Multiple sequence alignment - TraesCS2A01G441900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G441900 chr2A 100.000 4470 0 0 1 4470 691850265 691845796 0.000000e+00 8255.0
1 TraesCS2A01G441900 chr2D 96.162 1355 44 1 1 1355 549731925 549730579 0.000000e+00 2207.0
2 TraesCS2A01G441900 chr2D 95.947 1357 44 3 1 1355 550230459 550229112 0.000000e+00 2191.0
3 TraesCS2A01G441900 chr2D 90.623 1365 101 13 2 1354 549920860 549919511 0.000000e+00 1786.0
4 TraesCS2A01G441900 chr2D 90.029 1364 108 11 2 1354 550670893 550672239 0.000000e+00 1740.0
5 TraesCS2A01G441900 chr2D 90.533 1331 94 9 1 1311 551142871 551141553 0.000000e+00 1731.0
6 TraesCS2A01G441900 chr2D 85.792 549 42 12 3295 3831 549730170 549729646 2.350000e-152 549.0
7 TraesCS2A01G441900 chr2D 85.792 549 42 12 3295 3831 550228703 550228179 2.350000e-152 549.0
8 TraesCS2A01G441900 chr2D 92.605 311 23 0 2983 3293 76640433 76640743 8.820000e-122 448.0
9 TraesCS2A01G441900 chr2D 85.063 395 26 14 3825 4192 549019715 549019327 5.460000e-99 372.0
10 TraesCS2A01G441900 chr2D 87.948 307 25 7 3331 3625 549919051 549918745 7.110000e-93 351.0
11 TraesCS2A01G441900 chr2D 89.496 238 22 1 3354 3588 550672728 550672965 9.400000e-77 298.0
12 TraesCS2A01G441900 chr2D 94.972 179 8 1 4292 4470 549016666 549016489 3.400000e-71 279.0
13 TraesCS2A01G441900 chr2D 83.882 304 26 11 4185 4470 550227924 550227626 7.370000e-68 268.0
14 TraesCS2A01G441900 chr2D 95.266 169 8 0 2627 2795 550229106 550228938 7.370000e-68 268.0
15 TraesCS2A01G441900 chr2D 94.675 169 9 0 2627 2795 549730573 549730405 3.430000e-66 263.0
16 TraesCS2A01G441900 chr2D 83.224 304 28 11 4185 4470 549729391 549729093 1.600000e-64 257.0
17 TraesCS2A01G441900 chr2D 90.503 179 16 1 2813 2990 549730345 549730167 7.480000e-58 235.0
18 TraesCS2A01G441900 chr2D 90.503 179 16 1 2813 2990 550228878 550228700 7.480000e-58 235.0
19 TraesCS2A01G441900 chr2D 93.162 117 8 0 3925 4041 549729552 549729436 5.940000e-39 172.0
20 TraesCS2A01G441900 chr2D 93.162 117 8 0 3925 4041 550228085 550227969 5.940000e-39 172.0
21 TraesCS2A01G441900 chr2D 82.326 215 14 12 3628 3837 549019949 549019754 9.950000e-37 165.0
22 TraesCS2A01G441900 chr2D 80.102 196 24 8 2803 2986 549919286 549919094 1.010000e-26 132.0
23 TraesCS2A01G441900 chr2D 79.695 197 25 10 2803 2987 550672461 550672654 1.310000e-25 128.0
24 TraesCS2A01G441900 chr2D 86.022 93 10 1 1267 1356 551141555 551141463 3.680000e-16 97.1
25 TraesCS2A01G441900 chr2B 95.646 1355 48 2 1 1355 655990643 655989300 0.000000e+00 2165.0
26 TraesCS2A01G441900 chr2B 90.609 1363 103 11 3 1354 656230300 656228952 0.000000e+00 1784.0
27 TraesCS2A01G441900 chr2B 89.678 1366 118 9 1 1356 656352792 656351440 0.000000e+00 1720.0
28 TraesCS2A01G441900 chr2B 82.874 689 44 27 3825 4468 655988377 655987718 6.530000e-153 551.0
29 TraesCS2A01G441900 chr2B 92.308 312 22 2 2983 3293 96383153 96383463 4.100000e-120 442.0
30 TraesCS2A01G441900 chr2B 87.667 300 27 6 3295 3588 655988890 655988595 1.540000e-89 340.0
31 TraesCS2A01G441900 chr2B 94.083 169 10 0 2627 2795 655989294 655989126 1.600000e-64 257.0
32 TraesCS2A01G441900 chr2B 88.679 212 22 1 3346 3557 656228509 656228300 1.600000e-64 257.0
33 TraesCS2A01G441900 chr2B 86.522 230 26 4 1353 1580 694693056 694693282 9.600000e-62 248.0
34 TraesCS2A01G441900 chr2B 91.209 182 15 1 2810 2990 655989068 655988887 3.450000e-61 246.0
35 TraesCS2A01G441900 chr2B 85.586 222 25 5 1361 1580 150586145 150586361 4.500000e-55 226.0
36 TraesCS2A01G441900 chr2B 84.492 187 25 4 2803 2986 656351208 656351023 9.880000e-42 182.0
37 TraesCS2A01G441900 chr2B 85.393 178 10 3 3660 3837 655988577 655988416 2.140000e-38 171.0
38 TraesCS2A01G441900 chr2B 86.170 94 2 5 3671 3761 656228268 656228183 1.710000e-14 91.6
39 TraesCS2A01G441900 chr1D 88.698 1283 107 22 1361 2611 208181887 208180611 0.000000e+00 1531.0
40 TraesCS2A01G441900 chr1D 92.038 314 25 0 2983 3296 313817027 313817340 4.100000e-120 442.0
41 TraesCS2A01G441900 chr1D 91.824 318 24 2 2984 3299 481830730 481831047 4.100000e-120 442.0
42 TraesCS2A01G441900 chr5D 89.058 1252 98 25 1408 2625 396426080 396427326 0.000000e+00 1517.0
43 TraesCS2A01G441900 chr5D 87.803 1115 125 3 1 1112 395930017 395931123 0.000000e+00 1295.0
44 TraesCS2A01G441900 chr3A 88.106 1278 114 17 1361 2625 692985196 692983944 0.000000e+00 1483.0
45 TraesCS2A01G441900 chr3A 86.919 1269 107 26 1408 2625 623604320 623603060 0.000000e+00 1369.0
46 TraesCS2A01G441900 chr3A 85.328 1220 127 21 1408 2592 653908957 653907755 0.000000e+00 1214.0
47 TraesCS2A01G441900 chr3A 87.358 965 76 18 1355 2319 655634585 655635503 0.000000e+00 1064.0
48 TraesCS2A01G441900 chr3A 91.562 320 25 1 2974 3293 22440530 22440213 1.480000e-119 440.0
49 TraesCS2A01G441900 chrUn 92.070 1034 68 7 1603 2625 21561298 21562328 0.000000e+00 1443.0
50 TraesCS2A01G441900 chrUn 94.724 417 14 1 902 1318 477873767 477874175 3.770000e-180 641.0
51 TraesCS2A01G441900 chr3D 90.313 1053 69 13 1583 2625 140787085 140788114 0.000000e+00 1349.0
52 TraesCS2A01G441900 chr6A 90.918 1002 79 8 1361 2353 84692365 84691367 0.000000e+00 1336.0
53 TraesCS2A01G441900 chr6A 92.880 309 21 1 2988 3295 140091640 140091948 8.820000e-122 448.0
54 TraesCS2A01G441900 chr5A 89.128 1067 94 15 1585 2632 394569443 394568380 0.000000e+00 1308.0
55 TraesCS2A01G441900 chr5A 90.000 230 15 3 4185 4412 504574118 504573895 1.570000e-74 291.0
56 TraesCS2A01G441900 chr5A 79.655 290 22 13 3825 4087 504574651 504574372 1.650000e-39 174.0
57 TraesCS2A01G441900 chr5A 82.326 215 15 11 3628 3837 504574886 504574690 9.950000e-37 165.0
58 TraesCS2A01G441900 chr1A 88.104 1076 98 19 1576 2628 381303781 381302713 0.000000e+00 1251.0
59 TraesCS2A01G441900 chr1A 87.895 727 57 17 1537 2244 516374436 516373722 0.000000e+00 826.0
60 TraesCS2A01G441900 chr1A 92.581 310 23 0 2984 3293 114599630 114599939 3.170000e-121 446.0
61 TraesCS2A01G441900 chr7D 82.642 1325 161 44 1357 2625 35946376 35947687 0.000000e+00 1109.0
62 TraesCS2A01G441900 chr7D 93.160 307 21 0 2987 3293 444357230 444356924 6.820000e-123 451.0
63 TraesCS2A01G441900 chr7D 92.398 171 9 3 1361 1531 71621354 71621188 1.610000e-59 241.0
64 TraesCS2A01G441900 chr6D 86.519 497 48 13 1361 1841 107534913 107534420 3.060000e-146 529.0
65 TraesCS2A01G441900 chr6D 92.557 309 22 1 2985 3292 123976408 123976716 4.100000e-120 442.0
66 TraesCS2A01G441900 chr3B 86.404 228 26 4 1355 1580 534230875 534231099 1.240000e-60 244.0
67 TraesCS2A01G441900 chr3B 84.753 223 27 4 1361 1581 61541841 61541624 2.710000e-52 217.0
68 TraesCS2A01G441900 chr7B 85.586 222 27 4 1361 1580 505462058 505462276 1.250000e-55 228.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G441900 chr2A 691845796 691850265 4469 True 8255.000000 8255 100.000000 1 4470 1 chr2A.!!$R1 4469
1 TraesCS2A01G441900 chr2D 551141463 551142871 1408 True 914.050000 1731 88.277500 1 1356 2 chr2D.!!$R5 1355
2 TraesCS2A01G441900 chr2D 549918745 549920860 2115 True 756.333333 1786 86.224333 2 3625 3 chr2D.!!$R3 3623
3 TraesCS2A01G441900 chr2D 550670893 550672965 2072 False 722.000000 1740 86.406667 2 3588 3 chr2D.!!$F2 3586
4 TraesCS2A01G441900 chr2D 549729093 549731925 2832 True 613.833333 2207 90.586333 1 4470 6 chr2D.!!$R2 4469
5 TraesCS2A01G441900 chr2D 550227626 550230459 2833 True 613.833333 2191 90.758667 1 4470 6 chr2D.!!$R4 4469
