 TGCATGCTAAACACGTTGAG 57.033 45.000 20.33 0.00 0.00 3.02
213 214 1.069296 TGCATGCTAAACACGTTGAGC 60.069 47.619 20.33 11.72 45.32 4.26
215 216 4.417240 GCTAAACACGTTGAGCGC 57.583 55.556 0.00 0.00 46.11 5.92
216 217 1.860078 GCTAAACACGTTGAGCGCT 59.140 52.632 11.27 11.27 46.11 5.92
217 218 0.179248 GCTAAACACGTTGAGCGCTC 60.179 55.000 30.42 30.42 46.11 5.03
218 219 0.091344 CTAAACACGTTGAGCGCTCG 59.909 55.000 30.75 22.63 46.11 5.03
219 220 1.882682 TAAACACGTTGAGCGCTCGC 61.883 55.000 30.75 23.94 46.11 5.03
224 225 4.430423 GTTGAGCGCTCGCCGTTG 62.430 66.667 30.75 0.00 43.17 4.10
225 226 4.656117 TTGAGCGCTCGCCGTTGA 62.656 61.111 30.75 10.15 43.17 3.18
226 227 4.656117 TGAGCGCTCGCCGTTGAA 62.656 61.111 30.75 9.36 43.17 2.69
227 228 3.843240 GAGCGCTCGCCGTTGAAG 61.843 66.667 23.61 0.00 43.17 3.02
230 231 4.139420 CGCTCGCCGTTGAAGCAG 62.139 66.667 0.00 0.00 0.00 4.24
231 232 3.044305 GCTCGCCGTTGAAGCAGT 61.044 61.111 0.00 0.00 0.00 4.40
232 233 3.016474 GCTCGCCGTTGAAGCAGTC 62.016 63.158 0.00 0.00 0.00 3.51
233 234 1.664649 CTCGCCGTTGAAGCAGTCA 60.665 57.895 0.00 0.00 0.00 3.41
234 235 1.221466 CTCGCCGTTGAAGCAGTCAA 61.221 55.000 0.00 0.00 44.20 3.18
243 244 2.416747 TGAAGCAGTCAAGATCGTTGG 58.583 47.619 5.45 0.00 31.51 3.77
244 245 2.037121 TGAAGCAGTCAAGATCGTTGGA 59.963 45.455 5.45 0.00 31.51 3.53
245 246 3.265791 GAAGCAGTCAAGATCGTTGGAT 58.734 45.455 5.45 0.00 34.96 3.41
246 247 3.340814 AGCAGTCAAGATCGTTGGATT 57.659 42.857 5.45 0.00 31.51 3.01
247 248 3.005554 AGCAGTCAAGATCGTTGGATTG 58.994 45.455 5.45 2.55 31.51 2.67
248 249 3.002791 GCAGTCAAGATCGTTGGATTGA 58.997 45.455 5.45 0.00 31.51 2.57
249 250 3.181516 GCAGTCAAGATCGTTGGATTGAC 60.182 47.826 12.85 12.85 39.26 3.18
250 251 3.372206 CAGTCAAGATCGTTGGATTGACC 59.628 47.826 15.71 3.52 39.57 4.02
251 252 3.261897 AGTCAAGATCGTTGGATTGACCT 59.738 43.478 15.71 5.19 39.57 3.85
252 253 3.372206 GTCAAGATCGTTGGATTGACCTG 59.628 47.826 10.61 0.00 35.66 4.00
253 254 2.679837 CAAGATCGTTGGATTGACCTGG 59.320 50.000 0.00 0.00 39.86 4.45
254 255 2.187958 AGATCGTTGGATTGACCTGGA 58.812 47.619 0.00 0.00 39.86 3.86
255 256 2.774234 AGATCGTTGGATTGACCTGGAT 59.226 45.455 0.00 0.00 39.86 3.41
256 257 3.200825 AGATCGTTGGATTGACCTGGATT 59.799 43.478 0.00 0.00 39.86 3.01
257 258 2.710377 TCGTTGGATTGACCTGGATTG 58.290 47.619 0.00 0.00 39.86 2.67
258 259 2.304470 TCGTTGGATTGACCTGGATTGA 59.696 45.455 0.00 0.00 39.86 2.57
259 260 3.054434 TCGTTGGATTGACCTGGATTGAT 60.054 43.478 0.00 0.00 39.86 2.57
260 261 3.065786 CGTTGGATTGACCTGGATTGATG 59.934 47.826 0.00 0.00 39.86 3.07
261 262 3.301794 TGGATTGACCTGGATTGATGG 57.698 47.619 0.00 0.00 39.86 3.51
262 263 2.091720 TGGATTGACCTGGATTGATGGG 60.092 50.000 0.00 0.00 39.86 4.00
263 264 1.959282 GATTGACCTGGATTGATGGGC 59.041 52.381 0.00 0.00 0.00 5.36
264 265 0.394216 TTGACCTGGATTGATGGGCG 60.394 55.000 0.00 0.00 0.00 6.13
265 266 1.224592 GACCTGGATTGATGGGCGT 59.775 57.895 0.00 0.00 0.00 5.68
266 267 1.077501 ACCTGGATTGATGGGCGTG 60.078 57.895 0.00 0.00 0.00 5.34
267 268 1.224315 CCTGGATTGATGGGCGTGA 59.776 57.895 0.00 0.00 0.00 4.35
268 269 0.179009 CCTGGATTGATGGGCGTGAT 60.179 55.000 0.00 0.00 0.00 3.06
269 270 1.233019 CTGGATTGATGGGCGTGATC 58.767 55.000 0.00 0.00 0.00 2.92
270 271 0.545646 TGGATTGATGGGCGTGATCA 59.454 50.000 0.00 0.00 0.00 2.92
271 272 1.233019 GGATTGATGGGCGTGATCAG 58.767 55.000 0.00 0.00 31.52 2.90
272 273 1.475751 GGATTGATGGGCGTGATCAGT 60.476 52.381 0.00 0.00 31.52 3.41
273 274 2.292267 GATTGATGGGCGTGATCAGTT 58.708 47.619 0.00 0.00 31.52 3.16
274 275 3.466836 GATTGATGGGCGTGATCAGTTA 58.533 45.455 0.00 0.00 31.52 2.24
275 276 2.602257 TGATGGGCGTGATCAGTTAG 57.398 50.000 0.00 0.00 0.00 2.34
276 277 2.107366 TGATGGGCGTGATCAGTTAGA 58.893 47.619 0.00 0.00 0.00 2.10
277 278 2.700371 TGATGGGCGTGATCAGTTAGAT 59.300 45.455 0.00 0.00 40.48 1.98
287 288 3.853355 ATCAGTTAGATCTGCCCCTTG 57.147 47.619 5.18 0.00 35.63 3.61
288 289 1.839994 TCAGTTAGATCTGCCCCTTGG 59.160 52.381 5.18 0.00 35.63 3.61
289 290 4.780907 ATCAGTTAGATCTGCCCCTTGGG 61.781 52.174 5.18 0.00 38.09 4.12
290 291 0.919710 GTTAGATCTGCCCCTTGGGT 59.080 55.000 5.18 0.00 46.51 4.51
291 292 1.134068 GTTAGATCTGCCCCTTGGGTC 60.134 57.143 5.18 0.00 46.51 4.46
292 293 0.343372 TAGATCTGCCCCTTGGGTCT 59.657 55.000 5.18 3.28 46.51 3.85
293 294 0.551131 AGATCTGCCCCTTGGGTCTT 60.551 55.000 4.84 0.00 46.51 3.01
294 295 0.332972 GATCTGCCCCTTGGGTCTTT 59.667 55.000 4.84 0.00 46.51 2.52
295 296 0.786435 ATCTGCCCCTTGGGTCTTTT 59.214 50.000 4.84 0.00 46.51 2.27
296 297 0.560688 TCTGCCCCTTGGGTCTTTTT 59.439 50.000 4.84 0.00 46.51 1.94
297 298 0.681175 CTGCCCCTTGGGTCTTTTTG 59.319 55.000 4.84 0.00 46.51 2.44
298 299 0.263172 TGCCCCTTGGGTCTTTTTGA 59.737 50.000 4.84 0.00 46.51 2.69
299 300 1.132881 TGCCCCTTGGGTCTTTTTGAT 60.133 47.619 4.84 0.00 46.51 2.57
300 301 2.110899 TGCCCCTTGGGTCTTTTTGATA 59.889 45.455 4.84 0.00 46.51 2.15
301 302 3.245948 TGCCCCTTGGGTCTTTTTGATAT 60.246 43.478 4.84 0.00 46.51 1.63
302 303 3.774766 GCCCCTTGGGTCTTTTTGATATT 59.225 43.478 4.84 0.00 46.51 1.28
303 304 4.383010 GCCCCTTGGGTCTTTTTGATATTG 60.383 45.833 4.84 0.00 46.51 1.90
304 305 4.162131 CCCCTTGGGTCTTTTTGATATTGG 59.838 45.833 4.84 0.00 38.25 3.16
305 306 5.022787 CCCTTGGGTCTTTTTGATATTGGA 58.977 41.667 0.00 0.00 0.00 3.53
306 307 5.662657 CCCTTGGGTCTTTTTGATATTGGAT 59.337 40.000 0.00 0.00 0.00 3.41
307 308 6.156775 CCCTTGGGTCTTTTTGATATTGGATT 59.843 38.462 0.00 0.00 0.00 3.01
308 309 7.311234 CCCTTGGGTCTTTTTGATATTGGATTT 60.311 37.037 0.00 0.00 0.00 2.17
309 310 8.102676 CCTTGGGTCTTTTTGATATTGGATTTT 58.897 33.333 0.00 0.00 0.00 1.82
310 311 9.506018 CTTGGGTCTTTTTGATATTGGATTTTT 57.494 29.630 0.00 0.00 0.00 1.94
313 314 9.098355 GGGTCTTTTTGATATTGGATTTTTAGC 57.902 33.333 0.00 0.00 0.00 3.09
314 315 9.651913 GGTCTTTTTGATATTGGATTTTTAGCA 57.348 29.630 0.00 0.00 0.00 3.49
411 412 3.535280 TTTGAACCAGGCTTTTTGACC 57.465 42.857 0.00 0.00 0.00 4.02
412 413 1.408969 TGAACCAGGCTTTTTGACCC 58.591 50.000 0.00 0.00 0.00 4.46
413 414 0.679505 GAACCAGGCTTTTTGACCCC 59.320 55.000 0.00 0.00 0.00 4.95
414 415 0.264657 AACCAGGCTTTTTGACCCCT 59.735 50.000 0.00 0.00 0.00 4.79
415 416 0.264657 ACCAGGCTTTTTGACCCCTT 59.735 50.000 0.00 0.00 0.00 3.95
416 417 1.343985 ACCAGGCTTTTTGACCCCTTT 60.344 47.619 0.00 0.00 0.00 3.11
417 418 1.344438 CCAGGCTTTTTGACCCCTTTC 59.656 52.381 0.00 0.00 0.00 2.62
418 419 1.344438 CAGGCTTTTTGACCCCTTTCC 59.656 52.381 0.00 0.00 0.00 3.13
419 420 1.062505 AGGCTTTTTGACCCCTTTCCA 60.063 47.619 0.00 0.00 0.00 3.53
420 421 1.977854 GGCTTTTTGACCCCTTTCCAT 59.022 47.619 0.00 0.00 0.00 3.41
421 422 2.371841 GGCTTTTTGACCCCTTTCCATT 59.628 45.455 0.00 0.00 0.00 3.16
422 423 3.402110 GCTTTTTGACCCCTTTCCATTG 58.598 45.455 0.00 0.00 0.00 2.82
423 424 3.402110 CTTTTTGACCCCTTTCCATTGC 58.598 45.455 0.00 0.00 0.00 3.56
424 425 2.094100 TTTGACCCCTTTCCATTGCA 57.906 45.000 0.00 0.00 0.00 4.08
425 426 2.323999 TTGACCCCTTTCCATTGCAT 57.676 45.000 0.00 0.00 0.00 3.96
426 427 1.851304 TGACCCCTTTCCATTGCATC 58.149 50.000 0.00 0.00 0.00 3.91
427 428 0.740737 GACCCCTTTCCATTGCATCG 59.259 55.000 0.00 0.00 0.00 3.84
428 429 0.331278 ACCCCTTTCCATTGCATCGA 59.669 50.000 0.00 0.00 0.00 3.59
429 430 1.272425 ACCCCTTTCCATTGCATCGAA 60.272 47.619 0.00 0.00 0.00 3.71
430 431 1.134946 CCCCTTTCCATTGCATCGAAC 59.865 52.381 0.00 0.00 0.00 3.95
431 432 1.202177 CCCTTTCCATTGCATCGAACG 60.202 52.381 0.00 0.00 0.00 3.95
