Multiple sequence alignment - TraesCS2A01G437700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G437700 chr2A 100.000 4766 0 0 1 4766 689203357 689208122 0.000000e+00 8802.0
1 TraesCS2A01G437700 chr2A 91.845 466 35 3 1457 1920 669437805 669437341 0.000000e+00 647.0
2 TraesCS2A01G437700 chr2A 100.000 42 0 0 884 925 689204197 689204238 1.420000e-10 78.7
3 TraesCS2A01G437700 chr2A 100.000 42 0 0 841 882 689204240 689204281 1.420000e-10 78.7
4 TraesCS2A01G437700 chr2A 94.444 36 1 1 1207 1242 102903301 102903267 2.000000e-03 54.7
5 TraesCS2A01G437700 chr2D 95.328 2868 91 29 1915 4766 545850483 545847643 0.000000e+00 4514.0
6 TraesCS2A01G437700 chr2D 87.111 900 51 23 1 891 545851837 545850994 0.000000e+00 959.0
7 TraesCS2A01G437700 chr2D 90.678 590 24 8 884 1458 545851044 545850471 0.000000e+00 756.0
8 TraesCS2A01G437700 chr2D 94.444 36 1 1 1207 1242 106370487 106370453 2.000000e-03 54.7
9 TraesCS2A01G437700 chr2B 89.436 2906 204 63 1910 4766 652409043 652406192 0.000000e+00 3570.0
10 TraesCS2A01G437700 chr2B 89.943 527 30 10 26 542 652410401 652409888 0.000000e+00 658.0
11 TraesCS2A01G437700 chr2B 91.006 467 36 4 1458 1920 592767114 592767578 4.050000e-175 625.0
12 TraesCS2A01G437700 chr2B 83.051 472 32 15 884 1337 652409592 652409151 7.480000e-103 385.0
13 TraesCS2A01G437700 chr2B 85.714 245 17 10 653 891 652409774 652409542 4.770000e-60 243.0
14 TraesCS2A01G437700 chr2B 94.444 36 1 1 1207 1242 155047514 155047480 2.000000e-03 54.7
15 TraesCS2A01G437700 chr1A 95.096 469 17 2 1458 1920 10176443 10176911 0.000000e+00 734.0
16 TraesCS2A01G437700 chr7A 93.319 464 30 1 1457 1920 628833915 628833453 0.000000e+00 684.0
17 TraesCS2A01G437700 chr7A 92.424 462 35 0 1459 1920 536498922 536498461 0.000000e+00 660.0
18 TraesCS2A01G437700 chr7A 88.298 470 46 7 1457 1923 135570480 135570017 5.390000e-154 555.0
19 TraesCS2A01G437700 chr4B 93.103 464 29 3 1458 1920 8623212 8623673 0.000000e+00 676.0
20 TraesCS2A01G437700 chr6A 93.008 472 18 6 1467 1923 29956555 29956084 0.000000e+00 675.0
21 TraesCS2A01G437700 chr3A 92.258 465 35 1 1457 1920 12801882 12802346 0.000000e+00 658.0
22 TraesCS2A01G437700 chr6D 97.590 83 2 0 3094 3176 418481737 418481819 4.970000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G437700 chr2A 689203357 689208122 4765 False 2986.466667 8802 100.000 1 4766 3 chr2A.!!$F1 4765
1 TraesCS2A01G437700 chr2D 545847643 545851837 4194 True 2076.333333 4514 91.039 1 4766 3 chr2D.!!$R2 4765