6 TraesCS2A01G441900 chr2D 549016489 549019949 3460 True 272.000000 372 87.453667 3628 4470 3 chr2D.!!$R1 842
7 TraesCS2A01G441900 chr2B 656351023 656352792 1769 True 951.000000 1720 87.085000 1 2986 2 chr2B.!!$R3 2985
8 TraesCS2A01G441900 chr2B 656228183 656230300 2117 True 710.866667 1784 88.486000 3 3761 3 chr2B.!!$R2 3758
9 TraesCS2A01G441900 chr2B 655987718 655990643 2925 True 621.666667 2165 89.478667 1 4468 6 chr2B.!!$R1 4467
10 TraesCS2A01G441900 chr1D 208180611 208181887 1276 True 1531.000000 1531 88.698000 1361 2611 1 chr1D.!!$R1 1250
11 TraesCS2A01G441900 chr5D 396426080 396427326 1246 False 1517.000000 1517 89.058000 1408 2625 1 chr5D.!!$F2 1217
12 TraesCS2A01G441900 chr5D 395930017 395931123 1106 False 1295.000000 1295 87.803000 1 1112 1 chr5D.!!$F1 1111
13 TraesCS2A01G441900 chr3A 692983944 692985196 1252 True 1483.000000 1483 88.106000 1361 2625 1 chr3A.!!$R4 1264
14 TraesCS2A01G441900 chr3A 623603060 623604320 1260 True 1369.000000 1369 86.919000 1408 2625 1 chr3A.!!$R2 1217
15 TraesCS2A01G441900 chr3A 653907755 653908957 1202 True 1214.000000 1214 85.328000 1408 2592 1 chr3A.!!$R3 1184
16 TraesCS2A01G441900 chr3A 655634585 655635503 918 False 1064.000000 1064 87.358000 1355 2319 1 chr3A.!!$F1 964
17 TraesCS2A01G441900 chrUn 21561298 21562328 1030 False 1443.000000 1443 92.070000 1603 2625 1 chrUn.!!$F1 1022
18 TraesCS2A01G441900 chr3D 140787085 140788114 1029 False 1349.000000 1349 90.313000 1583 2625 1 chr3D.!!$F1 1042
19 TraesCS2A01G441900 chr6A 84691367 84692365 998 True 1336.000000 1336 90.918000 1361 2353 1 chr6A.!!$R1 992
20 TraesCS2A01G441900 chr5A 394568380 394569443 1063 True 1308.000000 1308 89.128000 1585 2632 1 chr5A.!!$R1 1047
21 TraesCS2A01G441900 chr5A 504573895 504574886 991 True 210.000000 291 83.993667 3628 4412 3 chr5A.!!$R2 784
22 TraesCS2A01G441900 chr1A 381302713 381303781 1068 True 1251.000000 1251 88.104000 1576 2628 1 chr1A.!!$R1 1052
23 TraesCS2A01G441900 chr1A 516373722 516374436 714 True 826.000000 826 87.895000 1537 2244 1 chr1A.!!$R2 707
24 TraesCS2A01G441900 chr7D 35946376 35947687 1311 False 1109.000000 1109 82.642000 1357 2625 1 chr7D.!!$F1 1268


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
196 197 1.815003 CACAAGCATCTTGGGAGAACC 59.185 52.381 10.8 0.0 35.07 3.62 F
1190 1202 1.001158 GGAGCGTAGTAGTGAGATGGC 60.001 57.143 0.0 0.0 0.00 4.40 F
2987 3299 0.884514 TCTTCCGAGTGCTGACTGAG 59.115 55.000 0.0 0.0 30.16 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1297 1385 0.178953 AACTTGGCAGCTGGGAACAT 60.179 50.0 17.12 0.00 41.51 2.71 R
2989 3301 0.104671 CACAGCCAAACCAAACAGGG 59.895 55.0 0.00 0.00 43.89 4.45 R
4261 4854 0.431233 CAGTTTTGCTCGTCGACTCG 59.569 55.0 14.70 5.29 0.00 4.18 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 4.457949 CAGCTGCATATGGATTGATTGCTA 59.542 41.667 0.00 0.00 34.47 3.49
156 157 7.872113 ATTCTCTTAATTCAAATCTTCGCCT 57.128 32.000 0.00 0.00 0.00 5.52
179 180 7.362056 GCCTAGCAAATAAAAATCTGACTCACA 60.362 37.037 0.00 0.00 0.00 3.58
180 181 8.514594 CCTAGCAAATAAAAATCTGACTCACAA 58.485 33.333 0.00 0.00 0.00 3.33
196 197 1.815003 CACAAGCATCTTGGGAGAACC 59.185 52.381 10.80 0.00 35.07 3.62
254 255 5.838531 AGCGCTACTTTCAAGACTACTAT 57.161 39.130 8.99 0.00 0.00 2.12
326 327 4.974645 AGATTTCTTGACAGTGGTGGTA 57.025 40.909 0.00 0.00 0.00 3.25
333 334 6.620877 TCTTGACAGTGGTGGTAATAGATT 57.379 37.500 0.00 0.00 0.00 2.40
526 532 4.724399 TGTTGGTCAATATGTTGGAGTGT 58.276 39.130 2.06 0.00 35.99 3.55
532 538 4.264614 GTCAATATGTTGGAGTGTCGTACG 59.735 45.833 9.53 9.53 35.99 3.67
607 613 3.937814 TCTTGATCGTTTGGCATACACT 58.062 40.909 8.76 0.00 0.00 3.55
613 619 2.151202 CGTTTGGCATACACTTCAGGT 58.849 47.619 8.76 0.00 0.00 4.00
682 688 3.525609 TGCTCCAGGAATGGGTACATAAA 59.474 43.478 0.00 0.00 35.94 1.40
803 812 1.909302 AGGTCACACATAACCTCCTGG 59.091 52.381 0.00 0.00 42.28 4.45
948 957 9.601217 AATCGGAGATAATATGGTAGTTATTGC 57.399 33.333 0.00 0.00 45.12 3.56
949 958 7.553334 TCGGAGATAATATGGTAGTTATTGCC 58.447 38.462 0.00 0.00 0.00 4.52
950 959 7.399191 TCGGAGATAATATGGTAGTTATTGCCT 59.601 37.037 0.00 0.00 31.87 4.75
951 960 8.041323 CGGAGATAATATGGTAGTTATTGCCTT 58.959 37.037 0.00 0.00 31.87 4.35
998 1007 5.990408 AGACTGTCGAAACTTAAATGCTTG 58.010 37.500 1.52 0.00 0.00 4.01
1070 1079 3.620488 TGTGTCCTGAAGAAGCAAGTTT 58.380 40.909 0.00 0.00 0.00 2.66
1105 1114 3.222603 ACTCCGTTGCCTGAAAAATCTT 58.777 40.909 0.00 0.00 0.00 2.40
1190 1202 1.001158 GGAGCGTAGTAGTGAGATGGC 60.001 57.143 0.00 0.00 0.00 4.40
1203 1215 3.559242 GTGAGATGGCTTTAGCTGATGAC 59.441 47.826 0.00 0.00 41.70 3.06
1210 1222 4.162131 TGGCTTTAGCTGATGACATACTCA 59.838 41.667 0.00 0.00 41.70 3.41
1290 1378 6.215121 TGCTTGTTTTGTTATCATCCAGTTG 58.785 36.000 0.00 0.00 0.00 3.16
1297 1385 3.332187 TGTTATCATCCAGTTGGTCCCAA 59.668 43.478 0.00 0.00 36.34 4.12
1359 1447 1.758862 CAGGAAAATCCAAGGGCCATC 59.241 52.381 6.18 0.00 39.61 3.51
1376 1464 2.146342 CATCAGAGCAACTTCAACGGT 58.854 47.619 0.00 0.00 0.00 4.83
1503 1600 1.374560 CGACCCATTTCATAACCGCA 58.625 50.000 0.00 0.00 0.00 5.69
1580 1700 4.109675 GGGGAAAGCGGCCTAGCA 62.110 66.667 0.00 0.00 40.15 3.49
1686 1870 1.090625 GCTCACTCGTCTCGCCTCTA 61.091 60.000 0.00 0.00 0.00 2.43
1885 2099 2.225727 GGGATATGAATTTTCCCGACGC 59.774 50.000 0.00 0.00 39.80 5.19
2075 2292 5.710099 CCAATTCTACAAGCAAAGGAGGTTA 59.290 40.000 0.00 0.00 0.00 2.85
2240 2457 1.340795 ACGTCGGAGGAGGACATTACT 60.341 52.381 4.48 0.00 34.04 2.24
2293 2512 6.987992 TGGTCTTTTCTTTTATCTGTGTACGT 59.012 34.615 0.00 0.00 0.00 3.57
2465 2702 1.374252 GTCCATCTTGTGTCCGCGT 60.374 57.895 4.92 0.00 0.00 6.01
2513 2752 2.511600 GAATGGTCGACAGGCGGG 60.512 66.667 18.91 0.00 41.33 6.13
2561 2801 2.050442 CGCGTTGGGCCAACTTTC 60.050 61.111 38.24 27.19 41.62 2.62
2625 2867 1.734465 CGTCCCATTGAAGTTGCTCTC 59.266 52.381 0.00 0.00 0.00 3.20
2695 2940 4.336433 CAGCAGGGATTGATAAACGATTGT 59.664 41.667 0.00 0.00 0.00 2.71
2701 2946 5.124776 GGGATTGATAAACGATTGTTGGACA 59.875 40.000 0.00 0.00 38.62 4.02
2720 2965 0.961857 AATGTCAGGCGCATCTGCAA 60.962 50.000 10.83 0.11 42.21 4.08
2741 2986 5.156355 CAATGAGTTCGAAAATGGTTCTGG 58.844 41.667 0.00 0.00 0.00 3.86
2801 3047 7.832503 AATTCTTAAATGCAGTACAAATGCC 57.167 32.000 3.40 0.00 43.18 4.40
2804 3050 0.887247 AATGCAGTACAAATGCCGCA 59.113 45.000 0.00 0.00 43.18 5.69
2848 3157 7.393841 AGTGTAAGAGACATGACTAGGTTAC 57.606 40.000 0.00 8.37 41.14 2.50
2877 3186 7.382218 CCATGTCTTGTGAAAATTTACCACTTC 59.618 37.037 18.50 2.76 0.00 3.01
2879 3188 6.094325 TGTCTTGTGAAAATTTACCACTTCGT 59.906 34.615 18.50 0.00 0.00 3.85
2881 3192 5.821516 TGTGAAAATTTACCACTTCGTGT 57.178 34.783 18.50 0.00 0.00 4.49
2903 3215 7.572910 CGTGTGAATTATTTTGGTCATCACAGA 60.573 37.037 5.99 0.00 44.25 3.41
2937 3249 2.620585 GCTTTTCTTGCTGTGGAGAAGT 59.379 45.455 0.00 0.00 33.77 3.01
2987 3299 0.884514 TCTTCCGAGTGCTGACTGAG 59.115 55.000 0.00 0.00 30.16 3.35
2988 3300 0.108898 CTTCCGAGTGCTGACTGAGG 60.109 60.000 0.00 0.00 30.16 3.86
2989 3301 2.125753 CCGAGTGCTGACTGAGGC 60.126 66.667 0.00 0.00 30.16 4.70
2990 3302 2.125753 CGAGTGCTGACTGAGGCC 60.126 66.667 0.00 0.00 30.16 5.19
2991 3303 2.267324 GAGTGCTGACTGAGGCCC 59.733 66.667 0.00 0.00 30.16 5.80
2994 3306 2.527624 TGCTGACTGAGGCCCTGT 60.528 61.111 0.00 0.60 0.00 4.00
2995 3307 2.149383 TGCTGACTGAGGCCCTGTT 61.149 57.895 0.00 0.00 0.00 3.16
2996 3308 1.073897 GCTGACTGAGGCCCTGTTT 59.926 57.895 0.00 0.00 0.00 2.83
2998 3310 0.607489 CTGACTGAGGCCCTGTTTGG 60.607 60.000 0.00 0.00 0.00 3.28