432 433 1.202177 CCTTTCCATTGCATCGAACGG 60.202 52.381 0.00 0.00 0.00 4.44
433 434 1.737236 CTTTCCATTGCATCGAACGGA 59.263 47.619 0.00 0.00 0.00 4.69
434 435 1.814793 TTCCATTGCATCGAACGGAA 58.185 45.000 0.00 0.00 0.00 4.30
435 436 1.814793 TCCATTGCATCGAACGGAAA 58.185 45.000 0.00 0.00 0.00 3.13
436 437 2.364632 TCCATTGCATCGAACGGAAAT 58.635 42.857 0.00 0.00 0.00 2.17
437 438 3.536570 TCCATTGCATCGAACGGAAATA 58.463 40.909 0.00 0.00 0.00 1.40
438 439 3.311322 TCCATTGCATCGAACGGAAATAC 59.689 43.478 0.00 0.00 0.00 1.89
439 440 3.064682 CCATTGCATCGAACGGAAATACA 59.935 43.478 0.00 0.00 0.00 2.29
440 441 4.438065 CCATTGCATCGAACGGAAATACAA 60.438 41.667 0.00 0.00 0.00 2.41
441 442 3.733024 TGCATCGAACGGAAATACAAC 57.267 42.857 0.00 0.00 0.00 3.32
442 443 3.067833 TGCATCGAACGGAAATACAACA 58.932 40.909 0.00 0.00 0.00 3.33
443 444 3.124466 TGCATCGAACGGAAATACAACAG 59.876 43.478 0.00 0.00 0.00 3.16
444 445 3.124636 GCATCGAACGGAAATACAACAGT 59.875 43.478 0.00 0.00 0.00 3.55
445 446 4.724036 GCATCGAACGGAAATACAACAGTC 60.724 45.833 0.00 0.00 0.00 3.51
446 447 3.319755 TCGAACGGAAATACAACAGTCC 58.680 45.455 0.00 0.00 0.00 3.85
447 448 2.414138 CGAACGGAAATACAACAGTCCC 59.586 50.000 0.00 0.00 0.00 4.46
448 449 3.404899 GAACGGAAATACAACAGTCCCA 58.595 45.455 0.00 0.00 0.00 4.37
449 450 3.053831 ACGGAAATACAACAGTCCCAG 57.946 47.619 0.00 0.00 0.00 4.45
450 451 2.635915 ACGGAAATACAACAGTCCCAGA 59.364 45.455 0.00 0.00 0.00 3.86
451 452 3.071892 ACGGAAATACAACAGTCCCAGAA 59.928 43.478 0.00 0.00 0.00 3.02
452 453 4.069304 CGGAAATACAACAGTCCCAGAAA 58.931 43.478 0.00 0.00 0.00 2.52
453 454 4.083484 CGGAAATACAACAGTCCCAGAAAC 60.083 45.833 0.00 0.00 0.00 2.78
454 455 4.825085 GGAAATACAACAGTCCCAGAAACA 59.175 41.667 0.00 0.00 0.00 2.83
455 456 5.476945 GGAAATACAACAGTCCCAGAAACAT 59.523 40.000 0.00 0.00 0.00 2.71
456 457 5.964958 AATACAACAGTCCCAGAAACATG 57.035 39.130 0.00 0.00 0.00 3.21
457 458 3.297134 ACAACAGTCCCAGAAACATGT 57.703 42.857 0.00 0.00 0.00 3.21
458 459 3.631250 ACAACAGTCCCAGAAACATGTT 58.369 40.909 4.92 4.92 0.00 2.71
459 460 3.632145 ACAACAGTCCCAGAAACATGTTC 59.368 43.478 12.39 5.78 0.00 3.18
460 461 3.576078 ACAGTCCCAGAAACATGTTCA 57.424 42.857 12.39 0.00 0.00 3.18
461 462 3.480470 ACAGTCCCAGAAACATGTTCAG 58.520 45.455 12.39 4.80 0.00 3.02
462 463 3.136443 ACAGTCCCAGAAACATGTTCAGA 59.864 43.478 12.39 1.97 0.00 3.27
463 464 4.136796 CAGTCCCAGAAACATGTTCAGAA 58.863 43.478 12.39 0.00 0.00 3.02
464 465 4.214971 CAGTCCCAGAAACATGTTCAGAAG 59.785 45.833 12.39 1.67 0.00 2.85
465 466 3.503748 GTCCCAGAAACATGTTCAGAAGG 59.496 47.826 12.39 9.57 0.00 3.46
466 467 3.394274 TCCCAGAAACATGTTCAGAAGGA 59.606 43.478 12.39 11.69 0.00 3.36
467 468 4.141274 TCCCAGAAACATGTTCAGAAGGAA 60.141 41.667 12.39 0.00 0.00 3.36
468 469 4.584325 CCCAGAAACATGTTCAGAAGGAAA 59.416 41.667 12.39 0.00 37.23 3.13
469 470 5.278660 CCCAGAAACATGTTCAGAAGGAAAG 60.279 44.000 12.39 0.00 37.23 2.62
470 471 5.278660 CCAGAAACATGTTCAGAAGGAAAGG 60.279 44.000 12.39 0.00 37.23 3.11
471 472 5.532406 CAGAAACATGTTCAGAAGGAAAGGA 59.468 40.000 12.39 0.00 37.23 3.36
472 473 6.039717 CAGAAACATGTTCAGAAGGAAAGGAA 59.960 38.462 12.39 0.00 37.23 3.36
473 474 6.607198 AGAAACATGTTCAGAAGGAAAGGAAA 59.393 34.615 12.39 0.00 37.23 3.13
474 475 6.790232 AACATGTTCAGAAGGAAAGGAAAA 57.210 33.333 4.92 0.00 37.23 2.29
475 476 6.396829 ACATGTTCAGAAGGAAAGGAAAAG 57.603 37.500 0.00 0.00 37.23 2.27
476 477 5.302823 ACATGTTCAGAAGGAAAGGAAAAGG 59.697 40.000 0.00 0.00 37.23 3.11
477 478 5.124036 TGTTCAGAAGGAAAGGAAAAGGA 57.876 39.130 0.00 0.00 37.23 3.36
478 479 5.515106 TGTTCAGAAGGAAAGGAAAAGGAA 58.485 37.500 0.00 0.00 37.23 3.36
479 480 5.955355 TGTTCAGAAGGAAAGGAAAAGGAAA 59.045 36.000 0.00 0.00 37.23 3.13
480 481 6.439058 TGTTCAGAAGGAAAGGAAAAGGAAAA 59.561 34.615 0.00 0.00 37.23 2.29
481 482 6.715347 TCAGAAGGAAAGGAAAAGGAAAAG 57.285 37.500 0.00 0.00 0.00 2.27
482 483 6.194967 TCAGAAGGAAAGGAAAAGGAAAAGT 58.805 36.000 0.00 0.00 0.00 2.66
483 484 6.667848 TCAGAAGGAAAGGAAAAGGAAAAGTT 59.332 34.615 0.00 0.00 0.00 2.66
484 485 7.180229 TCAGAAGGAAAGGAAAAGGAAAAGTTT 59.820 33.333 0.00 0.00 0.00 2.66
485 486 7.278646 CAGAAGGAAAGGAAAAGGAAAAGTTTG 59.721 37.037 0.00 0.00 0.00 2.93
486 487 6.620877 AGGAAAGGAAAAGGAAAAGTTTGT 57.379 33.333 0.00 0.00 0.00 2.83
487 488 7.016153 AGGAAAGGAAAAGGAAAAGTTTGTT 57.984 32.000 0.00 0.00 0.00 2.83
488 489 8.141298 AGGAAAGGAAAAGGAAAAGTTTGTTA 57.859 30.769 0.00 0.00 0.00 2.41
489 490 8.258007 AGGAAAGGAAAAGGAAAAGTTTGTTAG 58.742 33.333 0.00 0.00 0.00 2.34
490 491 7.011109 GGAAAGGAAAAGGAAAAGTTTGTTAGC 59.989 37.037 0.00 0.00 0.00 3.09
491 492 6.791867 AGGAAAAGGAAAAGTTTGTTAGCT 57.208 33.333 0.00 0.00 0.00 3.32
492 493 7.182817 AGGAAAAGGAAAAGTTTGTTAGCTT 57.817 32.000 0.00 0.00 0.00 3.74
493 494 7.265673 AGGAAAAGGAAAAGTTTGTTAGCTTC 58.734 34.615 0.00 0.00 0.00 3.86
494 495 7.124298 AGGAAAAGGAAAAGTTTGTTAGCTTCT 59.876 33.333 0.00 0.00 0.00 2.85
495 496 8.410912 GGAAAAGGAAAAGTTTGTTAGCTTCTA 58.589 33.333 0.00 0.00 0.00 2.10
496 497 9.797556 GAAAAGGAAAAGTTTGTTAGCTTCTAA 57.202 29.630 0.00 0.00 0.00 2.10
524 525 8.457238 AAAAGATGAAGAGTTTGTTAGCTTCT 57.543 30.769 0.00 0.00 38.03 2.85
525 526 9.561069 AAAAGATGAAGAGTTTGTTAGCTTCTA 57.439 29.630 0.00 0.00 38.03 2.10
526 527 8.541133 AAGATGAAGAGTTTGTTAGCTTCTAC 57.459 34.615 0.00 0.00 38.03 2.59
527 528 7.671302 AGATGAAGAGTTTGTTAGCTTCTACA 58.329 34.615 0.00 0.00 38.03 2.74
528 529 8.150945 AGATGAAGAGTTTGTTAGCTTCTACAA 58.849 33.333 0.00 0.00 38.03 2.41
529 530 7.715265 TGAAGAGTTTGTTAGCTTCTACAAG 57.285 36.000 0.00 0.00 38.03 3.16
530 531 7.497595 TGAAGAGTTTGTTAGCTTCTACAAGA 58.502 34.615 0.00 0.00 38.03 3.02
531 532 7.985184 TGAAGAGTTTGTTAGCTTCTACAAGAA 59.015 33.333 0.00 0.00 38.03 2.52
532 533 8.732746 AAGAGTTTGTTAGCTTCTACAAGAAA 57.267 30.769 0.00 0.00 35.83 2.52
533 534 8.144155 AGAGTTTGTTAGCTTCTACAAGAAAC 57.856 34.615 9.70 9.70 36.32 2.78
534 535 7.226918 AGAGTTTGTTAGCTTCTACAAGAAACC 59.773 37.037 12.71 7.06 36.57 3.27
535 536 7.054751 AGTTTGTTAGCTTCTACAAGAAACCT 58.945 34.615 12.71 2.24 36.57 3.50
536 537 8.208903 AGTTTGTTAGCTTCTACAAGAAACCTA 58.791 33.333 12.71 0.00 36.57 3.08
537 538 9.000486 GTTTGTTAGCTTCTACAAGAAACCTAT 58.000 33.333 7.39 0.00 35.83 2.57
542 543 9.832445 TTAGCTTCTACAAGAAACCTATAATGG 57.168 33.333 0.00 0.00 33.19 3.16
543 544 7.283329 AGCTTCTACAAGAAACCTATAATGGG 58.717 38.462 0.00 0.00 33.19 4.00
544 545 6.017026 GCTTCTACAAGAAACCTATAATGGGC 60.017 42.308 0.00 0.00 33.19 5.36
545 546 5.937111 TCTACAAGAAACCTATAATGGGCC 58.063 41.667 0.00 0.00 0.00 5.80
546 547 3.551846 ACAAGAAACCTATAATGGGCCG 58.448 45.455 0.00 0.00 0.00 6.13
547 548 3.201266 ACAAGAAACCTATAATGGGCCGA 59.799 43.478 0.00 0.00 0.00 5.54
548 549 3.771577 AGAAACCTATAATGGGCCGAG 57.228 47.619 0.00 0.00 0.00 4.63
549 550 2.152016 GAAACCTATAATGGGCCGAGC 58.848 52.381 0.00 0.00 0.00 5.03
550 551 1.435256 AACCTATAATGGGCCGAGCT 58.565 50.000 0.00 0.00 0.00 4.09
551 552 2.320681 ACCTATAATGGGCCGAGCTA 57.679 50.000 0.00 0.00 0.00 3.32
552 553 2.834113 ACCTATAATGGGCCGAGCTAT 58.166 47.619 0.00 0.00 0.00 2.97
553 554 2.501723 ACCTATAATGGGCCGAGCTATG 59.498 50.000 0.00 0.00 0.00 2.23
554 555 2.555199 CTATAATGGGCCGAGCTATGC 58.445 52.381 0.00 0.00 0.00 3.14
555 556 0.391661 ATAATGGGCCGAGCTATGCG 60.392 55.000 0.00 0.00 0.00 4.73
556 557 1.468506 TAATGGGCCGAGCTATGCGA 61.469 55.000 0.00 0.00 0.00 5.10
557 558 2.721971 AATGGGCCGAGCTATGCGAG 62.722 60.000 0.00 0.00 0.00 5.03
