Multiple sequence alignment - TraesCS2A01G438700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G438700 chr2A 100.000 2324 0 0 1 2324 689805948 689803625 0.000000e+00 4292.0
1 TraesCS2A01G438700 chr2A 89.043 1223 65 29 520 1712 689761741 689760558 0.000000e+00 1452.0
2 TraesCS2A01G438700 chr2A 84.756 1312 111 52 619 1902 689770019 689768769 0.000000e+00 1232.0
3 TraesCS2A01G438700 chr2A 97.778 45 1 0 594 638 689770064 689770020 6.880000e-11 78.7
4 TraesCS2A01G438700 chr2A 100.000 28 0 0 428 455 377770474 377770501 4.000000e-03 52.8
5 TraesCS2A01G438700 chr2D 85.575 1227 123 38 745 1950 546733350 546734543 0.000000e+00 1236.0
6 TraesCS2A01G438700 chr2D 86.775 1051 104 26 745 1772 546682364 546683402 0.000000e+00 1138.0
7 TraesCS2A01G438700 chr2D 86.410 986 89 28 749 1712 546806446 546807408 0.000000e+00 1037.0
8 TraesCS2A01G438700 chr2D 88.485 660 62 7 749 1408 546637592 546638237 0.000000e+00 785.0
9 TraesCS2A01G438700 chr2D 90.476 168 16 0 671 838 546779175 546779342 3.010000e-54 222.0
10 TraesCS2A01G438700 chr2D 80.000 320 47 7 127 430 527677835 527677517 1.080000e-53 220.0
11 TraesCS2A01G438700 chr2D 77.320 388 68 9 127 494 559399244 559398857 6.510000e-51 211.0
12 TraesCS2A01G438700 chr2D 87.730 163 9 8 1544 1699 546638362 546638520 1.830000e-41 180.0
13 TraesCS2A01G438700 chr2D 96.721 61 1 1 1683 1742 546638536 546638596 1.470000e-17 100.0
14 TraesCS2A01G438700 chr2B 91.850 638 52 0 749 1386 653592251 653592888 0.000000e+00 891.0
15 TraesCS2A01G438700 chr2B 85.533 629 86 3 749 1372 653415671 653416299 0.000000e+00 652.0
16 TraesCS2A01G438700 chr2B 89.712 243 22 1 594 833 653583223 653583465 8.070000e-80 307.0
17 TraesCS2A01G438700 chr2B 85.632 174 11 8 1573 1734 653593000 653593171 1.100000e-38 171.0
18 TraesCS2A01G438700 chr2B 77.729 229 31 12 2099 2324 653593537 653593748 3.140000e-24 122.0
19 TraesCS2A01G438700 chr5A 91.080 639 53 3 770 1408 377361906 377362540 0.000000e+00 861.0
20 TraesCS2A01G438700 chr5A 84.043 188 23 4 1574 1755 377363034 377363220 8.540000e-40 174.0
21 TraesCS2A01G438700 chr1D 78.571 392 63 10 121 492 487880717 487881107 2.980000e-59 239.0
22 TraesCS2A01G438700 chr1D 93.694 111 6 1 1 111 412873179 412873070 5.140000e-37 165.0
23 TraesCS2A01G438700 chr1D 93.694 111 6 1 1 111 421877477 421877586 5.140000e-37 165.0
24 TraesCS2A01G438700 chr1D 93.694 111 6 1 1 111 467353850 467353959 5.140000e-37 165.0
25 TraesCS2A01G438700 chr1D 88.462 78 9 0 352 429 379789746 379789669 6.840000e-16 95.3
26 TraesCS2A01G438700 chr7A 78.358 402 62 11 117 493 393325354 393325755 1.070000e-58 237.0
27 TraesCS2A01G438700 chr7A 78.515 377 57 13 127 480 286746751 286747126 2.320000e-55 226.0
28 TraesCS2A01G438700 chr7A 79.688 320 46 11 127 431 6138097 6137782 1.810000e-51 213.0
29 TraesCS2A01G438700 chr7A 74.623 398 72 17 120 492 731293314 731292921 5.170000e-32 148.0
30 TraesCS2A01G438700 chr7A 80.808 99 11 5 2113 2208 49917824 49917917 1.150000e-08 71.3
31 TraesCS2A01G438700 chr5B 78.989 376 53 12 127 479 311547635 311547263 1.390000e-57 233.0
32 TraesCS2A01G438700 chr7B 80.312 320 48 5 127 431 104298718 104298399 6.460000e-56 228.0
33 TraesCS2A01G438700 chr1B 79.525 337 51 7 110 431 168618502 168618835 8.360000e-55 224.0
34 TraesCS2A01G438700 chr1B 75.309 405 69 13 110 493 554186705 554186311 5.140000e-37 165.0
35 TraesCS2A01G438700 chr6B 85.047 214 28 3 126 338 713495353 713495563 5.030000e-52 215.0
36 TraesCS2A01G438700 chr6B 95.455 110 4 1 2 111 164865582 164865474 8.540000e-40 174.0
37 TraesCS2A01G438700 chr7D 79.027 329 54 7 117 430 133887159 133887487 6.510000e-51 211.0
38 TraesCS2A01G438700 chr4D 77.285 383 63 13 120 480 107712827 107712447 1.090000e-48 204.0
39 TraesCS2A01G438700 chr3D 77.005 374 64 11 128 480 576887039 576887411 6.550000e-46 195.0
40 TraesCS2A01G438700 chr3D 93.694 111 6 1 1 111 48967999 48967890 5.140000e-37 165.0
41 TraesCS2A01G438700 chr3D 93.694 111 6 1 1 111 431324736 431324845 5.140000e-37 165.0
42 TraesCS2A01G438700 chr5D 78.125 320 50 8 127 431 551727244 551727558 3.940000e-43 185.0
43 TraesCS2A01G438700 chr5D 93.694 111 6 1 1 111 480485492 480485383 5.140000e-37 165.0
44 TraesCS2A01G438700 chr5D 76.292 329 50 17 128 431 251965850 251966175 1.440000e-32 150.0
45 TraesCS2A01G438700 chrUn 93.694 111 6 1 1 111 19081334 19081225 5.140000e-37 165.0
46 TraesCS2A01G438700 chr4B 93.694 111 6 1 1 111 436245664 436245555 5.140000e-37 165.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G438700 chr2A 689803625 689805948 2323 True 4292.000000 4292 100.000000 1 2324 1 chr2A.!!$R2 2323
1 TraesCS2A01G438700 chr2A 689760558 689761741 1183 True 1452.000000 1452 89.043000 520 1712 1 chr2A.!!$R1 1192
2 TraesCS2A01G438700 chr2A 689768769 689770064 1295 True 655.350000 1232 91.267000 594 1902 2 chr2A.!!$R3 1308
3 TraesCS2A01G438700 chr2D 546733350 546734543 1193 False 1236.000000 1236 85.575000 745 1950 1 chr2D.!!$F2 1205
4 TraesCS2A01G438700 chr2D 546682364 546683402 1038 False 1138.000000 1138 86.775000 745 1772 1 chr2D.!!$F1 1027
5 TraesCS2A01G438700 chr2D 546806446 546807408 962 False 1037.000000 1037 86.410000 749 1712 1 chr2D.!!$F4 963
6 TraesCS2A01G438700 chr2D 546637592 546638596 1004 False 355.000000 785 90.978667 749 1742 3 chr2D.!!$F5 993
7 TraesCS2A01G438700 chr2B 653415671 653416299 628 False 652.000000 652 85.533000 749 1372 1 chr2B.!!$F1 623
8 TraesCS2A01G438700 chr2B 653592251 653593748 1497 False 394.666667 891 85.070333 749 2324 3 chr2B.!!$F3 1575
9 TraesCS2A01G438700 chr5A 377361906 377363220 1314 False 517.500000 861 87.561500 770 1755 2 chr5A.!!$F1 985

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
315 316 0.107654 GGGCCTTAGCATGACGACTT 60.108 55.0 0.84 0.0 42.56 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1617 2010 0.039074 CGTAGCCACAGGGATCGATC 60.039 60.0 17.36 17.36 35.59 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.959671 CTGAGAAAATACTGAGAGTGGAAC 57.040 41.667 0.00 0.00 0.00 3.62
39 40 4.546570 GTGGAACTACACTTTTGCAATCC 58.453 43.478 0.00 1.01 38.32 3.01
40 41 3.572255 TGGAACTACACTTTTGCAATCCC 59.428 43.478 0.00 0.00 0.00 3.85
41 42 3.572255 GGAACTACACTTTTGCAATCCCA 59.428 43.478 0.00 0.00 0.00 4.37
42 43 4.546570 GAACTACACTTTTGCAATCCCAC 58.453 43.478 0.00 0.00 0.00 4.61
43 44 3.832527 ACTACACTTTTGCAATCCCACT 58.167 40.909 0.00 0.00 0.00 4.00
44 45 4.980573 ACTACACTTTTGCAATCCCACTA 58.019 39.130 0.00 0.00 0.00 2.74
45 46 5.570320 ACTACACTTTTGCAATCCCACTAT 58.430 37.500 0.00 0.00 0.00 2.12
46 47 4.789012 ACACTTTTGCAATCCCACTATG 57.211 40.909 0.00 0.00 0.00 2.23
47 48 4.151883 ACACTTTTGCAATCCCACTATGT 58.848 39.130 0.00 0.00 0.00 2.29
48 49 4.588528 ACACTTTTGCAATCCCACTATGTT 59.411 37.500 0.00 0.00 0.00 2.71
49 50 4.925054 CACTTTTGCAATCCCACTATGTTG 59.075 41.667 0.00 0.00 0.00 3.33
50 51 4.832266 ACTTTTGCAATCCCACTATGTTGA 59.168 37.500 0.00 0.00 0.00 3.18
51 52 5.047802 ACTTTTGCAATCCCACTATGTTGAG 60.048 40.000 0.00 0.00 0.00 3.02
52 53 3.998913 TGCAATCCCACTATGTTGAGA 57.001 42.857 0.00 0.00 0.00 3.27
53 54 4.299586 TGCAATCCCACTATGTTGAGAA 57.700 40.909 0.00 0.00 0.00 2.87
54 55 4.264253 TGCAATCCCACTATGTTGAGAAG 58.736 43.478 0.00 0.00 0.00 2.85
55 56 4.019411 TGCAATCCCACTATGTTGAGAAGA 60.019 41.667 0.00 0.00 0.00 2.87
56 57 5.128919 GCAATCCCACTATGTTGAGAAGAT 58.871 41.667 0.00 0.00 0.00 2.40
57 58 5.591877 GCAATCCCACTATGTTGAGAAGATT 59.408 40.000 0.00 0.00 0.00 2.40
58 59 6.096001 GCAATCCCACTATGTTGAGAAGATTT 59.904 38.462 0.00 0.00 0.00 2.17
59 60 7.363268 GCAATCCCACTATGTTGAGAAGATTTT 60.363 37.037 0.00 0.00 0.00 1.82
60 61 9.177608 CAATCCCACTATGTTGAGAAGATTTTA 57.822 33.333 0.00 0.00 0.00 1.52
61 62 9.753674 AATCCCACTATGTTGAGAAGATTTTAA 57.246 29.630 0.00 0.00 0.00 1.52
62 63 9.753674 ATCCCACTATGTTGAGAAGATTTTAAA 57.246 29.630 0.00 0.00 0.00 1.52
63 64 9.010029 TCCCACTATGTTGAGAAGATTTTAAAC 57.990 33.333 0.00 0.00 0.00 2.01
64 65 8.244113 CCCACTATGTTGAGAAGATTTTAAACC 58.756 37.037 0.00 0.00 0.00 3.27
65 66 7.962918 CCACTATGTTGAGAAGATTTTAAACCG 59.037 37.037 0.00 0.00 0.00 4.44
66 67 8.504005 CACTATGTTGAGAAGATTTTAAACCGT 58.496 33.333 0.00 0.00 0.00 4.83
67 68 9.063615 ACTATGTTGAGAAGATTTTAAACCGTT 57.936 29.630 0.00 0.00 0.00 4.44
68 69 9.893305 CTATGTTGAGAAGATTTTAAACCGTTT 57.107 29.630 1.40 1.40 0.00 3.60
70 71 8.401046 TGTTGAGAAGATTTTAAACCGTTTTG 57.599 30.769 0.96 0.00 0.00 2.44
71 72 7.489757 TGTTGAGAAGATTTTAAACCGTTTTGG 59.510 33.333 0.96 0.00 46.41 3.28
72 73 7.336161 TGAGAAGATTTTAAACCGTTTTGGA 57.664 32.000 0.96 0.00 42.00 3.53
73 74 7.947282 TGAGAAGATTTTAAACCGTTTTGGAT 58.053 30.769 0.96 0.00 42.00 3.41
74 75 9.069082 TGAGAAGATTTTAAACCGTTTTGGATA 57.931 29.630 0.96 0.00 42.00 2.59
82 83 9.819267 TTTTAAACCGTTTTGGATATTTGAACT 57.181 25.926 0.96 0.00 42.00 3.01
83 84 8.804688 TTAAACCGTTTTGGATATTTGAACTG 57.195 30.769 0.96 0.00 42.00 3.16
84 85 4.805219 ACCGTTTTGGATATTTGAACTGC 58.195 39.130 0.00 0.00 42.00 4.40