2999 3311 1.352622 TGACTGAGGCCCTGTTTGGT 61.353 55.000 0.00 0.00 0.00 3.67
3000 3312 0.178990 GACTGAGGCCCTGTTTGGTT 60.179 55.000 0.00 0.00 0.00 3.67
3001 3313 0.261696 ACTGAGGCCCTGTTTGGTTT 59.738 50.000 0.00 0.00 0.00 3.27
3002 3314 0.675633 CTGAGGCCCTGTTTGGTTTG 59.324 55.000 0.00 0.00 0.00 2.93
3003 3315 0.758685 TGAGGCCCTGTTTGGTTTGG 60.759 55.000 0.00 0.00 0.00 3.28
3004 3316 2.099652 GAGGCCCTGTTTGGTTTGGC 62.100 60.000 0.00 0.00 41.42 4.52
3005 3317 2.140138 GGCCCTGTTTGGTTTGGCT 61.140 57.895 0.00 0.00 41.84 4.75
3006 3318 1.069596 GCCCTGTTTGGTTTGGCTG 59.930 57.895 0.00 0.00 39.05 4.85
3007 3319 1.685355 GCCCTGTTTGGTTTGGCTGT 61.685 55.000 0.00 0.00 39.05 4.40
3008 3320 0.104671 CCCTGTTTGGTTTGGCTGTG 59.895 55.000 0.00 0.00 0.00 3.66
3009 3321 0.104671 CCTGTTTGGTTTGGCTGTGG 59.895 55.000 0.00 0.00 0.00 4.17
3010 3322 1.110442 CTGTTTGGTTTGGCTGTGGA 58.890 50.000 0.00 0.00 0.00 4.02
3011 3323 1.688197 CTGTTTGGTTTGGCTGTGGAT 59.312 47.619 0.00 0.00 0.00 3.41
3012 3324 2.102925 CTGTTTGGTTTGGCTGTGGATT 59.897 45.455 0.00 0.00 0.00 3.01
3013 3325 2.503356 TGTTTGGTTTGGCTGTGGATTT 59.497 40.909 0.00 0.00 0.00 2.17
3014 3326 3.130633 GTTTGGTTTGGCTGTGGATTTC 58.869 45.455 0.00 0.00 0.00 2.17
3015 3327 2.380064 TGGTTTGGCTGTGGATTTCT 57.620 45.000 0.00 0.00 0.00 2.52
3016 3328 3.517296 TGGTTTGGCTGTGGATTTCTA 57.483 42.857 0.00 0.00 0.00 2.10
3017 3329 3.838565 TGGTTTGGCTGTGGATTTCTAA 58.161 40.909 0.00 0.00 0.00 2.10
3018 3330 4.219115 TGGTTTGGCTGTGGATTTCTAAA 58.781 39.130 0.00 0.00 0.00 1.85
3019 3331 4.651503 TGGTTTGGCTGTGGATTTCTAAAA 59.348 37.500 0.00 0.00 0.00 1.52
3020 3332 5.221422 TGGTTTGGCTGTGGATTTCTAAAAG 60.221 40.000 0.00 0.00 0.00 2.27
3021 3333 4.519540 TTGGCTGTGGATTTCTAAAAGC 57.480 40.909 0.00 0.00 0.00 3.51
3022 3334 3.495331 TGGCTGTGGATTTCTAAAAGCA 58.505 40.909 0.00 0.00 0.00 3.91
3023 3335 3.507233 TGGCTGTGGATTTCTAAAAGCAG 59.493 43.478 0.00 0.00 0.00 4.24
3024 3336 3.505836 GCTGTGGATTTCTAAAAGCAGC 58.494 45.455 0.00 0.00 40.66 5.25
3025 3337 3.192212 GCTGTGGATTTCTAAAAGCAGCT 59.808 43.478 0.00 0.00 43.08 4.24
3026 3338 4.730657 CTGTGGATTTCTAAAAGCAGCTG 58.269 43.478 10.11 10.11 0.00 4.24
3027 3339 4.144297 TGTGGATTTCTAAAAGCAGCTGT 58.856 39.130 16.64 0.00 0.00 4.40
3028 3340 5.312895 TGTGGATTTCTAAAAGCAGCTGTA 58.687 37.500 16.64 0.00 0.00 2.74
3029 3341 5.767665 TGTGGATTTCTAAAAGCAGCTGTAA 59.232 36.000 16.64 0.00 0.00 2.41
3030 3342 6.264292 TGTGGATTTCTAAAAGCAGCTGTAAA 59.736 34.615 16.64 5.54 0.00 2.01
3031 3343 7.145323 GTGGATTTCTAAAAGCAGCTGTAAAA 58.855 34.615 16.64 6.21 0.00 1.52
3032 3344 7.651704 GTGGATTTCTAAAAGCAGCTGTAAAAA 59.348 33.333 16.64 7.20 0.00 1.94
3058 3370 3.781079 CTGTGGAAAAACAGCTGTGAA 57.219 42.857 22.49 0.00 41.05 3.18
3059 3371 4.108699 CTGTGGAAAAACAGCTGTGAAA 57.891 40.909 22.49 0.21 41.05 2.69
3060 3372 4.493547 CTGTGGAAAAACAGCTGTGAAAA 58.506 39.130 22.49 1.38 41.05 2.29
3061 3373 4.887748 TGTGGAAAAACAGCTGTGAAAAA 58.112 34.783 22.49 1.99 0.00 1.94
3062 3374 5.486526 TGTGGAAAAACAGCTGTGAAAAAT 58.513 33.333 22.49 0.00 0.00 1.82
3063 3375 5.580297 TGTGGAAAAACAGCTGTGAAAAATC 59.420 36.000 22.49 12.62 0.00 2.17
3064 3376 5.812127 GTGGAAAAACAGCTGTGAAAAATCT 59.188 36.000 22.49 0.00 0.00 2.40
3065 3377 5.811613 TGGAAAAACAGCTGTGAAAAATCTG 59.188 36.000 22.49 0.00 0.00 2.90
3066 3378 6.042143 GGAAAAACAGCTGTGAAAAATCTGA 58.958 36.000 22.49 0.00 0.00 3.27
3067 3379 6.703165 GGAAAAACAGCTGTGAAAAATCTGAT 59.297 34.615 22.49 0.00 0.00 2.90
3068 3380 7.306983 GGAAAAACAGCTGTGAAAAATCTGATG 60.307 37.037 22.49 0.00 0.00 3.07
3069 3381 5.779529 AACAGCTGTGAAAAATCTGATGT 57.220 34.783 22.49 0.00 34.67 3.06
3070 3382 5.117355 ACAGCTGTGAAAAATCTGATGTG 57.883 39.130 20.97 0.00 32.73 3.21
3071 3383 4.823442 ACAGCTGTGAAAAATCTGATGTGA 59.177 37.500 20.97 0.00 32.73 3.58
3072 3384 5.300034 ACAGCTGTGAAAAATCTGATGTGAA 59.700 36.000 20.97 0.00 32.73 3.18
3073 3385 6.183360 ACAGCTGTGAAAAATCTGATGTGAAA 60.183 34.615 20.97 0.00 32.73 2.69
3074 3386 6.698329 CAGCTGTGAAAAATCTGATGTGAAAA 59.302 34.615 5.25 0.00 0.00 2.29
3075 3387 7.223193 CAGCTGTGAAAAATCTGATGTGAAAAA 59.777 33.333 5.25 0.00 0.00 1.94
3076 3388 7.437267 AGCTGTGAAAAATCTGATGTGAAAAAG 59.563 33.333 0.00 0.00 0.00 2.27
3077 3389 7.436080 GCTGTGAAAAATCTGATGTGAAAAAGA 59.564 33.333 0.00 0.00 0.00 2.52
3078 3390 9.472361 CTGTGAAAAATCTGATGTGAAAAAGAT 57.528 29.630 0.00 0.00 0.00 2.40
3079 3391 9.251792 TGTGAAAAATCTGATGTGAAAAAGATG 57.748 29.630 0.00 0.00 29.93 2.90
3080 3392 9.252962 GTGAAAAATCTGATGTGAAAAAGATGT 57.747 29.630 0.00 0.00 29.93 3.06
3083 3395 9.918630 AAAAATCTGATGTGAAAAAGATGTAGG 57.081 29.630 0.00 0.00 29.93 3.18
3084 3396 8.641498 AAATCTGATGTGAAAAAGATGTAGGT 57.359 30.769 0.00 0.00 29.93 3.08
3085 3397 7.856145 ATCTGATGTGAAAAAGATGTAGGTC 57.144 36.000 0.00 0.00 0.00 3.85
3086 3398 6.768483 TCTGATGTGAAAAAGATGTAGGTCA 58.232 36.000 0.00 0.00 0.00 4.02
3087 3399 7.397221 TCTGATGTGAAAAAGATGTAGGTCAT 58.603 34.615 0.00 0.00 39.77 3.06
3088 3400 7.884877 TCTGATGTGAAAAAGATGTAGGTCATT 59.115 33.333 0.00 0.00 36.83 2.57
3089 3401 8.408043 TGATGTGAAAAAGATGTAGGTCATTT 57.592 30.769 0.00 0.00 36.83 2.32
3090 3402 8.298854 TGATGTGAAAAAGATGTAGGTCATTTG 58.701 33.333 0.00 0.00 36.83 2.32
3091 3403 6.980593 TGTGAAAAAGATGTAGGTCATTTGG 58.019 36.000 0.00 0.00 36.83 3.28
3092 3404 5.863935 GTGAAAAAGATGTAGGTCATTTGGC 59.136 40.000 0.00 0.00 36.83 4.52
3093 3405 5.538053 TGAAAAAGATGTAGGTCATTTGGCA 59.462 36.000 0.00 0.00 36.83 4.92
3094 3406 6.041409 TGAAAAAGATGTAGGTCATTTGGCAA 59.959 34.615 0.00 0.00 36.83 4.52
3095 3407 6.418057 AAAAGATGTAGGTCATTTGGCAAA 57.582 33.333 16.01 16.01 36.83 3.68
3096 3408 5.391312 AAGATGTAGGTCATTTGGCAAAC 57.609 39.130 16.00 3.12 36.83 2.93
3097 3409 3.763897 AGATGTAGGTCATTTGGCAAACC 59.236 43.478 16.00 13.12 36.83 3.27
3098 3410 3.509575 GATGTAGGTCATTTGGCAAACCA 59.490 43.478 16.00 1.33 39.74 3.67
3099 3411 4.380867 GATGTAGGTCATTTGGCAAACCAG 60.381 45.833 16.00 8.58 41.40 4.00
3100 3412 7.845340 GATGTAGGTCATTTGGCAAACCAGC 62.845 48.000 16.00 13.65 41.40 4.85
3126 3438 9.727627 CTGATATAGCTTTTTCAGATTTTGACC 57.272 33.333 16.01 0.00 38.25 4.02
3127 3439 8.686334 TGATATAGCTTTTTCAGATTTTGACCC 58.314 33.333 0.00 0.00 34.94 4.46
3128 3440 8.829373 ATATAGCTTTTTCAGATTTTGACCCT 57.171 30.769 0.00 0.00 34.94 4.34
3129 3441 5.459536 AGCTTTTTCAGATTTTGACCCTC 57.540 39.130 0.00 0.00 34.94 4.30
3130 3442 4.895297 AGCTTTTTCAGATTTTGACCCTCA 59.105 37.500 0.00 0.00 34.94 3.86
3131 3443 5.010415 AGCTTTTTCAGATTTTGACCCTCAG 59.990 40.000 0.00 0.00 34.94 3.35
3132 3444 4.853924 TTTTCAGATTTTGACCCTCAGC 57.146 40.909 0.00 0.00 34.94 4.26
3133 3445 2.099141 TCAGATTTTGACCCTCAGCG 57.901 50.000 0.00 0.00 0.00 5.18
3134 3446 1.089920 CAGATTTTGACCCTCAGCGG 58.910 55.000 0.00 0.00 0.00 5.52
3135 3447 0.984230 AGATTTTGACCCTCAGCGGA 59.016 50.000 0.00 0.00 33.16 5.54
3136 3448 1.351017 AGATTTTGACCCTCAGCGGAA 59.649 47.619 0.00 0.00 33.16 4.30
3137 3449 2.025887 AGATTTTGACCCTCAGCGGAAT 60.026 45.455 0.00 0.00 33.16 3.01
3138 3450 1.821216 TTTTGACCCTCAGCGGAATC 58.179 50.000 0.00 0.00 33.16 2.52
3139 3451 0.690192 TTTGACCCTCAGCGGAATCA 59.310 50.000 0.00 0.00 33.16 2.57
3140 3452 0.250234 TTGACCCTCAGCGGAATCAG 59.750 55.000 0.00 0.00 31.76 2.90
3141 3453 0.614697 TGACCCTCAGCGGAATCAGA 60.615 55.000 0.00 0.00 33.16 3.27
3142 3454 0.755686 GACCCTCAGCGGAATCAGAT 59.244 55.000 0.00 0.00 33.16 2.90
3143 3455 1.139853 GACCCTCAGCGGAATCAGATT 59.860 52.381 0.00 0.00 33.16 2.40