569 570 1.789464 CTATGCGAGCTTTGACGATCC 59.211 52.381 0.00 0.00 0.00 3.36
570 571 0.108186 ATGCGAGCTTTGACGATCCA 60.108 50.000 0.00 0.00 0.00 3.41
571 572 0.320334 TGCGAGCTTTGACGATCCAA 60.320 50.000 0.00 0.00 0.00 3.53
572 573 1.009829 GCGAGCTTTGACGATCCAAT 58.990 50.000 0.00 0.00 0.00 3.16
573 574 1.004504 GCGAGCTTTGACGATCCAATC 60.005 52.381 0.00 0.00 0.00 2.67
581 582 3.341043 CGATCCAATCGCAGGCCG 61.341 66.667 0.00 0.00 46.55 6.13
582 583 2.203070 GATCCAATCGCAGGCCGT 60.203 61.111 0.00 0.00 38.35 5.68
583 584 2.203070 ATCCAATCGCAGGCCGTC 60.203 61.111 0.00 0.00 38.35 4.79
584 585 4.812476 TCCAATCGCAGGCCGTCG 62.812 66.667 12.54 12.54 38.35 5.12
586 587 3.554692 CAATCGCAGGCCGTCGTC 61.555 66.667 17.01 0.00 38.35 4.20
587 588 4.814294 AATCGCAGGCCGTCGTCC 62.814 66.667 17.01 0.00 38.35 4.79
590 591 3.900892 CGCAGGCCGTCGTCCTAT 61.901 66.667 10.86 0.00 31.52 2.57
591 592 2.499685 GCAGGCCGTCGTCCTATT 59.500 61.111 0.00 0.00 31.52 1.73
592 593 1.591863 GCAGGCCGTCGTCCTATTC 60.592 63.158 0.00 0.00 31.52 1.75
593 594 1.813859 CAGGCCGTCGTCCTATTCA 59.186 57.895 0.00 0.00 31.52 2.57
594 595 0.527817 CAGGCCGTCGTCCTATTCAC 60.528 60.000 0.00 0.00 31.52 3.18
595 596 1.227176 GGCCGTCGTCCTATTCACC 60.227 63.158 0.00 0.00 0.00 4.02
596 597 1.227176 GCCGTCGTCCTATTCACCC 60.227 63.158 0.00 0.00 0.00 4.61
597 598 1.440476 CCGTCGTCCTATTCACCCC 59.560 63.158 0.00 0.00 0.00 4.95
598 599 1.065273 CGTCGTCCTATTCACCCCG 59.935 63.158 0.00 0.00 0.00 5.73
599 600 1.378882 CGTCGTCCTATTCACCCCGA 61.379 60.000 0.00 0.00 0.00 5.14
600 601 0.384669 GTCGTCCTATTCACCCCGAG 59.615 60.000 0.00 0.00 0.00 4.63
601 602 1.067582 CGTCCTATTCACCCCGAGC 59.932 63.158 0.00 0.00 0.00 5.03
602 603 1.446366 GTCCTATTCACCCCGAGCC 59.554 63.158 0.00 0.00 0.00 4.70
603 604 1.764854 TCCTATTCACCCCGAGCCC 60.765 63.158 0.00 0.00 0.00 5.19
604 605 2.070039 CCTATTCACCCCGAGCCCA 61.070 63.158 0.00 0.00 0.00 5.36
605 606 1.447643 CTATTCACCCCGAGCCCAG 59.552 63.158 0.00 0.00 0.00 4.45
606 607 2.666596 CTATTCACCCCGAGCCCAGC 62.667 65.000 0.00 0.00 0.00 4.85
612 613 4.351054 CCCGAGCCCAGCCAAACT 62.351 66.667 0.00 0.00 0.00 2.66
613 614 2.747855 CCGAGCCCAGCCAAACTC 60.748 66.667 0.00 0.00 0.00 3.01
614 615 2.348998 CGAGCCCAGCCAAACTCT 59.651 61.111 0.00 0.00 0.00 3.24
615 616 1.596934 CGAGCCCAGCCAAACTCTA 59.403 57.895 0.00 0.00 0.00 2.43
616 617 0.741221 CGAGCCCAGCCAAACTCTAC 60.741 60.000 0.00 0.00 0.00 2.59
617 618 0.324943 GAGCCCAGCCAAACTCTACA 59.675 55.000 0.00 0.00 0.00 2.74
618 619 0.995024 AGCCCAGCCAAACTCTACAT 59.005 50.000 0.00 0.00 0.00 2.29
619 620 1.355720 AGCCCAGCCAAACTCTACATT 59.644 47.619 0.00 0.00 0.00 2.71
620 621 2.576191 AGCCCAGCCAAACTCTACATTA 59.424 45.455 0.00 0.00 0.00 1.90
621 622 3.203040 AGCCCAGCCAAACTCTACATTAT 59.797 43.478 0.00 0.00 0.00 1.28
622 623 3.565902 GCCCAGCCAAACTCTACATTATC 59.434 47.826 0.00 0.00 0.00 1.75
623 624 4.687219 GCCCAGCCAAACTCTACATTATCT 60.687 45.833 0.00 0.00 0.00 1.98
624 625 5.059833 CCCAGCCAAACTCTACATTATCTC 58.940 45.833 0.00 0.00 0.00 2.75
625 626 5.059833 CCAGCCAAACTCTACATTATCTCC 58.940 45.833 0.00 0.00 0.00 3.71
626 627 5.396772 CCAGCCAAACTCTACATTATCTCCA 60.397 44.000 0.00 0.00 0.00 3.86
627 628 5.757320 CAGCCAAACTCTACATTATCTCCAG 59.243 44.000 0.00 0.00 0.00 3.86
628 629 5.663106 AGCCAAACTCTACATTATCTCCAGA 59.337 40.000 0.00 0.00 0.00 3.86
629 630 5.755861 GCCAAACTCTACATTATCTCCAGAC 59.244 44.000 0.00 0.00 0.00 3.51
630 631 6.284459 CCAAACTCTACATTATCTCCAGACC 58.716 44.000 0.00 0.00 0.00 3.85
631 632 6.284459 CAAACTCTACATTATCTCCAGACCC 58.716 44.000 0.00 0.00 0.00 4.46
632 633 4.145807 ACTCTACATTATCTCCAGACCCG 58.854 47.826 0.00 0.00 0.00 5.28
633 634 3.497332 TCTACATTATCTCCAGACCCGG 58.503 50.000 0.00 0.00 0.00 5.73
634 635 0.759346 ACATTATCTCCAGACCCGGC 59.241 55.000 0.00 0.00 0.00 6.13
635 636 0.035458 CATTATCTCCAGACCCGGCC 59.965 60.000 0.00 0.00 0.00 6.13
636 637 1.472662 ATTATCTCCAGACCCGGCCG 61.473 60.000 21.04 21.04 0.00 6.13
637 638 2.866523 TTATCTCCAGACCCGGCCGT 62.867 60.000 26.12 6.07 0.00 5.68
656 657 3.804193 CCGCCTCGGCAAAGCTTC 61.804 66.667 8.87 0.00 41.17 3.86
657 658 3.049674 CGCCTCGGCAAAGCTTCA 61.050 61.111 8.87 0.00 42.06 3.02
658 659 2.616330 CGCCTCGGCAAAGCTTCAA 61.616 57.895 8.87 0.00 42.06 2.69
659 660 1.081175 GCCTCGGCAAAGCTTCAAC 60.081 57.895 0.00 0.00 41.49 3.18
660 661 1.581447 CCTCGGCAAAGCTTCAACC 59.419 57.895 0.00 0.36 0.00 3.77
661 662 0.890996 CCTCGGCAAAGCTTCAACCT 60.891 55.000 0.00 0.00 0.00 3.50
662 663 0.954452 CTCGGCAAAGCTTCAACCTT 59.046 50.000 0.00 0.00 0.00 3.50
663 664 1.338020 CTCGGCAAAGCTTCAACCTTT 59.662 47.619 0.00 0.00 33.03 3.11
665 666 1.202405 CGGCAAAGCTTCAACCTTTGT 60.202 47.619 0.00 0.00 46.69 2.83
666 667 2.473816 GGCAAAGCTTCAACCTTTGTC 58.526 47.619 0.00 8.72 46.69 3.18
667 668 2.101415 GGCAAAGCTTCAACCTTTGTCT 59.899 45.455 0.00 0.00 46.17 3.41
668 669 3.375642 GCAAAGCTTCAACCTTTGTCTC 58.624 45.455 0.00 0.00 46.69 3.36
669 670 3.181487 GCAAAGCTTCAACCTTTGTCTCA 60.181 43.478 0.00 0.00 46.69 3.27
670 671 4.677779 GCAAAGCTTCAACCTTTGTCTCAA 60.678 41.667 0.00 0.00 46.69 3.02
671 672 5.410067 CAAAGCTTCAACCTTTGTCTCAAA 58.590 37.500 0.00 0.00 42.47 2.69
672 673 4.907879 AGCTTCAACCTTTGTCTCAAAG 57.092 40.909 13.28 13.28 0.00 2.77
673 674 4.526970 AGCTTCAACCTTTGTCTCAAAGA 58.473 39.130 19.55 0.00 0.00 2.52
674 675 4.949856 AGCTTCAACCTTTGTCTCAAAGAA 59.050 37.500 19.55 8.40 0.00 2.52
675 676 5.418840 AGCTTCAACCTTTGTCTCAAAGAAA 59.581 36.000 19.55 9.77 0.00 2.52
676 677 6.071391 AGCTTCAACCTTTGTCTCAAAGAAAA 60.071 34.615 19.55 9.52 0.00 2.29
677 678 6.589907 GCTTCAACCTTTGTCTCAAAGAAAAA 59.410 34.615 19.55 1.13 31.11 1.94
697 698 2.223537 AAAAGGCAAAGCTTCAACCG 57.776 45.000 0.00 0.00 0.00 4.44
698 699 1.111277 AAAGGCAAAGCTTCAACCGT 58.889 45.000 0.00 0.00 0.00 4.83
703 704 1.223187 CAAAGCTTCAACCGTACCGT 58.777 50.000 0.00 0.00 0.00 4.83
714 715 0.041488 CCGTACCGTATCTGTCTCGC 60.041 60.000 0.00 0.00 0.00 5.03
717 718 2.223203 CGTACCGTATCTGTCTCGCTTT 60.223 50.000 0.00 0.00 0.00 3.51
721 722 2.159226 CCGTATCTGTCTCGCTTTCCTT 60.159 50.000 0.00 0.00 0.00 3.36
722 723 2.854777 CGTATCTGTCTCGCTTTCCTTG 59.145 50.000 0.00 0.00 0.00 3.61
723 724 3.427638 CGTATCTGTCTCGCTTTCCTTGA 60.428 47.826 0.00 0.00 0.00 3.02
724 725 3.685139 ATCTGTCTCGCTTTCCTTGAA 57.315 42.857 0.00 0.00 0.00 2.69
725 726 2.755650 TCTGTCTCGCTTTCCTTGAAC 58.244 47.619 0.00 0.00 0.00 3.18
729 730 2.221981 GTCTCGCTTTCCTTGAACACAG 59.778 50.000 0.00 0.00 0.00 3.66
738 739 5.914898 TTCCTTGAACACAGATCGATCTA 57.085 39.130 26.87 8.40 34.85 1.98
743 744 7.937394 TCCTTGAACACAGATCGATCTACTATA 59.063 37.037 26.87 9.95 34.85 1.31
753 754 6.987992 AGATCGATCTACTATACGGGAGATTC 59.012 42.308 26.27 0.00 34.85 2.52
767 768 0.392706 AGATTCGGCGGCATGTCATA 59.607 50.000 10.53 0.00 0.00 2.15
832 833 4.446413 ACGACGAATCCCCGTGGC 62.446 66.667 0.00 0.00 43.49 5.01
915 916 1.028330 TCGACTATGTCCGCTTCCGT 61.028 55.000 0.00 0.00 0.00 4.69
1084 1085 2.278857 CAGGGATCTTCGTCCGCG 60.279 66.667 0.00 0.00 39.26 6.46
1112 1113 3.648528 CGCTTCTCACGGATCATCA 57.351 52.632 0.00 0.00 0.00 3.07
1127 1128 2.762234 ATCACGTCCTCGACTCGCC 61.762 63.158 0.00 0.00 40.62 5.54
1157 1158 1.004044 CCTCCTCCTGCAACACAATCT 59.996 52.381 0.00 0.00 0.00 2.40
1169 1176 1.511464 ACAATCTCGACGACGACGC 60.511 57.895 14.67 0.00 43.81 5.19
1203 1210 1.519455 CAATCCTCTCACCGGCGAC 60.519 63.158 9.30 0.00 0.00 5.19