85 86 4.279671 ACCGTTTTGGATATTTGAACTGCA 59.720 37.500 0.00 0.00 42.00 4.41
86 87 5.221342 ACCGTTTTGGATATTTGAACTGCAA 60.221 36.000 0.00 0.00 42.00 4.08
87 88 5.694006 CCGTTTTGGATATTTGAACTGCAAA 59.306 36.000 0.00 0.00 45.33 3.68
88 89 6.346518 CCGTTTTGGATATTTGAACTGCAAAC 60.347 38.462 0.00 0.00 44.57 2.93
89 90 9.148392 CCGTTTTGGATATTTGAACTGCAAACC 62.148 40.741 0.00 0.00 44.57 3.27
95 96 2.869233 TTGAACTGCAAACCTTCTGC 57.131 45.000 0.00 0.00 40.35 4.26
101 102 0.459489 TGCAAACCTTCTGCAACACC 59.541 50.000 0.00 0.00 46.47 4.16
102 103 0.459489 GCAAACCTTCTGCAACACCA 59.541 50.000 0.00 0.00 39.69 4.17
103 104 1.069049 GCAAACCTTCTGCAACACCAT 59.931 47.619 0.00 0.00 39.69 3.55
104 105 2.295909 GCAAACCTTCTGCAACACCATA 59.704 45.455 0.00 0.00 39.69 2.74
105 106 3.056607 GCAAACCTTCTGCAACACCATAT 60.057 43.478 0.00 0.00 39.69 1.78
106 107 4.487948 CAAACCTTCTGCAACACCATATG 58.512 43.478 0.00 0.00 0.00 1.78
107 108 3.719268 ACCTTCTGCAACACCATATGA 57.281 42.857 3.65 0.00 0.00 2.15
108 109 4.240881 ACCTTCTGCAACACCATATGAT 57.759 40.909 3.65 0.00 0.00 2.45
109 110 4.202441 ACCTTCTGCAACACCATATGATC 58.798 43.478 3.65 0.00 0.00 2.92
110 111 3.567164 CCTTCTGCAACACCATATGATCC 59.433 47.826 3.65 0.00 0.00 3.36
111 112 2.837498 TCTGCAACACCATATGATCCG 58.163 47.619 3.65 0.00 0.00 4.18
112 113 2.170397 TCTGCAACACCATATGATCCGT 59.830 45.455 3.65 0.00 0.00 4.69
113 114 2.945008 CTGCAACACCATATGATCCGTT 59.055 45.455 3.65 0.00 0.00 4.44
114 115 3.351740 TGCAACACCATATGATCCGTTT 58.648 40.909 3.65 0.00 0.00 3.60
115 116 3.761218 TGCAACACCATATGATCCGTTTT 59.239 39.130 3.65 0.00 0.00 2.43
116 117 4.104776 GCAACACCATATGATCCGTTTTG 58.895 43.478 3.65 4.56 0.00 2.44
117 118 4.671377 CAACACCATATGATCCGTTTTGG 58.329 43.478 3.65 0.00 40.09 3.28
125 126 2.114411 TCCGTTTTGGAGGTGCCC 59.886 61.111 0.00 0.00 43.74 5.36
126 127 2.989253 CCGTTTTGGAGGTGCCCC 60.989 66.667 0.00 0.00 42.00 5.80
127 128 2.115266 CGTTTTGGAGGTGCCCCT 59.885 61.111 0.00 0.00 46.66 4.79
128 129 1.377229 CGTTTTGGAGGTGCCCCTA 59.623 57.895 0.00 0.00 42.86 3.53
129 130 0.676782 CGTTTTGGAGGTGCCCCTAG 60.677 60.000 0.00 0.00 42.86 3.02
130 131 0.965866 GTTTTGGAGGTGCCCCTAGC 60.966 60.000 0.00 0.00 42.86 3.42
139 140 3.537874 GCCCCTAGCATCGTCGGT 61.538 66.667 0.00 0.00 42.97 4.69
140 141 2.417516 CCCCTAGCATCGTCGGTG 59.582 66.667 0.00 0.00 0.00 4.94
141 142 2.417516 CCCTAGCATCGTCGGTGG 59.582 66.667 7.76 0.00 0.00 4.61
142 143 2.417516 CCTAGCATCGTCGGTGGG 59.582 66.667 7.76 0.00 0.00 4.61
143 144 2.279517 CTAGCATCGTCGGTGGGC 60.280 66.667 7.76 0.00 0.00 5.36
144 145 4.201679 TAGCATCGTCGGTGGGCG 62.202 66.667 7.76 0.00 0.00 6.13
147 148 4.735132 CATCGTCGGTGGGCGTGT 62.735 66.667 0.00 0.00 0.00 4.49
148 149 4.735132 ATCGTCGGTGGGCGTGTG 62.735 66.667 0.00 0.00 0.00 3.82
155 156 4.250305 GTGGGCGTGTGGAGGTGT 62.250 66.667 0.00 0.00 0.00 4.16
156 157 4.248842 TGGGCGTGTGGAGGTGTG 62.249 66.667 0.00 0.00 0.00 3.82
157 158 4.250305 GGGCGTGTGGAGGTGTGT 62.250 66.667 0.00 0.00 0.00 3.72
158 159 2.665185 GGCGTGTGGAGGTGTGTC 60.665 66.667 0.00 0.00 0.00 3.67
159 160 2.421739 GCGTGTGGAGGTGTGTCT 59.578 61.111 0.00 0.00 0.00 3.41
160 161 1.664965 GCGTGTGGAGGTGTGTCTC 60.665 63.158 0.00 0.00 0.00 3.36
166 167 3.366629 GAGGTGTGTCTCCTGCGA 58.633 61.111 0.00 0.00 35.20 5.10
167 168 1.666011 GAGGTGTGTCTCCTGCGAA 59.334 57.895 0.00 0.00 35.20 4.70
168 169 0.247736 GAGGTGTGTCTCCTGCGAAT 59.752 55.000 0.00 0.00 35.20 3.34
169 170 0.247736 AGGTGTGTCTCCTGCGAATC 59.752 55.000 0.00 0.00 33.62 2.52
170 171 0.247736 GGTGTGTCTCCTGCGAATCT 59.752 55.000 0.00 0.00 0.00 2.40
171 172 1.338200 GGTGTGTCTCCTGCGAATCTT 60.338 52.381 0.00 0.00 0.00 2.40
172 173 2.417719 GTGTGTCTCCTGCGAATCTTT 58.582 47.619 0.00 0.00 0.00 2.52
173 174 2.413453 GTGTGTCTCCTGCGAATCTTTC 59.587 50.000 0.00 0.00 0.00 2.62
174 175 2.300152 TGTGTCTCCTGCGAATCTTTCT 59.700 45.455 0.00 0.00 0.00 2.52
175 176 3.244215 TGTGTCTCCTGCGAATCTTTCTT 60.244 43.478 0.00 0.00 0.00 2.52
176 177 3.748568 GTGTCTCCTGCGAATCTTTCTTT 59.251 43.478 0.00 0.00 0.00 2.52
177 178 3.748048 TGTCTCCTGCGAATCTTTCTTTG 59.252 43.478 0.00 0.00 0.00 2.77
178 179 3.126000 GTCTCCTGCGAATCTTTCTTTGG 59.874 47.826 0.00 0.00 0.00 3.28
179 180 3.077359 CTCCTGCGAATCTTTCTTTGGT 58.923 45.455 0.00 0.00 0.00 3.67
180 181 2.813754 TCCTGCGAATCTTTCTTTGGTG 59.186 45.455 0.00 0.00 0.00 4.17
181 182 2.095059 CCTGCGAATCTTTCTTTGGTGG 60.095 50.000 0.00 0.00 0.00 4.61
182 183 2.813754 CTGCGAATCTTTCTTTGGTGGA 59.186 45.455 0.00 0.00 0.00 4.02
183 184 3.420893 TGCGAATCTTTCTTTGGTGGAT 58.579 40.909 0.00 0.00 0.00 3.41
184 185 3.826157 TGCGAATCTTTCTTTGGTGGATT 59.174 39.130 0.00 0.00 0.00 3.01
185 186 4.280677 TGCGAATCTTTCTTTGGTGGATTT 59.719 37.500 0.00 0.00 0.00 2.17
186 187 4.622740 GCGAATCTTTCTTTGGTGGATTTG 59.377 41.667 0.00 0.00 33.41 2.32
187 188 4.622740 CGAATCTTTCTTTGGTGGATTTGC 59.377 41.667 0.00 0.00 0.00 3.68
188 189 5.565439 CGAATCTTTCTTTGGTGGATTTGCT 60.565 40.000 0.00 0.00 0.00 3.91
189 190 5.813513 ATCTTTCTTTGGTGGATTTGCTT 57.186 34.783 0.00 0.00 0.00 3.91
190 191 4.947645 TCTTTCTTTGGTGGATTTGCTTG 58.052 39.130 0.00 0.00 0.00 4.01
191 192 3.749665 TTCTTTGGTGGATTTGCTTGG 57.250 42.857 0.00 0.00 0.00 3.61
192 193 2.956132 TCTTTGGTGGATTTGCTTGGA 58.044 42.857 0.00 0.00 0.00 3.53
193 194 3.509442 TCTTTGGTGGATTTGCTTGGAT 58.491 40.909 0.00 0.00 0.00 3.41
194 195 3.511146 TCTTTGGTGGATTTGCTTGGATC 59.489 43.478 0.00 0.00 0.00 3.36
195 196 2.905415 TGGTGGATTTGCTTGGATCT 57.095 45.000 0.00 0.00 0.00 2.75
196 197 2.449464 TGGTGGATTTGCTTGGATCTG 58.551 47.619 0.00 0.00 0.00 2.90
197 198 1.753073 GGTGGATTTGCTTGGATCTGG 59.247 52.381 0.00 0.00 0.00 3.86
198 199 2.450476 GTGGATTTGCTTGGATCTGGT 58.550 47.619 0.00 0.00 0.00 4.00
199 200 2.827921 GTGGATTTGCTTGGATCTGGTT 59.172 45.455 0.00 0.00 0.00 3.67
200 201 2.827322 TGGATTTGCTTGGATCTGGTTG 59.173 45.455 0.00 0.00 0.00 3.77
201 202 2.827921 GGATTTGCTTGGATCTGGTTGT 59.172 45.455 0.00 0.00 0.00 3.32
202 203 3.119352 GGATTTGCTTGGATCTGGTTGTC 60.119 47.826 0.00 0.00 0.00 3.18
203 204 1.522668 TTGCTTGGATCTGGTTGTCG 58.477 50.000 0.00 0.00 0.00 4.35
204 205 0.396435 TGCTTGGATCTGGTTGTCGT 59.604 50.000 0.00 0.00 0.00 4.34
205 206 1.202758 TGCTTGGATCTGGTTGTCGTT 60.203 47.619 0.00 0.00 0.00 3.85
206 207 1.464997 GCTTGGATCTGGTTGTCGTTC 59.535 52.381 0.00 0.00 0.00 3.95
207 208 1.726791 CTTGGATCTGGTTGTCGTTCG 59.273 52.381 0.00 0.00 0.00 3.95
208 209 0.677288 TGGATCTGGTTGTCGTTCGT 59.323 50.000 0.00 0.00 0.00 3.85
209 210 1.069513 TGGATCTGGTTGTCGTTCGTT 59.930 47.619 0.00 0.00 0.00 3.85
210 211 2.140717 GGATCTGGTTGTCGTTCGTTT 58.859 47.619 0.00 0.00 0.00 3.60
211 212 2.546789 GGATCTGGTTGTCGTTCGTTTT 59.453 45.455 0.00 0.00 0.00 2.43
212 213 3.363673 GGATCTGGTTGTCGTTCGTTTTC 60.364 47.826 0.00 0.00 0.00 2.29
213 214 1.589320 TCTGGTTGTCGTTCGTTTTCG 59.411 47.619 0.00 0.00 45.64 3.46
214 215 1.325338 CTGGTTGTCGTTCGTTTTCGT 59.675 47.619 0.00 0.00 44.46 3.85
215 216 1.731160 TGGTTGTCGTTCGTTTTCGTT 59.269 42.857 0.00 0.00 44.46 3.85
216 217 2.095875 GGTTGTCGTTCGTTTTCGTTG 58.904 47.619 0.00 0.00 44.46 4.10
217 218 2.474361 GGTTGTCGTTCGTTTTCGTTGT 60.474 45.455 0.00 0.00 44.46 3.32
218 219 2.422773 TGTCGTTCGTTTTCGTTGTG 57.577 45.000 0.00 0.00 44.46 3.33
219 220 1.725706 TGTCGTTCGTTTTCGTTGTGT 59.274 42.857 0.00 0.00 44.46 3.72
220 221 2.088449 GTCGTTCGTTTTCGTTGTGTG 58.912 47.619 0.00 0.00 44.46 3.82
221 222 1.725706 TCGTTCGTTTTCGTTGTGTGT 59.274 42.857 0.00 0.00 44.46 3.72
222 223 2.088449 CGTTCGTTTTCGTTGTGTGTC 58.912 47.619 0.00 0.00 44.46 3.67
223 224 2.222640 CGTTCGTTTTCGTTGTGTGTCT 60.223 45.455 0.00 0.00 44.46 3.41
224 225 3.722665 CGTTCGTTTTCGTTGTGTGTCTT 60.723 43.478 0.00 0.00 44.46 3.01
225 226 3.644805 TCGTTTTCGTTGTGTGTCTTC 57.355 42.857 0.00 0.00 44.46 2.87
226 227 2.994578 TCGTTTTCGTTGTGTGTCTTCA 59.005 40.909 0.00 0.00 44.46 3.02
227 228 3.432592 TCGTTTTCGTTGTGTGTCTTCAA 59.567 39.130 0.00 0.00 44.46 2.69
228 229 3.536837 CGTTTTCGTTGTGTGTCTTCAAC 59.463 43.478 0.00 0.00 40.02 3.18
229 230 4.668177 CGTTTTCGTTGTGTGTCTTCAACT 60.668 41.667 0.00 0.00 40.88 3.16
230 231 5.151389 GTTTTCGTTGTGTGTCTTCAACTT 58.849 37.500 0.00 0.00 40.88 2.66
231 232 6.308675 GTTTTCGTTGTGTGTCTTCAACTTA 58.691 36.000 0.00 0.00 40.88 2.24
232 233 5.712217 TTCGTTGTGTGTCTTCAACTTAG 57.288 39.130 0.00 0.00 40.88 2.18
233 234 5.001237 TCGTTGTGTGTCTTCAACTTAGA 57.999 39.130 0.00 0.00 40.88 2.10
234 235 5.597806 TCGTTGTGTGTCTTCAACTTAGAT 58.402 37.500 0.00 0.00 40.88 1.98
235 236 5.690409 TCGTTGTGTGTCTTCAACTTAGATC 59.310 40.000 0.00 0.00 40.88 2.75
236 237 5.107453 CGTTGTGTGTCTTCAACTTAGATCC 60.107 44.000 0.00 0.00 40.88 3.36
237 238 5.808366 TGTGTGTCTTCAACTTAGATCCT 57.192 39.130 0.00 0.00 0.00 3.24
238 239 6.174720 TGTGTGTCTTCAACTTAGATCCTT 57.825 37.500 0.00 0.00 0.00 3.36
239 240 6.591935 TGTGTGTCTTCAACTTAGATCCTTT 58.408 36.000 0.00 0.00 0.00 3.11
240 241 6.706270 TGTGTGTCTTCAACTTAGATCCTTTC 59.294 38.462 0.00 0.00 0.00 2.62