2 TraesCS2A01G437700 chr2B 652406192 652410401 4209 True 1214.000000 3570 87.036 26 4766 4 chr2B.!!$R2 4740

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
893 934 0.108804 CGAATCCTACACGTGCAGGT 60.109 55.0 29.64 15.24 33.37 4.00 F
1446 1514 0.038166 AATGATGACAACCGGCACCT 59.962 50.0 0.00 0.00 0.00 4.00 F
1901 1969 0.035630 GAAGCACTGGACCTGAGCAT 60.036 55.0 19.94 10.34 0.00 3.79 F
1904 1972 0.035630 GCACTGGACCTGAGCATCTT 60.036 55.0 14.45 0.00 34.92 2.40 F
2260 2347 0.109532 TGTCCCATTGTCGGCTGAAA 59.890 50.0 0.00 0.00 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1882 1950 0.035630 ATGCTCAGGTCCAGTGCTTC 60.036 55.000 9.40 0.0 0.00 3.86 R
2835 2933 0.179129 CAATGGCCGCATCAAGGAAC 60.179 55.000 0.00 0.0 0.00 3.62 R
2886 2984 1.471684 CCGTATGCCGAGTATAGGGTC 59.528 57.143 10.41 0.0 39.56 4.46 R
2898 2996 1.654023 GCCCACTTGAACCGTATGCC 61.654 60.000 0.00 0.0 0.00 4.40 R
3873 3985 3.809905 CCTGAACCTAGGTAAATCTGGC 58.190 50.000 16.67 0.0 32.99 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.600012 CCTGAGCCGTTAATTGTACAAG 57.400 45.455 14.65 0.16 0.00 3.16
83 88 5.699915 CCTATGCATACTTCTGTTCTCCATG 59.300 44.000 1.16 0.00 0.00 3.66
102 107 7.449395 TCTCCATGAAGAACATTTCTCACAAAT 59.551 33.333 0.00 0.00 39.61 2.32
132 137 4.718940 ATTTGTCCCGGATTTTCATCAC 57.281 40.909 0.73 0.00 0.00 3.06
272 277 0.738975 CCGGACTCGCTATGTGAAGA 59.261 55.000 0.00 0.00 34.56 2.87
318 323 2.920912 ACATGTCCCCGTCGGTGT 60.921 61.111 11.06 4.50 0.00 4.16
348 353 2.280457 GCCCACTGCTATCGCTCC 60.280 66.667 0.00 0.00 36.87 4.70
460 469 5.130292 TCTTCACGAACTGTAGGTTAAGG 57.870 43.478 0.00 0.00 38.41 2.69
478 487 3.876274 AGGACTGCATGTACTACTGTG 57.124 47.619 0.00 0.00 38.27 3.66
562 571 2.634453 TCATGTGTTTGGAGCTCTGAGA 59.366 45.455 14.64 0.00 0.00 3.27
563 572 3.262660 TCATGTGTTTGGAGCTCTGAGAT 59.737 43.478 14.64 0.55 0.00 2.75
564 573 3.777106 TGTGTTTGGAGCTCTGAGATT 57.223 42.857 14.64 0.00 0.00 2.40
565 574 4.890158 TGTGTTTGGAGCTCTGAGATTA 57.110 40.909 14.64 0.00 0.00 1.75
566 575 5.426689 TGTGTTTGGAGCTCTGAGATTAT 57.573 39.130 14.64 0.00 0.00 1.28
567 576 5.809001 TGTGTTTGGAGCTCTGAGATTATT 58.191 37.500 14.64 0.00 0.00 1.40
568 577 6.240894 TGTGTTTGGAGCTCTGAGATTATTT 58.759 36.000 14.64 0.00 0.00 1.40
569 578 6.716628 TGTGTTTGGAGCTCTGAGATTATTTT 59.283 34.615 14.64 0.00 0.00 1.82
570 579 7.094634 TGTGTTTGGAGCTCTGAGATTATTTTC 60.095 37.037 14.64 0.00 0.00 2.29
571 580 6.942005 TGTTTGGAGCTCTGAGATTATTTTCA 59.058 34.615 14.64 0.00 0.00 2.69
572 581 6.992063 TTGGAGCTCTGAGATTATTTTCAC 57.008 37.500 14.64 0.00 0.00 3.18