1257 1264 5.904080 CGTGGAAATCTATTTTGATTCGCTC 59.096 40.000 0.00 0.00 35.82 5.03
1332 1339 3.627218 GCCGCCGTCGCACTATTC 61.627 66.667 0.00 0.00 34.03 1.75
1336 1343 1.472276 CGCCGTCGCACTATTCAGTC 61.472 60.000 0.00 0.00 30.46 3.51
1374 1381 1.437772 CTACCACGAGAGATCGGCGT 61.438 60.000 6.85 5.02 39.04 5.68
1380 1387 1.066587 GAGAGATCGGCGTTGGAGG 59.933 63.158 6.85 0.00 0.00 4.30
1398 1405 2.686816 GGTCGCAACATGGAACCCG 61.687 63.158 0.00 0.00 0.00 5.28
2208 2353 4.032900 CCAAAGTGTGATGCGTGTAGATAC 59.967 45.833 0.00 0.00 0.00 2.24
2241 2386 5.929992 CGTGTGGAAGTCTTTTCCTGTTATA 59.070 40.000 7.39 0.00 39.31 0.98
2842 3037 3.357079 GTCACGCACAAGGGCTGG 61.357 66.667 0.00 0.00 0.00 4.85
2843 3038 3.872603 TCACGCACAAGGGCTGGT 61.873 61.111 0.00 0.00 0.00 4.00
2844 3039 3.663176 CACGCACAAGGGCTGGTG 61.663 66.667 0.00 0.00 38.05 4.17
2845 3040 4.189580 ACGCACAAGGGCTGGTGT 62.190 61.111 0.00 0.00 37.35 4.16
2846 3041 3.663176 CGCACAAGGGCTGGTGTG 61.663 66.667 10.16 10.16 46.40 3.82
2847 3042 2.519302 GCACAAGGGCTGGTGTGT 60.519 61.111 14.17 0.00 45.60 3.72
2848 3043 2.848858 GCACAAGGGCTGGTGTGTG 61.849 63.158 14.17 8.42 45.60 3.82
2849 3044 2.195567 CACAAGGGCTGGTGTGTGG 61.196 63.158 7.34 0.00 40.22 4.17
2850 3045 2.598394 CAAGGGCTGGTGTGTGGG 60.598 66.667 0.00 0.00 0.00 4.61
2851 3046 4.603535 AAGGGCTGGTGTGTGGGC 62.604 66.667 0.00 0.00 0.00 5.36
2853 3048 4.684134 GGGCTGGTGTGTGGGCAT 62.684 66.667 0.00 0.00 0.00 4.40
2854 3049 2.601367 GGCTGGTGTGTGGGCATT 60.601 61.111 0.00 0.00 0.00 3.56
2855 3050 2.209315 GGCTGGTGTGTGGGCATTT 61.209 57.895 0.00 0.00 0.00 2.32
2856 3051 0.897863 GGCTGGTGTGTGGGCATTTA 60.898 55.000 0.00 0.00 0.00 1.40
2857 3052 0.527565 GCTGGTGTGTGGGCATTTAG 59.472 55.000 0.00 0.00 0.00 1.85
2858 3053 0.527565 CTGGTGTGTGGGCATTTAGC 59.472 55.000 0.00 0.00 44.65 3.09
2868 3063 2.179764 GCATTTAGCAGTTCGCCCA 58.820 52.632 0.00 0.00 44.04 5.36
2869 3064 0.179163 GCATTTAGCAGTTCGCCCAC 60.179 55.000 0.00 0.00 44.04 4.61
2870 3065 1.164411 CATTTAGCAGTTCGCCCACA 58.836 50.000 0.00 0.00 44.04 4.17
2871 3066 1.135689 CATTTAGCAGTTCGCCCACAC 60.136 52.381 0.00 0.00 44.04 3.82
2872 3067 0.179043 TTTAGCAGTTCGCCCACACA 60.179 50.000 0.00 0.00 44.04 3.72
2873 3068 0.882927 TTAGCAGTTCGCCCACACAC 60.883 55.000 0.00 0.00 44.04 3.82
2874 3069 2.725203 TAGCAGTTCGCCCACACACC 62.725 60.000 0.00 0.00 44.04 4.16
2875 3070 2.203139 CAGTTCGCCCACACACCA 60.203 61.111 0.00 0.00 0.00 4.17
2876 3071 2.111043 AGTTCGCCCACACACCAG 59.889 61.111 0.00 0.00 0.00 4.00
2877 3072 2.203153 GTTCGCCCACACACCAGT 60.203 61.111 0.00 0.00 0.00 4.00
2878 3073 1.822186 GTTCGCCCACACACCAGTT 60.822 57.895 0.00 0.00 0.00 3.16
2879 3074 1.077357 TTCGCCCACACACCAGTTT 60.077 52.632 0.00 0.00 0.00 2.66
2880 3075 0.681564 TTCGCCCACACACCAGTTTT 60.682 50.000 0.00 0.00 0.00 2.43
2881 3076 1.098712 TCGCCCACACACCAGTTTTC 61.099 55.000 0.00 0.00 0.00 2.29
2882 3077 1.380403 CGCCCACACACCAGTTTTCA 61.380 55.000 0.00 0.00 0.00 2.69
2883 3078 0.385390 GCCCACACACCAGTTTTCAG 59.615 55.000 0.00 0.00 0.00 3.02
2884 3079 1.762708 CCCACACACCAGTTTTCAGT 58.237 50.000 0.00 0.00 0.00 3.41
2885 3080 1.676006 CCCACACACCAGTTTTCAGTC 59.324 52.381 0.00 0.00 0.00 3.51
2886 3081 2.364632 CCACACACCAGTTTTCAGTCA 58.635 47.619 0.00 0.00 0.00 3.41
2887 3082 2.097466 CCACACACCAGTTTTCAGTCAC 59.903 50.000 0.00 0.00 0.00 3.67
2888 3083 2.006888 ACACACCAGTTTTCAGTCACG 58.993 47.619 0.00 0.00 0.00 4.35
2889 3084 1.014352 ACACCAGTTTTCAGTCACGC 58.986 50.000 0.00 0.00 0.00 5.34
2890 3085 1.013596 CACCAGTTTTCAGTCACGCA 58.986 50.000 0.00 0.00 0.00 5.24
2891 3086 1.014352 ACCAGTTTTCAGTCACGCAC 58.986 50.000 0.00 0.00 0.00 5.34
2892 3087 1.013596 CCAGTTTTCAGTCACGCACA 58.986 50.000 0.00 0.00 0.00 4.57
2893 3088 1.400142 CCAGTTTTCAGTCACGCACAA 59.600 47.619 0.00 0.00 0.00 3.33
2894 3089 2.539547 CCAGTTTTCAGTCACGCACAAG 60.540 50.000 0.00 0.00 0.00 3.16
2895 3090 1.670811 AGTTTTCAGTCACGCACAAGG 59.329 47.619 0.00 0.00 0.00 3.61
2896 3091 1.021202 TTTTCAGTCACGCACAAGGG 58.979 50.000 0.00 0.00 0.00 3.95
2897 3092 1.444119 TTTCAGTCACGCACAAGGGC 61.444 55.000 0.00 0.00 0.00 5.19
2898 3093 2.281070 CAGTCACGCACAAGGGCT 60.281 61.111 0.00 0.00 0.00 5.19
2899 3094 2.281070 AGTCACGCACAAGGGCTG 60.281 61.111 0.00 0.00 0.00 4.85
2958 3153 0.890996 CTCTCCCACACCCAAGTTGC 60.891 60.000 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 8.994500 ACTAAAAGAAAAGGGGTTTTCCATAAA 58.006 29.630 6.93 0.00 40.75 1.40
23 24 8.555896 ACTAAAAGAAAAGGGGTTTTCCATAA 57.444 30.769 6.93 0.00 40.75 1.90
24 25 8.555896 AACTAAAAGAAAAGGGGTTTTCCATA 57.444 30.769 6.93 0.00 40.75 2.74
25 26 7.446106 AACTAAAAGAAAAGGGGTTTTCCAT 57.554 32.000 6.93 0.00 40.75 3.41
26 27 6.877668 AACTAAAAGAAAAGGGGTTTTCCA 57.122 33.333 6.93 0.00 40.75 3.53
27 28 8.570068 AAAAACTAAAAGAAAAGGGGTTTTCC 57.430 30.769 6.93 0.00 40.75 3.13
28 29 9.221933 TGAAAAACTAAAAGAAAAGGGGTTTTC 57.778 29.630 0.00 0.00 40.30 2.29
29 30 9.747898 ATGAAAAACTAAAAGAAAAGGGGTTTT 57.252 25.926 0.00 0.00 37.11 2.43
30 31 9.747898 AATGAAAAACTAAAAGAAAAGGGGTTT 57.252 25.926 0.00 0.00 0.00 3.27
31 32 9.747898 AAATGAAAAACTAAAAGAAAAGGGGTT 57.252 25.926 0.00 0.00 0.00 4.11
37 38 9.332502 GCCCCTAAATGAAAAACTAAAAGAAAA 57.667 29.630 0.00 0.00 0.00 2.29
38 39 8.487028 TGCCCCTAAATGAAAAACTAAAAGAAA 58.513 29.630 0.00 0.00 0.00 2.52
39 40 8.024145 TGCCCCTAAATGAAAAACTAAAAGAA 57.976 30.769 0.00 0.00 0.00 2.52
40 41 7.289084 ACTGCCCCTAAATGAAAAACTAAAAGA 59.711 33.333 0.00 0.00 0.00 2.52
41 42 7.441836 ACTGCCCCTAAATGAAAAACTAAAAG 58.558 34.615 0.00 0.00 0.00 2.27
42 43 7.368198 ACTGCCCCTAAATGAAAAACTAAAA 57.632 32.000 0.00 0.00 0.00 1.52
43 44 6.987403 ACTGCCCCTAAATGAAAAACTAAA 57.013 33.333 0.00 0.00 0.00 1.85
44 45 9.403583 CTATACTGCCCCTAAATGAAAAACTAA 57.596 33.333 0.00 0.00 0.00 2.24
45 46 8.774183 TCTATACTGCCCCTAAATGAAAAACTA 58.226 33.333 0.00 0.00 0.00 2.24
46 47 7.639378 TCTATACTGCCCCTAAATGAAAAACT 58.361 34.615 0.00 0.00 0.00 2.66
47 48 7.875327 TCTATACTGCCCCTAAATGAAAAAC 57.125 36.000 0.00 0.00 0.00 2.43
49 50 9.793259 CTAATCTATACTGCCCCTAAATGAAAA 57.207 33.333 0.00 0.00 0.00 2.29
50 51 8.945193 ACTAATCTATACTGCCCCTAAATGAAA 58.055 33.333 0.00 0.00 0.00 2.69
51 52 8.506196 ACTAATCTATACTGCCCCTAAATGAA 57.494 34.615 0.00 0.00 0.00 2.57
52 53 9.610104 TTACTAATCTATACTGCCCCTAAATGA 57.390 33.333 0.00 0.00 0.00 2.57
56 57 8.319146 GCATTTACTAATCTATACTGCCCCTAA 58.681 37.037 0.00 0.00 0.00 2.69
57 58 7.093024 GGCATTTACTAATCTATACTGCCCCTA 60.093 40.741 0.00 0.00 0.00 3.53
58 59 6.296489 GGCATTTACTAATCTATACTGCCCCT 60.296 42.308 0.00 0.00 0.00 4.79
59 60 5.880887 GGCATTTACTAATCTATACTGCCCC 59.119 44.000 0.00 0.00 0.00 5.80
60 61 6.712276 AGGCATTTACTAATCTATACTGCCC 58.288 40.000 6.14 0.00 38.21 5.36
61 62 8.311836 TGTAGGCATTTACTAATCTATACTGCC 58.688 37.037 0.00 0.00 37.78 4.85
62 63 9.877178 ATGTAGGCATTTACTAATCTATACTGC 57.123 33.333 0.00 0.00 29.54 4.40
64 65 9.877178 GCATGTAGGCATTTACTAATCTATACT 57.123 33.333 0.00 0.00 31.99 2.12
65 66 9.653287 TGCATGTAGGCATTTACTAATCTATAC 57.347 33.333 0.00 0.00 39.25 1.47
67 68 9.745018 ATTGCATGTAGGCATTTACTAATCTAT 57.255 29.630 0.00 0.00 44.48 1.98
68 69 9.002600 CATTGCATGTAGGCATTTACTAATCTA 57.997 33.333 0.00 0.00 44.48 1.98
69 70 7.522725 GCATTGCATGTAGGCATTTACTAATCT 60.523 37.037 3.15 0.00 44.48 2.40
70 71 6.583806 GCATTGCATGTAGGCATTTACTAATC 59.416 38.462 3.15 0.00 44.48 1.75
71 72 6.040729 TGCATTGCATGTAGGCATTTACTAAT 59.959 34.615 7.38 0.00 44.48 1.73