3144 3456 1.561542 ACCCTCAGCGGAATCAGATTT 59.438 47.619 0.00 0.00 33.16 2.17
3145 3457 2.025887 ACCCTCAGCGGAATCAGATTTT 60.026 45.455 0.00 0.00 33.16 1.82
3146 3458 2.357009 CCCTCAGCGGAATCAGATTTTG 59.643 50.000 0.00 0.00 33.16 2.44
3147 3459 2.357009 CCTCAGCGGAATCAGATTTTGG 59.643 50.000 0.00 0.00 33.16 3.28
3148 3460 3.273434 CTCAGCGGAATCAGATTTTGGA 58.727 45.455 0.00 0.00 0.00 3.53
3149 3461 3.684908 TCAGCGGAATCAGATTTTGGAA 58.315 40.909 0.00 0.00 0.00 3.53
3150 3462 4.078537 TCAGCGGAATCAGATTTTGGAAA 58.921 39.130 0.00 0.00 0.00 3.13
3151 3463 4.156556 TCAGCGGAATCAGATTTTGGAAAG 59.843 41.667 0.00 0.00 0.00 2.62
3152 3464 3.119352 AGCGGAATCAGATTTTGGAAAGC 60.119 43.478 0.00 0.00 0.00 3.51
3153 3465 3.367292 GCGGAATCAGATTTTGGAAAGCA 60.367 43.478 0.00 0.00 0.00 3.91
3154 3466 4.168760 CGGAATCAGATTTTGGAAAGCAC 58.831 43.478 0.00 0.00 0.00 4.40
3155 3467 4.168760 GGAATCAGATTTTGGAAAGCACG 58.831 43.478 0.00 0.00 0.00 5.34
3156 3468 4.321230 GGAATCAGATTTTGGAAAGCACGT 60.321 41.667 0.00 0.00 0.00 4.49
3157 3469 3.896648 TCAGATTTTGGAAAGCACGTC 57.103 42.857 0.00 0.00 0.00 4.34
3158 3470 2.552315 TCAGATTTTGGAAAGCACGTCC 59.448 45.455 0.00 0.00 35.55 4.79
3159 3471 2.554032 CAGATTTTGGAAAGCACGTCCT 59.446 45.455 0.00 0.00 36.03 3.85
3160 3472 2.814336 AGATTTTGGAAAGCACGTCCTC 59.186 45.455 0.00 0.00 36.03 3.71
3161 3473 2.045561 TTTTGGAAAGCACGTCCTCA 57.954 45.000 0.00 0.00 36.03 3.86
3162 3474 1.593196 TTTGGAAAGCACGTCCTCAG 58.407 50.000 0.00 0.00 36.03 3.35
3163 3475 0.884704 TTGGAAAGCACGTCCTCAGC 60.885 55.000 0.00 0.00 36.03 4.26
3164 3476 1.004440 GGAAAGCACGTCCTCAGCT 60.004 57.895 0.00 0.00 41.03 4.24
3165 3477 1.294659 GGAAAGCACGTCCTCAGCTG 61.295 60.000 7.63 7.63 38.86 4.24
3166 3478 1.905922 GAAAGCACGTCCTCAGCTGC 61.906 60.000 9.47 0.00 38.86 5.25
3167 3479 2.388890 AAAGCACGTCCTCAGCTGCT 62.389 55.000 9.47 0.00 41.83 4.24
3168 3480 2.358003 GCACGTCCTCAGCTGCTT 60.358 61.111 9.47 0.00 0.00 3.91
3169 3481 1.963338 GCACGTCCTCAGCTGCTTT 60.963 57.895 9.47 0.00 0.00 3.51
3170 3482 1.905922 GCACGTCCTCAGCTGCTTTC 61.906 60.000 9.47 0.00 0.00 2.62
3171 3483 1.373497 ACGTCCTCAGCTGCTTTCG 60.373 57.895 9.47 13.38 0.00 3.46
3172 3484 2.734673 CGTCCTCAGCTGCTTTCGC 61.735 63.158 9.47 0.00 0.00 4.70
3173 3485 1.375268 GTCCTCAGCTGCTTTCGCT 60.375 57.895 9.47 0.00 38.49 4.93
3174 3486 0.952984 GTCCTCAGCTGCTTTCGCTT 60.953 55.000 9.47 0.00 35.07 4.68
3175 3487 0.250467 TCCTCAGCTGCTTTCGCTTT 60.250 50.000 9.47 0.00 35.07 3.51
3176 3488 0.595095 CCTCAGCTGCTTTCGCTTTT 59.405 50.000 9.47 0.00 35.07 2.27
3177 3489 1.665161 CCTCAGCTGCTTTCGCTTTTG 60.665 52.381 9.47 0.00 35.07 2.44
3178 3490 0.311790 TCAGCTGCTTTCGCTTTTGG 59.688 50.000 9.47 0.00 35.07 3.28
3179 3491 0.031178 CAGCTGCTTTCGCTTTTGGT 59.969 50.000 0.00 0.00 35.07 3.67
3180 3492 0.746659 AGCTGCTTTCGCTTTTGGTT 59.253 45.000 0.00 0.00 32.98 3.67
3181 3493 1.136891 AGCTGCTTTCGCTTTTGGTTT 59.863 42.857 0.00 0.00 32.98 3.27
3182 3494 2.360801 AGCTGCTTTCGCTTTTGGTTTA 59.639 40.909 0.00 0.00 32.98 2.01
3183 3495 3.120041 GCTGCTTTCGCTTTTGGTTTAA 58.880 40.909 0.00 0.00 36.97 1.52
3184 3496 3.553917 GCTGCTTTCGCTTTTGGTTTAAA 59.446 39.130 0.00 0.00 36.97 1.52
3185 3497 4.211164 GCTGCTTTCGCTTTTGGTTTAAAT 59.789 37.500 0.00 0.00 36.97 1.40
3186 3498 5.277297 GCTGCTTTCGCTTTTGGTTTAAATT 60.277 36.000 0.00 0.00 36.97 1.82
3187 3499 6.670077 TGCTTTCGCTTTTGGTTTAAATTT 57.330 29.167 0.00 0.00 36.97 1.82
3188 3500 7.078011 TGCTTTCGCTTTTGGTTTAAATTTT 57.922 28.000 0.00 0.00 36.97 1.82
3189 3501 6.963805 TGCTTTCGCTTTTGGTTTAAATTTTG 59.036 30.769 0.00 0.00 36.97 2.44
3190 3502 6.413526 GCTTTCGCTTTTGGTTTAAATTTTGG 59.586 34.615 0.00 0.00 0.00 3.28
3191 3503 5.411083 TCGCTTTTGGTTTAAATTTTGGC 57.589 34.783 0.00 0.00 0.00 4.52
3192 3504 4.876107 TCGCTTTTGGTTTAAATTTTGGCA 59.124 33.333 0.00 0.00 0.00 4.92
3193 3505 5.007136 TCGCTTTTGGTTTAAATTTTGGCAG 59.993 36.000 0.00 0.00 0.00 4.85
3194 3506 5.220758 CGCTTTTGGTTTAAATTTTGGCAGT 60.221 36.000 0.00 0.00 0.00 4.40
3195 3507 6.018669 CGCTTTTGGTTTAAATTTTGGCAGTA 60.019 34.615 0.00 0.00 0.00 2.74
3196 3508 7.351981 GCTTTTGGTTTAAATTTTGGCAGTAG 58.648 34.615 0.00 0.00 0.00 2.57
3197 3509 7.225734 GCTTTTGGTTTAAATTTTGGCAGTAGA 59.774 33.333 0.00 0.00 0.00 2.59
3198 3510 9.271828 CTTTTGGTTTAAATTTTGGCAGTAGAT 57.728 29.630 0.00 0.00 0.00 1.98
3199 3511 9.620259 TTTTGGTTTAAATTTTGGCAGTAGATT 57.380 25.926 0.00 0.00 0.00 2.40
3200 3512 9.620259 TTTGGTTTAAATTTTGGCAGTAGATTT 57.380 25.926 0.00 0.00 0.00 2.17
3201 3513 8.825667 TGGTTTAAATTTTGGCAGTAGATTTC 57.174 30.769 0.00 0.00 0.00 2.17
3202 3514 8.646900 TGGTTTAAATTTTGGCAGTAGATTTCT 58.353 29.630 0.00 0.00 0.00 2.52
3203 3515 8.925700 GGTTTAAATTTTGGCAGTAGATTTCTG 58.074 33.333 0.00 0.00 36.18 3.02
3204 3516 9.691362 GTTTAAATTTTGGCAGTAGATTTCTGA 57.309 29.630 0.00 0.00 35.20 3.27
3208 3520 8.992835 AATTTTGGCAGTAGATTTCTGAAATC 57.007 30.769 27.62 27.62 45.98 2.17
3222 3534 8.655935 ATTTCTGAAATCAAATTCTACTGGGT 57.344 30.769 9.76 0.00 0.00 4.51
3223 3535 8.477419 TTTCTGAAATCAAATTCTACTGGGTT 57.523 30.769 0.00 0.00 0.00 4.11
3224 3536 7.687941 TCTGAAATCAAATTCTACTGGGTTC 57.312 36.000 0.00 0.00 0.00 3.62
3225 3537 6.371548 TCTGAAATCAAATTCTACTGGGTTCG 59.628 38.462 0.00 0.00 0.00 3.95
3226 3538 5.414454 TGAAATCAAATTCTACTGGGTTCGG 59.586 40.000 0.00 0.00 0.00 4.30
3227 3539 2.706890 TCAAATTCTACTGGGTTCGGC 58.293 47.619 0.00 0.00 0.00 5.54
3228 3540 1.743394 CAAATTCTACTGGGTTCGGCC 59.257 52.381 0.00 0.00 0.00 6.13
3229 3541 1.286248 AATTCTACTGGGTTCGGCCT 58.714 50.000 0.00 0.00 37.43 5.19
3230 3542 1.286248 ATTCTACTGGGTTCGGCCTT 58.714 50.000 0.00 0.00 37.43 4.35
3231 3543 1.061546 TTCTACTGGGTTCGGCCTTT 58.938 50.000 0.00 0.00 37.43 3.11
3232 3544 1.061546 TCTACTGGGTTCGGCCTTTT 58.938 50.000 0.00 0.00 37.43 2.27
3233 3545 1.165270 CTACTGGGTTCGGCCTTTTG 58.835 55.000 0.00 0.00 37.43 2.44
3234 3546 0.475044 TACTGGGTTCGGCCTTTTGT 59.525 50.000 0.00 0.00 37.43 2.83
3235 3547 0.396556 ACTGGGTTCGGCCTTTTGTT 60.397 50.000 0.00 0.00 37.43 2.83
3236 3548 0.313987 CTGGGTTCGGCCTTTTGTTC 59.686 55.000 0.00 0.00 37.43 3.18
3237 3549 0.395862 TGGGTTCGGCCTTTTGTTCA 60.396 50.000 0.00 0.00 37.43 3.18
3238 3550 0.747852 GGGTTCGGCCTTTTGTTCAA 59.252 50.000 0.00 0.00 37.43 2.69
3239 3551 1.137282 GGGTTCGGCCTTTTGTTCAAA 59.863 47.619 0.00 0.00 37.43 2.69
3240 3552 2.224185 GGGTTCGGCCTTTTGTTCAAAT 60.224 45.455 0.00 0.00 37.43 2.32
3241 3553 3.462982 GGTTCGGCCTTTTGTTCAAATT 58.537 40.909 0.00 0.00 0.00 1.82
3242 3554 3.493129 GGTTCGGCCTTTTGTTCAAATTC 59.507 43.478 0.00 0.00 0.00 2.17
3243 3555 4.368315 GTTCGGCCTTTTGTTCAAATTCT 58.632 39.130 0.00 0.00 0.00 2.40
3244 3556 3.976169 TCGGCCTTTTGTTCAAATTCTG 58.024 40.909 0.00 0.00 0.00 3.02
3245 3557 3.634448 TCGGCCTTTTGTTCAAATTCTGA 59.366 39.130 0.00 0.79 0.00 3.27
3246 3558 4.280677 TCGGCCTTTTGTTCAAATTCTGAT 59.719 37.500 0.00 0.00 32.78 2.90
3247 3559 4.386652 CGGCCTTTTGTTCAAATTCTGATG 59.613 41.667 0.00 0.00 32.78 3.07
3248 3560 4.152938 GGCCTTTTGTTCAAATTCTGATGC 59.847 41.667 0.00 0.00 32.78 3.91
3249 3561 4.143263 GCCTTTTGTTCAAATTCTGATGCG 60.143 41.667 0.00 0.00 32.78 4.73
3250 3562 4.143263 CCTTTTGTTCAAATTCTGATGCGC 60.143 41.667 0.00 0.00 32.78 6.09
3251 3563 2.245795 TGTTCAAATTCTGATGCGCG 57.754 45.000 0.00 0.00 32.78 6.86
3252 3564 1.135717 TGTTCAAATTCTGATGCGCGG 60.136 47.619 8.83 0.00 32.78 6.46
3253 3565 0.179166 TTCAAATTCTGATGCGCGGC 60.179 50.000 8.83 0.00 32.78 6.53
3254 3566 1.137194 CAAATTCTGATGCGCGGCA 59.863 52.632 8.83 7.01 44.86 5.69