573 582 6.305272 TGGAGCTCTGAGATTATTTTCACT 57.695 37.500 14.64 0.00 0.00 3.41
574 583 6.344500 TGGAGCTCTGAGATTATTTTCACTC 58.656 40.000 14.64 1.30 0.00 3.51
575 584 5.461737 GGAGCTCTGAGATTATTTTCACTCG 59.538 44.000 14.64 0.00 32.81 4.18
576 585 5.971763 AGCTCTGAGATTATTTTCACTCGT 58.028 37.500 9.28 0.00 32.81 4.18
577 586 5.809562 AGCTCTGAGATTATTTTCACTCGTG 59.190 40.000 9.28 0.00 32.81 4.35
578 587 5.807520 GCTCTGAGATTATTTTCACTCGTGA 59.192 40.000 9.28 0.00 37.91 4.35
586 595 9.334947 AGATTATTTTCACTCGTGATGATGAAT 57.665 29.630 0.00 0.00 39.64 2.57
594 603 3.829026 CTCGTGATGATGAATCCTCCCTA 59.171 47.826 0.00 0.00 34.00 3.53
613 622 3.199946 CCTACCCTGTTTCAGCTCCATTA 59.800 47.826 0.00 0.00 0.00 1.90
614 623 3.806949 ACCCTGTTTCAGCTCCATTAA 57.193 42.857 0.00 0.00 0.00 1.40
615 624 4.322057 ACCCTGTTTCAGCTCCATTAAT 57.678 40.909 0.00 0.00 0.00 1.40
616 625 4.677182 ACCCTGTTTCAGCTCCATTAATT 58.323 39.130 0.00 0.00 0.00 1.40
628 637 4.703897 CTCCATTAATTCGCCCTCTGTAA 58.296 43.478 0.00 0.00 0.00 2.41
629 638 4.448210 TCCATTAATTCGCCCTCTGTAAC 58.552 43.478 0.00 0.00 0.00 2.50
630 639 4.080807 TCCATTAATTCGCCCTCTGTAACA 60.081 41.667 0.00 0.00 0.00 2.41
694 729 5.878669 TCAGAAATCATCCATCTCTGTGTTG 59.121 40.000 0.00 0.00 35.93 3.33
730 768 4.742201 CAGTGACCACGGGAGGCG 62.742 72.222 0.00 0.00 36.20 5.52
822 863 4.622456 GCAAACGTGTGGTGGCGG 62.622 66.667 8.05 0.00 0.00 6.13
858 899 2.741092 ACGTGCAGGTCCGTGATT 59.259 55.556 6.15 0.00 35.69 2.57
859 900 1.667830 ACGTGCAGGTCCGTGATTG 60.668 57.895 6.15 0.00 35.69 2.67
860 901 2.390599 CGTGCAGGTCCGTGATTGG 61.391 63.158 0.00 0.00 0.00 3.16
861 902 2.359850 TGCAGGTCCGTGATTGGC 60.360 61.111 0.00 0.00 0.00 4.52
862 903 2.045926 GCAGGTCCGTGATTGGCT 60.046 61.111 0.00 0.00 0.00 4.75
863 904 2.401766 GCAGGTCCGTGATTGGCTG 61.402 63.158 0.00 0.00 0.00 4.85
864 905 2.045926 AGGTCCGTGATTGGCTGC 60.046 61.111 0.00 0.00 0.00 5.25
865 906 3.134127 GGTCCGTGATTGGCTGCC 61.134 66.667 12.87 12.87 0.00 4.85
866 907 2.045926 GTCCGTGATTGGCTGCCT 60.046 61.111 21.03 0.00 0.00 4.75
867 908 1.675641 GTCCGTGATTGGCTGCCTT 60.676 57.895 21.03 7.36 0.00 4.35
868 909 0.392461 GTCCGTGATTGGCTGCCTTA 60.392 55.000 21.03 8.41 0.00 2.69
869 910 0.546122 TCCGTGATTGGCTGCCTTAT 59.454 50.000 21.03 13.08 0.00 1.73
870 911 0.947244 CCGTGATTGGCTGCCTTATC 59.053 55.000 21.03 20.64 0.00 1.75
871 912 0.947244 CGTGATTGGCTGCCTTATCC 59.053 55.000 21.03 13.88 0.00 2.59
872 913 0.947244 GTGATTGGCTGCCTTATCCG 59.053 55.000 21.03 0.00 0.00 4.18
873 914 0.819259 TGATTGGCTGCCTTATCCGC 60.819 55.000 21.03 3.07 0.00 5.54