241 242 5.926542 TGTGTCTTCAACTTAGATCCTTTCG 59.073 40.000 0.00 0.00 0.00 3.46
242 243 6.157211 GTGTCTTCAACTTAGATCCTTTCGA 58.843 40.000 0.00 0.00 0.00 3.71
243 244 6.814146 GTGTCTTCAACTTAGATCCTTTCGAT 59.186 38.462 0.00 0.00 0.00 3.59
244 245 7.974501 GTGTCTTCAACTTAGATCCTTTCGATA 59.025 37.037 0.00 0.00 0.00 2.92
245 246 8.696374 TGTCTTCAACTTAGATCCTTTCGATAT 58.304 33.333 0.00 0.00 0.00 1.63
249 250 8.988064 TCAACTTAGATCCTTTCGATATATGC 57.012 34.615 0.00 0.00 0.00 3.14
250 251 8.807118 TCAACTTAGATCCTTTCGATATATGCT 58.193 33.333 0.00 0.00 0.00 3.79
253 254 9.469097 ACTTAGATCCTTTCGATATATGCTACT 57.531 33.333 0.00 0.00 0.00 2.57
254 255 9.944663 CTTAGATCCTTTCGATATATGCTACTC 57.055 37.037 0.00 0.00 0.00 2.59
255 256 9.688091 TTAGATCCTTTCGATATATGCTACTCT 57.312 33.333 0.00 0.00 0.00 3.24
256 257 8.588290 AGATCCTTTCGATATATGCTACTCTT 57.412 34.615 0.00 0.00 0.00 2.85
257 258 8.682710 AGATCCTTTCGATATATGCTACTCTTC 58.317 37.037 0.00 0.00 0.00 2.87
258 259 7.761038 TCCTTTCGATATATGCTACTCTTCA 57.239 36.000 0.00 0.00 0.00 3.02
259 260 8.354711 TCCTTTCGATATATGCTACTCTTCAT 57.645 34.615 0.00 0.00 0.00 2.57
260 261 9.462606 TCCTTTCGATATATGCTACTCTTCATA 57.537 33.333 0.00 0.00 0.00 2.15
265 266 8.624776 TCGATATATGCTACTCTTCATATGTGG 58.375 37.037 1.90 0.00 36.76 4.17
266 267 8.409371 CGATATATGCTACTCTTCATATGTGGT 58.591 37.037 1.90 1.02 36.76 4.16
267 268 9.526713 GATATATGCTACTCTTCATATGTGGTG 57.473 37.037 1.90 1.20 36.76 4.17
268 269 5.876651 ATGCTACTCTTCATATGTGGTGA 57.123 39.130 1.90 0.00 0.00 4.02
269 270 5.876651 TGCTACTCTTCATATGTGGTGAT 57.123 39.130 1.90 0.00 0.00 3.06
270 271 6.239217 TGCTACTCTTCATATGTGGTGATT 57.761 37.500 1.90 0.00 0.00 2.57
271 272 6.051074 TGCTACTCTTCATATGTGGTGATTG 58.949 40.000 1.90 0.00 0.00 2.67
272 273 5.049818 GCTACTCTTCATATGTGGTGATTGC 60.050 44.000 1.90 0.00 0.00 3.56
273 274 5.108187 ACTCTTCATATGTGGTGATTGCT 57.892 39.130 1.90 0.00 0.00 3.91
274 275 4.880120 ACTCTTCATATGTGGTGATTGCTG 59.120 41.667 1.90 0.00 0.00 4.41
275 276 4.847198 TCTTCATATGTGGTGATTGCTGT 58.153 39.130 1.90 0.00 0.00 4.40
276 277 5.255687 TCTTCATATGTGGTGATTGCTGTT 58.744 37.500 1.90 0.00 0.00 3.16
277 278 5.355071 TCTTCATATGTGGTGATTGCTGTTC 59.645 40.000 1.90 0.00 0.00 3.18
278 279 4.847198 TCATATGTGGTGATTGCTGTTCT 58.153 39.130 1.90 0.00 0.00 3.01
279 280 5.988287 TCATATGTGGTGATTGCTGTTCTA 58.012 37.500 1.90 0.00 0.00 2.10
280 281 6.051074 TCATATGTGGTGATTGCTGTTCTAG 58.949 40.000 1.90 0.00 0.00 2.43
281 282 3.769739 TGTGGTGATTGCTGTTCTAGT 57.230 42.857 0.00 0.00 0.00 2.57
282 283 3.402110 TGTGGTGATTGCTGTTCTAGTG 58.598 45.455 0.00 0.00 0.00 2.74
283 284 2.160417 GTGGTGATTGCTGTTCTAGTGC 59.840 50.000 0.00 0.00 0.00 4.40
284 285 1.394917 GGTGATTGCTGTTCTAGTGCG 59.605 52.381 0.00 0.00 0.00 5.34
285 286 2.069273 GTGATTGCTGTTCTAGTGCGT 58.931 47.619 0.00 0.00 0.00 5.24
286 287 2.092838 GTGATTGCTGTTCTAGTGCGTC 59.907 50.000 0.00 0.00 0.00 5.19
287 288 1.321743 GATTGCTGTTCTAGTGCGTCG 59.678 52.381 0.00 0.00 0.00 5.12
288 289 0.666274 TTGCTGTTCTAGTGCGTCGG 60.666 55.000 0.00 0.00 0.00 4.79
289 290 1.080705 GCTGTTCTAGTGCGTCGGT 60.081 57.895 0.00 0.00 0.00 4.69
290 291 0.666577 GCTGTTCTAGTGCGTCGGTT 60.667 55.000 0.00 0.00 0.00 4.44
291 292 1.779569 CTGTTCTAGTGCGTCGGTTT 58.220 50.000 0.00 0.00 0.00 3.27
292 293 2.132762 CTGTTCTAGTGCGTCGGTTTT 58.867 47.619 0.00 0.00 0.00 2.43
293 294 3.311106 CTGTTCTAGTGCGTCGGTTTTA 58.689 45.455 0.00 0.00 0.00 1.52
294 295 3.916761 TGTTCTAGTGCGTCGGTTTTAT 58.083 40.909 0.00 0.00 0.00 1.40
295 296 3.676172 TGTTCTAGTGCGTCGGTTTTATG 59.324 43.478 0.00 0.00 0.00 1.90
296 297 2.883574 TCTAGTGCGTCGGTTTTATGG 58.116 47.619 0.00 0.00 0.00 2.74
297 298 1.931172 CTAGTGCGTCGGTTTTATGGG 59.069 52.381 0.00 0.00 0.00 4.00
298 299 0.675522 AGTGCGTCGGTTTTATGGGG 60.676 55.000 0.00 0.00 0.00 4.96
299 300 2.041686 TGCGTCGGTTTTATGGGGC 61.042 57.895 0.00 0.00 0.00 5.80
300 301 2.767445 GCGTCGGTTTTATGGGGCC 61.767 63.158 0.00 0.00 0.00 5.80
301 302 1.078001 CGTCGGTTTTATGGGGCCT 60.078 57.895 0.84 0.00 0.00 5.19
302 303 0.678684 CGTCGGTTTTATGGGGCCTT 60.679 55.000 0.84 0.00 0.00 4.35
303 304 1.407162 CGTCGGTTTTATGGGGCCTTA 60.407 52.381 0.84 0.00 0.00 2.69
304 305 2.294979 GTCGGTTTTATGGGGCCTTAG 58.705 52.381 0.84 0.00 0.00 2.18
305 306 1.029681 CGGTTTTATGGGGCCTTAGC 58.970 55.000 0.84 0.00 38.76 3.09
306 307 1.683629 CGGTTTTATGGGGCCTTAGCA 60.684 52.381 0.84 0.00 42.56 3.49
307 308 2.677914 GGTTTTATGGGGCCTTAGCAT 58.322 47.619 0.84 0.14 42.56 3.79
308 309 2.365293 GGTTTTATGGGGCCTTAGCATG 59.635 50.000 0.84 0.00 42.56 4.06
309 310 3.295973 GTTTTATGGGGCCTTAGCATGA 58.704 45.455 0.84 0.00 42.56 3.07
310 311 2.656947 TTATGGGGCCTTAGCATGAC 57.343 50.000 0.84 0.00 42.56 3.06
311 312 0.396435 TATGGGGCCTTAGCATGACG 59.604 55.000 0.84 0.00 42.56 4.35
312 313 1.344953 ATGGGGCCTTAGCATGACGA 61.345 55.000 0.84 0.00 42.56 4.20
313 314 1.523938 GGGGCCTTAGCATGACGAC 60.524 63.158 0.84 0.00 42.56 4.34
314 315 1.522569 GGGCCTTAGCATGACGACT 59.477 57.895 0.84 0.00 42.56 4.18
315 316 0.107654 GGGCCTTAGCATGACGACTT 60.108 55.000 0.84 0.00 42.56 3.01
316 317 1.291132 GGCCTTAGCATGACGACTTC 58.709 55.000 0.00 0.00 42.56 3.01
317 318 1.134670 GGCCTTAGCATGACGACTTCT 60.135 52.381 0.00 0.00 42.56 2.85
318 319 2.622436 GCCTTAGCATGACGACTTCTT 58.378 47.619 0.00 0.00 39.53 2.52
319 320 2.349886 GCCTTAGCATGACGACTTCTTG 59.650 50.000 0.00 0.00 39.53 3.02
320 321 3.849911 CCTTAGCATGACGACTTCTTGA 58.150 45.455 0.00 0.00 32.19 3.02
321 322 3.614616 CCTTAGCATGACGACTTCTTGAC 59.385 47.826 0.00 0.00 32.19 3.18
322 323 4.489810 CTTAGCATGACGACTTCTTGACT 58.510 43.478 0.00 0.12 32.19 3.41
323 324 2.681706 AGCATGACGACTTCTTGACTG 58.318 47.619 0.00 0.00 32.19 3.51
324 325 2.036475 AGCATGACGACTTCTTGACTGT 59.964 45.455 0.00 0.00 32.19 3.55
325 326 2.410053 GCATGACGACTTCTTGACTGTC 59.590 50.000 0.00 0.00 32.19 3.51
326 327 3.858877 GCATGACGACTTCTTGACTGTCT 60.859 47.826 9.51 0.00 32.19 3.41
327 328 4.616143 GCATGACGACTTCTTGACTGTCTA 60.616 45.833 9.51 0.09 32.19 2.59
328 329 5.645624 CATGACGACTTCTTGACTGTCTAT 58.354 41.667 9.51 0.00 32.19 1.98
329 330 5.707242 TGACGACTTCTTGACTGTCTATT 57.293 39.130 9.51 0.00 0.00 1.73
330 331 6.812879 TGACGACTTCTTGACTGTCTATTA 57.187 37.500 9.51 0.00 0.00 0.98
331 332 6.609533 TGACGACTTCTTGACTGTCTATTAC 58.390 40.000 9.51 0.00 0.00 1.89
332 333 6.206048 TGACGACTTCTTGACTGTCTATTACA 59.794 38.462 9.51 0.00 36.42 2.41
333 334 6.978338 ACGACTTCTTGACTGTCTATTACAA 58.022 36.000 9.51 0.00 37.74 2.41
334 335 6.862090 ACGACTTCTTGACTGTCTATTACAAC 59.138 38.462 9.51 0.00 37.74 3.32
335 336 6.861572 CGACTTCTTGACTGTCTATTACAACA 59.138 38.462 9.51 0.00 37.74 3.33
336 337 7.381408 CGACTTCTTGACTGTCTATTACAACAA 59.619 37.037 9.51 0.00 37.74 2.83
337 338 8.594881 ACTTCTTGACTGTCTATTACAACAAG 57.405 34.615 9.51 13.60 44.72 3.16
338 339 8.204836 ACTTCTTGACTGTCTATTACAACAAGT 58.795 33.333 9.51 1.68 44.28 3.16
339 340 8.958119 TTCTTGACTGTCTATTACAACAAGTT 57.042 30.769 9.51 0.00 44.28 2.66
340 341 8.958119 TCTTGACTGTCTATTACAACAAGTTT 57.042 30.769 9.51 0.00 44.28 2.66
341 342 9.391006 TCTTGACTGTCTATTACAACAAGTTTT 57.609 29.630 9.51 0.00 44.28 2.43
342 343 9.438291 CTTGACTGTCTATTACAACAAGTTTTG 57.562 33.333 9.51 0.00 41.93 2.44
344 345 8.609176 TGACTGTCTATTACAACAAGTTTTGTC 58.391 33.333 9.51 0.00 44.59 3.18
345 346 7.927048 ACTGTCTATTACAACAAGTTTTGTCC 58.073 34.615 6.68 0.00 44.59 4.02
346 347 7.773690 ACTGTCTATTACAACAAGTTTTGTCCT 59.226 33.333 6.68 1.23 44.59 3.85
347 348 7.925993 TGTCTATTACAACAAGTTTTGTCCTG 58.074 34.615 6.68 0.00 44.59 3.86
348 349 7.554835 TGTCTATTACAACAAGTTTTGTCCTGT 59.445 33.333 6.68 5.08 44.59 4.00
349 350 8.403236 GTCTATTACAACAAGTTTTGTCCTGTT 58.597 33.333 5.03 0.00 44.59 3.16
350 351 9.616156 TCTATTACAACAAGTTTTGTCCTGTTA 57.384 29.630 5.03 0.00 44.59 2.41
351 352 9.659830 CTATTACAACAAGTTTTGTCCTGTTAC 57.340 33.333 5.03 0.00 44.59 2.50
352 353 4.976987 ACAACAAGTTTTGTCCTGTTACG 58.023 39.130 0.00 0.00 44.59 3.18
353 354 4.696402 ACAACAAGTTTTGTCCTGTTACGA 59.304 37.500 0.00 0.00 44.59 3.43
354 355 5.355910 ACAACAAGTTTTGTCCTGTTACGAT 59.644 36.000 0.00 0.00 44.59 3.73
355 356 6.539464 ACAACAAGTTTTGTCCTGTTACGATA 59.461 34.615 0.00 0.00 44.59 2.92
356 357 7.066043 ACAACAAGTTTTGTCCTGTTACGATAA 59.934 33.333 0.00 0.00 44.59 1.75
357 358 6.951643 ACAAGTTTTGTCCTGTTACGATAAC 58.048 36.000 0.00 0.00 40.56 1.89
358 359 5.834239 AGTTTTGTCCTGTTACGATAACG 57.166 39.130 0.00 0.00 45.75 3.18
359 360 4.687483 AGTTTTGTCCTGTTACGATAACGG 59.313 41.667 0.00 0.00 44.46 4.44
360 361 2.282701 TGTCCTGTTACGATAACGGC 57.717 50.000 0.00 7.79 44.46 5.68
361 362 1.194495 GTCCTGTTACGATAACGGCG 58.806 55.000 4.80 4.80 44.46 6.46
362 363 1.093972 TCCTGTTACGATAACGGCGA 58.906 50.000 16.62 0.00 44.46 5.54
363 364 1.194495 CCTGTTACGATAACGGCGAC 58.806 55.000 16.62 0.00 44.46 5.19
364 365 1.467883 CCTGTTACGATAACGGCGACA 60.468 52.381 16.62 3.40 44.46 4.35
365 366 1.580704 CTGTTACGATAACGGCGACAC 59.419 52.381 16.62 0.69 44.46 3.67