72 73 5.359292 TGCATTGCATGTAGGCATTTACTAA 59.641 36.000 7.38 0.00 44.48 2.24
73 74 4.886489 TGCATTGCATGTAGGCATTTACTA 59.114 37.500 7.38 0.00 44.48 1.82
74 75 3.700539 TGCATTGCATGTAGGCATTTACT 59.299 39.130 7.38 0.00 44.48 2.24
75 76 3.798337 GTGCATTGCATGTAGGCATTTAC 59.202 43.478 15.49 0.00 44.48 2.01
76 77 3.488890 CGTGCATTGCATGTAGGCATTTA 60.489 43.478 20.40 0.00 44.48 1.40
77 78 2.736081 CGTGCATTGCATGTAGGCATTT 60.736 45.455 20.40 0.00 44.48 2.32
78 79 1.202325 CGTGCATTGCATGTAGGCATT 60.202 47.619 20.40 0.00 44.48 3.56
79 80 0.382873 CGTGCATTGCATGTAGGCAT 59.617 50.000 20.40 0.00 44.48 4.40
80 81 1.801983 CGTGCATTGCATGTAGGCA 59.198 52.632 20.40 7.87 41.91 4.75
81 82 4.696078 CGTGCATTGCATGTAGGC 57.304 55.556 20.40 3.90 41.91 3.93
87 88 6.633500 ACCTAATATTAACGTGCATTGCAT 57.367 33.333 15.49 1.17 41.91 3.96
88 89 6.764085 ACTACCTAATATTAACGTGCATTGCA 59.236 34.615 7.38 7.38 35.60 4.08
89 90 7.186021 ACTACCTAATATTAACGTGCATTGC 57.814 36.000 0.46 0.46 0.00 3.56
119 120 9.777297 TCATACACATAATATACACATGCAGTT 57.223 29.630 0.00 0.00 0.00 3.16
120 121 9.948964 ATCATACACATAATATACACATGCAGT 57.051 29.630 0.00 0.00 0.00 4.40
156 157 9.730420 CCCAAGCACTAATAACATAATTAACAC 57.270 33.333 0.00 0.00 0.00 3.32
157 158 9.688091 TCCCAAGCACTAATAACATAATTAACA 57.312 29.630 0.00 0.00 0.00 2.41
161 162 8.995027 TCATCCCAAGCACTAATAACATAATT 57.005 30.769 0.00 0.00 0.00 1.40
162 163 9.017509 CATCATCCCAAGCACTAATAACATAAT 57.982 33.333 0.00 0.00 0.00 1.28
163 164 7.998383 ACATCATCCCAAGCACTAATAACATAA 59.002 33.333 0.00 0.00 0.00 1.90
164 165 7.517320 ACATCATCCCAAGCACTAATAACATA 58.483 34.615 0.00 0.00 0.00 2.29
165 166 6.367983 ACATCATCCCAAGCACTAATAACAT 58.632 36.000 0.00 0.00 0.00 2.71
166 167 5.754782 ACATCATCCCAAGCACTAATAACA 58.245 37.500 0.00 0.00 0.00 2.41
167 168 6.699575 AACATCATCCCAAGCACTAATAAC 57.300 37.500 0.00 0.00 0.00 1.89
168 169 8.849168 CAATAACATCATCCCAAGCACTAATAA 58.151 33.333 0.00 0.00 0.00 1.40
169 170 7.040478 GCAATAACATCATCCCAAGCACTAATA 60.040 37.037 0.00 0.00 0.00 0.98
170 171 6.239120 GCAATAACATCATCCCAAGCACTAAT 60.239 38.462 0.00 0.00 0.00 1.73
171 172 5.067674 GCAATAACATCATCCCAAGCACTAA 59.932 40.000 0.00 0.00 0.00 2.24
172 173 4.580167 GCAATAACATCATCCCAAGCACTA 59.420 41.667 0.00 0.00 0.00 2.74
173 174 3.382546 GCAATAACATCATCCCAAGCACT 59.617 43.478 0.00 0.00 0.00 4.40
174 175 3.130869 TGCAATAACATCATCCCAAGCAC 59.869 43.478 0.00 0.00 0.00 4.40
175 176 3.363627 TGCAATAACATCATCCCAAGCA 58.636 40.909 0.00 0.00 0.00 3.91
176 177 4.304110 CATGCAATAACATCATCCCAAGC 58.696 43.478 0.00 0.00 0.00 4.01
177 178 4.038763 AGCATGCAATAACATCATCCCAAG 59.961 41.667 21.98 0.00 0.00 3.61
178 179 3.962063 AGCATGCAATAACATCATCCCAA 59.038 39.130 21.98 0.00 0.00 4.12
179 180 3.568443 AGCATGCAATAACATCATCCCA 58.432 40.909 21.98 0.00 0.00 4.37
180 181 5.710513 TTAGCATGCAATAACATCATCCC 57.289 39.130 21.98 0.00 0.00 3.85
181 182 6.418819 GTGTTTAGCATGCAATAACATCATCC 59.581 38.462 25.00 14.10 32.10 3.51
182 183 6.141211 CGTGTTTAGCATGCAATAACATCATC 59.859 38.462 25.00 15.86 32.10 2.92
183 184 5.972973 CGTGTTTAGCATGCAATAACATCAT 59.027 36.000 25.00 5.10 32.10 2.45
184 185 5.106357 ACGTGTTTAGCATGCAATAACATCA 60.106 36.000 25.00 11.96 37.62 3.07
185 186 5.331902 ACGTGTTTAGCATGCAATAACATC 58.668 37.500 25.00 19.19 37.62 3.06
186 187 5.309323 ACGTGTTTAGCATGCAATAACAT 57.691 34.783 25.00 13.92 37.62 2.71
187 188 4.757799 ACGTGTTTAGCATGCAATAACA 57.242 36.364 21.98 21.39 37.62 2.41
188 189 5.150683 TCAACGTGTTTAGCATGCAATAAC 58.849 37.500 21.98 19.20 37.62 1.89
189 190 5.363979 TCAACGTGTTTAGCATGCAATAA 57.636 34.783 21.98 7.93 37.62 1.40
190 191 4.671508 GCTCAACGTGTTTAGCATGCAATA 60.672 41.667 21.98 0.73 39.07 1.90
191 192 3.825308 CTCAACGTGTTTAGCATGCAAT 58.175 40.909 21.98 1.90 37.62 3.56
192 193 2.604373 GCTCAACGTGTTTAGCATGCAA 60.604 45.455 21.98 9.44 39.07 4.08
193 194 1.069296 GCTCAACGTGTTTAGCATGCA 60.069 47.619 21.98 2.77 39.07 3.96
194 195 1.606606 GCTCAACGTGTTTAGCATGC 58.393 50.000 10.51 10.51 39.07 4.06
195 196 1.869503 CGCTCAACGTGTTTAGCATG 58.130 50.000 16.51 0.00 39.16 4.06
196 197 0.165944 GCGCTCAACGTGTTTAGCAT 59.834 50.000 16.51 0.00 46.11 3.79
197 198 0.878523 AGCGCTCAACGTGTTTAGCA 60.879 50.000 2.64 0.00 46.11 3.49
198 199 0.179248 GAGCGCTCAACGTGTTTAGC 60.179 55.000 31.91 8.50 46.11 3.09
199 200 0.091344 CGAGCGCTCAACGTGTTTAG 59.909 55.000 34.69 12.34 46.11 1.85
200 201 1.882682 GCGAGCGCTCAACGTGTTTA 61.883 55.000 34.69 0.00 46.11 2.01
201 202 2.928361 CGAGCGCTCAACGTGTTT 59.072 55.556 34.69 0.00 46.11 2.83
202 203 3.702555 GCGAGCGCTCAACGTGTT 61.703 61.111 34.69 0.00 46.11 3.32
207 208 4.430423 CAACGGCGAGCGCTCAAC 62.430 66.667 34.69 25.57 41.60 3.18
208 209 4.656117 TCAACGGCGAGCGCTCAA 62.656 61.111 34.69 9.59 41.60 3.02
209 210 4.656117 TTCAACGGCGAGCGCTCA 62.656 61.111 34.69 12.74 41.60 4.26
210 211 3.843240 CTTCAACGGCGAGCGCTC 61.843 66.667 27.64 27.64 41.60 5.03
213 214 4.139420 CTGCTTCAACGGCGAGCG 62.139 66.667 16.62 4.88 39.23 5.03
214 215 3.016474 GACTGCTTCAACGGCGAGC 62.016 63.158 16.62 13.21 36.95 5.03
215 216 1.221466 TTGACTGCTTCAACGGCGAG 61.221 55.000 16.62 5.73 39.45 5.03
216 217 1.221466 CTTGACTGCTTCAACGGCGA 61.221 55.000 16.62 0.00 39.45 5.54
217 218 1.205064 CTTGACTGCTTCAACGGCG 59.795 57.895 4.80 4.80 39.45 6.46
218 219 1.129437 GATCTTGACTGCTTCAACGGC 59.871 52.381 0.00 0.00 39.45 5.68
219 220 1.391485 CGATCTTGACTGCTTCAACGG 59.609 52.381 0.00 0.00 39.45 4.44
220 221 2.061773 ACGATCTTGACTGCTTCAACG 58.938 47.619 0.00 7.89 39.45 4.10
221 222 3.364366 CCAACGATCTTGACTGCTTCAAC 60.364 47.826 0.00 0.00 39.45 3.18
222 223 2.807967 CCAACGATCTTGACTGCTTCAA 59.192 45.455 0.00 1.99 42.26 2.69
223 224 2.037121 TCCAACGATCTTGACTGCTTCA 59.963 45.455 0.00 0.00 0.00 3.02
224 225 2.688507 TCCAACGATCTTGACTGCTTC 58.311 47.619 0.00 0.00 0.00 3.86
225 226 2.839486 TCCAACGATCTTGACTGCTT 57.161 45.000 0.00 0.00 0.00 3.91
226 227 3.005554 CAATCCAACGATCTTGACTGCT 58.994 45.455 0.00 0.00 0.00 4.24
227 228 3.002791 TCAATCCAACGATCTTGACTGC 58.997 45.455 0.00 0.00 0.00 4.40
228 229 3.372206 GGTCAATCCAACGATCTTGACTG 59.628 47.826 17.66 8.01 36.83 3.51
229 230 3.261897 AGGTCAATCCAACGATCTTGACT 59.738 43.478 17.66 6.41 36.83 3.41
230 231 3.372206 CAGGTCAATCCAACGATCTTGAC 59.628 47.826 12.50 12.50 36.28 3.18
231 232 3.599343 CAGGTCAATCCAACGATCTTGA 58.401 45.455 0.00 0.00 39.02 3.02
232 233 2.679837 CCAGGTCAATCCAACGATCTTG 59.320 50.000 0.00 0.00 39.02 3.02
233 234 2.571653 TCCAGGTCAATCCAACGATCTT 59.428 45.455 0.00 0.00 39.02 2.40
234 235 2.187958 TCCAGGTCAATCCAACGATCT 58.812 47.619 0.00 0.00 39.02 2.75
235 236 2.691409 TCCAGGTCAATCCAACGATC 57.309 50.000 0.00 0.00 39.02 3.69
236 237 3.054434 TCAATCCAGGTCAATCCAACGAT 60.054 43.478 0.00 0.00 39.02 3.73
237 238 2.304470 TCAATCCAGGTCAATCCAACGA 59.696 45.455 0.00 0.00 39.02 3.85
238 239 2.710377 TCAATCCAGGTCAATCCAACG 58.290 47.619 0.00 0.00 39.02 4.10
239 240 3.382546 CCATCAATCCAGGTCAATCCAAC 59.617 47.826 0.00 0.00 39.02 3.77
240 241 3.628002 CCCATCAATCCAGGTCAATCCAA 60.628 47.826 0.00 0.00 39.02 3.53
241 242 2.091720 CCCATCAATCCAGGTCAATCCA 60.092 50.000 0.00 0.00 39.02 3.41
242 243 2.590821 CCCATCAATCCAGGTCAATCC 58.409 52.381 0.00 0.00 0.00 3.01
243 244 1.959282 GCCCATCAATCCAGGTCAATC 59.041 52.381 0.00 0.00 0.00 2.67
244 245 1.751733 CGCCCATCAATCCAGGTCAAT 60.752 52.381 0.00 0.00 0.00 2.57
245 246 0.394216 CGCCCATCAATCCAGGTCAA 60.394 55.000 0.00 0.00 0.00 3.18