874 915 1.518903 GATTGGCTGCCTTATCCGCC 61.519 60.000 21.03 0.00 42.78 6.13
875 916 4.545706 TGGCTGCCTTATCCGCCG 62.546 66.667 21.03 0.00 45.36 6.46
876 917 4.235762 GGCTGCCTTATCCGCCGA 62.236 66.667 12.43 0.00 32.22 5.54
877 918 2.203015 GCTGCCTTATCCGCCGAA 60.203 61.111 0.00 0.00 0.00 4.30
878 919 1.598130 GCTGCCTTATCCGCCGAAT 60.598 57.895 0.00 0.00 0.00 3.34
879 920 1.569479 GCTGCCTTATCCGCCGAATC 61.569 60.000 0.00 0.00 0.00 2.52
880 921 0.951040 CTGCCTTATCCGCCGAATCC 60.951 60.000 0.00 0.00 0.00 3.01
881 922 1.371558 GCCTTATCCGCCGAATCCT 59.628 57.895 0.00 0.00 0.00 3.24
882 923 0.606604 GCCTTATCCGCCGAATCCTA 59.393 55.000 0.00 0.00 0.00 2.94
883 924 1.672145 GCCTTATCCGCCGAATCCTAC 60.672 57.143 0.00 0.00 0.00 3.18
884 925 1.616865 CCTTATCCGCCGAATCCTACA 59.383 52.381 0.00 0.00 0.00 2.74
885 926 2.609737 CCTTATCCGCCGAATCCTACAC 60.610 54.545 0.00 0.00 0.00 2.90
886 927 0.594602 TATCCGCCGAATCCTACACG 59.405 55.000 0.00 0.00 0.00 4.49
887 928 1.389609 ATCCGCCGAATCCTACACGT 61.390 55.000 0.00 0.00 0.00 4.49
888 929 1.876714 CCGCCGAATCCTACACGTG 60.877 63.158 15.48 15.48 0.00 4.49
889 930 2.514013 CGCCGAATCCTACACGTGC 61.514 63.158 17.22 0.00 0.00 5.34
890 931 1.447140 GCCGAATCCTACACGTGCA 60.447 57.895 17.22 0.49 0.00 4.57
891 932 1.421410 GCCGAATCCTACACGTGCAG 61.421 60.000 17.22 12.81 0.00 4.41
892 933 0.806102 CCGAATCCTACACGTGCAGG 60.806 60.000 26.33 26.33 0.00 4.85
893 934 0.108804 CGAATCCTACACGTGCAGGT 60.109 55.000 29.64 15.24 33.37 4.00
902 943 1.667830 ACGTGCAGGTCCGTGATTG 60.668 57.895 6.15 0.00 35.69 2.67
934 975 2.109799 CGAATCCTCCCGCTGCAT 59.890 61.111 0.00 0.00 0.00 3.96
935 976 2.249535 CGAATCCTCCCGCTGCATG 61.250 63.158 0.00 0.00 0.00 4.06
936 977 2.517875 AATCCTCCCGCTGCATGC 60.518 61.111 11.82 11.82 38.57 4.06
937 978 4.575973 ATCCTCCCGCTGCATGCC 62.576 66.667 16.68 0.00 38.78 4.40
941 982 4.488136 TCCCGCTGCATGCCGAAT 62.488 61.111 16.68 0.00 38.78 3.34
1016 1057 3.060663 GCGAGCGCTCAAGTCGAAC 62.061 63.158 34.69 7.57 35.70 3.95
1052 1093 3.453679 GGCGCGACCTTCCTCTCT 61.454 66.667 12.10 0.00 34.51 3.10
1127 1177 1.597663 GCACACGTATGTATGCTTCCC 59.402 52.381 11.12 0.00 36.72 3.97
1133 1183 3.069016 ACGTATGTATGCTTCCCGATTCA 59.931 43.478 0.00 0.00 0.00 2.57
1137 1187 2.158957 TGTATGCTTCCCGATTCAGACC 60.159 50.000 0.00 0.00 0.00 3.85
1151 1201 3.519930 GACCGCGAGTCCCCTCTC 61.520 72.222 8.23 0.00 39.84 3.20
1152 1202 4.361971 ACCGCGAGTCCCCTCTCA 62.362 66.667 8.23 0.00 35.43 3.27
1155 1205 2.107953 GCGAGTCCCCTCTCATGC 59.892 66.667 0.00 0.00 35.43 4.06