366 367 0.562950 GTTACGATAACGGCGACACG 59.437 55.000 16.62 15.63 44.46 4.49
383 384 3.191539 GCCTTCGGCTCGCTTCAG 61.192 66.667 0.00 0.00 46.69 3.02
384 385 2.262915 CCTTCGGCTCGCTTCAGT 59.737 61.111 0.00 0.00 0.00 3.41
385 386 2.097038 CCTTCGGCTCGCTTCAGTG 61.097 63.158 0.00 0.00 0.00 3.66
386 387 2.734673 CTTCGGCTCGCTTCAGTGC 61.735 63.158 0.00 0.00 0.00 4.40
387 388 3.226429 TTCGGCTCGCTTCAGTGCT 62.226 57.895 0.00 0.00 0.00 4.40
388 389 2.715532 TTCGGCTCGCTTCAGTGCTT 62.716 55.000 0.00 0.00 0.00 3.91
389 390 1.446099 CGGCTCGCTTCAGTGCTTA 60.446 57.895 0.00 0.00 0.00 3.09
390 391 0.807667 CGGCTCGCTTCAGTGCTTAT 60.808 55.000 0.00 0.00 0.00 1.73
391 392 1.536072 CGGCTCGCTTCAGTGCTTATA 60.536 52.381 0.00 0.00 0.00 0.98
392 393 2.131183 GGCTCGCTTCAGTGCTTATAG 58.869 52.381 0.00 0.00 0.00 1.31
393 394 2.482142 GGCTCGCTTCAGTGCTTATAGT 60.482 50.000 0.00 0.00 0.00 2.12
394 395 3.190874 GCTCGCTTCAGTGCTTATAGTT 58.809 45.455 0.00 0.00 0.00 2.24
395 396 3.000724 GCTCGCTTCAGTGCTTATAGTTG 59.999 47.826 0.00 0.00 0.00 3.16
396 397 4.177026 CTCGCTTCAGTGCTTATAGTTGT 58.823 43.478 0.00 0.00 0.00 3.32
397 398 4.174009 TCGCTTCAGTGCTTATAGTTGTC 58.826 43.478 0.00 0.00 0.00 3.18
398 399 3.000674 CGCTTCAGTGCTTATAGTTGTCG 60.001 47.826 0.00 0.00 0.00 4.35
399 400 3.927142 GCTTCAGTGCTTATAGTTGTCGT 59.073 43.478 0.00 0.00 0.00 4.34
400 401 4.389077 GCTTCAGTGCTTATAGTTGTCGTT 59.611 41.667 0.00 0.00 0.00 3.85
401 402 5.575606 GCTTCAGTGCTTATAGTTGTCGTTA 59.424 40.000 0.00 0.00 0.00 3.18
402 403 6.237595 GCTTCAGTGCTTATAGTTGTCGTTAG 60.238 42.308 0.00 0.00 0.00 2.34
403 404 5.647589 TCAGTGCTTATAGTTGTCGTTAGG 58.352 41.667 0.00 0.00 0.00 2.69
404 405 5.184479 TCAGTGCTTATAGTTGTCGTTAGGT 59.816 40.000 0.00 0.00 0.00 3.08
405 406 6.375174 TCAGTGCTTATAGTTGTCGTTAGGTA 59.625 38.462 0.00 0.00 0.00 3.08
406 407 7.067859 TCAGTGCTTATAGTTGTCGTTAGGTAT 59.932 37.037 0.00 0.00 0.00 2.73
407 408 7.705325 CAGTGCTTATAGTTGTCGTTAGGTATT 59.295 37.037 0.00 0.00 0.00 1.89
408 409 7.919621 AGTGCTTATAGTTGTCGTTAGGTATTC 59.080 37.037 0.00 0.00 0.00 1.75
409 410 7.919621 GTGCTTATAGTTGTCGTTAGGTATTCT 59.080 37.037 0.00 0.00 0.00 2.40
410 411 9.123902 TGCTTATAGTTGTCGTTAGGTATTCTA 57.876 33.333 0.00 0.00 0.00 2.10
411 412 9.392021 GCTTATAGTTGTCGTTAGGTATTCTAC 57.608 37.037 0.00 0.00 0.00 2.59
412 413 9.591404 CTTATAGTTGTCGTTAGGTATTCTACG 57.409 37.037 0.00 0.00 0.00 3.51
413 414 5.240713 AGTTGTCGTTAGGTATTCTACGG 57.759 43.478 0.00 0.00 0.00 4.02
414 415 4.943705 AGTTGTCGTTAGGTATTCTACGGA 59.056 41.667 0.00 0.00 0.00 4.69
415 416 5.591877 AGTTGTCGTTAGGTATTCTACGGAT 59.408 40.000 0.00 0.00 0.00 4.18
416 417 6.096001 AGTTGTCGTTAGGTATTCTACGGATT 59.904 38.462 0.00 0.00 0.00 3.01
417 418 6.455360 TGTCGTTAGGTATTCTACGGATTT 57.545 37.500 0.00 0.00 0.00 2.17
418 419 6.267817 TGTCGTTAGGTATTCTACGGATTTG 58.732 40.000 0.00 0.00 0.00 2.32
419 420 6.127647 TGTCGTTAGGTATTCTACGGATTTGT 60.128 38.462 0.00 0.00 0.00 2.83
420 421 7.066887 TGTCGTTAGGTATTCTACGGATTTGTA 59.933 37.037 0.00 0.00 0.00 2.41
421 422 8.078596 GTCGTTAGGTATTCTACGGATTTGTAT 58.921 37.037 0.00 0.00 0.00 2.29
422 423 8.077991 TCGTTAGGTATTCTACGGATTTGTATG 58.922 37.037 0.00 0.00 0.00 2.39
423 424 7.864379 CGTTAGGTATTCTACGGATTTGTATGT 59.136 37.037 0.00 0.00 0.00 2.29
453 454 8.541133 TTTTGATGTTCGTTATACTGTCATGA 57.459 30.769 0.00 0.00 0.00 3.07
454 455 8.716646 TTTGATGTTCGTTATACTGTCATGAT 57.283 30.769 0.00 0.00 0.00 2.45
455 456 7.930513 TGATGTTCGTTATACTGTCATGATC 57.069 36.000 0.00 0.00 0.00 2.92
456 457 6.636850 TGATGTTCGTTATACTGTCATGATCG 59.363 38.462 0.00 0.00 0.00 3.69
457 458 5.278604 TGTTCGTTATACTGTCATGATCGG 58.721 41.667 0.00 0.51 0.00 4.18
458 459 5.066764 TGTTCGTTATACTGTCATGATCGGA 59.933 40.000 0.00 0.00 0.00 4.55
459 460 5.358298 TCGTTATACTGTCATGATCGGAG 57.642 43.478 0.00 0.00 0.00 4.63
460 461 5.061179 TCGTTATACTGTCATGATCGGAGA 58.939 41.667 0.00 0.00 45.75 3.71
461 462 5.049612 TCGTTATACTGTCATGATCGGAGAC 60.050 44.000 0.00 5.37 42.51 3.36
476 477 2.822764 GGAGACGCATAAATCGGAAGT 58.177 47.619 0.00 0.00 0.00 3.01
477 478 3.195661 GGAGACGCATAAATCGGAAGTT 58.804 45.455 0.00 0.00 0.00 2.66
478 479 3.621715 GGAGACGCATAAATCGGAAGTTT 59.378 43.478 0.00 0.00 0.00 2.66
479 480 4.094442 GGAGACGCATAAATCGGAAGTTTT 59.906 41.667 0.00 0.00 36.93 2.43
480 481 5.391629 GGAGACGCATAAATCGGAAGTTTTT 60.392 40.000 0.00 0.00 34.97 1.94
514 515 2.125912 GATCGGGCGATCGGATGG 60.126 66.667 18.30 0.00 41.09 3.51
515 516 4.379243 ATCGGGCGATCGGATGGC 62.379 66.667 18.30 15.61 34.66 4.40
530 531 2.895372 GGCACACCGGCCGAATAG 60.895 66.667 30.73 12.89 45.40 1.73
544 545 2.352388 CGAATAGGAGCCGTTTCCAAA 58.648 47.619 5.37 0.00 39.84 3.28
558 559 4.114073 GTTTCCAAACCGAAAACGGATTT 58.886 39.130 15.45 8.94 33.68 2.17
561 562 3.047093 CCAAACCGAAAACGGATTTGAC 58.953 45.455 23.49 0.00 33.08 3.18
605 606 9.793245 GACCACGAAATCAATAATAAATAGACG 57.207 33.333 0.00 0.00 0.00 4.18
648 669 2.363788 TTGCAGTACGCGAGAGAAAT 57.636 45.000 15.93 0.00 46.97 2.17
652 673 2.280183 GCAGTACGCGAGAGAAATTGAG 59.720 50.000 15.93 0.00 0.00 3.02
970 993 2.687200 TGGGCATAGTGGAGGCGT 60.687 61.111 0.00 0.00 34.98 5.68
1239 1266 1.218316 GTGGAAGAGCGGGATCGTT 59.782 57.895 0.00 0.00 38.89 3.85
1281 1308 1.721664 CGCTGGAAGACATGCATGGG 61.722 60.000 29.41 7.08 34.07 4.00
1342 1379 1.926511 GCTTCCAAGATGGGCGTGTG 61.927 60.000 0.00 0.00 38.32 3.82
1404 1441 2.050442 CAAAAGAACGTGGCCGGC 60.050 61.111 21.18 21.18 38.78 6.13
1429 1498 1.102978 TCGTCGAGATGGATCTGCAA 58.897 50.000 0.00 0.00 37.25 4.08
1430 1499 1.683385 TCGTCGAGATGGATCTGCAAT 59.317 47.619 0.00 0.00 37.25 3.56
1431 1500 2.057316 CGTCGAGATGGATCTGCAATC 58.943 52.381 0.00 0.00 37.25 2.67
1432 1501 2.288091 CGTCGAGATGGATCTGCAATCT 60.288 50.000 0.00 0.00 37.25 2.40
1433 1502 3.058450 GTCGAGATGGATCTGCAATCTG 58.942 50.000 2.58 0.00 37.25 2.90
1434 1503 1.799403 CGAGATGGATCTGCAATCTGC 59.201 52.381 2.58 0.00 45.29 4.26
1468 1542 2.165030 GTCGACCGGTTCAGAAGGATTA 59.835 50.000 9.42 0.00 0.00 1.75
1553 1635 9.918630 TCTTTACACTTGTCTGTATTAGTTACC 57.081 33.333 0.00 0.00 0.00 2.85
1558 1640 8.863086 ACACTTGTCTGTATTAGTTACCTTGTA 58.137 33.333 0.00 0.00 0.00 2.41
1563 1645 8.692710 TGTCTGTATTAGTTACCTTGTAGATGG 58.307 37.037 0.00 0.00 0.00 3.51
1565 1647 9.656323 TCTGTATTAGTTACCTTGTAGATGGAT 57.344 33.333 0.00 0.00 0.00 3.41
1566 1648 9.915629 CTGTATTAGTTACCTTGTAGATGGATC 57.084 37.037 0.00 0.00 0.00 3.36
1567 1649 9.656323 TGTATTAGTTACCTTGTAGATGGATCT 57.344 33.333 0.00 0.00 40.86 2.75
1568 1650 9.915629 GTATTAGTTACCTTGTAGATGGATCTG 57.084 37.037 0.00 0.00 37.76 2.90
1569 1651 5.283457 AGTTACCTTGTAGATGGATCTGC 57.717 43.478 0.00 0.00 39.57 4.26
1570 1652 4.716784 AGTTACCTTGTAGATGGATCTGCA 59.283 41.667 3.55 3.55 45.65 4.41
1571 1653 5.367937 AGTTACCTTGTAGATGGATCTGCAT 59.632 40.000 8.07 0.00 46.35 3.96
1617 2010 1.135489 TCTGGACGCGCTTACAGTAAG 60.135 52.381 23.92 15.16 38.80 2.34
1660 2058 1.442184 CTATGCGCGCGTAGGGTAG 60.442 63.158 40.02 24.99 44.71 3.18
1666 2075 0.660595 CGCGCGTAGGGTAGAAGATG 60.661 60.000 24.19 0.00 44.71 2.90
1672 2081 4.680110 CGCGTAGGGTAGAAGATGTAATTG 59.320 45.833 0.00 0.00 34.98 2.32
1784 2229 3.535962 CTCCAGAGCGAGCCCTCC 61.536 72.222 0.00 0.00 32.17 4.30
1830 2276 1.294659 CTGCAACCTGAGAAGCCGAC 61.295 60.000 0.00 0.00 0.00 4.79
1882 2328 2.094649 CCACTTCTCCTCAACGTAGACC 60.095 54.545 0.00 0.00 0.00 3.85
1888 2334 1.509923 CTCAACGTAGACCCGGTCC 59.490 63.158 14.32 0.00 32.18 4.46
1890 2336 1.214589 CAACGTAGACCCGGTCCAG 59.785 63.158 14.32 8.29 32.18 3.86
1907 2353 1.613630 AGGTCGTGGAGGAATGGCT 60.614 57.895 0.00 0.00 0.00 4.75
1908 2354 1.201429 AGGTCGTGGAGGAATGGCTT 61.201 55.000 0.00 0.00 0.00 4.35
1912 2358 1.026718 CGTGGAGGAATGGCTTGTCC 61.027 60.000 0.00 0.00 0.00 4.02
1916 2362 3.508840 GGAATGGCTTGTCCGGCG 61.509 66.667 0.00 0.00 37.80 6.46
1917 2363 2.435938 GAATGGCTTGTCCGGCGA 60.436 61.111 9.30 0.00 37.80 5.54
2008 2454 4.598257 GACTGGTCCATGGACGTG 57.402 61.111 33.24 28.68 45.41 4.49
2009 2455 1.972198 GACTGGTCCATGGACGTGA 59.028 57.895 33.24 20.66 45.41 4.35
2010 2456 0.108615 GACTGGTCCATGGACGTGAG 60.109 60.000 33.24 28.56 45.41 3.51
2011 2457 0.541998 ACTGGTCCATGGACGTGAGA 60.542 55.000 33.24 16.25 45.41 3.27
2012 2458 0.108615 CTGGTCCATGGACGTGAGAC 60.109 60.000 33.24 20.95 45.41 3.36
2013 2459 0.830023 TGGTCCATGGACGTGAGACA 60.830 55.000 33.24 23.06 45.41 3.41
2035 2509 0.458025 CAGGACGGTCGGAGCTTAAC 60.458 60.000 5.58 0.00 0.00 2.01
2043 2517 2.263540 GGAGCTTAACCGTCGCCA 59.736 61.111 0.00 0.00 0.00 5.69
2045 2519 1.429148 GGAGCTTAACCGTCGCCATG 61.429 60.000 0.00 0.00 0.00 3.66
2046 2520 1.429148 GAGCTTAACCGTCGCCATGG 61.429 60.000 7.63 7.63 34.34 3.66
2048 2522 1.449601 CTTAACCGTCGCCATGGCT 60.450 57.895 33.07 16.73 39.32 4.75
2060 2534 0.460987 CCATGGCTGTCGTCTTCTCC 60.461 60.000 0.00 0.00 0.00 3.71
2061 2535 0.803768 CATGGCTGTCGTCTTCTCCG 60.804 60.000 0.00 0.00 0.00 4.63
2062 2536 2.507324 GGCTGTCGTCTTCTCCGC 60.507 66.667 0.00 0.00 0.00 5.54
