Multiple sequence alignment - TraesCS2A01G443100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G443100 chr2A 100.000 5547 0 0 1 5547 693230203 693235749 0.000000e+00 10244.0
1 TraesCS2A01G443100 chr2A 98.494 332 5 0 3160 3491 1503973 1504304 2.230000e-163 586.0
2 TraesCS2A01G443100 chr2A 97.256 328 9 0 3162 3489 200415903 200415576 1.750000e-154 556.0
3 TraesCS2A01G443100 chr2A 97.256 328 9 0 3162 3489 230805941 230805614 1.750000e-154 556.0
4 TraesCS2A01G443100 chr2A 96.636 327 11 0 3164 3490 141535501 141535827 1.360000e-150 544.0
5 TraesCS2A01G443100 chr2A 96.037 328 13 0 3162 3489 744619877 744619550 8.180000e-148 534.0
6 TraesCS2A01G443100 chr2A 88.889 162 15 3 2648 2806 758586577 758586738 4.380000e-46 196.0
7 TraesCS2A01G443100 chr2A 100.000 30 0 0 3460 3489 583601442 583601413 7.760000e-04 56.5
8 TraesCS2A01G443100 chr2D 94.259 2212 93 12 1 2190 552566142 552568341 0.000000e+00 3350.0
9 TraesCS2A01G443100 chr2D 91.291 1332 35 17 3489 4793 552569395 552570672 0.000000e+00 1742.0
10 TraesCS2A01G443100 chr2D 89.497 914 71 18 2215 3114 552568331 552569233 0.000000e+00 1133.0
11 TraesCS2A01G443100 chr2D 85.202 642 74 18 4918 5547 552571464 552572096 1.680000e-179 640.0
12 TraesCS2A01G443100 chr2B 93.806 1905 53 26 337 2219 658198167 658200028 0.000000e+00 2804.0
13 TraesCS2A01G443100 chr2B 91.481 1303 49 17 3490 4773 658200795 658202054 0.000000e+00 1735.0
14 TraesCS2A01G443100 chr2B 85.417 528 49 19 2642 3162 658200297 658200803 1.770000e-144 523.0
15 TraesCS2A01G443100 chr2B 90.592 287 15 6 2174 2453 658200016 658200297 2.440000e-98 370.0
16 TraesCS2A01G443100 chr3A 97.959 343 5 2 3156 3497 12175706 12175365 1.330000e-165 593.0
17 TraesCS2A01G443100 chr3A 94.627 335 15 1 3159 3490 743673355 743673689 2.960000e-142 516.0
18 TraesCS2A01G443100 chr5A 98.198 333 4 2 3158 3489 680837253 680837584 1.040000e-161 580.0
19 TraesCS2A01G443100 chr5A 98.680 303 3 1 3163 3465 368127705 368127404 2.270000e-148 536.0
20 TraesCS2A01G443100 chr5A 84.270 178 22 5 2639 2813 696934821 696934995 9.560000e-38 169.0
21 TraesCS2A01G443100 chr4A 84.524 252 31 8 4914 5161 109429508 109429755 5.550000e-60 243.0
22 TraesCS2A01G443100 chr4D 89.222 167 15 3 2648 2811 465125471 465125305 7.280000e-49 206.0
23 TraesCS2A01G443100 chr5D 88.272 162 16 3 2648 2806 150835568 150835729 2.040000e-44 191.0
24 TraesCS2A01G443100 chr6A 87.654 162 18 2 2648 2807 371331099 371331260 2.640000e-43 187.0
25 TraesCS2A01G443100 chr6D 86.982 169 17 5 2644 2809 29378340 29378174 9.490000e-43 185.0
26 TraesCS2A01G443100 chr6D 86.957 161 17 4 2650 2807 287890206 287890365 1.590000e-40 178.0
27 TraesCS2A01G443100 chr1A 86.667 165 18 4 2647 2807 570252305 570252469 4.410000e-41 180.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G443100 chr2A 693230203 693235749 5546 False 10244.00 10244 100.00000 1 5547 1 chr2A.!!$F3 5546
1 TraesCS2A01G443100 chr2D 552566142 552572096 5954 False 1716.25 3350 90.06225 1 5547 4 chr2D.!!$F1 5546
2 TraesCS2A01G443100 chr2B 658198167 658202054 3887 False 1358.00 2804 90.32400 337 4773 4 chr2B.!!$F1 4436


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
947 962 1.006922 GCAAAGGCAGAACACCAGC 60.007 57.895 0.0 0.0 40.72 4.85 F
1913 1940 2.368875 AGTCTCCAACCAAGGTACACAG 59.631 50.000 0.0 0.0 0.00 3.66 F
2849 2923 0.029700 GGTTGCACCGTAGCGTTTTT 59.970 50.000 0.0 0.0 37.31 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2446 2515 0.605589 AAGCACAAACTAGCCGGGTC 60.606 55.0 10.79 0.00 0.00 4.46 R
3435 3633 0.037605 ACCGTGCTACAGTGTTAGGC 60.038 55.0 0.00 4.87 0.00 3.93 R
4820 5061 0.470341 TGGTGGAACGTGTTGATGGA 59.530 50.0 0.00 0.00 38.12 3.41 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.719676 AGGAAGGAAAGGGAAGAAGGT 58.280 47.619 0.00 0.00 0.00 3.50
35 36 6.275692 AGGAAAGGGAAGAAGGTAAGAAAA 57.724 37.500 0.00 0.00 0.00 2.29
38 39 5.984695 AAGGGAAGAAGGTAAGAAAATGC 57.015 39.130 0.00 0.00 0.00 3.56
52 53 1.780503 AAATGCCAAGGGACCTATGC 58.219 50.000 5.38 5.38 0.00 3.14
67 68 3.057548 TGCGGTGGCTGCAATCAG 61.058 61.111 0.50 0.00 43.23 2.90
98 99 4.448395 TGTGTTGTTCTTATCGGGTTAACG 59.552 41.667 0.00 0.00 0.00 3.18
118 119 2.716217 GGGTGAGTTTTCTGCATAGCT 58.284 47.619 0.00 0.00 0.00 3.32
130 131 4.136796 TCTGCATAGCTCAAGTTGTGTTT 58.863 39.130 2.11 0.00 0.00 2.83
132 133 4.609947 TGCATAGCTCAAGTTGTGTTTTG 58.390 39.130 2.11 5.45 0.00 2.44
137 138 2.738321 GCTCAAGTTGTGTTTTGGTGGG 60.738 50.000 2.11 0.00 0.00 4.61
141 142 1.206849 AGTTGTGTTTTGGTGGGCTTG 59.793 47.619 0.00 0.00 0.00 4.01
168 169 1.448013 GTGCCAACCTAGCCGAGTC 60.448 63.158 0.00 0.00 0.00 3.36
187 188 3.775316 AGTCGGGATGTTCTGTAGGATTT 59.225 43.478 0.00 0.00 0.00 2.17
190 191 4.224147 TCGGGATGTTCTGTAGGATTTGAA 59.776 41.667 0.00 0.00 0.00 2.69
192 193 6.099125 TCGGGATGTTCTGTAGGATTTGAATA 59.901 38.462 0.00 0.00 0.00 1.75
194 195 7.445402 CGGGATGTTCTGTAGGATTTGAATAAT 59.555 37.037 0.00 0.00 0.00 1.28
206 207 8.149631 AGGATTTGAATAATTTGGATTGTGGT 57.850 30.769 0.00 0.00 0.00 4.16
208 209 9.883142 GGATTTGAATAATTTGGATTGTGGTTA 57.117 29.630 0.00 0.00 0.00 2.85
211 212 9.921637 TTTGAATAATTTGGATTGTGGTTAGTC 57.078 29.630 0.00 0.00 0.00 2.59
212 213 7.757526 TGAATAATTTGGATTGTGGTTAGTCG 58.242 34.615 0.00 0.00 0.00 4.18
213 214 7.608376 TGAATAATTTGGATTGTGGTTAGTCGA 59.392 33.333 0.00 0.00 0.00 4.20
223 225 6.627395 TTGTGGTTAGTCGATTTTGATTGT 57.373 33.333 0.00 0.00 0.00 2.71
226 228 6.148150 TGTGGTTAGTCGATTTTGATTGTACC 59.852 38.462 0.00 0.00 0.00 3.34
240 242 7.397892 TTGATTGTACCTCAGTTTTGTTTGA 57.602 32.000 0.00 0.00 0.00 2.69
242 244 5.570234 TTGTACCTCAGTTTTGTTTGACC 57.430 39.130 0.00 0.00 0.00 4.02
262 264 4.708177 ACCGTCTGATCATAAATCAAGGG 58.292 43.478 0.00 0.00 0.00 3.95
275 277 7.562454 TCATAAATCAAGGGCAGATCAGAATTT 59.438 33.333 0.00 0.00 0.00 1.82
285 287 5.415701 GGCAGATCAGAATTTGACAAACCTA 59.584 40.000 1.94 0.00 38.99 3.08
380 386 3.706086 ACCATGAAAAGGATAATGCCCAC 59.294 43.478 0.00 0.00 0.00 4.61
438 444 2.043992 TCTCGAAGAAAACAGTGGGGA 58.956 47.619 0.00 0.00 34.09 4.81
488 494 4.464069 AGACGGAGATCTTTTGGAAGAG 57.536 45.455 0.00 0.00 44.65 2.85
605 611 3.821841 CGTGTCTTCTTTTTATGTGCCC 58.178 45.455 0.00 0.00 0.00 5.36
671 677 4.090057 GGTGGCGACGCAGCTTTC 62.090 66.667 23.09 3.15 44.70 2.62
672 678 3.044305 GTGGCGACGCAGCTTTCT 61.044 61.111 23.09 0.00 41.67 2.52
673 679 1.736645 GTGGCGACGCAGCTTTCTA 60.737 57.895 23.09 0.00 41.67 2.10
947 962 1.006922 GCAAAGGCAGAACACCAGC 60.007 57.895 0.00 0.00 40.72 4.85
1913 1940 2.368875 AGTCTCCAACCAAGGTACACAG 59.631 50.000 0.00 0.00 0.00 3.66
1952 1979 7.601705 ACGTAACTCTCTCTACCTACTCTAT 57.398 40.000 0.00 0.00 0.00 1.98
2037 2070 6.980978 TCAAGCTAGTATTGATTACTGACAGC 59.019 38.462 1.25 0.00 41.36 4.40
2049 2082 6.369890 TGATTACTGACAGCTCTGTTCATTTC 59.630 38.462 1.25 0.00 45.05 2.17
2270 2333 7.041372 GGAAGTGTGTGCTTTGATTAAGTTAGA 60.041 37.037 0.00 0.00 36.19 2.10
2338 2403 2.713770 GCTGCATGCATGTCCTCG 59.286 61.111 26.79 8.76 42.31 4.63
2374 2439 7.279981 GCATTACATGTGAATTGAGGTGTAGTA 59.720 37.037 9.11 0.00 0.00 1.82
2446 2515 5.532032 GTCCTTAGCTGGAGTAGTAGTAAGG 59.468 48.000 0.00 0.00 37.57 2.69
2453 2522 1.952990 GAGTAGTAGTAAGGACCCGGC 59.047 57.143 0.00 0.00 0.00 6.13
2482 2551 2.703007 TGCTTAACCATGCCAAACCTTT 59.297 40.909 0.00 0.00 0.00 3.11
2503 2572 5.941555 TTGTTACCCAAAGTTTGACCAAT 57.058 34.783 17.33 0.48 0.00 3.16
2655 2724 4.961585 GGGGGATAGTATGATACTCCCTT 58.038 47.826 22.14 4.16 40.77 3.95
2656 2725 5.351405 GGGGGATAGTATGATACTCCCTTT 58.649 45.833 22.14 2.13 40.77 3.11