1157 1207 1.109920 GCGAGTCCCCTCTCATGCTA 61.110 60.000 0.00 0.00 35.43 3.49
1158 1208 1.403814 CGAGTCCCCTCTCATGCTAA 58.596 55.000 0.00 0.00 35.43 3.09
1159 1209 1.339610 CGAGTCCCCTCTCATGCTAAG 59.660 57.143 0.00 0.00 35.43 2.18
1160 1210 2.393646 GAGTCCCCTCTCATGCTAAGT 58.606 52.381 0.00 0.00 34.69 2.24
1161 1211 2.769095 GAGTCCCCTCTCATGCTAAGTT 59.231 50.000 0.00 0.00 34.69 2.66
1162 1212 3.961408 GAGTCCCCTCTCATGCTAAGTTA 59.039 47.826 0.00 0.00 34.69 2.24
1163 1213 4.362677 AGTCCCCTCTCATGCTAAGTTAA 58.637 43.478 0.00 0.00 0.00 2.01
1164 1214 4.162509 AGTCCCCTCTCATGCTAAGTTAAC 59.837 45.833 0.00 0.00 0.00 2.01
1204 1268 3.677648 GTGTGCTGCCAGGCCAAG 61.678 66.667 9.64 0.87 0.00 3.61
1205 1269 4.208403 TGTGCTGCCAGGCCAAGT 62.208 61.111 9.64 0.00 0.00 3.16
1256 1320 4.443266 GCGAAGAGGCTCTGCGGT 62.443 66.667 38.29 16.19 45.51 5.68
1435 1503 5.461526 CATGCATGATGGAAGAATGATGAC 58.538 41.667 22.59 0.00 0.00 3.06
1440 1508 3.940852 TGATGGAAGAATGATGACAACCG 59.059 43.478 0.00 0.00 0.00 4.44
1446 1514 0.038166 AATGATGACAACCGGCACCT 59.962 50.000 0.00 0.00 0.00 4.00
1448 1516 1.745489 GATGACAACCGGCACCTCC 60.745 63.158 0.00 0.00 0.00 4.30
1449 1517 2.463589 GATGACAACCGGCACCTCCA 62.464 60.000 0.00 0.00 34.01 3.86
1450 1518 1.852157 ATGACAACCGGCACCTCCAT 61.852 55.000 0.00 0.00 34.01 3.41
1451 1519 2.034066 ACAACCGGCACCTCCATG 59.966 61.111 0.00 0.00 34.01 3.66
1452 1520 2.751436 CAACCGGCACCTCCATGG 60.751 66.667 4.97 4.97 42.93 3.66
1456 1524 2.361610 CGGCACCTCCATGGCTTT 60.362 61.111 6.96 0.00 42.81 3.51
1457 1525 1.978617 CGGCACCTCCATGGCTTTT 60.979 57.895 6.96 0.00 42.81 2.27
1458 1526 1.535204 CGGCACCTCCATGGCTTTTT 61.535 55.000 6.96 0.00 42.81 1.94
1478 1546 3.209091 TTTTTGAACCGGGCCTCAA 57.791 47.368 6.32 9.15 0.00 3.02
1479 1547 0.747852 TTTTTGAACCGGGCCTCAAC 59.252 50.000 6.32 0.00 31.41 3.18
1480 1548 1.110518 TTTTGAACCGGGCCTCAACC 61.111 55.000 6.32 0.00 31.41 3.77
1487 1555 2.037367 GGGCCTCAACCCCTTTCC 59.963 66.667 0.84 0.00 45.00 3.13
1488 1556 2.851045 GGCCTCAACCCCTTTCCA 59.149 61.111 0.00 0.00 0.00 3.53
1489 1557 1.388133 GGCCTCAACCCCTTTCCAT 59.612 57.895 0.00 0.00 0.00 3.41
1490 1558 0.252239 GGCCTCAACCCCTTTCCATT 60.252 55.000 0.00 0.00 0.00 3.16
1491 1559 1.006639 GGCCTCAACCCCTTTCCATTA 59.993 52.381 0.00 0.00 0.00 1.90
1492 1560 2.558800 GGCCTCAACCCCTTTCCATTAA 60.559 50.000 0.00 0.00 0.00 1.40
1493 1561 3.169908 GCCTCAACCCCTTTCCATTAAA 58.830 45.455 0.00 0.00 0.00 1.52
1494 1562 3.580895 GCCTCAACCCCTTTCCATTAAAA 59.419 43.478 0.00 0.00 0.00 1.52