2063 2537 2.507324 GCTGTCGTCTTCTCCGCC 60.507 66.667 0.00 0.00 0.00 6.13
2066 2540 0.038159 CTGTCGTCTTCTCCGCCTTT 60.038 55.000 0.00 0.00 0.00 3.11
2067 2541 0.319555 TGTCGTCTTCTCCGCCTTTG 60.320 55.000 0.00 0.00 0.00 2.77
2068 2542 1.014564 GTCGTCTTCTCCGCCTTTGG 61.015 60.000 0.00 0.00 0.00 3.28
2069 2543 2.391389 CGTCTTCTCCGCCTTTGGC 61.391 63.158 0.00 0.00 46.75 4.52
2097 2571 4.335584 CTCCGCGCGATCTCCCTC 62.336 72.222 34.63 0.00 0.00 4.30
2106 2648 1.760029 GCGATCTCCCTCTTCTCCTTT 59.240 52.381 0.00 0.00 0.00 3.11
2108 2650 3.369997 GCGATCTCCCTCTTCTCCTTTTT 60.370 47.826 0.00 0.00 0.00 1.94
2120 2662 0.536460 TCCTTTTTGACTCCCACGGC 60.536 55.000 0.00 0.00 0.00 5.68
2132 2677 4.430423 CACGGCTTCGCGTTGCTC 62.430 66.667 20.71 12.54 37.41 4.26
2133 2678 4.961511 ACGGCTTCGCGTTGCTCA 62.962 61.111 20.71 0.00 37.41 4.26
2140 2685 4.374702 CGCGTTGCTCACCTGCAC 62.375 66.667 0.00 0.00 43.20 4.57
2145 2690 2.327343 TTGCTCACCTGCACGCATC 61.327 57.895 0.00 0.00 43.20 3.91
2162 2707 3.245315 CGGCGTCGTCCGTGAATC 61.245 66.667 16.63 0.00 44.18 2.52
2163 2708 2.884207 GGCGTCGTCCGTGAATCC 60.884 66.667 0.00 0.00 39.32 3.01
2164 2709 2.884207 GCGTCGTCCGTGAATCCC 60.884 66.667 0.00 0.00 39.32 3.85
2165 2710 2.882876 CGTCGTCCGTGAATCCCT 59.117 61.111 0.00 0.00 0.00 4.20
2166 2711 1.516386 CGTCGTCCGTGAATCCCTG 60.516 63.158 0.00 0.00 0.00 4.45
2167 2712 1.810030 GTCGTCCGTGAATCCCTGC 60.810 63.158 0.00 0.00 0.00 4.85
2168 2713 1.982395 TCGTCCGTGAATCCCTGCT 60.982 57.895 0.00 0.00 0.00 4.24
2169 2714 1.519455 CGTCCGTGAATCCCTGCTC 60.519 63.158 0.00 0.00 0.00 4.26
2170 2715 1.519455 GTCCGTGAATCCCTGCTCG 60.519 63.158 0.00 0.00 0.00 5.03
2171 2716 2.892425 CCGTGAATCCCTGCTCGC 60.892 66.667 0.00 0.00 0.00 5.03
2172 2717 2.892425 CGTGAATCCCTGCTCGCC 60.892 66.667 0.00 0.00 0.00 5.54
2173 2718 2.514824 GTGAATCCCTGCTCGCCC 60.515 66.667 0.00 0.00 0.00 6.13
2174 2719 2.688666 TGAATCCCTGCTCGCCCT 60.689 61.111 0.00 0.00 0.00 5.19
2175 2720 2.110006 GAATCCCTGCTCGCCCTC 59.890 66.667 0.00 0.00 0.00 4.30
2176 2721 3.798954 GAATCCCTGCTCGCCCTCG 62.799 68.421 0.00 0.00 0.00 4.63
2240 2795 3.047877 AGCTAACGCACGGCAACC 61.048 61.111 0.00 0.00 39.10 3.77
2241 2796 4.097863 GCTAACGCACGGCAACCC 62.098 66.667 0.00 0.00 35.78 4.11
2292 2847 3.599285 TTCGCCTGCACCCTAACCG 62.599 63.158 0.00 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.672266 AGTTCCACTCTCAGTATTTTCTCA 57.328 37.500 0.00 0.00 0.00 3.27
2 3 7.542824 GTGTAGTTCCACTCTCAGTATTTTCTC 59.457 40.741 0.00 0.00 32.50 2.87
3 4 7.233757 AGTGTAGTTCCACTCTCAGTATTTTCT 59.766 37.037 0.00 0.00 41.84 2.52
5 6 7.304497 AGTGTAGTTCCACTCTCAGTATTTT 57.696 36.000 0.00 0.00 41.84 1.82
6 7 6.919775 AGTGTAGTTCCACTCTCAGTATTT 57.080 37.500 0.00 0.00 41.84 1.40
7 8 6.919775 AAGTGTAGTTCCACTCTCAGTATT 57.080 37.500 0.00 0.00 44.74 1.89
8 9 6.919775 AAAGTGTAGTTCCACTCTCAGTAT 57.080 37.500 0.00 0.00 44.74 2.12
9 10 6.513180 CAAAAGTGTAGTTCCACTCTCAGTA 58.487 40.000 0.00 0.00 44.74 2.74
10 11 5.360591 CAAAAGTGTAGTTCCACTCTCAGT 58.639 41.667 0.00 0.00 44.74 3.41
11 12 4.212214 GCAAAAGTGTAGTTCCACTCTCAG 59.788 45.833 0.00 0.00 44.74 3.35
12 13 4.127171 GCAAAAGTGTAGTTCCACTCTCA 58.873 43.478 0.00 0.00 44.74 3.27
13 14 4.127171 TGCAAAAGTGTAGTTCCACTCTC 58.873 43.478 0.00 0.00 44.74 3.20
14 15 4.150897 TGCAAAAGTGTAGTTCCACTCT 57.849 40.909 0.00 0.00 44.74 3.24
15 16 4.893424 TTGCAAAAGTGTAGTTCCACTC 57.107 40.909 0.00 0.00 44.74 3.51
17 18 4.546570 GGATTGCAAAAGTGTAGTTCCAC 58.453 43.478 1.71 0.00 35.53 4.02
18 19 3.572255 GGGATTGCAAAAGTGTAGTTCCA 59.428 43.478 1.71 0.00 30.09 3.53
19 20 3.572255 TGGGATTGCAAAAGTGTAGTTCC 59.428 43.478 1.71 1.90 0.00 3.62
20 21 4.278419 AGTGGGATTGCAAAAGTGTAGTTC 59.722 41.667 1.71 0.00 0.00 3.01
21 22 4.215109 AGTGGGATTGCAAAAGTGTAGTT 58.785 39.130 1.71 0.00 0.00 2.24
22 23 3.832527 AGTGGGATTGCAAAAGTGTAGT 58.167 40.909 1.71 0.00 0.00 2.73
23 24 5.415701 ACATAGTGGGATTGCAAAAGTGTAG 59.584 40.000 1.71 0.00 0.00 2.74
24 25 5.321102 ACATAGTGGGATTGCAAAAGTGTA 58.679 37.500 1.71 0.00 0.00 2.90
25 26 4.151883 ACATAGTGGGATTGCAAAAGTGT 58.848 39.130 1.71 0.00 0.00 3.55
26 27 4.789012 ACATAGTGGGATTGCAAAAGTG 57.211 40.909 1.71 0.00 0.00 3.16
27 28 4.832266 TCAACATAGTGGGATTGCAAAAGT 59.168 37.500 1.71 0.00 0.00 2.66
28 29 5.183713 TCTCAACATAGTGGGATTGCAAAAG 59.816 40.000 1.71 0.00 0.00 2.27
29 30 5.076182 TCTCAACATAGTGGGATTGCAAAA 58.924 37.500 1.71 0.00 0.00 2.44
30 31 4.661222 TCTCAACATAGTGGGATTGCAAA 58.339 39.130 1.71 0.00 0.00 3.68
31 32 4.299586 TCTCAACATAGTGGGATTGCAA 57.700 40.909 0.00 0.00 0.00 4.08
32 33 3.998913 TCTCAACATAGTGGGATTGCA 57.001 42.857 0.00 0.00 0.00 4.08
33 34 4.517285 TCTTCTCAACATAGTGGGATTGC 58.483 43.478 0.00 0.00 0.00 3.56
34 35 7.636150 AAATCTTCTCAACATAGTGGGATTG 57.364 36.000 0.00 0.00 0.00 2.67
35 36 9.753674 TTAAAATCTTCTCAACATAGTGGGATT 57.246 29.630 0.00 0.00 0.00 3.01
36 37 9.753674 TTTAAAATCTTCTCAACATAGTGGGAT 57.246 29.630 0.00 0.00 0.00 3.85
37 38 9.010029 GTTTAAAATCTTCTCAACATAGTGGGA 57.990 33.333 0.00 0.00 0.00 4.37
38 39 8.244113 GGTTTAAAATCTTCTCAACATAGTGGG 58.756 37.037 0.00 0.00 0.00 4.61
39 40 7.962918 CGGTTTAAAATCTTCTCAACATAGTGG 59.037 37.037 0.00 0.00 0.00 4.00
40 41 8.504005 ACGGTTTAAAATCTTCTCAACATAGTG 58.496 33.333 0.00 0.00 0.00 2.74
41 42 8.617290 ACGGTTTAAAATCTTCTCAACATAGT 57.383 30.769 0.00 0.00 0.00 2.12
42 43 9.893305 AAACGGTTTAAAATCTTCTCAACATAG 57.107 29.630 3.90 0.00 0.00 2.23
44 45 9.030301 CAAAACGGTTTAAAATCTTCTCAACAT 57.970 29.630 6.53 0.00 0.00 2.71
45 46 7.489757 CCAAAACGGTTTAAAATCTTCTCAACA 59.510 33.333 6.53 0.00 0.00 3.33
46 47 7.703197 TCCAAAACGGTTTAAAATCTTCTCAAC 59.297 33.333 6.53 0.00 35.57 3.18
47 48 7.773149 TCCAAAACGGTTTAAAATCTTCTCAA 58.227 30.769 6.53 0.00 35.57 3.02
48 49 7.336161 TCCAAAACGGTTTAAAATCTTCTCA 57.664 32.000 6.53 0.00 35.57 3.27
56 57 9.819267 AGTTCAAATATCCAAAACGGTTTAAAA 57.181 25.926 6.53 0.00 35.57 1.52
57 58 9.250624 CAGTTCAAATATCCAAAACGGTTTAAA 57.749 29.630 6.53 0.00 35.57 1.52
58 59 7.382759 GCAGTTCAAATATCCAAAACGGTTTAA 59.617 33.333 6.53 0.00 35.57 1.52
59 60 6.864165 GCAGTTCAAATATCCAAAACGGTTTA 59.136 34.615 6.53 0.00 35.57 2.01
60 61 5.694458 GCAGTTCAAATATCCAAAACGGTTT 59.306 36.000 0.00 0.00 35.57 3.27
61 62 5.221342 TGCAGTTCAAATATCCAAAACGGTT 60.221 36.000 0.00 0.00 35.57 4.44
62 63 4.279671 TGCAGTTCAAATATCCAAAACGGT 59.720 37.500 0.00 0.00 35.57 4.83
63 64 4.804108 TGCAGTTCAAATATCCAAAACGG 58.196 39.130 0.00 0.00 0.00 4.44
64 65 6.346518 GGTTTGCAGTTCAAATATCCAAAACG 60.347 38.462 0.00 0.00 45.43 3.60
65 66 6.705825 AGGTTTGCAGTTCAAATATCCAAAAC 59.294 34.615 0.00 0.00 45.43 2.43
66 67 6.825610 AGGTTTGCAGTTCAAATATCCAAAA 58.174 32.000 0.00 0.00 45.43 2.44
67 68 6.418057 AGGTTTGCAGTTCAAATATCCAAA 57.582 33.333 0.00 0.00 45.43 3.28
68 69 6.267471 AGAAGGTTTGCAGTTCAAATATCCAA 59.733 34.615 0.00 0.00 45.43 3.53
69 70 5.774690 AGAAGGTTTGCAGTTCAAATATCCA 59.225 36.000 0.00 0.00 45.43 3.41
70 71 6.095377 CAGAAGGTTTGCAGTTCAAATATCC 58.905 40.000 0.00 0.00 45.43 2.59
71 72 5.574443 GCAGAAGGTTTGCAGTTCAAATATC 59.426 40.000 0.00 0.00 45.43 1.63
72 73 5.010922 TGCAGAAGGTTTGCAGTTCAAATAT 59.989 36.000 0.00 0.00 45.89 1.28
73 74 4.340666 TGCAGAAGGTTTGCAGTTCAAATA 59.659 37.500 0.00 0.00 45.89 1.40
74 75 3.132646 TGCAGAAGGTTTGCAGTTCAAAT 59.867 39.130 0.00 0.00 45.89 2.32
75 76 2.495270 TGCAGAAGGTTTGCAGTTCAAA 59.505 40.909 0.00 0.00 45.89 2.69
76 77 2.098614 TGCAGAAGGTTTGCAGTTCAA 58.901 42.857 0.00 0.00 45.89 2.69
77 78 1.761449 TGCAGAAGGTTTGCAGTTCA 58.239 45.000 0.00 0.00 45.89 3.18
83 84 0.459489 TGGTGTTGCAGAAGGTTTGC 59.541 50.000 0.00 0.00 41.86 3.68
84 85 4.218200 TCATATGGTGTTGCAGAAGGTTTG 59.782 41.667 2.13 0.00 0.00 2.93
85 86 4.406456 TCATATGGTGTTGCAGAAGGTTT 58.594 39.130 2.13 0.00 0.00 3.27
86 87 4.032960 TCATATGGTGTTGCAGAAGGTT 57.967 40.909 2.13 0.00 0.00 3.50
87 88 3.719268 TCATATGGTGTTGCAGAAGGT 57.281 42.857 2.13 0.00 0.00 3.50
88 89 3.567164 GGATCATATGGTGTTGCAGAAGG 59.433 47.826 2.13 0.00 0.00 3.46
89 90 3.249320 CGGATCATATGGTGTTGCAGAAG 59.751 47.826 2.13 0.00 0.00 2.85
90 91 3.205338 CGGATCATATGGTGTTGCAGAA 58.795 45.455 2.13 0.00 0.00 3.02
91 92 2.170397 ACGGATCATATGGTGTTGCAGA 59.830 45.455 2.13 0.00 0.00 4.26
92 93 2.564771 ACGGATCATATGGTGTTGCAG 58.435 47.619 2.13 0.00 0.00 4.41
93 94 2.708216 ACGGATCATATGGTGTTGCA 57.292 45.000 2.13 0.00 0.00 4.08
94 95 4.104776 CAAAACGGATCATATGGTGTTGC 58.895 43.478 2.13 0.00 0.00 4.17
95 96 4.397730 TCCAAAACGGATCATATGGTGTTG 59.602 41.667 2.13 4.56 39.64 3.33
96 97 4.594970 TCCAAAACGGATCATATGGTGTT 58.405 39.130 2.13 0.00 39.64 3.32
97 98 4.199310 CTCCAAAACGGATCATATGGTGT 58.801 43.478 2.13 0.00 45.19 4.16
98 99 3.565482 CCTCCAAAACGGATCATATGGTG 59.435 47.826 2.13 0.00 45.19 4.17
99 100 3.202151 ACCTCCAAAACGGATCATATGGT 59.798 43.478 2.13 0.00 45.19 3.55
100 101 3.565482 CACCTCCAAAACGGATCATATGG 59.435 47.826 2.13 0.00 45.19 2.74
101 102 3.003689 GCACCTCCAAAACGGATCATATG 59.996 47.826 0.00 0.00 45.19 1.78