246 247 1.224315 CGCCCATCAATCCAGGTCA 59.776 57.895 0.00 0.00 0.00 4.02
247 248 1.097547 CACGCCCATCAATCCAGGTC 61.098 60.000 0.00 0.00 0.00 3.85
248 249 1.077501 CACGCCCATCAATCCAGGT 60.078 57.895 0.00 0.00 0.00 4.00
249 250 0.179009 ATCACGCCCATCAATCCAGG 60.179 55.000 0.00 0.00 0.00 4.45
250 251 1.233019 GATCACGCCCATCAATCCAG 58.767 55.000 0.00 0.00 0.00 3.86
251 252 0.545646 TGATCACGCCCATCAATCCA 59.454 50.000 0.00 0.00 0.00 3.41
252 253 1.233019 CTGATCACGCCCATCAATCC 58.767 55.000 0.00 0.00 29.74 3.01
253 254 1.959042 ACTGATCACGCCCATCAATC 58.041 50.000 0.00 0.00 29.74 2.67
254 255 2.425143 AACTGATCACGCCCATCAAT 57.575 45.000 0.00 0.00 29.74 2.57
255 256 2.499693 TCTAACTGATCACGCCCATCAA 59.500 45.455 0.00 0.00 29.74 2.57
256 257 2.107366 TCTAACTGATCACGCCCATCA 58.893 47.619 0.00 0.00 0.00 3.07
257 258 2.890808 TCTAACTGATCACGCCCATC 57.109 50.000 0.00 0.00 0.00 3.51
266 267 6.562653 CCCAAGGGGCAGATCTAACTGATC 62.563 54.167 0.00 0.00 43.08 2.92
267 268 2.441001 CCAAGGGGCAGATCTAACTGAT 59.559 50.000 0.00 0.00 39.94 2.90
268 269 1.839994 CCAAGGGGCAGATCTAACTGA 59.160 52.381 0.00 0.00 39.94 3.41
269 270 1.133976 CCCAAGGGGCAGATCTAACTG 60.134 57.143 0.00 0.00 35.35 3.16
270 271 1.216990 CCCAAGGGGCAGATCTAACT 58.783 55.000 0.00 0.00 35.35 2.24
271 272 3.808984 CCCAAGGGGCAGATCTAAC 57.191 57.895 0.00 0.00 35.35 2.34
282 283 5.022787 TCCAATATCAAAAAGACCCAAGGG 58.977 41.667 2.91 2.91 42.03 3.95
283 284 6.796785 ATCCAATATCAAAAAGACCCAAGG 57.203 37.500 0.00 0.00 0.00 3.61
284 285 9.506018 AAAAATCCAATATCAAAAAGACCCAAG 57.494 29.630 0.00 0.00 0.00 3.61
287 288 9.098355 GCTAAAAATCCAATATCAAAAAGACCC 57.902 33.333 0.00 0.00 0.00 4.46
288 289 9.651913 TGCTAAAAATCCAATATCAAAAAGACC 57.348 29.630 0.00 0.00 0.00 3.85
389 390 4.257731 GGTCAAAAAGCCTGGTTCAAAAA 58.742 39.130 0.00 0.00 0.00 1.94
390 391 3.369997 GGGTCAAAAAGCCTGGTTCAAAA 60.370 43.478 0.00 0.00 42.62 2.44
391 392 2.169561 GGGTCAAAAAGCCTGGTTCAAA 59.830 45.455 0.00 0.00 42.62 2.69
392 393 1.760029 GGGTCAAAAAGCCTGGTTCAA 59.240 47.619 0.00 0.00 42.62 2.69
393 394 1.408969 GGGTCAAAAAGCCTGGTTCA 58.591 50.000 0.00 0.00 42.62 3.18
394 395 0.679505 GGGGTCAAAAAGCCTGGTTC 59.320 55.000 0.00 0.00 45.42 3.62
395 396 0.264657 AGGGGTCAAAAAGCCTGGTT 59.735 50.000 0.00 0.00 45.42 3.67
396 397 0.264657 AAGGGGTCAAAAAGCCTGGT 59.735 50.000 0.00 0.00 45.42 4.00
397 398 1.344438 GAAAGGGGTCAAAAAGCCTGG 59.656 52.381 0.00 0.00 45.42 4.45
398 399 1.344438 GGAAAGGGGTCAAAAAGCCTG 59.656 52.381 0.00 0.00 45.42 4.85
399 400 1.062505 TGGAAAGGGGTCAAAAAGCCT 60.063 47.619 0.00 0.00 45.42 4.58
400 401 1.419381 TGGAAAGGGGTCAAAAAGCC 58.581 50.000 0.00 0.00 45.37 4.35
401 402 3.402110 CAATGGAAAGGGGTCAAAAAGC 58.598 45.455 0.00 0.00 0.00 3.51
402 403 3.181456 TGCAATGGAAAGGGGTCAAAAAG 60.181 43.478 0.00 0.00 0.00 2.27
403 404 2.774234 TGCAATGGAAAGGGGTCAAAAA 59.226 40.909 0.00 0.00 0.00 1.94
404 405 2.402564 TGCAATGGAAAGGGGTCAAAA 58.597 42.857 0.00 0.00 0.00 2.44
405 406 2.094100 TGCAATGGAAAGGGGTCAAA 57.906 45.000 0.00 0.00 0.00 2.69
406 407 2.178580 GATGCAATGGAAAGGGGTCAA 58.821 47.619 0.00 0.00 0.00 3.18
407 408 1.851304 GATGCAATGGAAAGGGGTCA 58.149 50.000 0.00 0.00 0.00 4.02
408 409 0.740737 CGATGCAATGGAAAGGGGTC 59.259 55.000 0.00 0.00 0.00 4.46
409 410 0.331278 TCGATGCAATGGAAAGGGGT 59.669 50.000 0.00 0.00 0.00 4.95
410 411 1.134946 GTTCGATGCAATGGAAAGGGG 59.865 52.381 0.00 0.00 42.73 4.79
411 412 1.202177 CGTTCGATGCAATGGAAAGGG 60.202 52.381 0.00 0.00 42.73 3.95
412 413 2.178474 CGTTCGATGCAATGGAAAGG 57.822 50.000 0.00 0.00 42.73 3.11
413 414 1.737236 TCCGTTCGATGCAATGGAAAG 59.263 47.619 0.00 0.00 42.73 2.62
414 415 1.814793 TCCGTTCGATGCAATGGAAA 58.185 45.000 0.00 0.00 42.73 3.13
415 416 1.814793 TTCCGTTCGATGCAATGGAA 58.185 45.000 5.81 5.81 45.43 3.53
416 417 1.814793 TTTCCGTTCGATGCAATGGA 58.185 45.000 0.00 0.00 39.33 3.41
417 418 2.849880 ATTTCCGTTCGATGCAATGG 57.150 45.000 0.00 0.00 34.12 3.16
418 419 4.271590 TGTATTTCCGTTCGATGCAATG 57.728 40.909 0.00 0.00 0.00 2.82
419 420 4.155099 TGTTGTATTTCCGTTCGATGCAAT 59.845 37.500 0.00 0.00 30.26 3.56
420 421 3.498777 TGTTGTATTTCCGTTCGATGCAA 59.501 39.130 0.00 0.00 0.00 4.08
421 422 3.067833 TGTTGTATTTCCGTTCGATGCA 58.932 40.909 0.00 0.00 0.00 3.96
422 423 3.124636 ACTGTTGTATTTCCGTTCGATGC 59.875 43.478 0.00 0.00 0.00 3.91
423 424 4.201685 GGACTGTTGTATTTCCGTTCGATG 60.202 45.833 0.00 0.00 0.00 3.84
424 425 3.930848 GGACTGTTGTATTTCCGTTCGAT 59.069 43.478 0.00 0.00 0.00 3.59
425 426 3.319755 GGACTGTTGTATTTCCGTTCGA 58.680 45.455 0.00 0.00 0.00 3.71
426 427 2.414138 GGGACTGTTGTATTTCCGTTCG 59.586 50.000 0.00 0.00 0.00 3.95
427 428 3.404899 TGGGACTGTTGTATTTCCGTTC 58.595 45.455 0.00 0.00 0.00 3.95
428 429 3.071892 TCTGGGACTGTTGTATTTCCGTT 59.928 43.478 0.00 0.00 0.00 4.44
429 430 2.635915 TCTGGGACTGTTGTATTTCCGT 59.364 45.455 0.00 0.00 0.00 4.69
430 431 3.328382 TCTGGGACTGTTGTATTTCCG 57.672 47.619 0.00 0.00 0.00 4.30
431 432 4.825085 TGTTTCTGGGACTGTTGTATTTCC 59.175 41.667 0.00 0.00 0.00 3.13
432 433 6.016276 ACATGTTTCTGGGACTGTTGTATTTC 60.016 38.462 0.00 0.00 0.00 2.17
433 434 5.833131 ACATGTTTCTGGGACTGTTGTATTT 59.167 36.000 0.00 0.00 0.00 1.40
434 435 5.385198 ACATGTTTCTGGGACTGTTGTATT 58.615 37.500 0.00 0.00 0.00 1.89
435 436 4.985538 ACATGTTTCTGGGACTGTTGTAT 58.014 39.130 0.00 0.00 0.00 2.29
436 437 4.431416 ACATGTTTCTGGGACTGTTGTA 57.569 40.909 0.00 0.00 0.00 2.41
437 438 3.297134 ACATGTTTCTGGGACTGTTGT 57.703 42.857 0.00 0.00 0.00 3.32
438 439 3.631686 TGAACATGTTTCTGGGACTGTTG 59.368 43.478 13.36 0.00 0.00 3.33
439 440 3.885297 CTGAACATGTTTCTGGGACTGTT 59.115 43.478 13.36 0.00 0.00 3.16
440 441 3.136443 TCTGAACATGTTTCTGGGACTGT 59.864 43.478 13.36 0.00 0.00 3.55
441 442 3.743521 TCTGAACATGTTTCTGGGACTG 58.256 45.455 13.36 2.44 0.00 3.51
442 443 4.392940 CTTCTGAACATGTTTCTGGGACT 58.607 43.478 13.36 0.00 0.00 3.85
443 444 3.503748 CCTTCTGAACATGTTTCTGGGAC 59.496 47.826 13.36 0.00 0.00 4.46
444 445 3.394274 TCCTTCTGAACATGTTTCTGGGA 59.606 43.478 13.36 13.38 0.00 4.37
445 446 3.754965 TCCTTCTGAACATGTTTCTGGG 58.245 45.455 13.36 11.44 0.00 4.45
446 447 5.278660 CCTTTCCTTCTGAACATGTTTCTGG 60.279 44.000 13.36 10.83 31.05 3.86
447 448 5.532406 TCCTTTCCTTCTGAACATGTTTCTG 59.468 40.000 13.36 9.90 31.05 3.02
448 449 5.694995 TCCTTTCCTTCTGAACATGTTTCT 58.305 37.500 13.36 0.00 31.05 2.52
449 450 6.391227 TTCCTTTCCTTCTGAACATGTTTC 57.609 37.500 13.36 6.80 31.05 2.78
450 451 6.790232 TTTCCTTTCCTTCTGAACATGTTT 57.210 33.333 13.36 0.00 31.05 2.83
451 452 6.183360 CCTTTTCCTTTCCTTCTGAACATGTT 60.183 38.462 11.78 11.78 31.05 2.71
452 453 5.302823 CCTTTTCCTTTCCTTCTGAACATGT 59.697 40.000 0.00 0.00 31.05 3.21
453 454 5.536161 TCCTTTTCCTTTCCTTCTGAACATG 59.464 40.000 0.00 0.00 31.05 3.21
454 455 5.705400 TCCTTTTCCTTTCCTTCTGAACAT 58.295 37.500 0.00 0.00 31.05 2.71
455 456 5.124036 TCCTTTTCCTTTCCTTCTGAACA 57.876 39.130 0.00 0.00 31.05 3.18
456 457 6.465439 TTTCCTTTTCCTTTCCTTCTGAAC 57.535 37.500 0.00 0.00 31.05 3.18
457 458 6.667848 ACTTTTCCTTTTCCTTTCCTTCTGAA 59.332 34.615 0.00 0.00 0.00 3.02
458 459 6.194967 ACTTTTCCTTTTCCTTTCCTTCTGA 58.805 36.000 0.00 0.00 0.00 3.27
459 460 6.471233 ACTTTTCCTTTTCCTTTCCTTCTG 57.529 37.500 0.00 0.00 0.00 3.02
460 461 7.038302 ACAAACTTTTCCTTTTCCTTTCCTTCT 60.038 33.333 0.00 0.00 0.00 2.85
461 462 7.103641 ACAAACTTTTCCTTTTCCTTTCCTTC 58.896 34.615 0.00 0.00 0.00 3.46
462 463 7.016153 ACAAACTTTTCCTTTTCCTTTCCTT 57.984 32.000 0.00 0.00 0.00 3.36