1495 1563 4.322725 GCCTCAACCCCTTTCCATTAAAAG 60.323 45.833 0.00 0.00 36.26 2.27
1496 1564 4.322725 CCTCAACCCCTTTCCATTAAAAGC 60.323 45.833 0.00 0.00 35.37 3.51
1497 1565 4.227197 TCAACCCCTTTCCATTAAAAGCA 58.773 39.130 0.00 0.00 35.37 3.91
1498 1566 4.843516 TCAACCCCTTTCCATTAAAAGCAT 59.156 37.500 0.00 0.00 35.37 3.79
1499 1567 6.019748 TCAACCCCTTTCCATTAAAAGCATA 58.980 36.000 0.00 0.00 35.37 3.14
1500 1568 6.498651 TCAACCCCTTTCCATTAAAAGCATAA 59.501 34.615 0.00 0.00 35.37 1.90
1501 1569 6.294361 ACCCCTTTCCATTAAAAGCATAAC 57.706 37.500 0.00 0.00 35.37 1.89
1502 1570 5.105513 ACCCCTTTCCATTAAAAGCATAACG 60.106 40.000 0.00 0.00 35.37 3.18
1503 1571 5.348164 CCCTTTCCATTAAAAGCATAACGG 58.652 41.667 0.00 0.00 35.37 4.44
1504 1572 5.126384 CCCTTTCCATTAAAAGCATAACGGA 59.874 40.000 0.00 0.00 35.37 4.69
1505 1573 6.350612 CCCTTTCCATTAAAAGCATAACGGAA 60.351 38.462 1.79 1.79 35.85 4.30
1506 1574 7.093992 CCTTTCCATTAAAAGCATAACGGAAA 58.906 34.615 13.13 13.13 41.95 3.13
1507 1575 7.763985 CCTTTCCATTAAAAGCATAACGGAAAT 59.236 33.333 13.78 0.00 42.72 2.17
1508 1576 9.796120 CTTTCCATTAAAAGCATAACGGAAATA 57.204 29.630 13.78 0.00 42.72 1.40
1509 1577 9.575783 TTTCCATTAAAAGCATAACGGAAATAC 57.424 29.630 10.98 0.00 40.34 1.89
1510 1578 8.282455 TCCATTAAAAGCATAACGGAAATACA 57.718 30.769 0.00 0.00 25.03 2.29
1511 1579 8.908903 TCCATTAAAAGCATAACGGAAATACAT 58.091 29.630 0.00 0.00 25.03 2.29
1517 1585 8.500753 AAAGCATAACGGAAATACATACTTCA 57.499 30.769 0.00 0.00 0.00 3.02
1518 1586 7.715265 AGCATAACGGAAATACATACTTCAG 57.285 36.000 0.00 0.00 0.00 3.02
1519 1587 7.497595 AGCATAACGGAAATACATACTTCAGA 58.502 34.615 0.00 0.00 0.00 3.27
1520 1588 7.653713 AGCATAACGGAAATACATACTTCAGAG 59.346 37.037 0.00 0.00 0.00 3.35
1521 1589 7.652105 GCATAACGGAAATACATACTTCAGAGA 59.348 37.037 0.00 0.00 0.00 3.10
1522 1590 9.529325 CATAACGGAAATACATACTTCAGAGAA 57.471 33.333 0.00 0.00 0.00 2.87
1523 1591 7.829378 AACGGAAATACATACTTCAGAGAAC 57.171 36.000 0.00 0.00 0.00 3.01
1524 1592 6.338937 ACGGAAATACATACTTCAGAGAACC 58.661 40.000 0.00 0.00 0.00 3.62
1525 1593 6.070995 ACGGAAATACATACTTCAGAGAACCA 60.071 38.462 0.00 0.00 0.00 3.67
1526 1594 6.255887 CGGAAATACATACTTCAGAGAACCAC 59.744 42.308 0.00 0.00 0.00 4.16
1527 1595 7.103641 GGAAATACATACTTCAGAGAACCACA 58.896 38.462 0.00 0.00 0.00 4.17
1528 1596 7.278868 GGAAATACATACTTCAGAGAACCACAG 59.721 40.741 0.00 0.00 0.00 3.66
1529 1597 7.482169 AATACATACTTCAGAGAACCACAGA 57.518 36.000 0.00 0.00 0.00 3.41
1530 1598 5.140747 ACATACTTCAGAGAACCACAGAC 57.859 43.478 0.00 0.00 0.00 3.51