3255 3567 0.864377 CAAATTCTGATGCGCGGCAG 60.864 55.000 19.65 19.65 43.65 4.85
3256 3568 2.603135 AAATTCTGATGCGCGGCAGC 62.603 55.000 20.56 10.18 45.81 5.25
3275 3587 2.924432 CGGAATCCGTCGATAAAAGC 57.076 50.000 14.46 0.00 42.73 3.51
3276 3588 2.470821 CGGAATCCGTCGATAAAAGCT 58.529 47.619 14.46 0.00 42.73 3.74
3277 3589 2.218759 CGGAATCCGTCGATAAAAGCTG 59.781 50.000 14.46 0.00 42.73 4.24
3278 3590 3.454375 GGAATCCGTCGATAAAAGCTGA 58.546 45.455 0.00 0.00 0.00 4.26
3279 3591 3.869246 GGAATCCGTCGATAAAAGCTGAA 59.131 43.478 0.00 0.00 0.00 3.02
3280 3592 4.260253 GGAATCCGTCGATAAAAGCTGAAC 60.260 45.833 0.00 0.00 0.00 3.18
3281 3593 2.613691 TCCGTCGATAAAAGCTGAACC 58.386 47.619 0.00 0.00 0.00 3.62
3282 3594 2.028839 TCCGTCGATAAAAGCTGAACCA 60.029 45.455 0.00 0.00 0.00 3.67
3283 3595 2.739913 CCGTCGATAAAAGCTGAACCAA 59.260 45.455 0.00 0.00 0.00 3.67
3284 3596 3.187637 CCGTCGATAAAAGCTGAACCAAA 59.812 43.478 0.00 0.00 0.00 3.28
3285 3597 4.148891 CGTCGATAAAAGCTGAACCAAAC 58.851 43.478 0.00 0.00 0.00 2.93
3286 3598 4.319190 CGTCGATAAAAGCTGAACCAAACA 60.319 41.667 0.00 0.00 0.00 2.83
3287 3599 5.147162 GTCGATAAAAGCTGAACCAAACAG 58.853 41.667 0.00 0.00 38.27 3.16
3288 3600 4.215399 TCGATAAAAGCTGAACCAAACAGG 59.785 41.667 0.00 0.00 45.67 4.00
3289 3601 4.615912 CGATAAAAGCTGAACCAAACAGGG 60.616 45.833 0.00 0.00 43.89 4.45
3290 3602 0.752658 AAAGCTGAACCAAACAGGGC 59.247 50.000 0.00 0.00 43.89 5.19
3291 3603 1.115326 AAGCTGAACCAAACAGGGCC 61.115 55.000 0.00 0.00 43.89 5.80
3292 3604 1.531602 GCTGAACCAAACAGGGCCT 60.532 57.895 0.00 0.00 43.89 5.19
3293 3605 0.251165 GCTGAACCAAACAGGGCCTA 60.251 55.000 5.28 0.00 43.89 3.93
3351 3669 1.094073 ATGAATGACTGGAGCAGCGC 61.094 55.000 0.00 0.00 34.37 5.92
3392 3719 0.527600 TGATGCCGACGTATGCTCAC 60.528 55.000 9.83 3.06 0.00 3.51
3467 3797 0.950116 GCAGAAGCACAAGAGCAAGT 59.050 50.000 0.00 0.00 41.58 3.16
3549 3879 2.193536 GCTGCGGTTTCCCTGTTGT 61.194 57.895 0.00 0.00 0.00 3.32
3651 3981 9.261035 CTATATAATCCCATCACTGTAGAACCT 57.739 37.037 0.00 0.00 0.00 3.50
3653 3983 5.878406 AATCCCATCACTGTAGAACCTAG 57.122 43.478 0.00 0.00 0.00 3.02
3721 4056 4.398988 TGTTGTTGCCTTGCATATCCTTAG 59.601 41.667 0.00 0.00 38.76 2.18
3722 4057 4.235079 TGTTGCCTTGCATATCCTTAGT 57.765 40.909 0.00 0.00 38.76 2.24
3723 4058 4.599041 TGTTGCCTTGCATATCCTTAGTT 58.401 39.130 0.00 0.00 38.76 2.24
3724 4059 4.640201 TGTTGCCTTGCATATCCTTAGTTC 59.360 41.667 0.00 0.00 38.76 3.01
3725 4060 3.820557 TGCCTTGCATATCCTTAGTTCC 58.179 45.455 0.00 0.00 31.71 3.62
3726 4061 3.459598 TGCCTTGCATATCCTTAGTTCCT 59.540 43.478 0.00 0.00 31.71 3.36
3727 4062 4.079787 TGCCTTGCATATCCTTAGTTCCTT 60.080 41.667 0.00 0.00 31.71 3.36
3728 4063 5.131977 TGCCTTGCATATCCTTAGTTCCTTA 59.868 40.000 0.00 0.00 31.71 2.69
3788 4123 0.039978 TTGTTGCCGTGTTTATGCCG 60.040 50.000 0.00 0.00 0.00 5.69
3802 4137 1.930567 ATGCCGCATCTTTTCATTGC 58.069 45.000 0.00 0.00 0.00 3.56
3803 4138 0.602060 TGCCGCATCTTTTCATTGCA 59.398 45.000 0.00 0.00 36.15 4.08
3822 4157 2.364002 GCAGACCCAGTTAAGCCAAAAA 59.636 45.455 0.00 0.00 0.00 1.94
3823 4158 3.552890 GCAGACCCAGTTAAGCCAAAAAG 60.553 47.826 0.00 0.00 0.00 2.27
3920 4320 8.092687 ACATATAGTACTTGACAAACGGAAACT 58.907 33.333 0.00 0.00 0.00 2.66
3996 4422 0.179000 ACTTGGGATCGGATGACTGC 59.821 55.000 0.00 0.00 0.00 4.40
4004 4430 3.461061 GATCGGATGACTGCAAGATTGA 58.539 45.455 0.00 0.00 37.43 2.57
4023 4449 5.349061 TTGATAGCATCTCTCAGCTTTGA 57.651 39.130 0.00 0.00 42.05 2.69
4024 4450 4.691175 TGATAGCATCTCTCAGCTTTGAC 58.309 43.478 0.00 0.00 42.05 3.18
4043 4469 1.202770 ACTGGTTGTGAGGGCTTGTAC 60.203 52.381 0.00 0.00 0.00 2.90
4046 4472 2.152016 GGTTGTGAGGGCTTGTACTTC 58.848 52.381 0.00 0.00 0.00 3.01
4057 4483 4.575236 GGGCTTGTACTTCTGCCTATTTAC 59.425 45.833 14.84 0.00 44.36 2.01
4060 4486 6.702282 GGCTTGTACTTCTGCCTATTTACTAG 59.298 42.308 10.26 0.00 41.92 2.57
4099 4641 5.899299 TCCTAAGTATTTACCTTCGTCTGC 58.101 41.667 0.00 0.00 0.00 4.26
4102 4644 3.858247 AGTATTTACCTTCGTCTGCCAC 58.142 45.455 0.00 0.00 0.00 5.01
4127 4669 4.877619 TTTTGCCGGCACCCACGA 62.878 61.111 32.95 11.21 0.00 4.35
4162 4704 5.289595 CAGCTAATTATGTGGAACGAGCTA 58.710 41.667 0.00 0.00 42.39 3.32
4172 4714 2.557924 TGGAACGAGCTAACGGAAAGTA 59.442 45.455 0.00 0.00 37.61 2.24
4193 4780 4.009015 GGCCCTTTCTCTGCCTTG 57.991 61.111 0.00 0.00 42.01 3.61
4270 5123 4.172796 TCAAAAGAAAAACGAGTCGACG 57.827 40.909 21.50 1.24 39.31 5.12
4274 5127 1.126079 GAAAAACGAGTCGACGAGCA 58.874 50.000 21.50 0.00 37.03 4.26
4394 7548 4.516698 CCAACAGCCATGATCCAGTAATAC 59.483 45.833 0.00 0.00 0.00 1.89
4427 7581 6.425114 GTGATGATAGCATTCGTAATTCACCT 59.575 38.462 0.00 0.00 34.11 4.00
4451 7605 2.479049 GCACAGAGTAATGCAAGCATGG 60.479 50.000 8.50 0.00 41.65 3.66
4460 7614 1.456296 TGCAAGCATGGATCACACTC 58.544 50.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 8.062065 TCCACACAAGAAAAACTAACTCAAAT 57.938 30.769 0.00 0.00 0.00 2.32
131 132 8.286191 AGGCGAAGATTTGAATTAAGAGAATT 57.714 30.769 0.00 0.00 0.00 2.17
156 157 8.023128 GCTTGTGAGTCAGATTTTTATTTGCTA 58.977 33.333 0.00 0.00 0.00 3.49
196 197 1.469251 GCATGAAGCAGGAGCATTGTG 60.469 52.381 0.00 0.00 45.49 3.33
254 255 7.147724 CCAATCAGAACTATTGTCCAGGTACTA 60.148 40.741 0.00 0.00 32.29 1.82
326 327 9.972106 AAAGTTCAAGATCAAGGAGAATCTATT 57.028 29.630 0.00 0.00 33.73 1.73
333 334 5.639506 CGCTTAAAGTTCAAGATCAAGGAGA 59.360 40.000 0.00 0.00 0.00 3.71
495 501 7.094248 CCAACATATTGACCAACAGAGATTTCA 60.094 37.037 0.00 0.00 38.15 2.69
526 532 3.581024 ATGTAAACCTTGCTCGTACGA 57.419 42.857 18.41 18.41 0.00 3.43
532 538 3.821033 AGGTGTCAATGTAAACCTTGCTC 59.179 43.478 0.00 0.00 40.14 4.26
607 613 7.107639 TGTCTGATATATGAAACGACCTGAA 57.892 36.000 0.00 0.00 0.00 3.02
613 619 8.935844 GCCATAATTGTCTGATATATGAAACGA 58.064 33.333 0.00 0.00 0.00 3.85
682 688 7.540474 TGAAGTACTAGAAGGACATGAAGTT 57.460 36.000 0.00 0.00 0.00 2.66
803 812 7.396339 AGGTAAATCCTTAAACACTTCATTCCC 59.604 37.037 0.00 0.00 45.67 3.97
908 917 2.793946 GATTGCGGCGAGTGCATT 59.206 55.556 12.98 0.00 45.35 3.56
955 964 2.267961 CGGGCTCTTGGGTGTACC 59.732 66.667 0.00 0.00 40.81 3.34
998 1007 8.725148 CATACAAATCCTCCTTGCTAATCATAC 58.275 37.037 0.00 0.00 0.00 2.39
1070 1079 3.746045 ACGGAGTCTCTTGCTTTACAA 57.254 42.857 0.00 0.00 29.74 2.41
1105 1114 9.860650 AATAACATTGCCAGACTTATTACCATA 57.139 29.630 0.00 0.00 0.00 2.74
1190 1202 7.924947 TCTCAATGAGTATGTCATCAGCTAAAG 59.075 37.037 10.36 0.00 45.89 1.85
1203 1215 6.339730 AGTCTCAAGCTTCTCAATGAGTATG 58.660 40.000 10.36 3.26 40.11 2.39
1210 1222 4.219507 TCGAAGAGTCTCAAGCTTCTCAAT 59.780 41.667 13.59 4.04 36.70 2.57
1245 1272 8.577939 CAAGCATTATAACATTTGAAACTCACG 58.422 33.333 0.00 0.00 0.00 4.35
1290 1378 0.967380 CAGCTGGGAACATTGGGACC 60.967 60.000 5.57 0.00 41.51 4.46
1297 1385 0.178953 AACTTGGCAGCTGGGAACAT 60.179 50.000 17.12 0.00 41.51 2.71
1329 1417 6.229733 CCTTGGATTTTCCTGCACAAATTAA 58.770 36.000 0.00 0.00 37.46 1.40
1342 1430 2.692041 CTCTGATGGCCCTTGGATTTTC 59.308 50.000 0.00 0.00 0.00 2.29
1359 1447 0.868406 GGACCGTTGAAGTTGCTCTG 59.132 55.000 0.00 0.00 0.00 3.35
1391 1479 2.996621 CAAAAAGCGGACAAAAACACCA 59.003 40.909 0.00 0.00 0.00 4.17
1503 1600 1.480205 GCATGATTTAAAGCGCGCAT 58.520 45.000 35.10 20.88 0.00 4.73
1614 1757 1.136305 AGCGCCTTCTTATAACGAGCA 59.864 47.619 2.29 0.00 0.00 4.26
1669 1831 1.082679 CGTAGAGGCGAGACGAGTGA 61.083 60.000 0.00 0.00 38.88 3.41
1847 2060 2.202676 CGACGAGGCCTCAAGAGC 60.203 66.667 31.67 14.22 0.00 4.09