2658 2727 5.338463 GGGGATAGTATGATACTCCCTTTGC 60.338 48.000 22.14 8.28 40.77 3.68
2709 2781 7.476540 TTAATATGGACTACATACGGAGCAT 57.523 36.000 0.00 0.00 44.41 3.79
2723 2796 5.140747 ACGGAGCATAATGAGGAATCTAC 57.859 43.478 0.00 0.00 0.00 2.59
2821 2895 7.127339 TGAAGGGAGTAGTAATTAGCTCCAAAT 59.873 37.037 22.09 12.95 46.84 2.32
2837 2911 0.387565 AAATGGGTGTTCGGTTGCAC 59.612 50.000 0.00 0.00 35.07 4.57
2849 2923 0.029700 GGTTGCACCGTAGCGTTTTT 59.970 50.000 0.00 0.00 37.31 1.94
2850 2924 1.391787 GTTGCACCGTAGCGTTTTTC 58.608 50.000 0.00 0.00 37.31 2.29
2855 2929 2.466205 GCACCGTAGCGTTTTTCTTTTG 59.534 45.455 0.00 0.00 0.00 2.44
2917 2991 3.735237 TGAGACGAATATCCCAAGAGC 57.265 47.619 0.00 0.00 0.00 4.09
2959 3033 6.751888 ACTGATTTGTAACTTCAGTGCAAAAC 59.248 34.615 4.15 10.18 46.19 2.43
2960 3034 6.625362 TGATTTGTAACTTCAGTGCAAAACA 58.375 32.000 11.54 11.88 37.31 2.83
2986 3061 7.530010 GCATATGTATAGTATGCTTGGTTTGG 58.470 38.462 17.03 0.00 46.78 3.28
2989 3064 4.638421 TGTATAGTATGCTTGGTTTGGTGC 59.362 41.667 0.00 0.00 0.00 5.01
2990 3065 1.256812 AGTATGCTTGGTTTGGTGCC 58.743 50.000 0.00 0.00 0.00 5.01
3056 3131 6.261381 TGTCTTCTATTGTTAACTTTTGGCGT 59.739 34.615 7.22 0.00 0.00 5.68
3069 3144 1.315981 TTGGCGTCAAACCAAGCACA 61.316 50.000 0.00 0.00 42.23 4.57
3071 3146 0.031994 GGCGTCAAACCAAGCACAAT 59.968 50.000 0.00 0.00 0.00 2.71
3116 3314 2.454538 ACAGGCCTAGCTAACTACGTT 58.545 47.619 3.98 0.00 0.00 3.99
3117 3315 2.426381 ACAGGCCTAGCTAACTACGTTC 59.574 50.000 3.98 0.00 0.00 3.95
3152 3350 2.032377 TCGAATTTTGTGAACTCGTGGC 60.032 45.455 0.00 0.00 0.00 5.01
3153 3351 2.661594 GAATTTTGTGAACTCGTGGCC 58.338 47.619 0.00 0.00 0.00 5.36
3154 3352 1.981256 ATTTTGTGAACTCGTGGCCT 58.019 45.000 3.32 0.00 0.00 5.19
3155 3353 1.757682 TTTTGTGAACTCGTGGCCTT 58.242 45.000 3.32 0.00 0.00 4.35
3156 3354 1.021202 TTTGTGAACTCGTGGCCTTG 58.979 50.000 3.32 0.00 0.00 3.61
3157 3355 0.179234 TTGTGAACTCGTGGCCTTGA 59.821 50.000 3.32 0.00 0.00 3.02
3158 3356 0.179234 TGTGAACTCGTGGCCTTGAA 59.821 50.000 3.32 0.00 0.00 2.69
3159 3357 0.586802 GTGAACTCGTGGCCTTGAAC 59.413 55.000 3.32 0.00 0.00 3.18
3160 3358 0.468226 TGAACTCGTGGCCTTGAACT 59.532 50.000 3.32 0.00 0.00 3.01
3161 3359 1.149148 GAACTCGTGGCCTTGAACTC 58.851 55.000 3.32 0.00 0.00 3.01
3162 3360 0.600255 AACTCGTGGCCTTGAACTCG 60.600 55.000 3.32 0.00 0.00 4.18
3163 3361 1.738099 CTCGTGGCCTTGAACTCGG 60.738 63.158 3.32 0.00 0.00 4.63
3164 3362 2.154798 CTCGTGGCCTTGAACTCGGA 62.155 60.000 3.32 0.00 0.00 4.55
3165 3363 1.301401 CGTGGCCTTGAACTCGGAA 60.301 57.895 3.32 0.00 0.00 4.30
3166 3364 1.566018 CGTGGCCTTGAACTCGGAAC 61.566 60.000 3.32 0.00 0.00 3.62
3167 3365 1.072505 TGGCCTTGAACTCGGAACC 59.927 57.895 3.32 0.00 0.00 3.62
3168 3366 2.033194 GGCCTTGAACTCGGAACCG 61.033 63.158 6.94 6.94 41.35 4.44
3169 3367 2.033194 GCCTTGAACTCGGAACCGG 61.033 63.158 13.29 0.00 40.25 5.28
3170 3368 1.669440 CCTTGAACTCGGAACCGGA 59.331 57.895 9.46 0.00 40.25 5.14
3171 3369 0.249398 CCTTGAACTCGGAACCGGAT 59.751 55.000 9.46 0.00 40.25 4.18
3172 3370 1.641577 CTTGAACTCGGAACCGGATC 58.358 55.000 9.46 5.54 40.25 3.36
3173 3371 0.248289 TTGAACTCGGAACCGGATCC 59.752 55.000 20.51 20.51 40.25 3.36
3174 3372 0.613853 TGAACTCGGAACCGGATCCT 60.614 55.000 26.42 9.51 40.25 3.24
3175 3373 0.535797 GAACTCGGAACCGGATCCTT 59.464 55.000 26.42 15.30 40.25 3.36
3176 3374 0.981943 AACTCGGAACCGGATCCTTT 59.018 50.000 26.42 14.60 40.25 3.11
3177 3375 1.856629 ACTCGGAACCGGATCCTTTA 58.143 50.000 26.42 12.15 40.25 1.85
3178 3376 2.181975 ACTCGGAACCGGATCCTTTAA 58.818 47.619 26.42 9.87 40.25 1.52
3179 3377 2.093816 ACTCGGAACCGGATCCTTTAAC 60.094 50.000 26.42 1.47 40.25 2.01
3180 3378 1.901159 TCGGAACCGGATCCTTTAACA 59.099 47.619 26.42 2.75 40.25 2.41
3181 3379 2.502538 TCGGAACCGGATCCTTTAACAT 59.497 45.455 26.42 0.00 40.25 2.71
3182 3380 3.054948 TCGGAACCGGATCCTTTAACATT 60.055 43.478 26.42 0.00 40.25 2.71
3183 3381 4.161942 TCGGAACCGGATCCTTTAACATTA 59.838 41.667 26.42 0.42 40.25 1.90
3184 3382 4.877251 CGGAACCGGATCCTTTAACATTAA 59.123 41.667 26.42 0.00 37.34 1.40
3185 3383 5.007332 CGGAACCGGATCCTTTAACATTAAG 59.993 44.000 26.42 4.52 37.34 1.85
3186 3384 6.117488 GGAACCGGATCCTTTAACATTAAGA 58.883 40.000 22.87 0.00 36.50 2.10
3187 3385 6.600427 GGAACCGGATCCTTTAACATTAAGAA 59.400 38.462 22.87 0.00 36.50 2.52
3188 3386 7.201705 GGAACCGGATCCTTTAACATTAAGAAG 60.202 40.741 22.87 0.00 36.50 2.85
3189 3387 6.120220 ACCGGATCCTTTAACATTAAGAAGG 58.880 40.000 9.46 0.00 0.00 3.46
3190 3388 6.069847 ACCGGATCCTTTAACATTAAGAAGGA 60.070 38.462 9.46 6.18 35.35 3.36
3191 3389 6.826741 CCGGATCCTTTAACATTAAGAAGGAA 59.173 38.462 10.75 0.00 34.84 3.36
3192 3390 7.502561 CCGGATCCTTTAACATTAAGAAGGAAT 59.497 37.037 10.75 0.00 34.84 3.01
3193 3391 8.345565 CGGATCCTTTAACATTAAGAAGGAATG 58.654 37.037 10.75 0.00 34.84 2.67
3194 3392 9.190317 GGATCCTTTAACATTAAGAAGGAATGT 57.810 33.333 3.84 0.00 46.89 2.71
3203 3401 8.499403 ACATTAAGAAGGAATGTTAGAGAAGC 57.501 34.615 0.00 0.00 43.38 3.86
3204 3402 8.325046 ACATTAAGAAGGAATGTTAGAGAAGCT 58.675 33.333 0.00 0.00 43.38 3.74
3205 3403 9.823647 CATTAAGAAGGAATGTTAGAGAAGCTA 57.176 33.333 0.00 0.00 31.00 3.32
3206 3404 9.825109 ATTAAGAAGGAATGTTAGAGAAGCTAC 57.175 33.333 0.00 0.00 0.00 3.58
3207 3405 6.859112 AGAAGGAATGTTAGAGAAGCTACA 57.141 37.500 0.00 0.00 0.00 2.74
3208 3406 7.246171 AGAAGGAATGTTAGAGAAGCTACAA 57.754 36.000 0.00 0.00 0.00 2.41
3209 3407 7.856415 AGAAGGAATGTTAGAGAAGCTACAAT 58.144 34.615 0.00 0.00 0.00 2.71
3210 3408 8.982723 AGAAGGAATGTTAGAGAAGCTACAATA 58.017 33.333 0.00 0.00 0.00 1.90
3211 3409 8.950208 AAGGAATGTTAGAGAAGCTACAATAC 57.050 34.615 0.00 0.00 0.00 1.89
3212 3410 8.312669 AGGAATGTTAGAGAAGCTACAATACT 57.687 34.615 0.00 0.00 0.00 2.12
3213 3411 8.417884 AGGAATGTTAGAGAAGCTACAATACTC 58.582 37.037 0.00 0.00 0.00 2.59
3214 3412 8.417884 GGAATGTTAGAGAAGCTACAATACTCT 58.582 37.037 0.00 0.00 40.37 3.24
3222 3420 8.471609 AGAGAAGCTACAATACTCTAACTTTCC 58.528 37.037 0.00 0.00 36.39 3.13
3223 3421 8.368962 AGAAGCTACAATACTCTAACTTTCCT 57.631 34.615 0.00 0.00 0.00 3.36
3224 3422 8.817876 AGAAGCTACAATACTCTAACTTTCCTT 58.182 33.333 0.00 0.00 0.00 3.36
3225 3423 9.089601 GAAGCTACAATACTCTAACTTTCCTTC 57.910 37.037 0.00 0.00 0.00 3.46
3226 3424 8.368962 AGCTACAATACTCTAACTTTCCTTCT 57.631 34.615 0.00 0.00 0.00 2.85
3227 3425 8.817876 AGCTACAATACTCTAACTTTCCTTCTT 58.182 33.333 0.00 0.00 0.00 2.52
3228 3426 9.438228 GCTACAATACTCTAACTTTCCTTCTTT 57.562 33.333 0.00 0.00 0.00 2.52
3287 3485 8.854979 TTAATTTGCAATTTGATGATCTACCG 57.145 30.769 15.14 0.00 0.00 4.02
3288 3486 5.895636 TTTGCAATTTGATGATCTACCGT 57.104 34.783 0.00 0.00 0.00 4.83
3289 3487 6.993786 TTTGCAATTTGATGATCTACCGTA 57.006 33.333 0.00 0.00 0.00 4.02
3290 3488 7.566760 TTTGCAATTTGATGATCTACCGTAT 57.433 32.000 0.00 0.00 0.00 3.06
3291 3489 8.669946 TTTGCAATTTGATGATCTACCGTATA 57.330 30.769 0.00 0.00 0.00 1.47
3292 3490 7.652300 TGCAATTTGATGATCTACCGTATAC 57.348 36.000 0.00 0.00 0.00 1.47
3293 3491 7.213678 TGCAATTTGATGATCTACCGTATACA 58.786 34.615 3.32 0.00 0.00 2.29
3294 3492 7.877612 TGCAATTTGATGATCTACCGTATACAT 59.122 33.333 3.32 0.00 0.00 2.29
3295 3493 8.721478 GCAATTTGATGATCTACCGTATACATT 58.279 33.333 3.32 0.00 0.00 2.71
3328 3526 9.887629 AATTATATGCAAACAAATTGATGGTGA 57.112 25.926 0.00 0.00 41.85 4.02
3329 3527 9.887629 ATTATATGCAAACAAATTGATGGTGAA 57.112 25.926 0.00 0.00 41.85 3.18
3330 3528 9.716531 TTATATGCAAACAAATTGATGGTGAAA 57.283 25.926 0.00 0.00 41.85 2.69
3331 3529 8.795842 ATATGCAAACAAATTGATGGTGAAAT 57.204 26.923 0.00 0.00 41.85 2.17