1531 1599 4.021016 ACATACTTCAGAGAACCACAGACC 60.021 45.833 0.00 0.00 0.00 3.85
1532 1600 1.694696 ACTTCAGAGAACCACAGACCC 59.305 52.381 0.00 0.00 0.00 4.46
1533 1601 1.694150 CTTCAGAGAACCACAGACCCA 59.306 52.381 0.00 0.00 0.00 4.51
1534 1602 1.801242 TCAGAGAACCACAGACCCAA 58.199 50.000 0.00 0.00 0.00 4.12
1535 1603 1.694150 TCAGAGAACCACAGACCCAAG 59.306 52.381 0.00 0.00 0.00 3.61
1536 1604 1.694150 CAGAGAACCACAGACCCAAGA 59.306 52.381 0.00 0.00 0.00 3.02
1537 1605 2.104792 CAGAGAACCACAGACCCAAGAA 59.895 50.000 0.00 0.00 0.00 2.52
1538 1606 2.104963 AGAGAACCACAGACCCAAGAAC 59.895 50.000 0.00 0.00 0.00 3.01
1539 1607 1.143073 AGAACCACAGACCCAAGAACC 59.857 52.381 0.00 0.00 0.00 3.62
1540 1608 0.923358 AACCACAGACCCAAGAACCA 59.077 50.000 0.00 0.00 0.00 3.67
1541 1609 0.923358 ACCACAGACCCAAGAACCAA 59.077 50.000 0.00 0.00 0.00 3.67
1542 1610 1.286553 ACCACAGACCCAAGAACCAAA 59.713 47.619 0.00 0.00 0.00 3.28
1543 1611 2.091333 ACCACAGACCCAAGAACCAAAT 60.091 45.455 0.00 0.00 0.00 2.32
1544 1612 2.965147 CCACAGACCCAAGAACCAAATT 59.035 45.455 0.00 0.00 0.00 1.82
1545 1613 3.005791 CCACAGACCCAAGAACCAAATTC 59.994 47.826 0.00 0.00 37.62 2.17
1546 1614 3.636300 CACAGACCCAAGAACCAAATTCA 59.364 43.478 0.00 0.00 40.09 2.57
1547 1615 3.891366 ACAGACCCAAGAACCAAATTCAG 59.109 43.478 0.00 0.00 40.09 3.02
1548 1616 2.893489 AGACCCAAGAACCAAATTCAGC 59.107 45.455 0.00 0.00 40.09 4.26
1549 1617 2.627699 GACCCAAGAACCAAATTCAGCA 59.372 45.455 0.00 0.00 40.09 4.41
1550 1618 3.242011 ACCCAAGAACCAAATTCAGCAT 58.758 40.909 0.00 0.00 40.09 3.79
1551 1619 4.415596 ACCCAAGAACCAAATTCAGCATA 58.584 39.130 0.00 0.00 40.09 3.14
1552 1620 4.837860 ACCCAAGAACCAAATTCAGCATAA 59.162 37.500 0.00 0.00 40.09 1.90
1553 1621 5.047092 ACCCAAGAACCAAATTCAGCATAAG 60.047 40.000 0.00 0.00 40.09 1.73
1554 1622 5.413499 CCAAGAACCAAATTCAGCATAAGG 58.587 41.667 0.00 0.00 40.09 2.69
1555 1623 5.185635 CCAAGAACCAAATTCAGCATAAGGA 59.814 40.000 0.00 0.00 40.09 3.36
1556 1624 6.295236 CCAAGAACCAAATTCAGCATAAGGAA 60.295 38.462 0.00 0.00 40.09 3.36
1557 1625 6.916360 AGAACCAAATTCAGCATAAGGAAA 57.084 33.333 0.00 0.00 40.09 3.13
1558 1626 6.691508 AGAACCAAATTCAGCATAAGGAAAC 58.308 36.000 0.00 0.00 40.09 2.78
1559 1627 6.494835 AGAACCAAATTCAGCATAAGGAAACT 59.505 34.615 0.00 0.00 40.95 2.66
1560 1628 7.669722 AGAACCAAATTCAGCATAAGGAAACTA 59.330 33.333 0.00 0.00 38.99 2.24
1561 1629 7.396540 ACCAAATTCAGCATAAGGAAACTAG 57.603 36.000 0.00 0.00 42.68 2.57
1562 1630 7.175104 ACCAAATTCAGCATAAGGAAACTAGA 58.825 34.615 0.00 0.00 42.68 2.43