1851 2065 0.469331 ATATCCCGACGAGGCCTCAA 60.469 55.000 31.67 10.14 39.21 3.02
1994 2211 1.228521 CACCACCATGGCTTCCACA 60.229 57.895 13.04 0.00 42.67 4.17
2054 2271 6.213600 TCTCTAACCTCCTTTGCTTGTAGAAT 59.786 38.462 0.00 0.00 0.00 2.40
2075 2292 2.124487 CTCCTCGCGTCCCTCTCT 60.124 66.667 5.77 0.00 0.00 3.10
2240 2457 0.241213 CGCTTTCTGACTCCGACTCA 59.759 55.000 0.00 0.00 0.00 3.41
2361 2592 2.367567 ACATCAAACAGTACACCCTCGT 59.632 45.455 0.00 0.00 0.00 4.18
2426 2657 3.655481 CGTGCTCGCCCTCTTTTT 58.345 55.556 0.00 0.00 0.00 1.94
2451 2688 1.443872 GTCGACGCGGACACAAGAT 60.444 57.895 12.47 0.00 36.91 2.40
2465 2702 0.320334 TTGAGCTGGATTTGCGTCGA 60.320 50.000 0.00 0.00 35.28 4.20
2478 2715 2.859165 TCCCGACTCATTTTTGAGCT 57.141 45.000 2.98 0.00 39.42 4.09
2625 2867 3.191371 GGGCACTTACAAGGAGTTCAATG 59.809 47.826 0.00 0.00 0.00 2.82
2695 2940 0.608856 ATGCGCCTGACATTGTCCAA 60.609 50.000 14.05 0.00 0.00 3.53
2701 2946 0.961857 TTGCAGATGCGCCTGACATT 60.962 50.000 16.59 0.00 45.83 2.71
2720 2965 3.191371 GCCAGAACCATTTTCGAACTCAT 59.809 43.478 0.00 0.00 0.00 2.90
2741 2986 5.229921 TGAATTAACATTCGCTTACCTGC 57.770 39.130 0.00 0.00 41.77 4.85
2804 3050 4.343526 CACTAGTCTTGAGGGTGCATATCT 59.656 45.833 0.00 0.00 0.00 1.98
2848 3157 4.622260 AAATTTTCACAAGACATGGGGG 57.378 40.909 0.00 0.00 31.35 5.40
2877 3186 6.377780 TGTGATGACCAAAATAATTCACACG 58.622 36.000 0.00 0.00 37.62 4.49
2879 3188 7.448161 ACTCTGTGATGACCAAAATAATTCACA 59.552 33.333 0.00 0.00 39.53 3.58
2881 3192 7.665145 TCACTCTGTGATGACCAAAATAATTCA 59.335 33.333 0.00 0.00 37.67 2.57
2887 3198 4.330250 CCTCACTCTGTGATGACCAAAAT 58.670 43.478 0.65 0.00 41.94 1.82
2888 3199 3.496692 CCCTCACTCTGTGATGACCAAAA 60.497 47.826 0.65 0.00 41.94 2.44
2903 3215 2.343625 AGAAAAGCTCTTCCCCTCACT 58.656 47.619 0.00 0.00 0.00 3.41
2987 3299 2.140138 AGCCAAACCAAACAGGGCC 61.140 57.895 0.00 0.00 45.72 5.80
2988 3300 1.069596 CAGCCAAACCAAACAGGGC 59.930 57.895 0.00 0.00 43.89 5.19
2989 3301 0.104671 CACAGCCAAACCAAACAGGG 59.895 55.000 0.00 0.00 43.89 4.45
2990 3302 0.104671 CCACAGCCAAACCAAACAGG 59.895 55.000 0.00 0.00 45.67 4.00
2991 3303 1.110442 TCCACAGCCAAACCAAACAG 58.890 50.000 0.00 0.00 0.00 3.16
2994 3306 3.037549 AGAAATCCACAGCCAAACCAAA 58.962 40.909 0.00 0.00 0.00 3.28
2995 3307 2.676748 AGAAATCCACAGCCAAACCAA 58.323 42.857 0.00 0.00 0.00 3.67
2996 3308 2.380064 AGAAATCCACAGCCAAACCA 57.620 45.000 0.00 0.00 0.00 3.67
2998 3310 4.686091 GCTTTTAGAAATCCACAGCCAAAC 59.314 41.667 0.00 0.00 0.00 2.93
2999 3311 4.343526 TGCTTTTAGAAATCCACAGCCAAA 59.656 37.500 0.00 0.00 0.00 3.28
3000 3312 3.894427 TGCTTTTAGAAATCCACAGCCAA 59.106 39.130 0.00 0.00 0.00 4.52
3001 3313 3.495331 TGCTTTTAGAAATCCACAGCCA 58.505 40.909 0.00 0.00 0.00 4.75
3002 3314 3.674410 GCTGCTTTTAGAAATCCACAGCC 60.674 47.826 0.00 0.00 42.58 4.85
3003 3315 3.505836 GCTGCTTTTAGAAATCCACAGC 58.494 45.455 0.00 0.00 42.00 4.40
3004 3316 4.217118 ACAGCTGCTTTTAGAAATCCACAG 59.783 41.667 15.27 0.00 0.00 3.66
3005 3317 4.144297 ACAGCTGCTTTTAGAAATCCACA 58.856 39.130 15.27 0.00 0.00 4.17
3006 3318 4.773323 ACAGCTGCTTTTAGAAATCCAC 57.227 40.909 15.27 0.00 0.00 4.02
3007 3319 6.892658 TTTACAGCTGCTTTTAGAAATCCA 57.107 33.333 15.27 0.00 0.00 3.41
3038 3350 3.781079 TTCACAGCTGTTTTTCCACAG 57.219 42.857 18.94 2.28 46.15 3.66
3039 3351 4.527509 TTTTCACAGCTGTTTTTCCACA 57.472 36.364 18.94 0.00 0.00 4.17
3040 3352 5.812127 AGATTTTTCACAGCTGTTTTTCCAC 59.188 36.000 18.94 7.35 0.00 4.02
3041 3353 5.811613 CAGATTTTTCACAGCTGTTTTTCCA 59.188 36.000 18.94 0.00 0.00 3.53
3042 3354 6.042143 TCAGATTTTTCACAGCTGTTTTTCC 58.958 36.000 18.94 3.55 0.00 3.13
3043 3355 7.223387 ACATCAGATTTTTCACAGCTGTTTTTC 59.777 33.333 18.94 8.57 0.00 2.29
3044 3356 7.010738 CACATCAGATTTTTCACAGCTGTTTTT 59.989 33.333 18.94 0.00 0.00 1.94
3045 3357 6.477688 CACATCAGATTTTTCACAGCTGTTTT 59.522 34.615 18.94 0.00 0.00 2.43
3046 3358 5.981315 CACATCAGATTTTTCACAGCTGTTT 59.019 36.000 18.94 0.00 0.00 2.83
3047 3359 5.300034 TCACATCAGATTTTTCACAGCTGTT 59.700 36.000 18.94 0.15 0.00 3.16
3048 3360 4.823442 TCACATCAGATTTTTCACAGCTGT 59.177 37.500 15.25 15.25 0.00 4.40
3049 3361 5.366829 TCACATCAGATTTTTCACAGCTG 57.633 39.130 13.48 13.48 0.00 4.24
3050 3362 6.395426 TTTCACATCAGATTTTTCACAGCT 57.605 33.333 0.00 0.00 0.00 4.24
3051 3363 7.436080 TCTTTTTCACATCAGATTTTTCACAGC 59.564 33.333 0.00 0.00 0.00 4.40
3052 3364 8.861033 TCTTTTTCACATCAGATTTTTCACAG 57.139 30.769 0.00 0.00 0.00 3.66
3053 3365 9.251792 CATCTTTTTCACATCAGATTTTTCACA 57.748 29.630 0.00 0.00 0.00 3.58
3054 3366 9.252962 ACATCTTTTTCACATCAGATTTTTCAC 57.747 29.630 0.00 0.00 0.00 3.18
3057 3369 9.918630 CCTACATCTTTTTCACATCAGATTTTT 57.081 29.630 0.00 0.00 0.00 1.94
3058 3370 9.082313 ACCTACATCTTTTTCACATCAGATTTT 57.918 29.630 0.00 0.00 0.00 1.82
3059 3371 8.641498 ACCTACATCTTTTTCACATCAGATTT 57.359 30.769 0.00 0.00 0.00 2.17
3060 3372 7.884877 TGACCTACATCTTTTTCACATCAGATT 59.115 33.333 0.00 0.00 0.00 2.40
3061 3373 7.397221 TGACCTACATCTTTTTCACATCAGAT 58.603 34.615 0.00 0.00 0.00 2.90
3062 3374 6.768483 TGACCTACATCTTTTTCACATCAGA 58.232 36.000 0.00 0.00 0.00 3.27
3063 3375 7.621428 ATGACCTACATCTTTTTCACATCAG 57.379 36.000 0.00 0.00 33.46 2.90
3064 3376 8.298854 CAAATGACCTACATCTTTTTCACATCA 58.701 33.333 0.00 0.00 38.38 3.07
3065 3377 7.756722 CCAAATGACCTACATCTTTTTCACATC 59.243 37.037 0.00 0.00 38.38 3.06
3066 3378 7.605449 CCAAATGACCTACATCTTTTTCACAT 58.395 34.615 0.00 0.00 38.38 3.21
3067 3379 6.516527 GCCAAATGACCTACATCTTTTTCACA 60.517 38.462 0.00 0.00 38.38 3.58
3068 3380 5.863935 GCCAAATGACCTACATCTTTTTCAC 59.136 40.000 0.00 0.00 38.38 3.18
3069 3381 5.538053 TGCCAAATGACCTACATCTTTTTCA 59.462 36.000 0.00 0.00 38.38 2.69
3070 3382 6.024552 TGCCAAATGACCTACATCTTTTTC 57.975 37.500 0.00 0.00 38.38 2.29
3071 3383 6.418057 TTGCCAAATGACCTACATCTTTTT 57.582 33.333 0.00 0.00 38.38 1.94
3072 3384 6.223120 GTTTGCCAAATGACCTACATCTTTT 58.777 36.000 0.00 0.00 38.38 2.27
3073 3385 5.279456 GGTTTGCCAAATGACCTACATCTTT 60.279 40.000 0.00 0.00 34.76 2.52
3074 3386 4.220602 GGTTTGCCAAATGACCTACATCTT 59.779 41.667 0.00 0.00 34.76 2.40
3075 3387 3.763897 GGTTTGCCAAATGACCTACATCT 59.236 43.478 0.00 0.00 34.76 2.90
3076 3388 3.509575 TGGTTTGCCAAATGACCTACATC 59.490 43.478 0.00 0.00 42.83 3.06
3077 3389 3.505386 TGGTTTGCCAAATGACCTACAT 58.495 40.909 0.00 0.00 42.83 2.29
3078 3390 2.890311 CTGGTTTGCCAAATGACCTACA 59.110 45.455 0.00 0.00 45.51 2.74
3079 3391 2.352715 GCTGGTTTGCCAAATGACCTAC 60.353 50.000 0.00 0.00 45.51 3.18
3080 3392 1.892474 GCTGGTTTGCCAAATGACCTA 59.108 47.619 0.00 0.00 45.51 3.08
3081 3393 0.681175 GCTGGTTTGCCAAATGACCT 59.319 50.000 0.00 0.00 45.51 3.85
3082 3394 0.681175 AGCTGGTTTGCCAAATGACC 59.319 50.000 0.00 0.00 45.51 4.02
3083 3395 1.340889 TCAGCTGGTTTGCCAAATGAC 59.659 47.619 15.13 0.00 45.51 3.06
3084 3396 1.702182 TCAGCTGGTTTGCCAAATGA 58.298 45.000 15.13 0.00 45.51 2.57
3085 3397 2.754946 ATCAGCTGGTTTGCCAAATG 57.245 45.000 15.13 0.00 45.51 2.32
3086 3398 5.779529 CTATATCAGCTGGTTTGCCAAAT 57.220 39.130 15.13 0.00 45.51 2.32
3099 3411 9.230932 GTCAAAATCTGAAAAAGCTATATCAGC 57.769 33.333 14.51 0.00 42.86 4.26
3100 3412 9.727627 GGTCAAAATCTGAAAAAGCTATATCAG 57.272 33.333 13.58 13.58 40.46 2.90
3101 3413 8.686334 GGGTCAAAATCTGAAAAAGCTATATCA 58.314 33.333 0.00 0.00 35.22 2.15
3102 3414 8.907885 AGGGTCAAAATCTGAAAAAGCTATATC 58.092 33.333 0.00 0.00 35.22 1.63
3103 3415 8.829373 AGGGTCAAAATCTGAAAAAGCTATAT 57.171 30.769 0.00 0.00 35.22 0.86