3332 3530 9.887629 ATATGCAAACAAATTGATGGTGAAATA 57.112 25.926 0.00 0.00 41.85 1.40
3333 3531 8.618702 ATGCAAACAAATTGATGGTGAAATAA 57.381 26.923 0.00 0.00 41.85 1.40
3334 3532 8.442632 TGCAAACAAATTGATGGTGAAATAAA 57.557 26.923 0.00 0.00 41.85 1.40
3335 3533 8.896744 TGCAAACAAATTGATGGTGAAATAAAA 58.103 25.926 0.00 0.00 41.85 1.52
3336 3534 9.896263 GCAAACAAATTGATGGTGAAATAAAAT 57.104 25.926 0.00 0.00 41.85 1.82
3384 3582 7.933396 ACAGTAAATACCAACACTAAACAACC 58.067 34.615 0.00 0.00 0.00 3.77
3385 3583 7.776500 ACAGTAAATACCAACACTAAACAACCT 59.224 33.333 0.00 0.00 0.00 3.50
3386 3584 9.275398 CAGTAAATACCAACACTAAACAACCTA 57.725 33.333 0.00 0.00 0.00 3.08
3418 3616 8.667592 ATCTACTAACAGTCCTTAACTTTCCT 57.332 34.615 0.00 0.00 35.45 3.36
3419 3617 8.488308 TCTACTAACAGTCCTTAACTTTCCTT 57.512 34.615 0.00 0.00 35.45 3.36
3420 3618 8.583296 TCTACTAACAGTCCTTAACTTTCCTTC 58.417 37.037 0.00 0.00 35.45 3.46
3421 3619 7.376335 ACTAACAGTCCTTAACTTTCCTTCT 57.624 36.000 0.00 0.00 35.45 2.85
3422 3620 7.803131 ACTAACAGTCCTTAACTTTCCTTCTT 58.197 34.615 0.00 0.00 35.45 2.52
3423 3621 7.932491 ACTAACAGTCCTTAACTTTCCTTCTTC 59.068 37.037 0.00 0.00 35.45 2.87
3424 3622 6.248569 ACAGTCCTTAACTTTCCTTCTTCA 57.751 37.500 0.00 0.00 35.45 3.02
3425 3623 6.842676 ACAGTCCTTAACTTTCCTTCTTCAT 58.157 36.000 0.00 0.00 35.45 2.57
3426 3624 7.290813 ACAGTCCTTAACTTTCCTTCTTCATT 58.709 34.615 0.00 0.00 35.45 2.57
3427 3625 7.780271 ACAGTCCTTAACTTTCCTTCTTCATTT 59.220 33.333 0.00 0.00 35.45 2.32
3428 3626 8.633561 CAGTCCTTAACTTTCCTTCTTCATTTT 58.366 33.333 0.00 0.00 35.45 1.82
3429 3627 9.862149 AGTCCTTAACTTTCCTTCTTCATTTTA 57.138 29.630 0.00 0.00 33.03 1.52
3430 3628 9.894783 GTCCTTAACTTTCCTTCTTCATTTTAC 57.105 33.333 0.00 0.00 0.00 2.01
3431 3629 9.635404 TCCTTAACTTTCCTTCTTCATTTTACA 57.365 29.630 0.00 0.00 0.00 2.41
3432 3630 9.678941 CCTTAACTTTCCTTCTTCATTTTACAC 57.321 33.333 0.00 0.00 0.00 2.90
3436 3634 8.100508 ACTTTCCTTCTTCATTTTACACTAGC 57.899 34.615 0.00 0.00 0.00 3.42
3437 3635 7.175119 ACTTTCCTTCTTCATTTTACACTAGCC 59.825 37.037 0.00 0.00 0.00 3.93
3438 3636 6.374417 TCCTTCTTCATTTTACACTAGCCT 57.626 37.500 0.00 0.00 0.00 4.58
3439 3637 7.490657 TCCTTCTTCATTTTACACTAGCCTA 57.509 36.000 0.00 0.00 0.00 3.93
3440 3638 7.913789 TCCTTCTTCATTTTACACTAGCCTAA 58.086 34.615 0.00 0.00 0.00 2.69
3441 3639 7.822822 TCCTTCTTCATTTTACACTAGCCTAAC 59.177 37.037 0.00 0.00 0.00 2.34
3442 3640 7.606456 CCTTCTTCATTTTACACTAGCCTAACA 59.394 37.037 0.00 0.00 0.00 2.41
3443 3641 7.900782 TCTTCATTTTACACTAGCCTAACAC 57.099 36.000 0.00 0.00 0.00 3.32
3444 3642 7.676947 TCTTCATTTTACACTAGCCTAACACT 58.323 34.615 0.00 0.00 0.00 3.55
3445 3643 7.602644 TCTTCATTTTACACTAGCCTAACACTG 59.397 37.037 0.00 0.00 0.00 3.66
3446 3644 6.765403 TCATTTTACACTAGCCTAACACTGT 58.235 36.000 0.00 0.00 0.00 3.55
3447 3645 7.898918 TCATTTTACACTAGCCTAACACTGTA 58.101 34.615 0.00 0.00 0.00 2.74
3448 3646 8.033038 TCATTTTACACTAGCCTAACACTGTAG 58.967 37.037 0.00 0.00 0.00 2.74
3449 3647 3.870633 ACACTAGCCTAACACTGTAGC 57.129 47.619 0.00 0.00 0.00 3.58
3450 3648 3.162666 ACACTAGCCTAACACTGTAGCA 58.837 45.455 0.00 0.00 0.00 3.49
3451 3649 3.056749 ACACTAGCCTAACACTGTAGCAC 60.057 47.826 0.00 0.00 0.00 4.40
3452 3650 2.163815 ACTAGCCTAACACTGTAGCACG 59.836 50.000 0.00 0.00 0.00 5.34
3453 3651 0.246635 AGCCTAACACTGTAGCACGG 59.753 55.000 0.00 0.00 0.00 4.94
3454 3652 0.037605 GCCTAACACTGTAGCACGGT 60.038 55.000 0.00 0.00 38.46 4.83
3461 3659 2.080286 ACTGTAGCACGGTGACATTC 57.920 50.000 13.29 0.00 36.13 2.67
3462 3660 1.337823 ACTGTAGCACGGTGACATTCC 60.338 52.381 13.29 0.00 36.13 3.01
3463 3661 0.973632 TGTAGCACGGTGACATTCCT 59.026 50.000 13.29 0.48 0.00 3.36
3464 3662 1.346395 TGTAGCACGGTGACATTCCTT 59.654 47.619 13.29 0.00 0.00 3.36
3465 3663 2.000447 GTAGCACGGTGACATTCCTTC 59.000 52.381 13.29 0.00 0.00 3.46
3466 3664 0.687354 AGCACGGTGACATTCCTTCT 59.313 50.000 13.29 0.00 0.00 2.85
3467 3665 1.079503 GCACGGTGACATTCCTTCTC 58.920 55.000 13.29 0.00 0.00 2.87
3468 3666 1.608025 GCACGGTGACATTCCTTCTCA 60.608 52.381 13.29 0.00 0.00 3.27
3469 3667 2.766313 CACGGTGACATTCCTTCTCAA 58.234 47.619 0.74 0.00 0.00 3.02
3470 3668 3.338249 CACGGTGACATTCCTTCTCAAT 58.662 45.455 0.74 0.00 0.00 2.57
3471 3669 3.125829 CACGGTGACATTCCTTCTCAATG 59.874 47.826 0.74 0.00 37.29 2.82
3472 3670 3.244561 ACGGTGACATTCCTTCTCAATGT 60.245 43.478 0.00 0.00 45.28 2.71
3473 3671 3.753272 CGGTGACATTCCTTCTCAATGTT 59.247 43.478 0.00 0.00 43.16 2.71
3474 3672 4.935205 CGGTGACATTCCTTCTCAATGTTA 59.065 41.667 0.00 0.00 43.16 2.41
3475 3673 5.063944 CGGTGACATTCCTTCTCAATGTTAG 59.936 44.000 0.00 0.00 43.16 2.34
3476 3674 6.173339 GGTGACATTCCTTCTCAATGTTAGA 58.827 40.000 0.00 0.00 43.16 2.10
3477 3675 6.314896 GGTGACATTCCTTCTCAATGTTAGAG 59.685 42.308 0.00 0.00 43.16 2.43
3478 3676 6.314896 GTGACATTCCTTCTCAATGTTAGAGG 59.685 42.308 0.00 0.00 43.16 3.69
3479 3677 6.213397 TGACATTCCTTCTCAATGTTAGAGGA 59.787 38.462 0.00 0.00 43.16 3.71
3480 3678 7.092712 TGACATTCCTTCTCAATGTTAGAGGAT 60.093 37.037 0.00 0.00 43.16 3.24
3481 3679 7.278875 ACATTCCTTCTCAATGTTAGAGGATC 58.721 38.462 0.00 0.00 40.83 3.36
3482 3680 5.878406 TCCTTCTCAATGTTAGAGGATCC 57.122 43.478 2.48 2.48 33.66 3.36
3483 3681 4.342378 TCCTTCTCAATGTTAGAGGATCCG 59.658 45.833 5.98 0.00 33.66 4.18
3484 3682 4.502259 CCTTCTCAATGTTAGAGGATCCGG 60.502 50.000 5.98 0.00 33.66 5.14
3485 3683 3.643237 TCTCAATGTTAGAGGATCCGGT 58.357 45.455 5.98 0.00 33.66 5.28
3486 3684 4.030913 TCTCAATGTTAGAGGATCCGGTT 58.969 43.478 5.98 0.00 33.66 4.44
3487 3685 4.099573 TCTCAATGTTAGAGGATCCGGTTC 59.900 45.833 5.98 1.67 33.66 3.62
3526 3724 4.327680 GCTGAATGTACTGGATATTCCCC 58.672 47.826 6.87 0.00 35.37 4.81
3566 3766 2.074576 GGGCTTCGTTTGGTAGTTCTC 58.925 52.381 0.00 0.00 0.00 2.87
3586 3786 0.810823 GAGTCTGGAGATGCTGCTGC 60.811 60.000 8.89 8.89 40.20 5.25
3587 3787 1.818785 GTCTGGAGATGCTGCTGCC 60.819 63.158 13.47 0.00 38.71 4.85
3588 3788 2.271173 CTGGAGATGCTGCTGCCA 59.729 61.111 13.47 2.34 38.71 4.92
3589 3789 2.045634 TGGAGATGCTGCTGCCAC 60.046 61.111 13.47 7.02 38.71 5.01
3590 3790 2.045634 GGAGATGCTGCTGCCACA 60.046 61.111 13.47 0.00 38.71 4.17
3591 3791 2.404995 GGAGATGCTGCTGCCACAC 61.405 63.158 13.47 5.69 38.71 3.82
3592 3792 2.360852 AGATGCTGCTGCCACACC 60.361 61.111 13.47 0.00 38.71 4.16
3593 3793 3.807538 GATGCTGCTGCCACACCG 61.808 66.667 13.47 0.00 38.71 4.94
3594 3794 4.334118 ATGCTGCTGCCACACCGA 62.334 61.111 13.47 0.00 38.71 4.69
3595 3795 3.633609 ATGCTGCTGCCACACCGAT 62.634 57.895 13.47 0.00 38.71 4.18
3596 3796 2.125147 GCTGCTGCCACACCGATA 60.125 61.111 3.85 0.00 0.00 2.92
3597 3797 1.524621 GCTGCTGCCACACCGATAT 60.525 57.895 3.85 0.00 0.00 1.63
3598 3798 1.779025 GCTGCTGCCACACCGATATG 61.779 60.000 3.85 0.00 0.00 1.78
3599 3799 1.153188 TGCTGCCACACCGATATGG 60.153 57.895 0.00 0.00 46.41 2.74
3605 3805 2.154854 CCACACCGATATGGCACTAG 57.845 55.000 0.00 0.00 43.94 2.57
3606 3806 1.686587 CCACACCGATATGGCACTAGA 59.313 52.381 0.00 0.00 43.94 2.43
3607 3807 2.102420 CCACACCGATATGGCACTAGAA 59.898 50.000 0.00 0.00 43.94 2.10
3608 3808 3.431626 CCACACCGATATGGCACTAGAAA 60.432 47.826 0.00 0.00 43.94 2.52
3635 3835 8.138074 CACATAATCTTGCTAGTGCTCTACTAA 58.862 37.037 0.00 0.00 41.20 2.24
3642 3842 9.967451 TCTTGCTAGTGCTCTACTAATAGATAT 57.033 33.333 0.00 0.00 41.20 1.63
4140 4370 1.796749 GACGAACGGACGAGCTGAC 60.797 63.158 10.16 0.00 37.03 3.51
4618 4856 0.249447 GTGAGTTTGTTGCTTGGGCC 60.249 55.000 0.00 0.00 37.74 5.80
4619 4857 0.396974 TGAGTTTGTTGCTTGGGCCT 60.397 50.000 4.53 0.00 37.74 5.19