102 103 3.214328 GCACCTCCAAAACGGATCATAT 58.786 45.455 0.00 0.00 45.19 1.78
103 104 2.639065 GCACCTCCAAAACGGATCATA 58.361 47.619 0.00 0.00 45.19 2.15
104 105 1.463674 GCACCTCCAAAACGGATCAT 58.536 50.000 0.00 0.00 45.19 2.45
105 106 0.608035 GGCACCTCCAAAACGGATCA 60.608 55.000 0.00 0.00 45.19 2.92
106 107 2.180674 GGCACCTCCAAAACGGATC 58.819 57.895 0.00 0.00 45.19 3.36
107 108 4.415783 GGCACCTCCAAAACGGAT 57.584 55.556 0.00 0.00 45.19 4.18
122 123 3.537874 ACCGACGATGCTAGGGGC 61.538 66.667 0.00 0.00 42.22 5.80
123 124 2.417516 CACCGACGATGCTAGGGG 59.582 66.667 0.00 0.00 0.00 4.79
124 125 2.417516 CCACCGACGATGCTAGGG 59.582 66.667 0.00 0.00 0.00 3.53
125 126 2.417516 CCCACCGACGATGCTAGG 59.582 66.667 0.00 0.00 0.00 3.02
126 127 2.279517 GCCCACCGACGATGCTAG 60.280 66.667 0.00 0.00 0.00 3.42
127 128 4.201679 CGCCCACCGACGATGCTA 62.202 66.667 0.00 0.00 40.02 3.49
130 131 4.735132 ACACGCCCACCGACGATG 62.735 66.667 0.00 0.00 41.02 3.84
131 132 4.735132 CACACGCCCACCGACGAT 62.735 66.667 0.00 0.00 41.02 3.73
138 139 4.250305 ACACCTCCACACGCCCAC 62.250 66.667 0.00 0.00 0.00 4.61
139 140 4.248842 CACACCTCCACACGCCCA 62.249 66.667 0.00 0.00 0.00 5.36
140 141 4.250305 ACACACCTCCACACGCCC 62.250 66.667 0.00 0.00 0.00 6.13
141 142 2.665185 GACACACCTCCACACGCC 60.665 66.667 0.00 0.00 0.00 5.68
142 143 1.664965 GAGACACACCTCCACACGC 60.665 63.158 0.00 0.00 0.00 5.34
143 144 4.655527 GAGACACACCTCCACACG 57.344 61.111 0.00 0.00 0.00 4.49
149 150 0.247736 ATTCGCAGGAGACACACCTC 59.752 55.000 0.00 0.00 35.35 3.85
150 151 0.247736 GATTCGCAGGAGACACACCT 59.752 55.000 0.00 0.00 38.40 4.00
151 152 0.247736 AGATTCGCAGGAGACACACC 59.752 55.000 0.00 0.00 0.00 4.16
152 153 2.086054 AAGATTCGCAGGAGACACAC 57.914 50.000 0.00 0.00 0.00 3.82
153 154 2.300152 AGAAAGATTCGCAGGAGACACA 59.700 45.455 0.00 0.00 34.02 3.72
154 155 2.966050 AGAAAGATTCGCAGGAGACAC 58.034 47.619 0.00 0.00 34.02 3.67
155 156 3.685139 AAGAAAGATTCGCAGGAGACA 57.315 42.857 0.00 0.00 34.02 3.41
156 157 3.126000 CCAAAGAAAGATTCGCAGGAGAC 59.874 47.826 0.00 0.00 34.02 3.36
157 158 3.244561 ACCAAAGAAAGATTCGCAGGAGA 60.245 43.478 0.00 0.00 34.02 3.71
158 159 3.077359 ACCAAAGAAAGATTCGCAGGAG 58.923 45.455 0.00 0.00 34.02 3.69
159 160 2.813754 CACCAAAGAAAGATTCGCAGGA 59.186 45.455 0.00 0.00 34.02 3.86
160 161 2.095059 CCACCAAAGAAAGATTCGCAGG 60.095 50.000 0.00 0.00 34.02 4.85
161 162 2.813754 TCCACCAAAGAAAGATTCGCAG 59.186 45.455 0.00 0.00 34.02 5.18
162 163 2.857483 TCCACCAAAGAAAGATTCGCA 58.143 42.857 0.00 0.00 34.02 5.10
163 164 4.440839 AATCCACCAAAGAAAGATTCGC 57.559 40.909 0.00 0.00 34.02 4.70
164 165 4.622740 GCAAATCCACCAAAGAAAGATTCG 59.377 41.667 0.00 0.00 34.02 3.34
165 166 5.787380 AGCAAATCCACCAAAGAAAGATTC 58.213 37.500 0.00 0.00 0.00 2.52
166 167 5.813513 AGCAAATCCACCAAAGAAAGATT 57.186 34.783 0.00 0.00 0.00 2.40
167 168 5.511888 CCAAGCAAATCCACCAAAGAAAGAT 60.512 40.000 0.00 0.00 0.00 2.40
168 169 4.202243 CCAAGCAAATCCACCAAAGAAAGA 60.202 41.667 0.00 0.00 0.00 2.52
169 170 4.060205 CCAAGCAAATCCACCAAAGAAAG 58.940 43.478 0.00 0.00 0.00 2.62
170 171 3.708631 TCCAAGCAAATCCACCAAAGAAA 59.291 39.130 0.00 0.00 0.00 2.52
171 172 3.303938 TCCAAGCAAATCCACCAAAGAA 58.696 40.909 0.00 0.00 0.00 2.52
172 173 2.956132 TCCAAGCAAATCCACCAAAGA 58.044 42.857 0.00 0.00 0.00 2.52
173 174 3.512724 AGATCCAAGCAAATCCACCAAAG 59.487 43.478 0.00 0.00 0.00 2.77
174 175 3.258872 CAGATCCAAGCAAATCCACCAAA 59.741 43.478 0.00 0.00 0.00 3.28
175 176 2.827322 CAGATCCAAGCAAATCCACCAA 59.173 45.455 0.00 0.00 0.00 3.67
176 177 2.449464 CAGATCCAAGCAAATCCACCA 58.551 47.619 0.00 0.00 0.00 4.17
177 178 1.753073 CCAGATCCAAGCAAATCCACC 59.247 52.381 0.00 0.00 0.00 4.61
178 179 2.450476 ACCAGATCCAAGCAAATCCAC 58.550 47.619 0.00 0.00 0.00 4.02
179 180 2.827322 CAACCAGATCCAAGCAAATCCA 59.173 45.455 0.00 0.00 0.00 3.41
180 181 2.827921 ACAACCAGATCCAAGCAAATCC 59.172 45.455 0.00 0.00 0.00 3.01
181 182 3.426695 CGACAACCAGATCCAAGCAAATC 60.427 47.826 0.00 0.00 0.00 2.17
182 183 2.489329 CGACAACCAGATCCAAGCAAAT 59.511 45.455 0.00 0.00 0.00 2.32
183 184 1.879380 CGACAACCAGATCCAAGCAAA 59.121 47.619 0.00 0.00 0.00 3.68
184 185 1.202758 ACGACAACCAGATCCAAGCAA 60.203 47.619 0.00 0.00 0.00 3.91
185 186 0.396435 ACGACAACCAGATCCAAGCA 59.604 50.000 0.00 0.00 0.00 3.91
186 187 1.464997 GAACGACAACCAGATCCAAGC 59.535 52.381 0.00 0.00 0.00 4.01
187 188 1.726791 CGAACGACAACCAGATCCAAG 59.273 52.381 0.00 0.00 0.00 3.61
188 189 1.069513 ACGAACGACAACCAGATCCAA 59.930 47.619 0.14 0.00 0.00 3.53
189 190 0.677288 ACGAACGACAACCAGATCCA 59.323 50.000 0.14 0.00 0.00 3.41
190 191 1.792006 AACGAACGACAACCAGATCC 58.208 50.000 0.14 0.00 0.00 3.36
191 192 3.660904 CGAAAACGAACGACAACCAGATC 60.661 47.826 0.14 0.00 0.00 2.75
192 193 2.220133 CGAAAACGAACGACAACCAGAT 59.780 45.455 0.14 0.00 0.00 2.90
193 194 1.589320 CGAAAACGAACGACAACCAGA 59.411 47.619 0.14 0.00 0.00 3.86
194 195 1.325338 ACGAAAACGAACGACAACCAG 59.675 47.619 0.14 0.00 0.00 4.00
195 196 1.357907 ACGAAAACGAACGACAACCA 58.642 45.000 0.14 0.00 0.00 3.67
196 197 2.095875 CAACGAAAACGAACGACAACC 58.904 47.619 0.14 0.00 0.00 3.77
197 198 2.519188 CACAACGAAAACGAACGACAAC 59.481 45.455 0.14 0.00 0.00 3.32
198 199 2.157279 ACACAACGAAAACGAACGACAA 59.843 40.909 0.14 0.00 0.00 3.18
199 200 1.725706 ACACAACGAAAACGAACGACA 59.274 42.857 0.14 0.00 0.00 4.35
200 201 2.088449 CACACAACGAAAACGAACGAC 58.912 47.619 0.14 0.00 0.00 4.34
201 202 1.725706 ACACACAACGAAAACGAACGA 59.274 42.857 0.14 0.00 0.00 3.85
202 203 2.088449 GACACACAACGAAAACGAACG 58.912 47.619 0.00 0.00 0.00 3.95
203 204 3.378959 AGACACACAACGAAAACGAAC 57.621 42.857 0.00 0.00 0.00 3.95
204 205 3.432592 TGAAGACACACAACGAAAACGAA 59.567 39.130 0.00 0.00 0.00 3.85
205 206 2.994578 TGAAGACACACAACGAAAACGA 59.005 40.909 0.00 0.00 0.00 3.85
206 207 3.377434 TGAAGACACACAACGAAAACG 57.623 42.857 0.00 0.00 0.00 3.60
213 214 5.992217 AGGATCTAAGTTGAAGACACACAAC 59.008 40.000 0.00 0.00 44.27 3.32
214 215 6.174720 AGGATCTAAGTTGAAGACACACAA 57.825 37.500 0.00 0.00 0.00 3.33
215 216 5.808366 AGGATCTAAGTTGAAGACACACA 57.192 39.130 0.00 0.00 0.00 3.72
216 217 6.128795 CGAAAGGATCTAAGTTGAAGACACAC 60.129 42.308 0.00 0.00 0.00 3.82
217 218 5.926542 CGAAAGGATCTAAGTTGAAGACACA 59.073 40.000 0.00 0.00 0.00 3.72
218 219 6.157211 TCGAAAGGATCTAAGTTGAAGACAC 58.843 40.000 0.00 0.00 0.00 3.67
219 220 6.340962 TCGAAAGGATCTAAGTTGAAGACA 57.659 37.500 0.00 0.00 0.00 3.41
223 224 9.424319 GCATATATCGAAAGGATCTAAGTTGAA 57.576 33.333 0.00 0.00 36.55 2.69
224 225 8.807118 AGCATATATCGAAAGGATCTAAGTTGA 58.193 33.333 0.00 0.00 36.55 3.18
225 226 8.994429 AGCATATATCGAAAGGATCTAAGTTG 57.006 34.615 0.00 0.00 36.55 3.16
227 228 9.469097 AGTAGCATATATCGAAAGGATCTAAGT 57.531 33.333 0.00 0.00 36.55 2.24
228 229 9.944663 GAGTAGCATATATCGAAAGGATCTAAG 57.055 37.037 0.00 0.00 36.55 2.18
229 230 9.688091 AGAGTAGCATATATCGAAAGGATCTAA 57.312 33.333 0.00 0.00 36.55 2.10
230 231 9.688091 AAGAGTAGCATATATCGAAAGGATCTA 57.312 33.333 0.00 0.00 36.55 1.98
231 232 8.588290 AAGAGTAGCATATATCGAAAGGATCT 57.412 34.615 0.00 0.00 36.55 2.75
232 233 8.462811 TGAAGAGTAGCATATATCGAAAGGATC 58.537 37.037 0.00 0.00 36.55 3.36
233 234 8.354711 TGAAGAGTAGCATATATCGAAAGGAT 57.645 34.615 0.00 0.00 39.25 3.24
234 235 7.761038 TGAAGAGTAGCATATATCGAAAGGA 57.239 36.000 0.00 0.00 0.00 3.36
239 240 8.624776 CCACATATGAAGAGTAGCATATATCGA 58.375 37.037 10.38 0.00 35.98 3.59
240 241 8.409371 ACCACATATGAAGAGTAGCATATATCG 58.591 37.037 10.38 0.00 35.98 2.92
241 242 9.526713 CACCACATATGAAGAGTAGCATATATC 57.473 37.037 10.38 0.00 35.98 1.63
242 243 9.259832 TCACCACATATGAAGAGTAGCATATAT 57.740 33.333 10.38 0.00 35.98 0.86
243 244 8.650143 TCACCACATATGAAGAGTAGCATATA 57.350 34.615 10.38 0.00 35.98 0.86
244 245 7.544804 TCACCACATATGAAGAGTAGCATAT 57.455 36.000 10.38 0.00 38.01 1.78
245 246 6.976934 TCACCACATATGAAGAGTAGCATA 57.023 37.500 10.38 0.00 0.00 3.14
246 247 5.876651 TCACCACATATGAAGAGTAGCAT 57.123 39.130 10.38 0.00 0.00 3.79
247 248 5.876651 ATCACCACATATGAAGAGTAGCA 57.123 39.130 10.38 0.00 0.00 3.49
248 249 5.049818 GCAATCACCACATATGAAGAGTAGC 60.050 44.000 10.38 0.99 0.00 3.58
249 250 6.202379 CAGCAATCACCACATATGAAGAGTAG 59.798 42.308 10.38 0.00 0.00 2.57
250 251 6.051074 CAGCAATCACCACATATGAAGAGTA 58.949 40.000 10.38 0.00 0.00 2.59
251 252 4.880120 CAGCAATCACCACATATGAAGAGT 59.120 41.667 10.38 0.00 0.00 3.24
252 253 4.880120 ACAGCAATCACCACATATGAAGAG 59.120 41.667 10.38 0.00 0.00 2.85
253 254 4.847198 ACAGCAATCACCACATATGAAGA 58.153 39.130 10.38 1.89 0.00 2.87
254 255 5.356190 AGAACAGCAATCACCACATATGAAG 59.644 40.000 10.38 2.38 0.00 3.02
255 256 5.255687 AGAACAGCAATCACCACATATGAA 58.744 37.500 10.38 0.00 0.00 2.57
256 257 4.847198 AGAACAGCAATCACCACATATGA 58.153 39.130 10.38 0.00 0.00 2.15
257 258 5.819379 ACTAGAACAGCAATCACCACATATG 59.181 40.000 0.00 0.00 0.00 1.78
258 259 5.819379 CACTAGAACAGCAATCACCACATAT 59.181 40.000 0.00 0.00 0.00 1.78
259 260 5.178061 CACTAGAACAGCAATCACCACATA 58.822 41.667 0.00 0.00 0.00 2.29