3104 3416 7.888021 TGAGGGTCAAAATCTGAAAAAGCTATA 59.112 33.333 0.00 0.00 35.22 1.31
3105 3417 6.721208 TGAGGGTCAAAATCTGAAAAAGCTAT 59.279 34.615 0.00 0.00 35.22 2.97
3106 3418 6.068010 TGAGGGTCAAAATCTGAAAAAGCTA 58.932 36.000 0.00 0.00 35.22 3.32
3107 3419 4.895297 TGAGGGTCAAAATCTGAAAAAGCT 59.105 37.500 0.00 0.00 35.22 3.74
3108 3420 5.200368 TGAGGGTCAAAATCTGAAAAAGC 57.800 39.130 0.00 0.00 35.22 3.51
3109 3421 5.225642 GCTGAGGGTCAAAATCTGAAAAAG 58.774 41.667 0.00 0.00 35.22 2.27
3110 3422 4.261572 CGCTGAGGGTCAAAATCTGAAAAA 60.262 41.667 0.00 0.00 35.22 1.94
3111 3423 3.253188 CGCTGAGGGTCAAAATCTGAAAA 59.747 43.478 0.00 0.00 35.22 2.29
3112 3424 2.813754 CGCTGAGGGTCAAAATCTGAAA 59.186 45.455 0.00 0.00 35.22 2.69
3113 3425 2.426522 CGCTGAGGGTCAAAATCTGAA 58.573 47.619 0.00 0.00 35.22 3.02
3114 3426 1.339055 CCGCTGAGGGTCAAAATCTGA 60.339 52.381 0.00 0.00 35.97 3.27
3115 3427 1.089920 CCGCTGAGGGTCAAAATCTG 58.910 55.000 0.00 0.00 35.97 2.90
3116 3428 0.984230 TCCGCTGAGGGTCAAAATCT 59.016 50.000 0.00 0.00 41.52 2.40
3117 3429 1.821216 TTCCGCTGAGGGTCAAAATC 58.179 50.000 0.00 0.00 41.52 2.17
3118 3430 2.290896 TGATTCCGCTGAGGGTCAAAAT 60.291 45.455 0.00 0.00 41.52 1.82
3119 3431 1.073125 TGATTCCGCTGAGGGTCAAAA 59.927 47.619 0.00 0.00 41.52 2.44
3120 3432 0.690192 TGATTCCGCTGAGGGTCAAA 59.310 50.000 0.00 0.00 41.52 2.69
3121 3433 0.250234 CTGATTCCGCTGAGGGTCAA 59.750 55.000 0.00 0.00 41.52 3.18
3122 3434 0.614697 TCTGATTCCGCTGAGGGTCA 60.615 55.000 0.00 2.31 41.52 4.02
3123 3435 0.755686 ATCTGATTCCGCTGAGGGTC 59.244 55.000 0.00 0.00 41.52 4.46
3124 3436 1.207791 AATCTGATTCCGCTGAGGGT 58.792 50.000 0.00 0.00 41.52 4.34
3125 3437 2.338577 AAATCTGATTCCGCTGAGGG 57.661 50.000 2.92 0.00 41.52 4.30
3126 3438 2.357009 CCAAAATCTGATTCCGCTGAGG 59.643 50.000 2.92 0.00 42.97 3.86
3127 3439 3.273434 TCCAAAATCTGATTCCGCTGAG 58.727 45.455 2.92 0.00 0.00 3.35
3128 3440 3.348647 TCCAAAATCTGATTCCGCTGA 57.651 42.857 2.92 0.00 0.00 4.26
3129 3441 4.418392 CTTTCCAAAATCTGATTCCGCTG 58.582 43.478 2.92 0.03 0.00 5.18
3130 3442 3.119352 GCTTTCCAAAATCTGATTCCGCT 60.119 43.478 2.92 0.00 0.00 5.52
3131 3443 3.182182 GCTTTCCAAAATCTGATTCCGC 58.818 45.455 2.92 0.00 0.00 5.54
3132 3444 4.168760 GTGCTTTCCAAAATCTGATTCCG 58.831 43.478 2.92 0.00 0.00 4.30
3133 3445 4.168760 CGTGCTTTCCAAAATCTGATTCC 58.831 43.478 2.92 0.00 0.00 3.01
3134 3446 4.798574 ACGTGCTTTCCAAAATCTGATTC 58.201 39.130 2.92 0.00 0.00 2.52
3135 3447 4.321230 GGACGTGCTTTCCAAAATCTGATT 60.321 41.667 0.00 0.00 32.82 2.57
3136 3448 3.191371 GGACGTGCTTTCCAAAATCTGAT 59.809 43.478 0.00 0.00 32.82 2.90
3137 3449 2.552315 GGACGTGCTTTCCAAAATCTGA 59.448 45.455 0.00 0.00 32.82 3.27
3138 3450 2.554032 AGGACGTGCTTTCCAAAATCTG 59.446 45.455 2.68 0.00 35.33 2.90
3139 3451 2.814336 GAGGACGTGCTTTCCAAAATCT 59.186 45.455 12.08 0.00 35.33 2.40
3140 3452 2.552315 TGAGGACGTGCTTTCCAAAATC 59.448 45.455 12.08 0.00 35.33 2.17
3141 3453 2.554032 CTGAGGACGTGCTTTCCAAAAT 59.446 45.455 12.08 0.00 35.33 1.82
3142 3454 1.946768 CTGAGGACGTGCTTTCCAAAA 59.053 47.619 12.08 0.00 35.33 2.44
3143 3455 1.593196 CTGAGGACGTGCTTTCCAAA 58.407 50.000 12.08 0.00 35.33 3.28
3144 3456 0.884704 GCTGAGGACGTGCTTTCCAA 60.885 55.000 12.08 0.00 35.33 3.53
3145 3457 1.301716 GCTGAGGACGTGCTTTCCA 60.302 57.895 12.08 3.72 35.33 3.53
3146 3458 1.004440 AGCTGAGGACGTGCTTTCC 60.004 57.895 12.08 0.00 32.61 3.13
3147 3459 1.905922 GCAGCTGAGGACGTGCTTTC 61.906 60.000 20.43 0.00 34.51 2.62
3148 3460 1.963338 GCAGCTGAGGACGTGCTTT 60.963 57.895 20.43 0.00 34.51 3.51
3149 3461 2.358003 GCAGCTGAGGACGTGCTT 60.358 61.111 20.43 0.00 34.51 3.91
3150 3462 3.309506 AGCAGCTGAGGACGTGCT 61.310 61.111 20.43 10.23 41.47 4.40
3151 3463 1.905922 GAAAGCAGCTGAGGACGTGC 61.906 60.000 20.43 0.00 36.10 5.34
3152 3464 1.621301 CGAAAGCAGCTGAGGACGTG 61.621 60.000 20.43 0.00 0.00 4.49
3153 3465 1.373497 CGAAAGCAGCTGAGGACGT 60.373 57.895 20.43 0.00 0.00 4.34
3154 3466 3.468007 CGAAAGCAGCTGAGGACG 58.532 61.111 20.43 13.20 0.00 4.79
3166 3478 6.413526 GCCAAAATTTAAACCAAAAGCGAAAG 59.586 34.615 0.00 0.00 0.00 2.62
3167 3479 6.128007 TGCCAAAATTTAAACCAAAAGCGAAA 60.128 30.769 0.00 0.00 0.00 3.46
3168 3480 5.354234 TGCCAAAATTTAAACCAAAAGCGAA 59.646 32.000 0.00 0.00 0.00 4.70
3169 3481 4.876107 TGCCAAAATTTAAACCAAAAGCGA 59.124 33.333 0.00 0.00 0.00 4.93
3170 3482 5.162000 TGCCAAAATTTAAACCAAAAGCG 57.838 34.783 0.00 0.00 0.00 4.68
3171 3483 6.130298 ACTGCCAAAATTTAAACCAAAAGC 57.870 33.333 0.00 0.00 0.00 3.51
3172 3484 8.655651 TCTACTGCCAAAATTTAAACCAAAAG 57.344 30.769 0.00 0.00 0.00 2.27
3173 3485 9.620259 AATCTACTGCCAAAATTTAAACCAAAA 57.380 25.926 0.00 0.00 0.00 2.44
3174 3486 9.620259 AAATCTACTGCCAAAATTTAAACCAAA 57.380 25.926 0.00 0.00 0.00 3.28
3175 3487 9.267084 GAAATCTACTGCCAAAATTTAAACCAA 57.733 29.630 0.00 0.00 0.00 3.67
3176 3488 8.646900 AGAAATCTACTGCCAAAATTTAAACCA 58.353 29.630 0.00 0.00 0.00 3.67
3177 3489 8.925700 CAGAAATCTACTGCCAAAATTTAAACC 58.074 33.333 0.00 0.00 0.00 3.27
3178 3490 9.691362 TCAGAAATCTACTGCCAAAATTTAAAC 57.309 29.630 0.00 0.00 35.61 2.01
3182 3494 9.428097 GATTTCAGAAATCTACTGCCAAAATTT 57.572 29.630 23.60 0.00 43.08 1.82
3183 3495 8.587608 TGATTTCAGAAATCTACTGCCAAAATT 58.412 29.630 28.42 0.00 45.85 1.82
3184 3496 8.125978 TGATTTCAGAAATCTACTGCCAAAAT 57.874 30.769 28.42 0.00 45.85 1.82
3185 3497 7.523293 TGATTTCAGAAATCTACTGCCAAAA 57.477 32.000 28.42 8.67 45.85 2.44
3186 3498 7.523293 TTGATTTCAGAAATCTACTGCCAAA 57.477 32.000 28.42 14.24 45.85 3.28
3187 3499 7.523293 TTTGATTTCAGAAATCTACTGCCAA 57.477 32.000 28.42 15.29 45.85 4.52
3188 3500 7.707624 ATTTGATTTCAGAAATCTACTGCCA 57.292 32.000 28.42 12.25 45.85 4.92
3189 3501 8.465201 AGAATTTGATTTCAGAAATCTACTGCC 58.535 33.333 28.42 16.63 45.85 4.85
3195 3507 8.964772 CCCAGTAGAATTTGATTTCAGAAATCT 58.035 33.333 28.42 15.51 45.85 2.40
3196 3508 8.743714 ACCCAGTAGAATTTGATTTCAGAAATC 58.256 33.333 23.97 23.97 45.86 2.17
3197 3509 8.655935 ACCCAGTAGAATTTGATTTCAGAAAT 57.344 30.769 8.20 8.20 0.00 2.17
3198 3510 8.477419 AACCCAGTAGAATTTGATTTCAGAAA 57.523 30.769 0.00 0.00 0.00 2.52
3199 3511 7.094805 CGAACCCAGTAGAATTTGATTTCAGAA 60.095 37.037 0.00 0.00 0.00 3.02
3200 3512 6.371548 CGAACCCAGTAGAATTTGATTTCAGA 59.628 38.462 0.00 0.00 0.00 3.27
3201 3513 6.403636 CCGAACCCAGTAGAATTTGATTTCAG 60.404 42.308 0.00 0.00 0.00 3.02
3202 3514 5.414454 CCGAACCCAGTAGAATTTGATTTCA 59.586 40.000 0.00 0.00 0.00 2.69
3203 3515 5.676331 GCCGAACCCAGTAGAATTTGATTTC 60.676 44.000 0.00 0.00 0.00 2.17
3204 3516 4.157840 GCCGAACCCAGTAGAATTTGATTT 59.842 41.667 0.00 0.00 0.00 2.17
3205 3517 3.694566 GCCGAACCCAGTAGAATTTGATT 59.305 43.478 0.00 0.00 0.00 2.57
3206 3518 3.279434 GCCGAACCCAGTAGAATTTGAT 58.721 45.455 0.00 0.00 0.00 2.57
3207 3519 2.617021 GGCCGAACCCAGTAGAATTTGA 60.617 50.000 0.00 0.00 0.00 2.69
3208 3520 1.743394 GGCCGAACCCAGTAGAATTTG 59.257 52.381 0.00 0.00 0.00 2.32
3209 3521 1.633945 AGGCCGAACCCAGTAGAATTT 59.366 47.619 0.00 0.00 40.58 1.82
3210 3522 1.286248 AGGCCGAACCCAGTAGAATT 58.714 50.000 0.00 0.00 40.58 2.17
3211 3523 1.286248 AAGGCCGAACCCAGTAGAAT 58.714 50.000 0.00 0.00 40.58 2.40
3212 3524 1.061546 AAAGGCCGAACCCAGTAGAA 58.938 50.000 0.00 0.00 40.58 2.10
3213 3525 1.061546 AAAAGGCCGAACCCAGTAGA 58.938 50.000 0.00 0.00 40.58 2.59
3214 3526 1.165270 CAAAAGGCCGAACCCAGTAG 58.835 55.000 0.00 0.00 40.58 2.57
3215 3527 0.475044 ACAAAAGGCCGAACCCAGTA 59.525 50.000 0.00 0.00 40.58 2.74
3216 3528 0.396556 AACAAAAGGCCGAACCCAGT 60.397 50.000 0.00 0.00 40.58 4.00