4620 4858 0.752658 GAGTTTGTTGCTTGGGCCTT 59.247 50.000 4.53 0.00 37.74 4.35
4621 4859 0.465287 AGTTTGTTGCTTGGGCCTTG 59.535 50.000 4.53 0.00 37.74 3.61
4622 4860 0.532640 GTTTGTTGCTTGGGCCTTGG 60.533 55.000 4.53 0.00 37.74 3.61
4623 4861 1.694133 TTTGTTGCTTGGGCCTTGGG 61.694 55.000 4.53 0.00 37.74 4.12
4639 4877 4.767255 GGCCAGTGGAGTGGAGCG 62.767 72.222 15.20 0.00 40.44 5.03
4788 5029 2.338577 ACTGCCCAGCTGTTATCATC 57.661 50.000 13.81 0.00 37.43 2.92
4793 5034 2.205074 CCCAGCTGTTATCATCACGAC 58.795 52.381 13.81 0.00 0.00 4.34
4794 5035 2.418609 CCCAGCTGTTATCATCACGACA 60.419 50.000 13.81 0.00 0.00 4.35
4797 5038 4.260497 CCAGCTGTTATCATCACGACAATG 60.260 45.833 13.81 0.00 0.00 2.82
4799 5040 4.568359 AGCTGTTATCATCACGACAATGTC 59.432 41.667 2.75 2.75 0.00 3.06
4803 5044 7.433708 TGTTATCATCACGACAATGTCTTTT 57.566 32.000 11.92 0.00 0.00 2.27
4830 5084 2.073056 TGCGTGTGTATCCATCAACAC 58.927 47.619 0.00 0.00 44.97 3.32
4841 5095 1.266718 CCATCAACACGTTCCACCAAG 59.733 52.381 0.00 0.00 0.00 3.61
4845 5099 2.983592 CACGTTCCACCAAGGGGC 60.984 66.667 0.00 0.00 37.90 5.80
4846 5100 4.636435 ACGTTCCACCAAGGGGCG 62.636 66.667 0.00 0.00 39.56 6.13
4848 5102 3.961414 GTTCCACCAAGGGGCGGA 61.961 66.667 0.00 0.00 43.74 5.54
4855 5123 3.508840 CAAGGGGCGGACGCAATC 61.509 66.667 18.95 7.15 44.11 2.67
4861 5129 0.806241 GGGCGGACGCAATCTTTTTA 59.194 50.000 18.95 0.00 44.11 1.52
4862 5130 1.200484 GGGCGGACGCAATCTTTTTAA 59.800 47.619 18.95 0.00 44.11 1.52
4865 5133 3.363724 GGCGGACGCAATCTTTTTAAAAG 59.636 43.478 18.95 10.89 44.11 2.27
4870 5138 5.003496 GGACGCAATCTTTTTAAAAGATCGC 59.997 40.000 26.74 25.86 36.07 4.58
4873 5141 4.265320 GCAATCTTTTTAAAAGATCGCCCG 59.735 41.667 26.74 16.31 36.07 6.13
4880 5148 3.561120 AAAGATCGCCCGGGTTGCA 62.561 57.895 24.63 3.52 0.00 4.08
4890 5158 2.281484 GGGTTGCAAGCCGTCAGA 60.281 61.111 30.27 0.00 36.76 3.27
4891 5159 1.675641 GGGTTGCAAGCCGTCAGAT 60.676 57.895 30.27 0.00 36.76 2.90
4892 5160 1.648467 GGGTTGCAAGCCGTCAGATC 61.648 60.000 30.27 6.71 36.76 2.75
4893 5161 0.674895 GGTTGCAAGCCGTCAGATCT 60.675 55.000 17.84 0.00 0.00 2.75
4894 5162 0.445436 GTTGCAAGCCGTCAGATCTG 59.555 55.000 17.07 17.07 0.00 2.90
4896 5164 1.078848 GCAAGCCGTCAGATCTGGT 60.079 57.895 22.42 0.00 0.00 4.00
4897 5165 1.364626 GCAAGCCGTCAGATCTGGTG 61.365 60.000 22.42 14.37 0.00 4.17
4898 5166 1.078848 AAGCCGTCAGATCTGGTGC 60.079 57.895 22.42 20.08 0.00 5.01
4900 5168 1.153289 GCCGTCAGATCTGGTGCAT 60.153 57.895 22.42 0.00 0.00 3.96
4902 5170 0.873312 CCGTCAGATCTGGTGCATCG 60.873 60.000 22.42 15.51 0.00 3.84
4903 5171 0.101219 CGTCAGATCTGGTGCATCGA 59.899 55.000 22.42 0.00 0.00 3.59
4904 5172 1.850377 GTCAGATCTGGTGCATCGAG 58.150 55.000 22.42 0.00 0.00 4.04
4905 5173 0.103755 TCAGATCTGGTGCATCGAGC 59.896 55.000 22.42 0.00 45.96 5.03
4914 5182 3.698382 GCATCGAGCGTCCAAGAG 58.302 61.111 0.00 0.00 0.00 2.85
4915 5183 1.139734 GCATCGAGCGTCCAAGAGA 59.860 57.895 0.00 0.00 0.00 3.10
4916 5184 0.869454 GCATCGAGCGTCCAAGAGAG 60.869 60.000 0.00 0.00 0.00 3.20
4925 5833 1.477295 CGTCCAAGAGAGAGGGGTAAC 59.523 57.143 0.00 0.00 0.00 2.50
4928 5836 1.751924 CCAAGAGAGAGGGGTAACGAG 59.248 57.143 0.00 0.00 37.60 4.18
4936 5844 1.212441 GAGGGGTAACGAGAGAGGAGA 59.788 57.143 0.00 0.00 37.60 3.71
4955 5863 0.103337 AAGGGAAGGAGAAAGGGGGT 60.103 55.000 0.00 0.00 0.00 4.95
4972 5880 4.308458 TCGGTGGCGGTGTCCTTG 62.308 66.667 0.00 0.00 0.00 3.61
4973 5881 4.308458 CGGTGGCGGTGTCCTTGA 62.308 66.667 0.00 0.00 0.00 3.02
4980 5888 3.637273 GGTGTCCTTGAGCGGGGT 61.637 66.667 0.00 0.00 0.00 4.95
4983 5891 2.266055 GTCCTTGAGCGGGGTGAG 59.734 66.667 0.00 0.00 0.00 3.51
4987 5895 1.144936 CTTGAGCGGGGTGAGGATC 59.855 63.158 0.00 0.00 0.00 3.36
4990 5898 1.826921 GAGCGGGGTGAGGATCGTA 60.827 63.158 0.00 0.00 38.61 3.43
4993 5901 2.117156 CGGGGTGAGGATCGTACGT 61.117 63.158 16.05 2.33 38.61 3.57
5014 5922 1.746470 CATCTGTTGCATGGCTGAGA 58.254 50.000 0.00 0.00 0.00 3.27
5021 5929 2.513204 CATGGCTGAGAGGTGGCG 60.513 66.667 0.00 0.00 0.00 5.69
5034 5942 1.213182 AGGTGGCGACTCTAGATGAGA 59.787 52.381 0.00 0.00 45.39 3.27
5055 5963 4.770010 AGAGTCAGTAGGGAGAAAGTGAAG 59.230 45.833 0.00 0.00 0.00 3.02
5060 5968 5.046304 TCAGTAGGGAGAAAGTGAAGATTGG 60.046 44.000 0.00 0.00 0.00 3.16
5064 5972 2.163211 GGAGAAAGTGAAGATTGGCTGC 59.837 50.000 0.00 0.00 0.00 5.25
5080 5988 2.542411 GGCTGCTGTTGAGAAACAAGTG 60.542 50.000 0.00 0.00 39.30 3.16
5087 5995 5.008613 GCTGTTGAGAAACAAGTGAATGGTA 59.991 40.000 0.00 0.00 39.30 3.25
5103 6011 3.730215 TGGTAGCTGAGAGAGAAGAGT 57.270 47.619 0.00 0.00 0.00 3.24
5106 6014 4.944930 TGGTAGCTGAGAGAGAAGAGTAAC 59.055 45.833 0.00 0.00 0.00 2.50
5111 6019 4.201783 GCTGAGAGAGAAGAGTAACGAGAC 60.202 50.000 0.00 0.00 0.00 3.36
5118 6026 6.848451 AGAGAAGAGTAACGAGACAGATTTC 58.152 40.000 0.00 0.00 0.00 2.17
5119 6027 6.657541 AGAGAAGAGTAACGAGACAGATTTCT 59.342 38.462 0.00 0.00 0.00 2.52
5151 6059 4.607239 ACGTCTAGGGAGATAAGGTTCAA 58.393 43.478 0.00 0.00 33.14 2.69
5155 6063 6.342111 GTCTAGGGAGATAAGGTTCAACAAG 58.658 44.000 0.00 0.00 33.14 3.16
5194 6103 5.011090 GGCTTTCCCATTTTCTAACCATC 57.989 43.478 0.00 0.00 0.00 3.51
5197 6106 5.105917 GCTTTCCCATTTTCTAACCATCGAA 60.106 40.000 0.00 0.00 0.00 3.71
5198 6107 6.571537 GCTTTCCCATTTTCTAACCATCGAAA 60.572 38.462 0.00 0.00 0.00 3.46
5207 6116 6.928979 TTCTAACCATCGAAACTTTTGTCA 57.071 33.333 0.00 0.00 0.00 3.58
5219 6128 7.061673 TCGAAACTTTTGTCAAGATTTGTGTTG 59.938 33.333 0.00 0.00 0.00 3.33
5224 6133 8.835439 ACTTTTGTCAAGATTTGTGTTGTTTTT 58.165 25.926 0.00 0.00 0.00 1.94
5306 6215 9.442047 TTTTTGTTCTTAGCCTGAATTTTTGAA 57.558 25.926 0.00 0.00 0.00 2.69
5307 6216 8.419076 TTTGTTCTTAGCCTGAATTTTTGAAC 57.581 30.769 0.00 0.00 33.94 3.18
5313 6222 2.871637 GCCTGAATTTTTGAACTGCCCC 60.872 50.000 0.00 0.00 0.00 5.80
5314 6223 2.634453 CCTGAATTTTTGAACTGCCCCT 59.366 45.455 0.00 0.00 0.00 4.79
5315 6224 3.831911 CCTGAATTTTTGAACTGCCCCTA 59.168 43.478 0.00 0.00 0.00 3.53
5318 6227 6.432403 TGAATTTTTGAACTGCCCCTATTT 57.568 33.333 0.00 0.00 0.00 1.40
5319 6228 6.229733 TGAATTTTTGAACTGCCCCTATTTG 58.770 36.000 0.00 0.00 0.00 2.32
5320 6229 5.823861 ATTTTTGAACTGCCCCTATTTGT 57.176 34.783 0.00 0.00 0.00 2.83
5321 6230 4.599047 TTTTGAACTGCCCCTATTTGTG 57.401 40.909 0.00 0.00 0.00 3.33
5322 6231 2.214376 TGAACTGCCCCTATTTGTGG 57.786 50.000 0.00 0.00 0.00 4.17
5323 6232 1.427368 TGAACTGCCCCTATTTGTGGT 59.573 47.619 0.00 0.00 0.00 4.16
5363 6272 4.143543 ACCAAAATTTTGATTTGCCCCTG 58.856 39.130 28.44 12.29 40.55 4.45
5366 6275 5.278414 CCAAAATTTTGATTTGCCCCTGTTC 60.278 40.000 28.44 0.00 40.55 3.18
5369 6278 0.178975 TTGATTTGCCCCTGTTCGGT 60.179 50.000 0.00 0.00 0.00 4.69
5370 6279 0.178975 TGATTTGCCCCTGTTCGGTT 60.179 50.000 0.00 0.00 0.00 4.44
5371 6280 1.074084 TGATTTGCCCCTGTTCGGTTA 59.926 47.619 0.00 0.00 0.00 2.85
5373 6282 1.611519 TTTGCCCCTGTTCGGTTAAG 58.388 50.000 0.00 0.00 0.00 1.85
5374 6283 0.475044 TTGCCCCTGTTCGGTTAAGT 59.525 50.000 0.00 0.00 0.00 2.24
5375 6284 0.035739 TGCCCCTGTTCGGTTAAGTC 59.964 55.000 0.00 0.00 0.00 3.01
5376 6285 1.017701 GCCCCTGTTCGGTTAAGTCG 61.018 60.000 0.00 0.00 0.00 4.18
5377 6286 0.604578 CCCCTGTTCGGTTAAGTCGA 59.395 55.000 0.00 0.00 34.62 4.20
5390 6301 5.236282 GGTTAAGTCGACTTTTCTTAGGCT 58.764 41.667 33.82 10.09 37.40 4.58
5402 6314 8.155821 ACTTTTCTTAGGCTACTTTTTGACTC 57.844 34.615 0.00 0.00 0.00 3.36
5429 6341 4.346709 CCTGTTTGGGGTAGGTCAAATTTT 59.653 41.667 0.00 0.00 35.66 1.82
5430 6342 5.163248 CCTGTTTGGGGTAGGTCAAATTTTT 60.163 40.000 0.00 0.00 35.66 1.94
5431 6343 5.675538 TGTTTGGGGTAGGTCAAATTTTTG 58.324 37.500 0.00 0.00 39.48 2.44