260 261 4.005650 CACTAGAACAGCAATCACCACAT 58.994 43.478 0.00 0.00 0.00 3.21
261 262 3.402110 CACTAGAACAGCAATCACCACA 58.598 45.455 0.00 0.00 0.00 4.17
262 263 2.160417 GCACTAGAACAGCAATCACCAC 59.840 50.000 0.00 0.00 0.00 4.16
263 264 2.426522 GCACTAGAACAGCAATCACCA 58.573 47.619 0.00 0.00 0.00 4.17
264 265 1.394917 CGCACTAGAACAGCAATCACC 59.605 52.381 0.00 0.00 0.00 4.02
265 266 2.069273 ACGCACTAGAACAGCAATCAC 58.931 47.619 0.00 0.00 0.00 3.06
266 267 2.337583 GACGCACTAGAACAGCAATCA 58.662 47.619 0.00 0.00 0.00 2.57
267 268 1.321743 CGACGCACTAGAACAGCAATC 59.678 52.381 0.00 0.00 0.00 2.67
268 269 1.350193 CGACGCACTAGAACAGCAAT 58.650 50.000 0.00 0.00 0.00 3.56
269 270 0.666274 CCGACGCACTAGAACAGCAA 60.666 55.000 0.00 0.00 0.00 3.91
270 271 1.080772 CCGACGCACTAGAACAGCA 60.081 57.895 0.00 0.00 0.00 4.41
271 272 0.666577 AACCGACGCACTAGAACAGC 60.667 55.000 0.00 0.00 0.00 4.40
272 273 1.779569 AAACCGACGCACTAGAACAG 58.220 50.000 0.00 0.00 0.00 3.16
273 274 2.228138 AAAACCGACGCACTAGAACA 57.772 45.000 0.00 0.00 0.00 3.18
274 275 3.061697 CCATAAAACCGACGCACTAGAAC 59.938 47.826 0.00 0.00 0.00 3.01
275 276 3.255725 CCATAAAACCGACGCACTAGAA 58.744 45.455 0.00 0.00 0.00 2.10
276 277 2.417651 CCCATAAAACCGACGCACTAGA 60.418 50.000 0.00 0.00 0.00 2.43
277 278 1.931172 CCCATAAAACCGACGCACTAG 59.069 52.381 0.00 0.00 0.00 2.57
278 279 1.405797 CCCCATAAAACCGACGCACTA 60.406 52.381 0.00 0.00 0.00 2.74
279 280 0.675522 CCCCATAAAACCGACGCACT 60.676 55.000 0.00 0.00 0.00 4.40
280 281 1.798087 CCCCATAAAACCGACGCAC 59.202 57.895 0.00 0.00 0.00 5.34
281 282 2.041686 GCCCCATAAAACCGACGCA 61.042 57.895 0.00 0.00 0.00 5.24
282 283 2.767445 GGCCCCATAAAACCGACGC 61.767 63.158 0.00 0.00 0.00 5.19
283 284 0.678684 AAGGCCCCATAAAACCGACG 60.679 55.000 0.00 0.00 0.00 5.12
284 285 2.294979 CTAAGGCCCCATAAAACCGAC 58.705 52.381 0.00 0.00 0.00 4.79
285 286 1.409101 GCTAAGGCCCCATAAAACCGA 60.409 52.381 0.00 0.00 0.00 4.69
286 287 1.029681 GCTAAGGCCCCATAAAACCG 58.970 55.000 0.00 0.00 0.00 4.44
287 288 2.153034 TGCTAAGGCCCCATAAAACC 57.847 50.000 0.00 0.00 37.74 3.27
288 289 3.068165 GTCATGCTAAGGCCCCATAAAAC 59.932 47.826 0.00 0.00 37.74 2.43
289 290 3.295973 GTCATGCTAAGGCCCCATAAAA 58.704 45.455 0.00 0.00 37.74 1.52
290 291 2.748132 CGTCATGCTAAGGCCCCATAAA 60.748 50.000 0.00 0.00 37.74 1.40
291 292 1.202758 CGTCATGCTAAGGCCCCATAA 60.203 52.381 0.00 0.00 37.74 1.90
292 293 0.396435 CGTCATGCTAAGGCCCCATA 59.604 55.000 0.00 0.00 37.74 2.74
293 294 1.149174 CGTCATGCTAAGGCCCCAT 59.851 57.895 0.00 0.00 37.74 4.00
294 295 1.992834 TCGTCATGCTAAGGCCCCA 60.993 57.895 0.00 0.00 37.74 4.96
295 296 1.523938 GTCGTCATGCTAAGGCCCC 60.524 63.158 0.00 0.00 37.74 5.80
296 297 0.107654 AAGTCGTCATGCTAAGGCCC 60.108 55.000 0.00 0.00 37.74 5.80
297 298 1.134670 AGAAGTCGTCATGCTAAGGCC 60.135 52.381 0.00 0.00 37.74 5.19
298 299 2.301577 AGAAGTCGTCATGCTAAGGC 57.698 50.000 0.00 0.00 39.26 4.35
299 300 3.614616 GTCAAGAAGTCGTCATGCTAAGG 59.385 47.826 0.00 0.00 0.00 2.69
300 301 4.325741 CAGTCAAGAAGTCGTCATGCTAAG 59.674 45.833 0.00 0.00 0.00 2.18
301 302 4.237724 CAGTCAAGAAGTCGTCATGCTAA 58.762 43.478 0.00 0.00 0.00 3.09
302 303 3.255888 ACAGTCAAGAAGTCGTCATGCTA 59.744 43.478 0.00 0.00 0.00 3.49
303 304 2.036475 ACAGTCAAGAAGTCGTCATGCT 59.964 45.455 0.00 0.00 0.00 3.79
304 305 2.408050 ACAGTCAAGAAGTCGTCATGC 58.592 47.619 0.00 0.00 0.00 4.06
305 306 3.906998 AGACAGTCAAGAAGTCGTCATG 58.093 45.455 2.66 0.00 37.36 3.07
306 307 5.906113 ATAGACAGTCAAGAAGTCGTCAT 57.094 39.130 2.66 0.00 37.36 3.06
307 308 5.707242 AATAGACAGTCAAGAAGTCGTCA 57.293 39.130 2.66 0.00 37.36 4.35
308 309 6.609533 TGTAATAGACAGTCAAGAAGTCGTC 58.390 40.000 2.66 0.00 37.36 4.20
309 310 6.570672 TGTAATAGACAGTCAAGAAGTCGT 57.429 37.500 2.66 0.00 37.36 4.34
310 311 6.861572 TGTTGTAATAGACAGTCAAGAAGTCG 59.138 38.462 2.66 0.00 39.88 4.18
311 312 8.589335 TTGTTGTAATAGACAGTCAAGAAGTC 57.411 34.615 2.66 0.00 39.88 3.01
312 313 8.204836 ACTTGTTGTAATAGACAGTCAAGAAGT 58.795 33.333 20.65 11.10 44.96 3.01
313 314 8.594881 ACTTGTTGTAATAGACAGTCAAGAAG 57.405 34.615 20.65 4.78 44.96 2.85
314 315 8.958119 AACTTGTTGTAATAGACAGTCAAGAA 57.042 30.769 20.65 0.00 44.96 2.52
315 316 8.958119 AAACTTGTTGTAATAGACAGTCAAGA 57.042 30.769 20.65 0.00 44.96 3.02
316 317 9.438291 CAAAACTTGTTGTAATAGACAGTCAAG 57.562 33.333 2.66 16.04 46.09 3.02
317 318 8.952278 ACAAAACTTGTTGTAATAGACAGTCAA 58.048 29.630 2.66 0.00 42.22 3.18
318 319 8.500753 ACAAAACTTGTTGTAATAGACAGTCA 57.499 30.769 2.66 0.00 42.22 3.41
319 320 8.068380 GGACAAAACTTGTTGTAATAGACAGTC 58.932 37.037 0.00 0.00 45.52 3.51
320 321 7.773690 AGGACAAAACTTGTTGTAATAGACAGT 59.226 33.333 0.00 0.00 45.52 3.55
321 322 8.070171 CAGGACAAAACTTGTTGTAATAGACAG 58.930 37.037 0.00 0.00 45.52 3.51
322 323 7.554835 ACAGGACAAAACTTGTTGTAATAGACA 59.445 33.333 0.00 0.00 45.52 3.41
323 324 7.927048 ACAGGACAAAACTTGTTGTAATAGAC 58.073 34.615 0.00 0.00 45.52 2.59
324 325 8.514330 AACAGGACAAAACTTGTTGTAATAGA 57.486 30.769 0.00 0.00 45.52 1.98
325 326 9.659830 GTAACAGGACAAAACTTGTTGTAATAG 57.340 33.333 0.00 0.00 45.52 1.73
326 327 8.336806 CGTAACAGGACAAAACTTGTTGTAATA 58.663 33.333 0.00 0.00 45.52 0.98
327 328 7.066043 TCGTAACAGGACAAAACTTGTTGTAAT 59.934 33.333 0.00 0.00 45.52 1.89
328 329 6.370994 TCGTAACAGGACAAAACTTGTTGTAA 59.629 34.615 0.00 0.00 45.52 2.41
329 330 5.873712 TCGTAACAGGACAAAACTTGTTGTA 59.126 36.000 0.00 0.00 45.52 2.41
330 331 4.696402 TCGTAACAGGACAAAACTTGTTGT 59.304 37.500 0.00 0.00 45.52 3.32
331 332 5.224562 TCGTAACAGGACAAAACTTGTTG 57.775 39.130 0.00 0.00 45.52 3.33
332 333 7.412063 GTTATCGTAACAGGACAAAACTTGTT 58.588 34.615 0.00 0.00 45.52 2.83
333 334 9.101828 CCGTTATCGTAACAGGACAAAACTTGT 62.102 40.741 8.09 0.00 40.15 3.16
334 335 6.068931 CGTTATCGTAACAGGACAAAACTTG 58.931 40.000 8.09 0.00 0.00 3.16
335 336 5.178067 CCGTTATCGTAACAGGACAAAACTT 59.822 40.000 8.09 0.00 35.01 2.66
336 337 4.687483 CCGTTATCGTAACAGGACAAAACT 59.313 41.667 8.09 0.00 35.01 2.66
337 338 4.667415 GCCGTTATCGTAACAGGACAAAAC 60.667 45.833 15.46 0.00 35.01 2.43
338 339 3.432933 GCCGTTATCGTAACAGGACAAAA 59.567 43.478 15.46 0.00 35.01 2.44
339 340 2.995258 GCCGTTATCGTAACAGGACAAA 59.005 45.455 15.46 0.00 35.01 2.83
340 341 2.609350 GCCGTTATCGTAACAGGACAA 58.391 47.619 15.46 0.00 35.01 3.18
341 342 1.467883 CGCCGTTATCGTAACAGGACA 60.468 52.381 15.46 0.00 35.01 4.02
342 343 1.194495 CGCCGTTATCGTAACAGGAC 58.806 55.000 15.46 9.86 35.01 3.85
343 344 1.093972 TCGCCGTTATCGTAACAGGA 58.906 50.000 15.46 6.07 35.01 3.86
344 345 1.194495 GTCGCCGTTATCGTAACAGG 58.806 55.000 8.09 9.68 35.01 4.00
345 346 1.580704 GTGTCGCCGTTATCGTAACAG 59.419 52.381 8.09 0.01 35.01 3.16
346 347 1.616620 GTGTCGCCGTTATCGTAACA 58.383 50.000 8.09 0.00 35.01 2.41
347 348 0.562950 CGTGTCGCCGTTATCGTAAC 59.437 55.000 0.00 0.00 35.01 2.50
348 349 2.928801 CGTGTCGCCGTTATCGTAA 58.071 52.632 0.00 0.00 35.01 3.18
349 350 4.668666 CGTGTCGCCGTTATCGTA 57.331 55.556 0.00 0.00 35.01 3.43
368 369 2.734673 GCACTGAAGCGAGCCGAAG 61.735 63.158 0.00 0.00 0.00 3.79
369 370 2.715532 AAGCACTGAAGCGAGCCGAA 62.716 55.000 0.00 0.00 40.15 4.30
370 371 1.873270 TAAGCACTGAAGCGAGCCGA 61.873 55.000 0.00 0.00 40.15 5.54
371 372 0.807667 ATAAGCACTGAAGCGAGCCG 60.808 55.000 0.00 0.00 40.15 5.52
372 373 2.131183 CTATAAGCACTGAAGCGAGCC 58.869 52.381 0.00 0.00 40.15 4.70
373 374 2.815478 ACTATAAGCACTGAAGCGAGC 58.185 47.619 0.00 0.00 40.15 5.03
374 375 4.177026 ACAACTATAAGCACTGAAGCGAG 58.823 43.478 0.00 0.00 40.15 5.03
375 376 4.174009 GACAACTATAAGCACTGAAGCGA 58.826 43.478 0.00 0.00 40.15 4.93
376 377 3.000674 CGACAACTATAAGCACTGAAGCG 60.001 47.826 0.00 0.00 40.15 4.68
377 378 3.927142 ACGACAACTATAAGCACTGAAGC 59.073 43.478 0.00 0.00 0.00 3.86
378 379 6.253727 CCTAACGACAACTATAAGCACTGAAG 59.746 42.308 0.00 0.00 0.00 3.02
379 380 6.097356 CCTAACGACAACTATAAGCACTGAA 58.903 40.000 0.00 0.00 0.00 3.02
380 381 5.184479 ACCTAACGACAACTATAAGCACTGA 59.816 40.000 0.00 0.00 0.00 3.41
381 382 5.408356 ACCTAACGACAACTATAAGCACTG 58.592 41.667 0.00 0.00 0.00 3.66
382 383 5.656213 ACCTAACGACAACTATAAGCACT 57.344 39.130 0.00 0.00 0.00 4.40
383 384 7.919621 AGAATACCTAACGACAACTATAAGCAC 59.080 37.037 0.00 0.00 0.00 4.40
384 385 8.004087 AGAATACCTAACGACAACTATAAGCA 57.996 34.615 0.00 0.00 0.00 3.91
385 386 9.392021 GTAGAATACCTAACGACAACTATAAGC 57.608 37.037 0.00 0.00 34.89 3.09
386 387 9.591404 CGTAGAATACCTAACGACAACTATAAG 57.409 37.037 0.00 0.00 38.71 1.73
387 388 8.559536 CCGTAGAATACCTAACGACAACTATAA 58.440 37.037 0.00 0.00 38.71 0.98
388 389 7.931407 TCCGTAGAATACCTAACGACAACTATA 59.069 37.037 0.00 0.00 38.71 1.31
389 390 6.767902 TCCGTAGAATACCTAACGACAACTAT 59.232 38.462 0.00 0.00 38.71 2.12
390 391 6.112734 TCCGTAGAATACCTAACGACAACTA 58.887 40.000 0.00 0.00 38.71 2.24
391 392 4.943705 TCCGTAGAATACCTAACGACAACT 59.056 41.667 0.00 0.00 38.71 3.16
392 393 5.235305 TCCGTAGAATACCTAACGACAAC 57.765 43.478 0.00 0.00 38.71 3.32