463 464 6.620877 ACAAACTTTTCCTTTTCCTTTCCT 57.379 33.333 0.00 0.00 0.00 3.36
464 465 7.011109 GCTAACAAACTTTTCCTTTTCCTTTCC 59.989 37.037 0.00 0.00 0.00 3.13
465 466 7.764443 AGCTAACAAACTTTTCCTTTTCCTTTC 59.236 33.333 0.00 0.00 0.00 2.62
466 467 7.620880 AGCTAACAAACTTTTCCTTTTCCTTT 58.379 30.769 0.00 0.00 0.00 3.11
467 468 7.182817 AGCTAACAAACTTTTCCTTTTCCTT 57.817 32.000 0.00 0.00 0.00 3.36
468 469 6.791867 AGCTAACAAACTTTTCCTTTTCCT 57.208 33.333 0.00 0.00 0.00 3.36
469 470 7.265673 AGAAGCTAACAAACTTTTCCTTTTCC 58.734 34.615 0.00 0.00 0.00 3.13
470 471 9.797556 TTAGAAGCTAACAAACTTTTCCTTTTC 57.202 29.630 0.00 0.00 0.00 2.29
498 499 8.907885 AGAAGCTAACAAACTCTTCATCTTTTT 58.092 29.630 0.00 0.00 37.86 1.94
499 500 8.457238 AGAAGCTAACAAACTCTTCATCTTTT 57.543 30.769 0.00 0.00 37.86 2.27
500 501 8.994170 GTAGAAGCTAACAAACTCTTCATCTTT 58.006 33.333 0.00 0.00 37.86 2.52
501 502 8.150945 TGTAGAAGCTAACAAACTCTTCATCTT 58.849 33.333 0.00 0.00 37.86 2.40
502 503 7.671302 TGTAGAAGCTAACAAACTCTTCATCT 58.329 34.615 0.00 0.00 37.86 2.90
503 504 7.891183 TGTAGAAGCTAACAAACTCTTCATC 57.109 36.000 0.00 0.00 37.86 2.92
504 505 8.150945 TCTTGTAGAAGCTAACAAACTCTTCAT 58.849 33.333 9.63 0.00 37.86 2.57
505 506 7.497595 TCTTGTAGAAGCTAACAAACTCTTCA 58.502 34.615 9.63 0.00 37.86 3.02
506 507 7.948278 TCTTGTAGAAGCTAACAAACTCTTC 57.052 36.000 9.63 0.00 35.32 2.87
507 508 8.613482 GTTTCTTGTAGAAGCTAACAAACTCTT 58.387 33.333 9.63 0.00 35.37 2.85
508 509 7.226918 GGTTTCTTGTAGAAGCTAACAAACTCT 59.773 37.037 14.76 0.00 35.99 3.24
509 510 7.226918 AGGTTTCTTGTAGAAGCTAACAAACTC 59.773 37.037 14.76 6.85 35.99 3.01
510 511 7.054751 AGGTTTCTTGTAGAAGCTAACAAACT 58.945 34.615 14.76 5.19 35.99 2.66
511 512 7.260558 AGGTTTCTTGTAGAAGCTAACAAAC 57.739 36.000 14.76 10.53 35.99 2.93
516 517 9.832445 CCATTATAGGTTTCTTGTAGAAGCTAA 57.168 33.333 0.00 0.00 35.99 3.09
517 518 8.429641 CCCATTATAGGTTTCTTGTAGAAGCTA 58.570 37.037 0.00 0.00 35.99 3.32
518 519 7.283329 CCCATTATAGGTTTCTTGTAGAAGCT 58.717 38.462 0.00 0.00 35.99 3.74
519 520 6.017026 GCCCATTATAGGTTTCTTGTAGAAGC 60.017 42.308 0.00 0.00 35.37 3.86
520 521 6.486993 GGCCCATTATAGGTTTCTTGTAGAAG 59.513 42.308 0.00 0.00 35.37 2.85
521 522 6.362248 GGCCCATTATAGGTTTCTTGTAGAA 58.638 40.000 0.00 0.00 31.28 2.10
522 523 5.454187 CGGCCCATTATAGGTTTCTTGTAGA 60.454 44.000 0.00 0.00 0.00 2.59
523 524 4.755123 CGGCCCATTATAGGTTTCTTGTAG 59.245 45.833 0.00 0.00 0.00 2.74
524 525 4.409574 TCGGCCCATTATAGGTTTCTTGTA 59.590 41.667 0.00 0.00 0.00 2.41
525 526 3.201266 TCGGCCCATTATAGGTTTCTTGT 59.799 43.478 0.00 0.00 0.00 3.16
526 527 3.815401 CTCGGCCCATTATAGGTTTCTTG 59.185 47.826 0.00 0.00 0.00 3.02
527 528 3.747708 GCTCGGCCCATTATAGGTTTCTT 60.748 47.826 0.00 0.00 0.00 2.52
528 529 2.224548 GCTCGGCCCATTATAGGTTTCT 60.225 50.000 0.00 0.00 0.00 2.52
529 530 2.152016 GCTCGGCCCATTATAGGTTTC 58.848 52.381 0.00 0.00 0.00 2.78
530 531 1.774856 AGCTCGGCCCATTATAGGTTT 59.225 47.619 0.00 0.00 0.00 3.27
531 532 1.435256 AGCTCGGCCCATTATAGGTT 58.565 50.000 0.00 0.00 0.00 3.50
532 533 2.320681 TAGCTCGGCCCATTATAGGT 57.679 50.000 0.00 0.00 0.00 3.08
533 534 2.743183 GCATAGCTCGGCCCATTATAGG 60.743 54.545 0.00 0.00 0.00 2.57
534 535 2.555199 GCATAGCTCGGCCCATTATAG 58.445 52.381 0.00 0.00 0.00 1.31
535 536 1.134818 CGCATAGCTCGGCCCATTATA 60.135 52.381 0.00 0.00 0.00 0.98
536 537 0.391661 CGCATAGCTCGGCCCATTAT 60.392 55.000 0.00 0.00 0.00 1.28
537 538 1.005037 CGCATAGCTCGGCCCATTA 60.005 57.895 0.00 0.00 0.00 1.90
538 539 2.281070 CGCATAGCTCGGCCCATT 60.281 61.111 0.00 0.00 0.00 3.16
539 540 3.231889 CTCGCATAGCTCGGCCCAT 62.232 63.158 0.00 0.00 0.00 4.00
540 541 3.916544 CTCGCATAGCTCGGCCCA 61.917 66.667 0.00 0.00 0.00 5.36
549 550 1.789464 GGATCGTCAAAGCTCGCATAG 59.211 52.381 0.00 0.00 0.00 2.23
550 551 1.136110 TGGATCGTCAAAGCTCGCATA 59.864 47.619 0.00 0.00 0.00 3.14
551 552 0.108186 TGGATCGTCAAAGCTCGCAT 60.108 50.000 0.00 0.00 0.00 4.73
552 553 0.320334 TTGGATCGTCAAAGCTCGCA 60.320 50.000 0.00 0.00 0.00 5.10
553 554 1.004504 GATTGGATCGTCAAAGCTCGC 60.005 52.381 0.00 0.00 0.00 5.03
565 566 2.203070 ACGGCCTGCGATTGGATC 60.203 61.111 0.00 0.00 0.00 3.36
566 567 2.203070 GACGGCCTGCGATTGGAT 60.203 61.111 0.00 0.00 0.00 3.41
567 568 4.812476 CGACGGCCTGCGATTGGA 62.812 66.667 8.24 0.00 0.00 3.53
569 570 3.554692 GACGACGGCCTGCGATTG 61.555 66.667 19.12 0.00 0.00 2.67
570 571 4.814294 GGACGACGGCCTGCGATT 62.814 66.667 14.07 0.00 0.00 3.34
573 574 3.426117 AATAGGACGACGGCCTGCG 62.426 63.158 32.89 11.90 36.96 5.18
574 575 1.591863 GAATAGGACGACGGCCTGC 60.592 63.158 32.89 17.21 36.96 4.85
575 576 0.527817 GTGAATAGGACGACGGCCTG 60.528 60.000 32.89 0.00 36.96 4.85
576 577 1.673808 GGTGAATAGGACGACGGCCT 61.674 60.000 28.46 28.46 39.56 5.19
577 578 1.227176 GGTGAATAGGACGACGGCC 60.227 63.158 13.34 13.34 0.00 6.13
578 579 1.227176 GGGTGAATAGGACGACGGC 60.227 63.158 0.00 0.00 0.00 5.68
579 580 1.440476 GGGGTGAATAGGACGACGG 59.560 63.158 0.00 0.00 0.00 4.79
580 581 1.065273 CGGGGTGAATAGGACGACG 59.935 63.158 0.00 0.00 0.00 5.12
581 582 0.384669 CTCGGGGTGAATAGGACGAC 59.615 60.000 0.00 0.00 0.00 4.34
582 583 1.389609 GCTCGGGGTGAATAGGACGA 61.390 60.000 0.00 0.00 0.00 4.20
583 584 1.067582 GCTCGGGGTGAATAGGACG 59.932 63.158 0.00 0.00 0.00 4.79
584 585 1.446366 GGCTCGGGGTGAATAGGAC 59.554 63.158 0.00 0.00 0.00 3.85
585 586 1.764854 GGGCTCGGGGTGAATAGGA 60.765 63.158 0.00 0.00 0.00 2.94
586 587 2.044806 CTGGGCTCGGGGTGAATAGG 62.045 65.000 0.00 0.00 0.00 2.57
587 588 1.447643 CTGGGCTCGGGGTGAATAG 59.552 63.158 0.00 0.00 0.00 1.73
588 589 2.742116 GCTGGGCTCGGGGTGAATA 61.742 63.158 0.00 0.00 0.00 1.75
589 590 4.115199 GCTGGGCTCGGGGTGAAT 62.115 66.667 0.00 0.00 0.00 2.57
595 596 4.351054 AGTTTGGCTGGGCTCGGG 62.351 66.667 0.00 0.00 0.00 5.14
596 597 1.899437 TAGAGTTTGGCTGGGCTCGG 61.899 60.000 0.00 0.00 33.57 4.63
597 598 0.741221 GTAGAGTTTGGCTGGGCTCG 60.741 60.000 0.00 0.00 33.57 5.03
598 599 0.324943 TGTAGAGTTTGGCTGGGCTC 59.675 55.000 0.00 0.00 0.00 4.70
599 600 0.995024 ATGTAGAGTTTGGCTGGGCT 59.005 50.000 0.00 0.00 0.00 5.19
600 601 1.839424 AATGTAGAGTTTGGCTGGGC 58.161 50.000 0.00 0.00 0.00 5.36
601 602 5.041191 AGATAATGTAGAGTTTGGCTGGG 57.959 43.478 0.00 0.00 0.00 4.45
602 603 5.059833 GGAGATAATGTAGAGTTTGGCTGG 58.940 45.833 0.00 0.00 0.00 4.85
603 604 5.674525 TGGAGATAATGTAGAGTTTGGCTG 58.325 41.667 0.00 0.00 0.00 4.85
604 605 5.663106 TCTGGAGATAATGTAGAGTTTGGCT 59.337 40.000 0.00 0.00 0.00 4.75
605 606 5.755861 GTCTGGAGATAATGTAGAGTTTGGC 59.244 44.000 0.00 0.00 0.00 4.52
606 607 6.284459 GGTCTGGAGATAATGTAGAGTTTGG 58.716 44.000 0.00 0.00 0.00 3.28
607 608 6.284459 GGGTCTGGAGATAATGTAGAGTTTG 58.716 44.000 0.00 0.00 0.00 2.93
608 609 5.069251 CGGGTCTGGAGATAATGTAGAGTTT 59.931 44.000 0.00 0.00 0.00 2.66
609 610 4.585162 CGGGTCTGGAGATAATGTAGAGTT 59.415 45.833 0.00 0.00 0.00 3.01
610 611 4.145807 CGGGTCTGGAGATAATGTAGAGT 58.854 47.826 0.00 0.00 0.00 3.24
611 612 3.508012 CCGGGTCTGGAGATAATGTAGAG 59.492 52.174 0.00 0.00 0.00 2.43
612 613 3.497332 CCGGGTCTGGAGATAATGTAGA 58.503 50.000 0.00 0.00 0.00 2.59
613 614 2.028930 GCCGGGTCTGGAGATAATGTAG 60.029 54.545 2.18 0.00 0.00 2.74
614 615 1.968493 GCCGGGTCTGGAGATAATGTA 59.032 52.381 2.18 0.00 0.00 2.29
615 616 0.759346 GCCGGGTCTGGAGATAATGT 59.241 55.000 2.18 0.00 0.00 2.71
616 617 0.035458 GGCCGGGTCTGGAGATAATG 59.965 60.000 2.18 0.00 0.00 1.90