5434 6346 5.283457 TGGGGTAGGTCAAATTTTTGTTG 57.717 39.130 3.18 0.00 39.18 3.33
5435 6347 4.062293 GGGGTAGGTCAAATTTTTGTTGC 58.938 43.478 3.18 0.00 39.18 4.17
5438 6350 5.465390 GGGTAGGTCAAATTTTTGTTGCTTC 59.535 40.000 3.18 0.00 39.18 3.86
5442 6354 7.075674 AGGTCAAATTTTTGTTGCTTCTTTG 57.924 32.000 3.18 0.00 39.18 2.77
5443 6355 5.738693 GGTCAAATTTTTGTTGCTTCTTTGC 59.261 36.000 3.18 0.00 39.18 3.68
5475 6395 6.836953 TGCTTTTGTTTTTCTTTGTTTAGCC 58.163 32.000 0.00 0.00 0.00 3.93
5477 6397 6.410243 TTTTGTTTTTCTTTGTTTAGCCGG 57.590 33.333 0.00 0.00 0.00 6.13
5488 6408 6.532302 TCTTTGTTTAGCCGGTTTTCTTTTTC 59.468 34.615 1.90 0.00 0.00 2.29
5489 6409 5.585820 TGTTTAGCCGGTTTTCTTTTTCT 57.414 34.783 1.90 0.00 0.00 2.52
5539 6459 5.722021 ATTGGGTGAGTGGAAATGTAAAC 57.278 39.130 0.00 0.00 0.00 2.01
5543 6463 5.242838 TGGGTGAGTGGAAATGTAAACATTC 59.757 40.000 8.70 3.52 45.06 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.086457 TGGCATTTTCTTACCTTCTTCCC 58.914 43.478 0.00 0.00 0.00 3.97
28 29 3.825908 AGGTCCCTTGGCATTTTCTTA 57.174 42.857 0.00 0.00 0.00 2.10
35 36 1.149174 CGCATAGGTCCCTTGGCAT 59.851 57.895 8.89 0.00 0.00 4.40
52 53 2.360350 ACCTGATTGCAGCCACCG 60.360 61.111 0.00 0.00 40.91 4.94
58 59 2.099592 ACACAAACACACCTGATTGCAG 59.900 45.455 0.00 0.00 41.93 4.41
61 62 4.108699 ACAACACAAACACACCTGATTG 57.891 40.909 0.00 0.00 36.49 2.67
62 63 4.462483 AGAACAACACAAACACACCTGATT 59.538 37.500 0.00 0.00 0.00 2.57
67 68 4.967575 CGATAAGAACAACACAAACACACC 59.032 41.667 0.00 0.00 0.00 4.16
98 99 2.680339 GAGCTATGCAGAAAACTCACCC 59.320 50.000 0.00 0.00 0.00 4.61
118 119 1.205893 GCCCACCAAAACACAACTTGA 59.794 47.619 0.00 0.00 0.00 3.02
137 138 1.143620 TGGCACAAAAGGCACAAGC 59.856 52.632 0.00 0.00 39.34 4.01
168 169 4.137116 TCAAATCCTACAGAACATCCCG 57.863 45.455 0.00 0.00 0.00 5.14
187 188 7.608376 TCGACTAACCACAATCCAAATTATTCA 59.392 33.333 0.00 0.00 0.00 2.57
190 191 8.519799 AATCGACTAACCACAATCCAAATTAT 57.480 30.769 0.00 0.00 0.00 1.28
192 193 6.834168 AATCGACTAACCACAATCCAAATT 57.166 33.333 0.00 0.00 0.00 1.82
194 195 6.263392 TCAAAATCGACTAACCACAATCCAAA 59.737 34.615 0.00 0.00 0.00 3.28
196 197 5.309638 TCAAAATCGACTAACCACAATCCA 58.690 37.500 0.00 0.00 0.00 3.41
197 198 5.873179 TCAAAATCGACTAACCACAATCC 57.127 39.130 0.00 0.00 0.00 3.01
200 201 6.627395 ACAATCAAAATCGACTAACCACAA 57.373 33.333 0.00 0.00 0.00 3.33
202 203 6.370718 AGGTACAATCAAAATCGACTAACCAC 59.629 38.462 0.00 0.00 0.00 4.16
203 204 6.469410 AGGTACAATCAAAATCGACTAACCA 58.531 36.000 0.00 0.00 0.00 3.67
204 205 6.592607 TGAGGTACAATCAAAATCGACTAACC 59.407 38.462 0.00 0.00 0.00 2.85
206 207 7.383687 ACTGAGGTACAATCAAAATCGACTAA 58.616 34.615 0.00 0.00 0.00 2.24
208 209 5.794894 ACTGAGGTACAATCAAAATCGACT 58.205 37.500 0.00 0.00 0.00 4.18
209 210 6.481954 AACTGAGGTACAATCAAAATCGAC 57.518 37.500 0.00 0.00 0.00 4.20
210 211 7.012894 ACAAAACTGAGGTACAATCAAAATCGA 59.987 33.333 0.00 0.00 0.00 3.59
211 212 7.138736 ACAAAACTGAGGTACAATCAAAATCG 58.861 34.615 0.00 0.00 0.00 3.34
212 213 8.871686 AACAAAACTGAGGTACAATCAAAATC 57.128 30.769 0.00 0.00 0.00 2.17
213 214 9.097257 CAAACAAAACTGAGGTACAATCAAAAT 57.903 29.630 0.00 0.00 0.00 1.82
223 225 3.872771 GACGGTCAAACAAAACTGAGGTA 59.127 43.478 2.62 0.00 0.00 3.08
226 228 3.621268 TCAGACGGTCAAACAAAACTGAG 59.379 43.478 11.27 0.00 0.00 3.35
240 242 4.708177 CCCTTGATTTATGATCAGACGGT 58.292 43.478 0.09 0.00 0.00 4.83
242 244 4.129380 TGCCCTTGATTTATGATCAGACG 58.871 43.478 0.09 0.00 0.00 4.18
262 264 5.382618 AGGTTTGTCAAATTCTGATCTGC 57.617 39.130 0.40 0.00 36.14 4.26
316 318 9.565090 GTTATAAACCTAAAAATAGGGATCGGT 57.435 33.333 6.83 0.00 41.51 4.69
438 444 0.890542 TGCTTTTCTCCTGCATGCGT 60.891 50.000 14.09 0.00 0.00 5.24
605 611 3.319904 GCCTATTACGTGCTGGCG 58.680 61.111 0.00 0.00 33.96 5.69
671 677 6.313252 GTGAAAACGACTAGTCCTGTAGTAG 58.687 44.000 17.23 3.13 37.18 2.57
672 678 5.106948 CGTGAAAACGACTAGTCCTGTAGTA 60.107 44.000 17.23 0.00 33.18 1.82
673 679 4.320057 CGTGAAAACGACTAGTCCTGTAGT 60.320 45.833 17.23 5.95 35.88 2.73
947 962 2.197577 GCTTACGCTAGCTCCTTCTTG 58.802 52.381 13.93 0.00 38.15 3.02
990 1014 1.078497 GGGATCCATGCACGACACA 60.078 57.895 15.23 0.00 0.00 3.72
1593 1617 2.040544 CGCTGCGGACCCATTCTTT 61.041 57.895 15.40 0.00 0.00 2.52
1952 1979 1.348696 TCAGATTCAGAGCAGCCAACA 59.651 47.619 0.00 0.00 0.00 3.33
2037 2070 6.820656 AGGTAGCAGTATTGAAATGAACAGAG 59.179 38.462 0.00 0.00 0.00 3.35
2049 2082 1.129326 GCGCGTAGGTAGCAGTATTG 58.871 55.000 8.43 0.00 34.19 1.90
2223 2286 5.205821 TCCCTCGTATTGACCTCTGATTAA 58.794 41.667 0.00 0.00 0.00 1.40
2228 2291 2.761208 ACTTCCCTCGTATTGACCTCTG 59.239 50.000 0.00 0.00 0.00 3.35
2233 2296 2.993899 CACACACTTCCCTCGTATTGAC 59.006 50.000 0.00 0.00 0.00 3.18
2270 2333 1.873698 ACACTGTCGCCGTTGTAAAT 58.126 45.000 0.00 0.00 0.00 1.40
2393 2462 2.163613 GCAAACCCTAATACACACTGCC 59.836 50.000 0.00 0.00 0.00 4.85
2446 2515 0.605589 AAGCACAAACTAGCCGGGTC 60.606 55.000 10.79 0.00 0.00 4.46
2453 2522 3.505680 TGGCATGGTTAAGCACAAACTAG 59.494 43.478 9.99 0.00 0.00 2.57
2482 2551 7.419711 TTTATTGGTCAAACTTTGGGTAACA 57.580 32.000 1.62 0.00 39.74 2.41
2575 2644 9.426837 GCATTTTTGTCATTGCCACATATATAT 57.573 29.630 0.00 0.00 0.00 0.86
2578 2647 6.637657 TGCATTTTTGTCATTGCCACATATA 58.362 32.000 0.00 0.00 34.20 0.86
2581 2650 3.741249 TGCATTTTTGTCATTGCCACAT 58.259 36.364 0.00 0.00 34.20 3.21
2582 2651 3.189618 TGCATTTTTGTCATTGCCACA 57.810 38.095 0.00 0.00 34.20 4.17
2583 2652 3.607542 GCTTGCATTTTTGTCATTGCCAC 60.608 43.478 0.00 0.00 34.20 5.01
2586 2655 2.548904 TGGCTTGCATTTTTGTCATTGC 59.451 40.909 0.00 0.00 35.67 3.56
2587 2656 5.640357 ACTATGGCTTGCATTTTTGTCATTG 59.360 36.000 0.00 0.00 0.00 2.82
2588 2657 5.797051 ACTATGGCTTGCATTTTTGTCATT 58.203 33.333 0.00 0.00 0.00 2.57
2589 2658 5.410355 ACTATGGCTTGCATTTTTGTCAT 57.590 34.783 0.00 0.00 0.00 3.06
2685 2756 6.904463 TGCTCCGTATGTAGTCCATATTAA 57.096 37.500 0.00 0.00 38.29 1.40
2686 2757 8.584063 TTATGCTCCGTATGTAGTCCATATTA 57.416 34.615 0.00 0.00 38.29 0.98
2698 2770 5.728471 AGATTCCTCATTATGCTCCGTATG 58.272 41.667 0.00 0.00 0.00 2.39
2701 2773 4.588951 TGTAGATTCCTCATTATGCTCCGT 59.411 41.667 0.00 0.00 0.00 4.69
2704 2776 9.547753 TTAAAGTGTAGATTCCTCATTATGCTC 57.452 33.333 0.00 0.00 0.00 4.26
2795 2869 5.525484 TGGAGCTAATTACTACTCCCTTCA 58.475 41.667 16.45 2.11 46.76 3.02
2797 2871 6.886178 TTTGGAGCTAATTACTACTCCCTT 57.114 37.500 16.45 0.00 46.76 3.95
2799 2873 5.998363 CCATTTGGAGCTAATTACTACTCCC 59.002 44.000 16.45 4.07 46.76 4.30
2837 2911 3.040099 CCACAAAAGAAAAACGCTACGG 58.960 45.455 0.00 0.00 0.00 4.02
2843 2917 4.201542 CGGTGTTTCCACAAAAGAAAAACG 60.202 41.667 0.00 0.00 40.78 3.60
2844 2918 4.687018 ACGGTGTTTCCACAAAAGAAAAAC 59.313 37.500 0.00 0.00 43.71 2.43
2849 2923 3.082548 TCAACGGTGTTTCCACAAAAGA 58.917 40.909 0.00 0.00 43.71 2.52
2850 2924 3.495670 TCAACGGTGTTTCCACAAAAG 57.504 42.857 0.00 0.00 43.71 2.27
2986 3061 4.562394 CACCGACAAATCAAATATTGGCAC 59.438 41.667 0.00 0.00 34.09 5.01
2989 3064 6.644592 ACAAACACCGACAAATCAAATATTGG 59.355 34.615 0.00 0.00 0.00 3.16
2990 3065 7.168972 ACACAAACACCGACAAATCAAATATTG 59.831 33.333 0.00 0.00 0.00 1.90
3056 3131 5.278907 CCACTATTCATTGTGCTTGGTTTGA 60.279 40.000 0.00 0.00 33.23 2.69
3069 3144 9.905713 TTAGCTCAAACTATTCCACTATTCATT 57.094 29.630 0.00 0.00 0.00 2.57
3071 3146 9.162764 GTTTAGCTCAAACTATTCCACTATTCA 57.837 33.333 0.00 0.00 42.79 2.57
3116 3314 7.325338 CACAAAATTCGACTAAGAACTACTCGA 59.675 37.037 0.00 0.00 32.39 4.04