3217 3529 0.313987 GAACAAAAGGCCGAACCCAG 59.686 55.000 0.00 0.00 40.58 4.45
3218 3530 0.395862 TGAACAAAAGGCCGAACCCA 60.396 50.000 0.00 0.00 40.58 4.51
3219 3531 0.747852 TTGAACAAAAGGCCGAACCC 59.252 50.000 0.00 0.00 40.58 4.11
3220 3532 2.588027 TTTGAACAAAAGGCCGAACC 57.412 45.000 0.00 0.00 39.61 3.62
3221 3533 4.209080 CAGAATTTGAACAAAAGGCCGAAC 59.791 41.667 0.00 0.00 33.56 3.95
3222 3534 4.098654 TCAGAATTTGAACAAAAGGCCGAA 59.901 37.500 0.00 0.00 33.56 4.30
3223 3535 3.634448 TCAGAATTTGAACAAAAGGCCGA 59.366 39.130 0.00 0.00 33.56 5.54
3224 3536 3.976169 TCAGAATTTGAACAAAAGGCCG 58.024 40.909 0.00 0.00 33.56 6.13
3225 3537 4.152938 GCATCAGAATTTGAACAAAAGGCC 59.847 41.667 0.00 0.00 39.77 5.19
3226 3538 4.143263 CGCATCAGAATTTGAACAAAAGGC 60.143 41.667 4.12 0.82 39.77 4.35
3227 3539 4.143263 GCGCATCAGAATTTGAACAAAAGG 60.143 41.667 0.30 0.00 39.77 3.11
3228 3540 4.431986 CGCGCATCAGAATTTGAACAAAAG 60.432 41.667 8.75 0.00 39.77 2.27
3229 3541 3.424861 CGCGCATCAGAATTTGAACAAAA 59.575 39.130 8.75 0.00 39.77 2.44
3230 3542 2.979151 CGCGCATCAGAATTTGAACAAA 59.021 40.909 8.75 2.48 39.77 2.83
3231 3543 2.583739 CGCGCATCAGAATTTGAACAA 58.416 42.857 8.75 0.00 39.77 2.83
3232 3544 1.135717 CCGCGCATCAGAATTTGAACA 60.136 47.619 8.75 0.00 39.77 3.18
3233 3545 1.538276 CCGCGCATCAGAATTTGAAC 58.462 50.000 8.75 0.00 39.77 3.18
3234 3546 0.179166 GCCGCGCATCAGAATTTGAA 60.179 50.000 8.75 0.00 39.77 2.69
3235 3547 1.304509 TGCCGCGCATCAGAATTTGA 61.305 50.000 8.75 0.00 40.85 2.69
3236 3548 0.864377 CTGCCGCGCATCAGAATTTG 60.864 55.000 17.90 0.00 38.13 2.32
3237 3549 1.430632 CTGCCGCGCATCAGAATTT 59.569 52.632 17.90 0.00 38.13 1.82
3238 3550 3.104766 CTGCCGCGCATCAGAATT 58.895 55.556 17.90 0.00 38.13 2.17
3239 3551 3.580193 GCTGCCGCGCATCAGAAT 61.580 61.111 24.53 0.00 38.13 2.40
3257 3569 3.454375 TCAGCTTTTATCGACGGATTCC 58.546 45.455 0.00 0.00 34.00 3.01
3258 3570 4.260253 GGTTCAGCTTTTATCGACGGATTC 60.260 45.833 0.00 0.00 34.00 2.52
3259 3571 3.621715 GGTTCAGCTTTTATCGACGGATT 59.378 43.478 0.00 0.00 34.00 3.01
3260 3572 3.195661 GGTTCAGCTTTTATCGACGGAT 58.804 45.455 0.00 0.00 36.65 4.18
3261 3573 2.028839 TGGTTCAGCTTTTATCGACGGA 60.029 45.455 0.00 0.00 0.00 4.69
3262 3574 2.343101 TGGTTCAGCTTTTATCGACGG 58.657 47.619 0.00 0.00 0.00 4.79
3263 3575 4.148891 GTTTGGTTCAGCTTTTATCGACG 58.851 43.478 0.00 0.00 0.00 5.12
3264 3576 5.103290 TGTTTGGTTCAGCTTTTATCGAC 57.897 39.130 0.00 0.00 0.00 4.20
3265 3577 4.215399 CCTGTTTGGTTCAGCTTTTATCGA 59.785 41.667 0.00 0.00 0.00 3.59
3266 3578 4.475944 CCTGTTTGGTTCAGCTTTTATCG 58.524 43.478 0.00 0.00 0.00 2.92
3267 3579 4.809673 CCCTGTTTGGTTCAGCTTTTATC 58.190 43.478 0.00 0.00 0.00 1.75
3268 3580 3.006859 GCCCTGTTTGGTTCAGCTTTTAT 59.993 43.478 0.00 0.00 0.00 1.40
3269 3581 2.364002 GCCCTGTTTGGTTCAGCTTTTA 59.636 45.455 0.00 0.00 0.00 1.52
3270 3582 1.138859 GCCCTGTTTGGTTCAGCTTTT 59.861 47.619 0.00 0.00 0.00 2.27
3271 3583 0.752658 GCCCTGTTTGGTTCAGCTTT 59.247 50.000 0.00 0.00 0.00 3.51
3272 3584 1.115326 GGCCCTGTTTGGTTCAGCTT 61.115 55.000 0.00 0.00 0.00 3.74
3273 3585 1.531602 GGCCCTGTTTGGTTCAGCT 60.532 57.895 0.00 0.00 0.00 4.24
3274 3586 0.251165 TAGGCCCTGTTTGGTTCAGC 60.251 55.000 0.00 0.00 0.00 4.26
3275 3587 2.286365 TTAGGCCCTGTTTGGTTCAG 57.714 50.000 0.00 0.00 0.00 3.02
3276 3588 2.593026 CTTTAGGCCCTGTTTGGTTCA 58.407 47.619 0.00 0.00 0.00 3.18
3277 3589 1.272490 GCTTTAGGCCCTGTTTGGTTC 59.728 52.381 0.00 0.00 34.27 3.62
3278 3590 1.338107 GCTTTAGGCCCTGTTTGGTT 58.662 50.000 0.00 0.00 34.27 3.67
3279 3591 0.187361 TGCTTTAGGCCCTGTTTGGT 59.813 50.000 0.00 0.00 40.92 3.67
3280 3592 1.273327 CTTGCTTTAGGCCCTGTTTGG 59.727 52.381 0.00 0.00 40.92 3.28
3281 3593 1.337167 GCTTGCTTTAGGCCCTGTTTG 60.337 52.381 0.00 0.00 40.92 2.93
3282 3594 0.969149 GCTTGCTTTAGGCCCTGTTT 59.031 50.000 0.00 0.00 40.92 2.83
3283 3595 0.900182 GGCTTGCTTTAGGCCCTGTT 60.900 55.000 0.00 0.00 45.39 3.16
3284 3596 1.304464 GGCTTGCTTTAGGCCCTGT 60.304 57.895 0.00 0.00 45.39 4.00
3285 3597 3.608432 GGCTTGCTTTAGGCCCTG 58.392 61.111 0.00 0.00 45.39 4.45
3289 3601 2.293170 CTCCTTAGGCTTGCTTTAGGC 58.707 52.381 5.13 0.00 40.76 3.93
3290 3602 2.505819 TCCTCCTTAGGCTTGCTTTAGG 59.494 50.000 0.00 3.81 43.31 2.69
3291 3603 3.914426 TCCTCCTTAGGCTTGCTTTAG 57.086 47.619 0.00 0.00 43.31 1.85
3292 3604 4.227300 TCAATCCTCCTTAGGCTTGCTTTA 59.773 41.667 0.00 0.00 45.01 1.85
3293 3605 3.010584 TCAATCCTCCTTAGGCTTGCTTT 59.989 43.478 0.00 0.00 45.01 3.51
3384 3711 2.526077 GTTCGTCGTCATGTGAGCATA 58.474 47.619 0.00 0.00 33.30 3.14
3392 3719 1.060713 GTGTCAGGTTCGTCGTCATG 58.939 55.000 0.00 0.00 0.00 3.07
3457 3787 6.429385 ACTTCTTGGATTTCTACTTGCTCTTG 59.571 38.462 0.00 0.00 0.00 3.02
3467 3797 4.567747 GCCCTTGGACTTCTTGGATTTCTA 60.568 45.833 0.00 0.00 0.00 2.10
3549 3879 5.076182 TCTCCAATGTAGGCAAATGTTTCA 58.924 37.500 0.00 0.00 0.00 2.69
3559 3889 5.453567 ACAAGTTTTTCTCCAATGTAGGC 57.546 39.130 0.00 0.00 0.00 3.93
3563 3893 7.893302 TGGGATATACAAGTTTTTCTCCAATGT 59.107 33.333 0.00 0.00 0.00 2.71
3651 3981 2.856628 CGGCACCTGCTATCCGCTA 61.857 63.158 0.00 0.00 41.70 4.26
3653 3983 4.530857 ACGGCACCTGCTATCCGC 62.531 66.667 0.00 0.00 45.23 5.54
3668 3998 0.110056 GCACATCCAAGCAGAACACG 60.110 55.000 0.00 0.00 0.00 4.49
3721 4056 2.003301 GTAGCAGCAGCAGTAAGGAAC 58.997 52.381 3.17 0.00 45.49 3.62
3722 4057 1.902508 AGTAGCAGCAGCAGTAAGGAA 59.097 47.619 3.17 0.00 45.49 3.36
3723 4058 1.561643 AGTAGCAGCAGCAGTAAGGA 58.438 50.000 3.17 0.00 45.49 3.36
3724 4059 2.428890 AGTAGTAGCAGCAGCAGTAAGG 59.571 50.000 3.17 0.00 45.49 2.69
3725 4060 3.791973 AGTAGTAGCAGCAGCAGTAAG 57.208 47.619 3.17 0.00 45.49 2.34
3726 4061 4.902443 CTAGTAGTAGCAGCAGCAGTAA 57.098 45.455 3.17 0.00 45.49 2.24
3788 4123 2.231964 TGGGTCTGCAATGAAAAGATGC 59.768 45.455 0.00 0.00 40.45 3.91
3802 4137 3.636764 ACTTTTTGGCTTAACTGGGTCTG 59.363 43.478 0.00 0.00 0.00 3.51
3803 4138 3.910989 ACTTTTTGGCTTAACTGGGTCT 58.089 40.909 0.00 0.00 0.00 3.85
3822 4157 5.084519 TCACAGGGATGAACTGTAACTACT 58.915 41.667 0.00 0.00 46.76 2.57
3823 4158 5.401531 TCACAGGGATGAACTGTAACTAC 57.598 43.478 0.00 0.00 46.76 2.73
3899 4284 7.141363 GTCTAGTTTCCGTTTGTCAAGTACTA 58.859 38.462 0.00 0.00 0.00 1.82
3996 4422 5.543714 AGCTGAGAGATGCTATCAATCTTG 58.456 41.667 0.00 0.00 37.81 3.02
4004 4430 4.443175 CCAGTCAAAGCTGAGAGATGCTAT 60.443 45.833 0.00 0.00 38.75 2.97
4023 4449 1.136828 TACAAGCCCTCACAACCAGT 58.863 50.000 0.00 0.00 0.00 4.00
4024 4450 1.072331 AGTACAAGCCCTCACAACCAG 59.928 52.381 0.00 0.00 0.00 4.00
4082 4624 3.858247 AGTGGCAGACGAAGGTAAATAC 58.142 45.455 0.00 0.00 0.00 1.89
4099 4641 1.586154 CCGGCAAAACAGGCTAGTGG 61.586 60.000 0.00 0.00 0.00 4.00
4127 4669 7.148018 CCACATAATTAGCTGGAACTTCACATT 60.148 37.037 0.00 0.00 0.00 2.71
4162 4704 4.018688 AGAAAGGGCCTAATACTTTCCGTT 60.019 41.667 21.07 6.77 46.92 4.44
4193 4780 3.826157 TGTGGGGATTGAAAAGTGATCAC 59.174 43.478 18.47 18.47 0.00 3.06
4261 4854 0.431233 CAGTTTTGCTCGTCGACTCG 59.569 55.000 14.70 5.29 0.00 4.18
4274 5127 5.906073 AGTCTGTTTTAGCAATGCAGTTTT 58.094 33.333 8.35 0.00 0.00 2.43
4346 7455 4.929808 GTGTTGAGAATTGGTCGTATGTCT 59.070 41.667 0.00 0.00 0.00 3.41
4352 7461 0.865769 GCGTGTTGAGAATTGGTCGT 59.134 50.000 0.00 0.00 0.00 4.34
4394 7548 5.135330 CGAATGCTATCATCACATCGTTTG 58.865 41.667 0.00 0.00 31.27 2.93
4427 7581 2.027285 TGCTTGCATTACTCTGTGCCTA 60.027 45.455 0.00 0.00 40.56 3.93



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.