393 394 6.455360 AATCCGTAGAATACCTAACGACAA 57.545 37.500 0.00 0.00 38.71 3.18
394 395 6.127647 ACAAATCCGTAGAATACCTAACGACA 60.128 38.462 0.00 0.00 38.71 4.35
395 396 6.268566 ACAAATCCGTAGAATACCTAACGAC 58.731 40.000 0.00 0.00 38.71 4.34
396 397 6.455360 ACAAATCCGTAGAATACCTAACGA 57.545 37.500 0.00 0.00 38.71 3.85
397 398 7.864379 ACATACAAATCCGTAGAATACCTAACG 59.136 37.037 0.00 0.00 38.71 3.18
427 428 8.994170 TCATGACAGTATAACGAACATCAAAAA 58.006 29.630 0.00 0.00 0.00 1.94
428 429 8.541133 TCATGACAGTATAACGAACATCAAAA 57.459 30.769 0.00 0.00 0.00 2.44
429 430 8.716646 ATCATGACAGTATAACGAACATCAAA 57.283 30.769 0.00 0.00 0.00 2.69
430 431 7.167468 CGATCATGACAGTATAACGAACATCAA 59.833 37.037 0.00 0.00 0.00 2.57
431 432 6.636850 CGATCATGACAGTATAACGAACATCA 59.363 38.462 0.00 0.00 0.00 3.07
432 433 6.088217 CCGATCATGACAGTATAACGAACATC 59.912 42.308 0.00 0.00 0.00 3.06
433 434 5.920840 CCGATCATGACAGTATAACGAACAT 59.079 40.000 0.00 0.00 0.00 2.71
434 435 5.066764 TCCGATCATGACAGTATAACGAACA 59.933 40.000 0.00 0.00 0.00 3.18
435 436 5.516996 TCCGATCATGACAGTATAACGAAC 58.483 41.667 0.00 0.00 0.00 3.95
436 437 5.529800 TCTCCGATCATGACAGTATAACGAA 59.470 40.000 0.00 0.00 0.00 3.85
437 438 5.049612 GTCTCCGATCATGACAGTATAACGA 60.050 44.000 0.00 0.00 0.00 3.85
438 439 5.147865 GTCTCCGATCATGACAGTATAACG 58.852 45.833 0.00 0.00 0.00 3.18
439 440 5.147865 CGTCTCCGATCATGACAGTATAAC 58.852 45.833 0.00 0.00 35.63 1.89
440 441 4.320275 GCGTCTCCGATCATGACAGTATAA 60.320 45.833 0.00 0.00 35.63 0.98
441 442 3.188667 GCGTCTCCGATCATGACAGTATA 59.811 47.826 0.00 0.00 35.63 1.47
442 443 2.030717 GCGTCTCCGATCATGACAGTAT 60.031 50.000 0.00 0.00 35.63 2.12
443 444 1.333931 GCGTCTCCGATCATGACAGTA 59.666 52.381 0.00 0.00 35.63 2.74
444 445 0.101399 GCGTCTCCGATCATGACAGT 59.899 55.000 0.00 0.00 35.63 3.55
445 446 0.101219 TGCGTCTCCGATCATGACAG 59.899 55.000 0.00 0.00 35.63 3.51
446 447 0.746659 ATGCGTCTCCGATCATGACA 59.253 50.000 0.00 0.00 35.63 3.58
447 448 2.706555 TATGCGTCTCCGATCATGAC 57.293 50.000 0.00 0.00 35.63 3.06
448 449 3.726291 TTTATGCGTCTCCGATCATGA 57.274 42.857 0.00 0.00 35.63 3.07
449 450 3.059966 CGATTTATGCGTCTCCGATCATG 59.940 47.826 0.00 0.00 35.63 3.07
450 451 3.245797 CGATTTATGCGTCTCCGATCAT 58.754 45.455 0.00 0.00 35.63 2.45
451 452 2.607038 CCGATTTATGCGTCTCCGATCA 60.607 50.000 0.00 0.00 35.63 2.92
452 453 1.986378 CCGATTTATGCGTCTCCGATC 59.014 52.381 0.00 0.00 35.63 3.69
453 454 1.611977 TCCGATTTATGCGTCTCCGAT 59.388 47.619 0.00 0.00 35.63 4.18
454 455 1.026584 TCCGATTTATGCGTCTCCGA 58.973 50.000 0.00 0.00 35.63 4.55
455 456 1.787155 CTTCCGATTTATGCGTCTCCG 59.213 52.381 0.00 0.00 37.07 4.63
456 457 2.822764 ACTTCCGATTTATGCGTCTCC 58.177 47.619 0.00 0.00 0.00 3.71
457 458 4.859629 AAACTTCCGATTTATGCGTCTC 57.140 40.909 0.00 0.00 0.00 3.36
458 459 5.622770 AAAAACTTCCGATTTATGCGTCT 57.377 34.783 0.00 0.00 0.00 4.18
497 498 2.125912 CCATCCGATCGCCCGATC 60.126 66.667 18.06 18.06 45.42 3.69
498 499 4.379243 GCCATCCGATCGCCCGAT 62.379 66.667 10.32 4.46 37.59 4.18
501 502 4.545706 TGTGCCATCCGATCGCCC 62.546 66.667 10.32 0.00 0.00 6.13
502 503 3.272334 GTGTGCCATCCGATCGCC 61.272 66.667 10.32 0.00 0.00 5.54
503 504 3.272334 GGTGTGCCATCCGATCGC 61.272 66.667 10.32 0.00 34.09 4.58
514 515 2.895372 CCTATTCGGCCGGTGTGC 60.895 66.667 27.83 0.00 0.00 4.57
515 516 1.227263 CTCCTATTCGGCCGGTGTG 60.227 63.158 27.83 13.40 0.00 3.82
516 517 3.090219 GCTCCTATTCGGCCGGTGT 62.090 63.158 27.83 14.10 0.00 4.16
517 518 2.280186 GCTCCTATTCGGCCGGTG 60.280 66.667 27.83 10.67 0.00 4.94
518 519 3.547513 GGCTCCTATTCGGCCGGT 61.548 66.667 27.83 17.24 36.37 5.28
522 523 1.158484 GGAAACGGCTCCTATTCGGC 61.158 60.000 0.00 0.00 32.21 5.54
530 531 1.167781 TTCGGTTTGGAAACGGCTCC 61.168 55.000 5.24 0.00 39.77 4.70
558 559 1.808411 GCCAGTCGGATTCAAAGTCA 58.192 50.000 0.00 0.00 0.00 3.41
605 606 1.209261 AGGAAGAAAGCCTAGCTGCTC 59.791 52.381 4.91 0.00 41.80 4.26
648 669 2.879002 CGCAAGCTAGATCTCCTCAA 57.121 50.000 0.00 0.00 0.00 3.02
970 993 4.147449 CCCGCGGATCAGTGCTCA 62.147 66.667 30.73 0.00 0.00 4.26
1342 1379 2.429739 GCTTGCGCTTGTCTTGGC 60.430 61.111 9.73 0.00 0.00 4.52
1404 1441 0.309302 ATCCATCTCGACGAAGCTCG 59.691 55.000 0.00 4.36 46.93 5.03
1441 1510 1.201647 TCTGAACCGGTCGACTCAATC 59.798 52.381 16.46 9.84 0.00 2.67
1442 1511 1.254026 TCTGAACCGGTCGACTCAAT 58.746 50.000 16.46 0.00 0.00 2.57
1443 1512 1.000607 CTTCTGAACCGGTCGACTCAA 60.001 52.381 16.46 0.00 0.00 3.02
1444 1513 0.596577 CTTCTGAACCGGTCGACTCA 59.403 55.000 16.46 7.11 0.00 3.41
1503 1582 4.748600 CCTCGTCACGTATGAGTATGACTA 59.251 45.833 0.00 0.00 39.29 2.59
1509 1588 3.257469 AGACCTCGTCACGTATGAGTA 57.743 47.619 0.00 0.00 39.29 2.59
1553 1635 5.048434 TCGTCTATGCAGATCCATCTACAAG 60.048 44.000 0.00 0.00 34.14 3.16
1555 1637 4.398319 TCGTCTATGCAGATCCATCTACA 58.602 43.478 0.00 0.00 34.88 2.74
1558 1640 3.831333 ACATCGTCTATGCAGATCCATCT 59.169 43.478 0.00 0.00 39.39 2.90
1562 1644 5.403766 CAGTAAACATCGTCTATGCAGATCC 59.596 44.000 0.00 0.00 39.39 3.36
1563 1645 5.980116 ACAGTAAACATCGTCTATGCAGATC 59.020 40.000 0.00 0.00 39.39 2.75
1565 1647 5.324784 ACAGTAAACATCGTCTATGCAGA 57.675 39.130 0.00 0.00 39.39 4.26
1566 1648 5.576774 TCAACAGTAAACATCGTCTATGCAG 59.423 40.000 0.00 0.00 39.39 4.41
1567 1649 5.474825 TCAACAGTAAACATCGTCTATGCA 58.525 37.500 0.00 0.00 39.39 3.96
1568 1650 6.403333 TTCAACAGTAAACATCGTCTATGC 57.597 37.500 0.00 0.00 39.39 3.14
1569 1651 6.090763 TGCTTCAACAGTAAACATCGTCTATG 59.909 38.462 0.00 0.00 41.74 2.23
1570 1652 6.163476 TGCTTCAACAGTAAACATCGTCTAT 58.837 36.000 0.00 0.00 0.00 1.98
1571 1653 5.534407 TGCTTCAACAGTAAACATCGTCTA 58.466 37.500 0.00 0.00 0.00 2.59
1617 2010 0.039074 CGTAGCCACAGGGATCGATC 60.039 60.000 17.36 17.36 35.59 3.69
1810 2256 1.302033 CGGCTTCTCAGGTTGCAGT 60.302 57.895 0.00 0.00 0.00 4.40
1846 2292 0.325296 AGTGGGGAATCAGCCTCGTA 60.325 55.000 0.00 0.00 0.00 3.43
1847 2293 1.201429 AAGTGGGGAATCAGCCTCGT 61.201 55.000 0.00 0.00 0.00 4.18
1882 2328 3.760035 CTCCACGACCTGGACCGG 61.760 72.222 0.00 0.00 44.99 5.28
1888 2334 1.450312 GCCATTCCTCCACGACCTG 60.450 63.158 0.00 0.00 0.00 4.00
1890 2336 1.026718 CAAGCCATTCCTCCACGACC 61.027 60.000 0.00 0.00 0.00 4.79
1981 2427 4.459089 GACCAGTCCGGCCTGCTC 62.459 72.222 7.07 0.00 39.03 4.26
1992 2438 0.541998 TCTCACGTCCATGGACCAGT 60.542 55.000 34.05 25.32 41.76 4.00
1993 2439 0.108615 GTCTCACGTCCATGGACCAG 60.109 60.000 34.05 26.42 41.76 4.00
1994 2440 0.830023 TGTCTCACGTCCATGGACCA 60.830 55.000 34.05 23.37 41.76 4.02
1995 2441 0.389948 GTGTCTCACGTCCATGGACC 60.390 60.000 34.05 21.26 41.76 4.46
1996 2442 3.123674 GTGTCTCACGTCCATGGAC 57.876 57.895 31.59 31.59 41.40 4.02
2006 2452 2.430921 CCGTCCTGCGTGTCTCAC 60.431 66.667 0.00 0.00 39.32 3.51
2007 2453 2.910479 ACCGTCCTGCGTGTCTCA 60.910 61.111 0.00 0.00 39.32 3.27
2008 2454 2.126424 GACCGTCCTGCGTGTCTC 60.126 66.667 0.00 0.00 37.60 3.36
2009 2455 4.039357 CGACCGTCCTGCGTGTCT 62.039 66.667 0.00 0.00 38.07 3.41
2012 2458 4.778415 CTCCGACCGTCCTGCGTG 62.778 72.222 0.00 0.00 39.32 5.34
2015 2461 2.221906 TTAAGCTCCGACCGTCCTGC 62.222 60.000 0.00 0.00 0.00 4.85
2017 2463 1.602327 GGTTAAGCTCCGACCGTCCT 61.602 60.000 0.00 0.00 0.00 3.85
2018 2464 1.153686 GGTTAAGCTCCGACCGTCC 60.154 63.158 0.00 0.00 0.00 4.79
2019 2465 4.491101 GGTTAAGCTCCGACCGTC 57.509 61.111 0.00 0.00 0.00 4.79
2026 2472 1.153429 ATGGCGACGGTTAAGCTCC 60.153 57.895 2.76 0.00 0.00 4.70
2028 2502 1.449601 CCATGGCGACGGTTAAGCT 60.450 57.895 0.00 0.00 0.00 3.74
2041 2515 0.460987 GGAGAAGACGACAGCCATGG 60.461 60.000 7.63 7.63 0.00 3.66
2043 2517 1.513158 CGGAGAAGACGACAGCCAT 59.487 57.895 0.00 0.00 0.00 4.40
2045 2519 2.507324 GCGGAGAAGACGACAGCC 60.507 66.667 0.00 0.00 0.00 4.85
2046 2520 2.493907 AAGGCGGAGAAGACGACAGC 62.494 60.000 0.00 0.00 43.13 4.40
2048 2522 0.319555 CAAAGGCGGAGAAGACGACA 60.320 55.000 0.00 0.00 43.13 4.35
2052 2526 3.579685 GCCAAAGGCGGAGAAGAC 58.420 61.111 0.00 0.00 39.62 3.01
2085 2559 0.821711 AGGAGAAGAGGGAGATCGCG 60.822 60.000 0.00 0.00 0.00 5.87
2087 2561 4.081420 TCAAAAAGGAGAAGAGGGAGATCG 60.081 45.833 0.00 0.00 0.00 3.69
2089 2563 4.849235 AGTCAAAAAGGAGAAGAGGGAGAT 59.151 41.667 0.00 0.00 0.00 2.75
2095 2569 4.068599 GTGGGAGTCAAAAAGGAGAAGAG 58.931 47.826 0.00 0.00 0.00 2.85
2096 2570 3.494398 CGTGGGAGTCAAAAAGGAGAAGA 60.494 47.826 0.00 0.00 0.00 2.87
2097 2571 2.808543 CGTGGGAGTCAAAAAGGAGAAG 59.191 50.000 0.00 0.00 0.00 2.85
2106 2648 1.301401 CGAAGCCGTGGGAGTCAAA 60.301 57.895 0.00 0.00 0.00 2.69
2120 2662 2.856032 CAGGTGAGCAACGCGAAG 59.144 61.111 15.93 5.50 0.00 3.79
2130 2675 3.190849 CCGATGCGTGCAGGTGAG 61.191 66.667 8.40 0.00 0.00 3.51
2158 2703 2.110006 GAGGGCGAGCAGGGATTC 59.890 66.667 0.00 0.00 0.00 2.52
2159 2704 3.854669 CGAGGGCGAGCAGGGATT 61.855 66.667 0.00 0.00 40.82 3.01
2255 2810 3.497932 CGAGAAGCTGCTGCAGGC 61.498 66.667 29.05 20.79 42.74 4.85
2275 2830 4.077184 CGGTTAGGGTGCAGGCGA 62.077 66.667 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.