3117 3315 7.325338 TCACAAAATTCGACTAAGAACTACTCG 59.675 37.037 0.00 0.00 32.39 4.18
3152 3350 0.249398 ATCCGGTTCCGAGTTCAAGG 59.751 55.000 13.08 0.00 0.00 3.61
3153 3351 1.641577 GATCCGGTTCCGAGTTCAAG 58.358 55.000 13.08 0.00 0.00 3.02
3154 3352 0.248289 GGATCCGGTTCCGAGTTCAA 59.752 55.000 15.75 0.00 0.00 2.69
3155 3353 0.613853 AGGATCCGGTTCCGAGTTCA 60.614 55.000 22.98 0.00 40.94 3.18
3156 3354 0.535797 AAGGATCCGGTTCCGAGTTC 59.464 55.000 22.98 6.22 40.94 3.01
3157 3355 0.981943 AAAGGATCCGGTTCCGAGTT 59.018 50.000 22.98 16.21 40.94 3.01
3158 3356 1.856629 TAAAGGATCCGGTTCCGAGT 58.143 50.000 22.98 15.35 40.94 4.18
3159 3357 2.093869 TGTTAAAGGATCCGGTTCCGAG 60.094 50.000 22.98 3.35 40.94 4.63
3160 3358 1.901159 TGTTAAAGGATCCGGTTCCGA 59.099 47.619 22.98 11.76 40.94 4.55
3161 3359 2.389962 TGTTAAAGGATCCGGTTCCG 57.610 50.000 22.98 4.08 40.94 4.30
3162 3360 6.117488 TCTTAATGTTAAAGGATCCGGTTCC 58.883 40.000 22.05 22.05 35.90 3.62
3163 3361 7.201705 CCTTCTTAATGTTAAAGGATCCGGTTC 60.202 40.741 5.98 1.67 0.00 3.62
3164 3362 6.602009 CCTTCTTAATGTTAAAGGATCCGGTT 59.398 38.462 5.98 7.52 0.00 4.44
3165 3363 6.069847 TCCTTCTTAATGTTAAAGGATCCGGT 60.070 38.462 5.98 0.22 29.21 5.28
3166 3364 6.354130 TCCTTCTTAATGTTAAAGGATCCGG 58.646 40.000 5.98 0.00 29.21 5.14
3167 3365 7.859325 TTCCTTCTTAATGTTAAAGGATCCG 57.141 36.000 5.98 0.00 32.54 4.18
3168 3366 9.190317 ACATTCCTTCTTAATGTTAAAGGATCC 57.810 33.333 2.48 2.48 43.31 3.36
3178 3376 8.325046 AGCTTCTCTAACATTCCTTCTTAATGT 58.675 33.333 0.00 0.00 46.77 2.71
3179 3377 8.729805 AGCTTCTCTAACATTCCTTCTTAATG 57.270 34.615 0.00 0.00 39.68 1.90
3180 3378 9.825109 GTAGCTTCTCTAACATTCCTTCTTAAT 57.175 33.333 0.00 0.00 0.00 1.40
3181 3379 8.812972 TGTAGCTTCTCTAACATTCCTTCTTAA 58.187 33.333 0.00 0.00 0.00 1.85
3182 3380 8.362464 TGTAGCTTCTCTAACATTCCTTCTTA 57.638 34.615 0.00 0.00 0.00 2.10
3183 3381 7.246171 TGTAGCTTCTCTAACATTCCTTCTT 57.754 36.000 0.00 0.00 0.00 2.52
3184 3382 6.859112 TGTAGCTTCTCTAACATTCCTTCT 57.141 37.500 0.00 0.00 0.00 2.85
3185 3383 9.036671 GTATTGTAGCTTCTCTAACATTCCTTC 57.963 37.037 0.00 0.00 0.00 3.46
3186 3384 8.763601 AGTATTGTAGCTTCTCTAACATTCCTT 58.236 33.333 0.00 0.00 0.00 3.36
3187 3385 8.312669 AGTATTGTAGCTTCTCTAACATTCCT 57.687 34.615 0.00 0.00 0.00 3.36
3188 3386 8.417884 AGAGTATTGTAGCTTCTCTAACATTCC 58.582 37.037 0.00 0.00 34.34 3.01
3196 3394 8.471609 GGAAAGTTAGAGTATTGTAGCTTCTCT 58.528 37.037 0.00 0.00 38.69 3.10
3197 3395 8.471609 AGGAAAGTTAGAGTATTGTAGCTTCTC 58.528 37.037 0.00 0.00 0.00 2.87
3198 3396 8.368962 AGGAAAGTTAGAGTATTGTAGCTTCT 57.631 34.615 0.00 0.00 0.00 2.85
3199 3397 9.089601 GAAGGAAAGTTAGAGTATTGTAGCTTC 57.910 37.037 0.00 0.00 0.00 3.86
3200 3398 8.817876 AGAAGGAAAGTTAGAGTATTGTAGCTT 58.182 33.333 0.00 0.00 0.00 3.74
3201 3399 8.368962 AGAAGGAAAGTTAGAGTATTGTAGCT 57.631 34.615 0.00 0.00 0.00 3.32
3202 3400 9.438228 AAAGAAGGAAAGTTAGAGTATTGTAGC 57.562 33.333 0.00 0.00 0.00 3.58
3261 3459 9.467258 CGGTAGATCATCAAATTGCAAATTAAT 57.533 29.630 1.71 0.00 0.00 1.40
3262 3460 8.465999 ACGGTAGATCATCAAATTGCAAATTAA 58.534 29.630 1.71 0.00 0.00 1.40
3263 3461 7.995289 ACGGTAGATCATCAAATTGCAAATTA 58.005 30.769 1.71 0.00 0.00 1.40
3264 3462 6.866480 ACGGTAGATCATCAAATTGCAAATT 58.134 32.000 1.71 0.00 0.00 1.82
3265 3463 6.455360 ACGGTAGATCATCAAATTGCAAAT 57.545 33.333 1.71 0.00 0.00 2.32
3266 3464 5.895636 ACGGTAGATCATCAAATTGCAAA 57.104 34.783 1.71 0.00 0.00 3.68
3267 3465 7.713073 TGTATACGGTAGATCATCAAATTGCAA 59.287 33.333 0.00 0.00 0.00 4.08
3268 3466 7.213678 TGTATACGGTAGATCATCAAATTGCA 58.786 34.615 0.00 0.00 0.00 4.08
3269 3467 7.652300 TGTATACGGTAGATCATCAAATTGC 57.348 36.000 0.00 0.00 0.00 3.56
3302 3500 9.887629 TCACCATCAATTTGTTTGCATATAATT 57.112 25.926 0.00 0.00 35.16 1.40
3303 3501 9.887629 TTCACCATCAATTTGTTTGCATATAAT 57.112 25.926 0.00 0.00 35.16 1.28
3304 3502 9.716531 TTTCACCATCAATTTGTTTGCATATAA 57.283 25.926 0.00 0.00 35.16 0.98
3305 3503 9.887629 ATTTCACCATCAATTTGTTTGCATATA 57.112 25.926 0.00 0.00 35.16 0.86
3306 3504 8.795842 ATTTCACCATCAATTTGTTTGCATAT 57.204 26.923 0.00 0.00 35.16 1.78
3307 3505 9.716531 TTATTTCACCATCAATTTGTTTGCATA 57.283 25.926 0.00 0.00 35.16 3.14
3308 3506 8.618702 TTATTTCACCATCAATTTGTTTGCAT 57.381 26.923 0.00 0.00 35.16 3.96
3309 3507 8.442632 TTTATTTCACCATCAATTTGTTTGCA 57.557 26.923 0.00 0.00 35.16 4.08
3310 3508 9.896263 ATTTTATTTCACCATCAATTTGTTTGC 57.104 25.926 0.00 0.00 35.16 3.68
3358 3556 9.054922 GGTTGTTTAGTGTTGGTATTTACTGTA 57.945 33.333 0.00 0.00 0.00 2.74
3359 3557 7.776500 AGGTTGTTTAGTGTTGGTATTTACTGT 59.224 33.333 0.00 0.00 0.00 3.55
3360 3558 8.161699 AGGTTGTTTAGTGTTGGTATTTACTG 57.838 34.615 0.00 0.00 0.00 2.74
3392 3590 9.765295 AGGAAAGTTAAGGACTGTTAGTAGATA 57.235 33.333 0.00 0.00 39.00 1.98
3393 3591 8.667592 AGGAAAGTTAAGGACTGTTAGTAGAT 57.332 34.615 0.00 0.00 39.00 1.98
3394 3592 8.488308 AAGGAAAGTTAAGGACTGTTAGTAGA 57.512 34.615 0.00 0.00 39.00 2.59
3395 3593 8.586744 AGAAGGAAAGTTAAGGACTGTTAGTAG 58.413 37.037 0.00 0.00 39.00 2.57
3396 3594 8.488308 AGAAGGAAAGTTAAGGACTGTTAGTA 57.512 34.615 0.00 0.00 39.00 1.82
3397 3595 7.376335 AGAAGGAAAGTTAAGGACTGTTAGT 57.624 36.000 0.00 0.00 39.00 2.24
3398 3596 7.931948 TGAAGAAGGAAAGTTAAGGACTGTTAG 59.068 37.037 0.00 0.00 39.00 2.34
3399 3597 7.798071 TGAAGAAGGAAAGTTAAGGACTGTTA 58.202 34.615 0.00 0.00 39.00 2.41
3400 3598 6.659824 TGAAGAAGGAAAGTTAAGGACTGTT 58.340 36.000 0.00 0.00 39.00 3.16
3401 3599 6.248569 TGAAGAAGGAAAGTTAAGGACTGT 57.751 37.500 0.00 0.00 39.00 3.55
3402 3600 7.751768 AATGAAGAAGGAAAGTTAAGGACTG 57.248 36.000 0.00 0.00 39.00 3.51
3403 3601 8.768501 AAAATGAAGAAGGAAAGTTAAGGACT 57.231 30.769 0.00 0.00 41.47 3.85
3404 3602 9.894783 GTAAAATGAAGAAGGAAAGTTAAGGAC 57.105 33.333 0.00 0.00 0.00 3.85
3405 3603 9.635404 TGTAAAATGAAGAAGGAAAGTTAAGGA 57.365 29.630 0.00 0.00 0.00 3.36
3406 3604 9.678941 GTGTAAAATGAAGAAGGAAAGTTAAGG 57.321 33.333 0.00 0.00 0.00 2.69
3410 3608 8.568794 GCTAGTGTAAAATGAAGAAGGAAAGTT 58.431 33.333 0.00 0.00 0.00 2.66
3411 3609 7.175119 GGCTAGTGTAAAATGAAGAAGGAAAGT 59.825 37.037 0.00 0.00 0.00 2.66
3412 3610 7.391833 AGGCTAGTGTAAAATGAAGAAGGAAAG 59.608 37.037 0.00 0.00 0.00 2.62
3413 3611 7.231467 AGGCTAGTGTAAAATGAAGAAGGAAA 58.769 34.615 0.00 0.00 0.00 3.13
3414 3612 6.779860 AGGCTAGTGTAAAATGAAGAAGGAA 58.220 36.000 0.00 0.00 0.00 3.36
3415 3613 6.374417 AGGCTAGTGTAAAATGAAGAAGGA 57.626 37.500 0.00 0.00 0.00 3.36
3416 3614 7.606456 TGTTAGGCTAGTGTAAAATGAAGAAGG 59.394 37.037 0.00 0.00 0.00 3.46
3417 3615 8.443937 GTGTTAGGCTAGTGTAAAATGAAGAAG 58.556 37.037 0.00 0.00 0.00 2.85
3418 3616 8.154856 AGTGTTAGGCTAGTGTAAAATGAAGAA 58.845 33.333 0.00 0.00 0.00 2.52
3419 3617 7.602644 CAGTGTTAGGCTAGTGTAAAATGAAGA 59.397 37.037 0.00 0.00 0.00 2.87
3420 3618 7.387948 ACAGTGTTAGGCTAGTGTAAAATGAAG 59.612 37.037 0.00 0.00 0.00 3.02
3421 3619 7.221450 ACAGTGTTAGGCTAGTGTAAAATGAA 58.779 34.615 0.00 0.00 0.00 2.57
3422 3620 6.765403 ACAGTGTTAGGCTAGTGTAAAATGA 58.235 36.000 0.00 0.00 0.00 2.57
3423 3621 7.201530 GCTACAGTGTTAGGCTAGTGTAAAATG 60.202 40.741 0.00 0.00 33.64 2.32
3424 3622 6.817140 GCTACAGTGTTAGGCTAGTGTAAAAT 59.183 38.462 0.00 0.00 33.64 1.82
3425 3623 6.161381 GCTACAGTGTTAGGCTAGTGTAAAA 58.839 40.000 0.00 0.00 33.64 1.52
3426 3624 5.244402 TGCTACAGTGTTAGGCTAGTGTAAA 59.756 40.000 0.00 0.00 33.64 2.01
3427 3625 4.768448 TGCTACAGTGTTAGGCTAGTGTAA 59.232 41.667 0.00 0.00 33.64 2.41
3428 3626 4.157289 GTGCTACAGTGTTAGGCTAGTGTA 59.843 45.833 0.00 0.00 32.96 2.90
3429 3627 3.056749 GTGCTACAGTGTTAGGCTAGTGT 60.057 47.826 0.00 2.11 34.94 3.55