617 618 1.472662 CGGCCGGGTCTGGAGATAAT 61.473 60.000 20.10 0.00 0.00 1.28
618 619 2.131709 CGGCCGGGTCTGGAGATAA 61.132 63.158 20.10 0.00 0.00 1.75
619 620 2.520982 CGGCCGGGTCTGGAGATA 60.521 66.667 20.10 0.00 0.00 1.98
620 621 4.779733 ACGGCCGGGTCTGGAGAT 62.780 66.667 31.76 0.00 0.00 2.75
640 641 2.616330 TTGAAGCTTTGCCGAGGCG 61.616 57.895 9.78 0.00 45.51 5.52
641 642 1.081175 GTTGAAGCTTTGCCGAGGC 60.081 57.895 7.26 7.26 42.35 4.70
642 643 0.890996 AGGTTGAAGCTTTGCCGAGG 60.891 55.000 0.00 0.00 0.00 4.63
643 644 0.954452 AAGGTTGAAGCTTTGCCGAG 59.046 50.000 3.44 0.00 30.79 4.63
644 645 1.398692 AAAGGTTGAAGCTTTGCCGA 58.601 45.000 20.13 0.00 43.44 5.54
645 646 3.965780 AAAGGTTGAAGCTTTGCCG 57.034 47.368 20.13 0.00 43.44 5.69
649 650 5.418840 TCTTTGAGACAAAGGTTGAAGCTTT 59.581 36.000 15.84 15.84 45.69 3.51
650 651 4.949856 TCTTTGAGACAAAGGTTGAAGCTT 59.050 37.500 19.43 3.44 37.57 3.74
651 652 4.526970 TCTTTGAGACAAAGGTTGAAGCT 58.473 39.130 19.43 0.00 0.00 3.74
652 653 4.900635 TCTTTGAGACAAAGGTTGAAGC 57.099 40.909 19.43 0.00 0.00 3.86
677 678 2.093711 ACGGTTGAAGCTTTGCCTTTTT 60.094 40.909 0.00 0.00 0.00 1.94
678 679 1.480545 ACGGTTGAAGCTTTGCCTTTT 59.519 42.857 0.00 0.00 0.00 2.27
679 680 1.111277 ACGGTTGAAGCTTTGCCTTT 58.889 45.000 0.00 0.00 0.00 3.11
680 681 1.607148 GTACGGTTGAAGCTTTGCCTT 59.393 47.619 0.00 0.00 0.00 4.35
681 682 1.235724 GTACGGTTGAAGCTTTGCCT 58.764 50.000 0.00 0.00 0.00 4.75
682 683 0.240145 GGTACGGTTGAAGCTTTGCC 59.760 55.000 0.00 2.54 0.00 4.52
683 684 3.767287 GGTACGGTTGAAGCTTTGC 57.233 52.632 0.00 0.00 0.00 3.68
697 698 3.361414 GAAAGCGAGACAGATACGGTAC 58.639 50.000 0.00 0.00 36.78 3.34
698 699 2.357009 GGAAAGCGAGACAGATACGGTA 59.643 50.000 0.00 0.00 36.78 4.02
703 704 4.021456 TGTTCAAGGAAAGCGAGACAGATA 60.021 41.667 0.00 0.00 0.00 1.98
714 715 5.174395 AGATCGATCTGTGTTCAAGGAAAG 58.826 41.667 26.78 0.00 35.42 2.62
717 718 4.950475 AGTAGATCGATCTGTGTTCAAGGA 59.050 41.667 33.22 10.31 37.76 3.36
721 722 6.147328 CCGTATAGTAGATCGATCTGTGTTCA 59.853 42.308 33.22 13.18 37.76 3.18
722 723 6.402334 CCCGTATAGTAGATCGATCTGTGTTC 60.402 46.154 33.22 18.73 37.76 3.18
723 724 5.411977 CCCGTATAGTAGATCGATCTGTGTT 59.588 44.000 33.22 19.17 37.76 3.32
724 725 4.936411 CCCGTATAGTAGATCGATCTGTGT 59.064 45.833 33.22 21.40 37.76 3.72
725 726 5.176592 TCCCGTATAGTAGATCGATCTGTG 58.823 45.833 33.22 16.04 37.76 3.66
729 730 6.074195 CGAATCTCCCGTATAGTAGATCGATC 60.074 46.154 17.91 17.91 0.00 3.69
738 739 0.879765 CGCCGAATCTCCCGTATAGT 59.120 55.000 0.00 0.00 0.00 2.12
753 754 3.349006 GGCTATGACATGCCGCCG 61.349 66.667 11.51 0.00 39.71 6.46
984 985 3.161450 ATCCACCGACGGGGATGG 61.161 66.667 26.60 21.18 42.24 3.51
1169 1176 0.748005 ATTGAGGACGCGAATTGGGG 60.748 55.000 15.93 2.89 34.15 4.96
1257 1264 3.609409 CGGCATGCTCTTGATCATTGATG 60.609 47.826 18.92 0.00 0.00 3.07
1316 1323 2.202690 TGAATAGTGCGACGGCGG 60.203 61.111 15.06 0.00 44.10 6.13
1336 1343 6.856938 GTGGTAGCAAGTATTATAGTCGACAG 59.143 42.308 19.50 0.00 0.00 3.51
1351 1358 1.268794 CCGATCTCTCGTGGTAGCAAG 60.269 57.143 0.00 0.00 43.49 4.01
1374 1381 1.303236 CCATGTTGCGACCCTCCAA 60.303 57.895 0.45 0.00 0.00 3.53
1380 1387 2.686816 CGGGTTCCATGTTGCGACC 61.687 63.158 0.45 0.00 0.00 4.79
1386 1393 3.334691 CATATATCGCGGGTTCCATGTT 58.665 45.455 6.13 0.00 0.00 2.71
2842 3037 1.247567 ACTGCTAAATGCCCACACAC 58.752 50.000 0.00 0.00 42.00 3.82
2843 3038 1.885887 GAACTGCTAAATGCCCACACA 59.114 47.619 0.00 0.00 42.00 3.72
2844 3039 1.135689 CGAACTGCTAAATGCCCACAC 60.136 52.381 0.00 0.00 42.00 3.82
2845 3040 1.164411 CGAACTGCTAAATGCCCACA 58.836 50.000 0.00 0.00 42.00 4.17
2846 3041 0.179163 GCGAACTGCTAAATGCCCAC 60.179 55.000 0.00 0.00 42.00 4.61
2847 3042 1.312371 GGCGAACTGCTAAATGCCCA 61.312 55.000 0.00 0.00 45.43 5.36
2848 3043 1.433471 GGCGAACTGCTAAATGCCC 59.567 57.895 0.00 0.00 45.43 5.36
2849 3044 1.312371 TGGGCGAACTGCTAAATGCC 61.312 55.000 0.00 1.88 45.43 4.40
2850 3045 0.179163 GTGGGCGAACTGCTAAATGC 60.179 55.000 0.00 0.00 45.43 3.56
2851 3046 1.135689 GTGTGGGCGAACTGCTAAATG 60.136 52.381 0.00 0.00 45.43 2.32
2852 3047 1.165270 GTGTGGGCGAACTGCTAAAT 58.835 50.000 0.00 0.00 45.43 1.40
2853 3048 0.179043 TGTGTGGGCGAACTGCTAAA 60.179 50.000 0.00 0.00 45.43 1.85
2854 3049 0.882927 GTGTGTGGGCGAACTGCTAA 60.883 55.000 0.00 0.00 45.43 3.09
2855 3050 1.301401 GTGTGTGGGCGAACTGCTA 60.301 57.895 0.00 0.00 45.43 3.49
2856 3051 2.591715 GTGTGTGGGCGAACTGCT 60.592 61.111 0.00 0.00 45.43 4.24
2857 3052 3.660111 GGTGTGTGGGCGAACTGC 61.660 66.667 0.00 0.00 45.38 4.40
2858 3053 2.203139 TGGTGTGTGGGCGAACTG 60.203 61.111 0.00 0.00 0.00 3.16
2859 3054 2.111043 CTGGTGTGTGGGCGAACT 59.889 61.111 0.00 0.00 0.00 3.01
2860 3055 1.381165 AAACTGGTGTGTGGGCGAAC 61.381 55.000 0.00 0.00 0.00 3.95
2861 3056 0.681564 AAAACTGGTGTGTGGGCGAA 60.682 50.000 0.00 0.00 0.00 4.70
2862 3057 1.077357 AAAACTGGTGTGTGGGCGA 60.077 52.632 0.00 0.00 0.00 5.54
2863 3058 1.358759 GAAAACTGGTGTGTGGGCG 59.641 57.895 0.00 0.00 0.00 6.13
2864 3059 0.385390 CTGAAAACTGGTGTGTGGGC 59.615 55.000 0.00 0.00 0.00 5.36
2865 3060 1.676006 GACTGAAAACTGGTGTGTGGG 59.324 52.381 0.00 0.00 0.00 4.61
2866 3061 2.097466 GTGACTGAAAACTGGTGTGTGG 59.903 50.000 0.00 0.00 0.00 4.17
2867 3062 2.223021 CGTGACTGAAAACTGGTGTGTG 60.223 50.000 0.00 0.00 0.00 3.82
2868 3063 2.006888 CGTGACTGAAAACTGGTGTGT 58.993 47.619 0.00 0.00 0.00 3.72
2869 3064 1.268032 GCGTGACTGAAAACTGGTGTG 60.268 52.381 0.00 0.00 0.00 3.82
2870 3065 1.014352 GCGTGACTGAAAACTGGTGT 58.986 50.000 0.00 0.00 0.00 4.16
2871 3066 1.013596 TGCGTGACTGAAAACTGGTG 58.986 50.000 0.00 0.00 0.00 4.17
2872 3067 1.014352 GTGCGTGACTGAAAACTGGT 58.986 50.000 0.00 0.00 0.00 4.00
2873 3068 1.013596 TGTGCGTGACTGAAAACTGG 58.986 50.000 0.00 0.00 0.00 4.00
2874 3069 2.539547 CCTTGTGCGTGACTGAAAACTG 60.540 50.000 0.00 0.00 0.00 3.16
2875 3070 1.670811 CCTTGTGCGTGACTGAAAACT 59.329 47.619 0.00 0.00 0.00 2.66
2876 3071 1.268539 CCCTTGTGCGTGACTGAAAAC 60.269 52.381 0.00 0.00 0.00 2.43
2877 3072 1.021202 CCCTTGTGCGTGACTGAAAA 58.979 50.000 0.00 0.00 0.00 2.29
2878 3073 1.444119 GCCCTTGTGCGTGACTGAAA 61.444 55.000 0.00 0.00 0.00 2.69
2879 3074 1.891919 GCCCTTGTGCGTGACTGAA 60.892 57.895 0.00 0.00 0.00 3.02
2880 3075 2.280797 GCCCTTGTGCGTGACTGA 60.281 61.111 0.00 0.00 0.00 3.41
2881 3076 2.281070 AGCCCTTGTGCGTGACTG 60.281 61.111 0.00 0.00 36.02 3.51
2882 3077 2.281070 CAGCCCTTGTGCGTGACT 60.281 61.111 0.00 0.00 36.02 3.41
2883 3078 3.357079 CCAGCCCTTGTGCGTGAC 61.357 66.667 0.00 0.00 36.02 3.67
2884 3079 3.872603 ACCAGCCCTTGTGCGTGA 61.873 61.111 0.00 0.00 36.02 4.35
2885 3080 3.663176 CACCAGCCCTTGTGCGTG 61.663 66.667 0.00 0.00 36.02 5.34
2886 3081 4.189580 ACACCAGCCCTTGTGCGT 62.190 61.111 0.00 0.00 35.90 5.24
2887 3082 3.663176 CACACCAGCCCTTGTGCG 61.663 66.667 0.00 0.00 36.95 5.34
2888 3083 2.519302 ACACACCAGCCCTTGTGC 60.519 61.111 8.66 0.00 45.92 4.57
2890 3085 2.195683 CCACACACCAGCCCTTGT 59.804 61.111 0.00 0.00 0.00 3.16
2891 3086 2.598394 CCCACACACCAGCCCTTG 60.598 66.667 0.00 0.00 0.00 3.61
2892 3087 4.603535 GCCCACACACCAGCCCTT 62.604 66.667 0.00 0.00 0.00 3.95
2896 3091 3.216292 AAACGCCCACACACCAGC 61.216 61.111 0.00 0.00 0.00 4.85
2897 3092 2.721231 CAAACGCCCACACACCAG 59.279 61.111 0.00 0.00 0.00 4.00
2898 3093 3.522731 GCAAACGCCCACACACCA 61.523 61.111 0.00 0.00 0.00 4.17
2899 3094 4.279043 GGCAAACGCCCACACACC 62.279 66.667 0.00 0.00 44.46 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.