3430 3628 3.512680 GTGCTACAGTGTTAGGCTAGTG 58.487 50.000 0.00 0.00 0.00 2.74
3431 3629 2.163815 CGTGCTACAGTGTTAGGCTAGT 59.836 50.000 0.00 0.00 0.00 2.57
3432 3630 2.479730 CCGTGCTACAGTGTTAGGCTAG 60.480 54.545 0.00 0.00 0.00 3.42
3433 3631 1.475280 CCGTGCTACAGTGTTAGGCTA 59.525 52.381 0.00 0.00 0.00 3.93
3434 3632 0.246635 CCGTGCTACAGTGTTAGGCT 59.753 55.000 0.00 0.00 0.00 4.58
3435 3633 0.037605 ACCGTGCTACAGTGTTAGGC 60.038 55.000 0.00 4.87 0.00 3.93
3436 3634 1.271379 TCACCGTGCTACAGTGTTAGG 59.729 52.381 0.00 0.89 33.21 2.69
3437 3635 2.287970 TGTCACCGTGCTACAGTGTTAG 60.288 50.000 0.00 0.00 33.21 2.34
3438 3636 1.682323 TGTCACCGTGCTACAGTGTTA 59.318 47.619 0.00 0.00 33.21 2.41
3439 3637 0.462375 TGTCACCGTGCTACAGTGTT 59.538 50.000 0.00 0.00 33.21 3.32
3440 3638 0.679505 ATGTCACCGTGCTACAGTGT 59.320 50.000 0.00 0.00 33.21 3.55
3441 3639 1.726791 GAATGTCACCGTGCTACAGTG 59.273 52.381 0.00 0.00 0.00 3.66
3442 3640 1.337823 GGAATGTCACCGTGCTACAGT 60.338 52.381 0.00 0.00 0.00 3.55
3443 3641 1.066858 AGGAATGTCACCGTGCTACAG 60.067 52.381 0.00 0.00 0.00 2.74
3444 3642 0.973632 AGGAATGTCACCGTGCTACA 59.026 50.000 0.00 0.00 0.00 2.74
3445 3643 2.000447 GAAGGAATGTCACCGTGCTAC 59.000 52.381 0.00 0.00 0.00 3.58
3446 3644 1.899814 AGAAGGAATGTCACCGTGCTA 59.100 47.619 0.00 0.00 0.00 3.49
3447 3645 0.687354 AGAAGGAATGTCACCGTGCT 59.313 50.000 0.00 0.00 0.00 4.40
3448 3646 1.079503 GAGAAGGAATGTCACCGTGC 58.920 55.000 0.00 0.00 0.00 5.34
3449 3647 2.455674 TGAGAAGGAATGTCACCGTG 57.544 50.000 0.00 0.00 0.00 4.94
3450 3648 3.244561 ACATTGAGAAGGAATGTCACCGT 60.245 43.478 0.00 0.00 39.34 4.83
3451 3649 3.338249 ACATTGAGAAGGAATGTCACCG 58.662 45.455 0.00 0.00 39.34 4.94
3452 3650 6.173339 TCTAACATTGAGAAGGAATGTCACC 58.827 40.000 0.00 0.00 42.04 4.02
3453 3651 6.314896 CCTCTAACATTGAGAAGGAATGTCAC 59.685 42.308 0.00 0.00 42.04 3.67
3454 3652 6.213397 TCCTCTAACATTGAGAAGGAATGTCA 59.787 38.462 0.00 0.00 42.04 3.58
3455 3653 6.644347 TCCTCTAACATTGAGAAGGAATGTC 58.356 40.000 0.00 0.00 42.04 3.06
3456 3654 6.627087 TCCTCTAACATTGAGAAGGAATGT 57.373 37.500 0.00 0.00 44.21 2.71
3457 3655 6.709846 GGATCCTCTAACATTGAGAAGGAATG 59.290 42.308 3.84 0.00 36.94 2.67
3458 3656 6.463614 CGGATCCTCTAACATTGAGAAGGAAT 60.464 42.308 10.75 0.00 33.68 3.01
3459 3657 5.163405 CGGATCCTCTAACATTGAGAAGGAA 60.163 44.000 10.75 0.00 33.68 3.36
3460 3658 4.342378 CGGATCCTCTAACATTGAGAAGGA 59.658 45.833 10.75 0.00 33.68 3.36
3461 3659 4.502259 CCGGATCCTCTAACATTGAGAAGG 60.502 50.000 10.75 0.00 33.68 3.46
3462 3660 4.100189 ACCGGATCCTCTAACATTGAGAAG 59.900 45.833 9.46 0.00 33.68 2.85
3463 3661 4.030913 ACCGGATCCTCTAACATTGAGAA 58.969 43.478 9.46 0.00 33.68 2.87
3464 3662 3.643237 ACCGGATCCTCTAACATTGAGA 58.357 45.455 9.46 0.00 33.68 3.27
3465 3663 4.372656 GAACCGGATCCTCTAACATTGAG 58.627 47.826 9.46 0.00 0.00 3.02
3466 3664 3.134081 GGAACCGGATCCTCTAACATTGA 59.866 47.826 22.87 0.00 36.50 2.57
3467 3665 3.467803 GGAACCGGATCCTCTAACATTG 58.532 50.000 22.87 0.00 36.50 2.82
3468 3666 2.438392 GGGAACCGGATCCTCTAACATT 59.562 50.000 27.91 0.00 40.86 2.71
3469 3667 2.047830 GGGAACCGGATCCTCTAACAT 58.952 52.381 27.91 0.00 40.86 2.71
3470 3668 1.492764 GGGAACCGGATCCTCTAACA 58.507 55.000 27.91 0.00 40.86 2.41
3485 3683 2.158475 AGCCATGTTGAGTTCAAGGGAA 60.158 45.455 9.90 0.00 36.39 3.97
3486 3684 1.425066 AGCCATGTTGAGTTCAAGGGA 59.575 47.619 9.90 0.00 36.39 4.20
3487 3685 1.542915 CAGCCATGTTGAGTTCAAGGG 59.457 52.381 0.00 0.00 36.39 3.95
3526 3724 6.924111 AGCCCAAATTTATGTAAGTGAAGTG 58.076 36.000 0.00 0.00 0.00 3.16
3566 3766 0.528033 CAGCAGCATCTCCAGACTCG 60.528 60.000 0.00 0.00 0.00 4.18
3586 3786 1.686587 TCTAGTGCCATATCGGTGTGG 59.313 52.381 7.17 7.17 39.45 4.17
3587 3787 3.452755 TTCTAGTGCCATATCGGTGTG 57.547 47.619 0.00 0.00 36.97 3.82
3588 3788 3.196901 TGTTTCTAGTGCCATATCGGTGT 59.803 43.478 0.00 0.00 36.97 4.16
3589 3789 3.555956 GTGTTTCTAGTGCCATATCGGTG 59.444 47.826 0.00 0.00 36.97 4.94
3590 3790 3.196901 TGTGTTTCTAGTGCCATATCGGT 59.803 43.478 0.00 0.00 36.97 4.69
3591 3791 3.792401 TGTGTTTCTAGTGCCATATCGG 58.208 45.455 0.00 0.00 38.11 4.18
3592 3792 7.600375 AGATTATGTGTTTCTAGTGCCATATCG 59.400 37.037 0.00 0.00 0.00 2.92
3593 3793 8.839310 AGATTATGTGTTTCTAGTGCCATATC 57.161 34.615 0.00 0.00 0.00 1.63
3594 3794 9.060347 CAAGATTATGTGTTTCTAGTGCCATAT 57.940 33.333 0.00 0.00 0.00 1.78
3595 3795 7.012327 GCAAGATTATGTGTTTCTAGTGCCATA 59.988 37.037 0.00 0.00 0.00 2.74
3596 3796 6.183360 GCAAGATTATGTGTTTCTAGTGCCAT 60.183 38.462 0.00 0.00 0.00 4.40
3597 3797 5.123820 GCAAGATTATGTGTTTCTAGTGCCA 59.876 40.000 0.00 0.00 0.00 4.92
3598 3798 5.355350 AGCAAGATTATGTGTTTCTAGTGCC 59.645 40.000 0.00 0.00 0.00 5.01
3599 3799 6.428385 AGCAAGATTATGTGTTTCTAGTGC 57.572 37.500 0.00 0.00 0.00 4.40
3600 3800 8.598924 CACTAGCAAGATTATGTGTTTCTAGTG 58.401 37.037 11.73 11.73 42.42 2.74
3601 3801 7.278868 GCACTAGCAAGATTATGTGTTTCTAGT 59.721 37.037 0.00 0.00 41.58 2.57
3602 3802 7.493971 AGCACTAGCAAGATTATGTGTTTCTAG 59.506 37.037 0.00 0.00 45.49 2.43
3603 3803 7.331026 AGCACTAGCAAGATTATGTGTTTCTA 58.669 34.615 0.00 0.00 45.49 2.10
3604 3804 6.176183 AGCACTAGCAAGATTATGTGTTTCT 58.824 36.000 0.00 0.00 45.49 2.52
3605 3805 6.314896 AGAGCACTAGCAAGATTATGTGTTTC 59.685 38.462 0.00 0.00 45.49 2.78
3606 3806 6.176183 AGAGCACTAGCAAGATTATGTGTTT 58.824 36.000 0.00 0.00 45.49 2.83
3607 3807 5.738909 AGAGCACTAGCAAGATTATGTGTT 58.261 37.500 0.00 0.00 45.49 3.32
3608 3808 5.350504 AGAGCACTAGCAAGATTATGTGT 57.649 39.130 0.00 0.00 45.49 3.72
3766 3980 4.383173 TCTTTTCCAGGTTTTCTACGACC 58.617 43.478 0.00 0.00 36.15 4.79
4028 4244 4.569180 ATGGAATCCGGCCAGGCG 62.569 66.667 5.00 6.64 39.11 5.52
4432 4670 1.226974 CACGTACCAGATGGCGAGG 60.227 63.158 0.00 0.00 39.32 4.63
4582 4820 3.058016 ACTCACAACATTCAATTCCAGCG 60.058 43.478 0.00 0.00 0.00 5.18
4591 4829 4.717233 AGCAACAAACTCACAACATTCA 57.283 36.364 0.00 0.00 0.00 2.57
4618 4856 2.034687 CCACTCCACTGGCCCAAG 59.965 66.667 0.00 0.00 0.00 3.61
4619 4857 2.449518 TCCACTCCACTGGCCCAA 60.450 61.111 0.00 0.00 0.00 4.12
4620 4858 2.930019 CTCCACTCCACTGGCCCA 60.930 66.667 0.00 0.00 0.00 5.36
4621 4859 4.416738 GCTCCACTCCACTGGCCC 62.417 72.222 0.00 0.00 0.00 5.80
4622 4860 4.767255 CGCTCCACTCCACTGGCC 62.767 72.222 0.00 0.00 0.00 5.36
4623 4861 4.767255 CCGCTCCACTCCACTGGC 62.767 72.222 0.00 0.00 0.00 4.85
4624 4862 4.767255 GCCGCTCCACTCCACTGG 62.767 72.222 0.00 0.00 0.00 4.00
4639 4877 1.639280 CAAACACACACACAAAGGCC 58.361 50.000 0.00 0.00 0.00 5.19
4767 5008 2.584835 TGATAACAGCTGGGCAGTTT 57.415 45.000 19.93 4.36 38.98 2.66
4803 5044 2.298610 TGGATACACACGCACCAAAAA 58.701 42.857 0.00 0.00 46.17 1.94
4805 5046 3.708013 TGGATACACACGCACCAAA 57.292 47.368 0.00 0.00 46.17 3.28
4817 5058 2.676342 GGTGGAACGTGTTGATGGATAC 59.324 50.000 0.00 0.00 38.12 2.24
4818 5059 2.303311 TGGTGGAACGTGTTGATGGATA 59.697 45.455 0.00 0.00 38.12 2.59
4819 5060 1.073125 TGGTGGAACGTGTTGATGGAT 59.927 47.619 0.00 0.00 38.12 3.41
4820 5061 0.470341 TGGTGGAACGTGTTGATGGA 59.530 50.000 0.00 0.00 38.12 3.41
4821 5062 1.266718 CTTGGTGGAACGTGTTGATGG 59.733 52.381 0.00 0.00 38.12 3.51
4841 5095 1.873270 AAAAAGATTGCGTCCGCCCC 61.873 55.000 9.43 0.00 41.09 5.80
4845 5099 5.225129 CGATCTTTTAAAAAGATTGCGTCCG 59.775 40.000 0.00 0.00 37.14 4.79
4846 5100 6.540323 CGATCTTTTAAAAAGATTGCGTCC 57.460 37.500 0.00 0.00 37.14 4.79
4851 5105 4.798387 CCGGGCGATCTTTTAAAAAGATTG 59.202 41.667 4.46 4.46 39.86 2.67
4852 5106 4.142249 CCCGGGCGATCTTTTAAAAAGATT 60.142 41.667 8.08 0.00 37.14 2.40
4855 5123 2.490509 ACCCGGGCGATCTTTTAAAAAG 59.509 45.455 24.08 0.00 0.00 2.27
4861 5129 2.340328 GCAACCCGGGCGATCTTTT 61.340 57.895 24.08 1.42 0.00 2.27
4862 5130 2.750237 GCAACCCGGGCGATCTTT 60.750 61.111 24.08 2.35 0.00 2.52
4865 5133 3.508840 CTTGCAACCCGGGCGATC 61.509 66.667 24.08 8.15 0.00 3.69
4873 5141 1.648467 GATCTGACGGCTTGCAACCC 61.648 60.000 0.19 0.19 0.00 4.11
4880 5148 1.078848 GCACCAGATCTGACGGCTT 60.079 57.895 24.62 0.00 0.00 4.35
4884 5152 0.101219 TCGATGCACCAGATCTGACG 59.899 55.000 24.62 14.77 0.00 4.35
4887 5155 1.213733 CGCTCGATGCACCAGATCTG 61.214 60.000 16.24 16.24 43.06 2.90
4888 5156 1.067084 CGCTCGATGCACCAGATCT 59.933 57.895 0.00 0.00 43.06 2.75
4889 5157 1.211818 GACGCTCGATGCACCAGATC 61.212 60.000 0.00 0.00 43.06 2.75
4890 5158 1.227089 GACGCTCGATGCACCAGAT 60.227 57.895 0.00 0.00 43.06 2.90
4891 5159 2.181777 GACGCTCGATGCACCAGA 59.818 61.111 0.00 0.00 43.06 3.86
4892 5160 2.887568 GGACGCTCGATGCACCAG 60.888 66.667 0.00 0.00 43.06 4.00
4893 5161 3.233259 TTGGACGCTCGATGCACCA 62.233 57.895 13.92 13.92 42.69 4.17
4894 5162 2.434185 TTGGACGCTCGATGCACC 60.434 61.111 0.00 9.26 43.06 5.01
4896 5164 1.153765 CTCTTGGACGCTCGATGCA 60.154 57.895 0.00 0.00 43.06 3.96
4897 5165 0.869454 CTCTCTTGGACGCTCGATGC 60.869 60.000 0.00 0.00 38.57 3.91
4898 5166 0.735471 TCTCTCTTGGACGCTCGATG 59.265 55.000 0.00 0.00 0.00 3.84
4900 5168 1.027255 CCTCTCTCTTGGACGCTCGA 61.027 60.000 0.00 0.00 0.00 4.04
4902 5170 1.671901 CCCCTCTCTCTTGGACGCTC 61.672 65.000 0.00 0.00 0.00 5.03
4903 5171 1.684049 CCCCTCTCTCTTGGACGCT 60.684 63.158 0.00 0.00 0.00 5.07
4904 5172 0.683504 TACCCCTCTCTCTTGGACGC 60.684 60.000 0.00 0.00 0.00 5.19
4905 5173 1.477295 GTTACCCCTCTCTCTTGGACG 59.523 57.143 0.00 0.00 0.00 4.79
4906 5174 1.477295 CGTTACCCCTCTCTCTTGGAC 59.523 57.143 0.00 0.00 0.00 4.02
4907 5175 1.356738 TCGTTACCCCTCTCTCTTGGA 59.643 52.381 0.00 0.00 0.00 3.53
4908 5176 1.751924 CTCGTTACCCCTCTCTCTTGG 59.248 57.143 0.00 0.00 0.00 3.61
4909 5177 2.685897 CTCTCGTTACCCCTCTCTCTTG 59.314 54.545 0.00 0.00 0.00 3.02
4910 5178 2.577105 TCTCTCGTTACCCCTCTCTCTT 59.423 50.000 0.00 0.00 0.00 2.85
4911 5179 2.171870 CTCTCTCGTTACCCCTCTCTCT 59.828 54.545 0.00 0.00 0.00 3.10
4912 5180 2.567985 CTCTCTCGTTACCCCTCTCTC 58.432 57.143 0.00 0.00 0.00 3.20
4914 5182 1.212441 TCCTCTCTCGTTACCCCTCTC 59.788 57.143 0.00 0.00 0.00 3.20
4915 5183 1.213430 CTCCTCTCTCGTTACCCCTCT 59.787 57.143 0.00 0.00 0.00 3.69
4916 5184 1.212441 TCTCCTCTCTCGTTACCCCTC 59.788 57.143 0.00 0.00 0.00 4.30
4925 5833 1.064314 TCCTTCCCTTCTCCTCTCTCG 60.064 57.143 0.00 0.00 0.00 4.04
4928 5836 2.838637 TCTCCTTCCCTTCTCCTCTC 57.161 55.000 0.00 0.00 0.00 3.20
4936 5844 0.103337 ACCCCCTTTCTCCTTCCCTT 60.103 55.000 0.00 0.00 0.00 3.95
4955 5863 4.308458 CAAGGACACCGCCACCGA 62.308 66.667 0.00 0.00 36.29 4.69
4965 5873 2.525629 TCACCCCGCTCAAGGACA 60.526 61.111 0.00 0.00 0.00 4.02
4972 5880 1.826921 TACGATCCTCACCCCGCTC 60.827 63.158 0.00 0.00 0.00 5.03
4973 5881 2.125961 GTACGATCCTCACCCCGCT 61.126 63.158 0.00 0.00 0.00 5.52
4980 5888 1.065551 CAGATGCACGTACGATCCTCA 59.934 52.381 24.41 11.59 0.00 3.86
4983 5891 1.588404 CAACAGATGCACGTACGATCC 59.412 52.381 24.41 9.79 0.00 3.36
5014 5922 1.213182 TCTCATCTAGAGTCGCCACCT 59.787 52.381 0.00 0.00 44.98 4.00
5034 5942 4.742012 TCTTCACTTTCTCCCTACTGACT 58.258 43.478 0.00 0.00 0.00 3.41
5035 5943 5.669164 ATCTTCACTTTCTCCCTACTGAC 57.331 43.478 0.00 0.00 0.00 3.51
5036 5944 5.046304 CCAATCTTCACTTTCTCCCTACTGA 60.046 44.000 0.00 0.00 0.00 3.41
5037 5945 5.181748 CCAATCTTCACTTTCTCCCTACTG 58.818 45.833 0.00 0.00 0.00 2.74
5038 5946 4.323868 GCCAATCTTCACTTTCTCCCTACT 60.324 45.833 0.00 0.00 0.00 2.57
5039 5947 3.942115 GCCAATCTTCACTTTCTCCCTAC 59.058 47.826 0.00 0.00 0.00 3.18
5040 5948 3.846588 AGCCAATCTTCACTTTCTCCCTA 59.153 43.478 0.00 0.00 0.00 3.53
5055 5963 2.294233 TGTTTCTCAACAGCAGCCAATC 59.706 45.455 0.00 0.00 38.03 2.67
5060 5968 2.355756 TCACTTGTTTCTCAACAGCAGC 59.644 45.455 0.00 0.00 43.92 5.25
5064 5972 5.505173 ACCATTCACTTGTTTCTCAACAG 57.495 39.130 0.00 0.00 43.92 3.16
5080 5988 4.644685 ACTCTTCTCTCTCAGCTACCATTC 59.355 45.833 0.00 0.00 0.00 2.67
5087 5995 3.938963 CTCGTTACTCTTCTCTCTCAGCT 59.061 47.826 0.00 0.00 0.00 4.24
5103 6011 5.243060 TGTCTCCAAGAAATCTGTCTCGTTA 59.757 40.000 0.00 0.00 0.00 3.18
5106 6014 4.179926 TGTCTCCAAGAAATCTGTCTCG 57.820 45.455 0.00 0.00 0.00 4.04
5111 6019 5.023551 GACGTTTGTCTCCAAGAAATCTG 57.976 43.478 0.00 0.00 42.08 2.90
5135 6043 4.175962 TCCTTGTTGAACCTTATCTCCCT 58.824 43.478 0.00 0.00 0.00 4.20
5136 6044 4.569719 TCCTTGTTGAACCTTATCTCCC 57.430 45.455 0.00 0.00 0.00 4.30
5137 6045 5.501156 ACATCCTTGTTGAACCTTATCTCC 58.499 41.667 0.00 0.00 29.55 3.71
5151 6059 4.848357 CCCTATGAGTGAAACATCCTTGT 58.152 43.478 0.00 0.00 41.43 3.16
5155 6063 3.567478 AGCCCTATGAGTGAAACATCC 57.433 47.619 0.00 0.00 41.43 3.51
5194 6103 6.869421 ACACAAATCTTGACAAAAGTTTCG 57.131 33.333 0.00 0.00 0.00 3.46
5197 6106 7.961325 AACAACACAAATCTTGACAAAAGTT 57.039 28.000 0.00 0.00 0.00 2.66
5198 6107 7.961325 AAACAACACAAATCTTGACAAAAGT 57.039 28.000 0.00 0.00 0.00 2.66
5219 6128 6.422701 GCCTAAACCCACACAAGAATAAAAAC 59.577 38.462 0.00 0.00 0.00 2.43
5224 6133 4.042311 TCAGCCTAAACCCACACAAGAATA 59.958 41.667 0.00 0.00 0.00 1.75
5225 6134 3.157087 CAGCCTAAACCCACACAAGAAT 58.843 45.455 0.00 0.00 0.00 2.40
5226 6135 2.173782 TCAGCCTAAACCCACACAAGAA 59.826 45.455 0.00 0.00 0.00 2.52
5271 6180 8.349983 TCAGGCTAAGAACAAAAATTGACTTAC 58.650 33.333 0.00 3.20 34.72 2.34
5272 6181 8.458573 TCAGGCTAAGAACAAAAATTGACTTA 57.541 30.769 0.00 5.94 34.72 2.24
5273 6182 7.346751 TCAGGCTAAGAACAAAAATTGACTT 57.653 32.000 0.00 5.20 35.99 3.01
5274 6183 6.959639 TCAGGCTAAGAACAAAAATTGACT 57.040 33.333 0.00 0.00 0.00 3.41
5342 6251 4.143543 ACAGGGGCAAATCAAAATTTTGG 58.856 39.130 26.45 13.99 38.66 3.28
5347 6256 2.028203 CCGAACAGGGGCAAATCAAAAT 60.028 45.455 0.00 0.00 35.97 1.82
5351 6260 0.178975 AACCGAACAGGGGCAAATCA 60.179 50.000 0.00 0.00 46.96 2.57
5354 6263 1.133730 ACTTAACCGAACAGGGGCAAA 60.134 47.619 0.00 0.00 46.96 3.68
5363 6272 5.648033 AAGAAAAGTCGACTTAACCGAAC 57.352 39.130 29.91 15.42 37.81 3.95
5366 6275 4.091075 GCCTAAGAAAAGTCGACTTAACCG 59.909 45.833 29.91 15.83 34.61 4.44
5369 6278 7.224522 AGTAGCCTAAGAAAAGTCGACTTAA 57.775 36.000 29.91 12.80 34.61 1.85
5370 6279 6.830873 AGTAGCCTAAGAAAAGTCGACTTA 57.169 37.500 29.91 13.85 34.61 2.24
5371 6280 5.725325 AGTAGCCTAAGAAAAGTCGACTT 57.275 39.130 24.93 24.93 37.91 3.01
5373 6282 6.782298 AAAAGTAGCCTAAGAAAAGTCGAC 57.218 37.500 7.70 7.70 0.00 4.20
5374 6283 6.987992 TCAAAAAGTAGCCTAAGAAAAGTCGA 59.012 34.615 0.00 0.00 0.00 4.20
5375 6284 7.041984 AGTCAAAAAGTAGCCTAAGAAAAGTCG 60.042 37.037 0.00 0.00 0.00 4.18
5376 6285 8.155821 AGTCAAAAAGTAGCCTAAGAAAAGTC 57.844 34.615 0.00 0.00 0.00 3.01
5377 6286 7.041984 CGAGTCAAAAAGTAGCCTAAGAAAAGT 60.042 37.037 0.00 0.00 0.00 2.66
5390 6301 1.418637 ACAGGGGCGAGTCAAAAAGTA 59.581 47.619 0.00 0.00 0.00 2.24
5419 6331 5.738693 GCAAAGAAGCAACAAAAATTTGACC 59.261 36.000 12.54 1.15 40.55 4.02
5420 6332 5.738693 GGCAAAGAAGCAACAAAAATTTGAC 59.261 36.000 12.54 2.39 37.67 3.18
5463 6383 5.585820 AAAGAAAACCGGCTAAACAAAGA 57.414 34.783 0.00 0.00 0.00 2.52
5464 6384 6.533723 AGAAAAAGAAAACCGGCTAAACAAAG 59.466 34.615 0.00 0.00 0.00 2.77
5467 6387 5.585820 AGAAAAAGAAAACCGGCTAAACA 57.414 34.783 0.00 0.00 0.00 2.83
5468 6388 6.897259 AAAGAAAAAGAAAACCGGCTAAAC 57.103 33.333 0.00 0.00 0.00 2.01
5522 6442 6.970484 ACTGAATGTTTACATTTCCACTCAC 58.030 36.000 9.30 0.00 45.72 3.51



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.