1563 1631 7.669722 ACCAAATTCAGCATAAGGAAACTAGAA 59.330 33.333 0.00 0.00 42.68 2.10
1564 1632 8.522830 CCAAATTCAGCATAAGGAAACTAGAAA 58.477 33.333 0.00 0.00 42.68 2.52
1565 1633 9.565213 CAAATTCAGCATAAGGAAACTAGAAAG 57.435 33.333 0.00 0.00 42.68 2.62
1566 1634 7.872113 ATTCAGCATAAGGAAACTAGAAAGG 57.128 36.000 0.00 0.00 42.68 3.11
1567 1635 6.374417 TCAGCATAAGGAAACTAGAAAGGT 57.626 37.500 0.00 0.00 42.68 3.50
1568 1636 6.173339 TCAGCATAAGGAAACTAGAAAGGTG 58.827 40.000 0.00 0.00 42.68 4.00
1569 1637 5.355350 CAGCATAAGGAAACTAGAAAGGTGG 59.645 44.000 0.00 0.00 42.68 4.61
1570 1638 4.640647 GCATAAGGAAACTAGAAAGGTGGG 59.359 45.833 0.00 0.00 42.68 4.61
1571 1639 3.808834 AAGGAAACTAGAAAGGTGGGG 57.191 47.619 0.00 0.00 42.68 4.96
1572 1640 1.354705 AGGAAACTAGAAAGGTGGGGC 59.645 52.381 0.00 0.00 40.61 5.80
1573 1641 1.450025 GAAACTAGAAAGGTGGGGCG 58.550 55.000 0.00 0.00 0.00 6.13
1574 1642 1.002773 GAAACTAGAAAGGTGGGGCGA 59.997 52.381 0.00 0.00 0.00 5.54
1575 1643 0.613777 AACTAGAAAGGTGGGGCGAG 59.386 55.000 0.00 0.00 0.00 5.03
1576 1644 0.544595 ACTAGAAAGGTGGGGCGAGT 60.545 55.000 0.00 0.00 0.00 4.18
1577 1645 0.613777 CTAGAAAGGTGGGGCGAGTT 59.386 55.000 0.00 0.00 0.00 3.01
1578 1646 0.611714 TAGAAAGGTGGGGCGAGTTC 59.388 55.000 0.00 0.00 0.00 3.01
1579 1647 1.072505 GAAAGGTGGGGCGAGTTCA 59.927 57.895 0.00 0.00 0.00 3.18
1580 1648 0.536460 GAAAGGTGGGGCGAGTTCAA 60.536 55.000 0.00 0.00 0.00 2.69
1581 1649 0.537371 AAAGGTGGGGCGAGTTCAAG 60.537 55.000 0.00 0.00 0.00 3.02
1582 1650 2.359975 GGTGGGGCGAGTTCAAGG 60.360 66.667 0.00 0.00 0.00 3.61
1583 1651 3.056328 GTGGGGCGAGTTCAAGGC 61.056 66.667 0.00 0.00 0.00 4.35
1584 1652 3.565214 TGGGGCGAGTTCAAGGCA 61.565 61.111 0.00 0.00 34.32 4.75
1585 1653 3.056328 GGGGCGAGTTCAAGGCAC 61.056 66.667 0.00 0.00 34.32 5.01
1586 1654 3.056328 GGGCGAGTTCAAGGCACC 61.056 66.667 0.00 0.00 34.32 5.01
1587 1655 2.281484 GGCGAGTTCAAGGCACCA 60.281 61.111 0.00 0.00 0.00 4.17
1588 1656 2.328099 GGCGAGTTCAAGGCACCAG 61.328 63.158 0.00 0.00 0.00 4.00
1589 1657 1.598130 GCGAGTTCAAGGCACCAGT 60.598 57.895 0.00 0.00 0.00 4.00
1590 1658 0.320421 GCGAGTTCAAGGCACCAGTA 60.320 55.000 0.00 0.00 0.00 2.74
1591 1659 1.714794 CGAGTTCAAGGCACCAGTAG 58.285 55.000 0.00 0.00 0.00 2.57
1592 1660 1.673033 CGAGTTCAAGGCACCAGTAGG 60.673 57.143 0.00 0.00 42.21 3.18
1593 1661 1.623811 GAGTTCAAGGCACCAGTAGGA 59.376 52.381 0.00 0.00 38.69 2.94
1594 1662 2.038557 GAGTTCAAGGCACCAGTAGGAA 59.961 50.000 0.00 0.00 38.69 3.36
1595 1663 2.441750 AGTTCAAGGCACCAGTAGGAAA 59.558 45.455 0.00 0.00 38.69 3.13
1596 1664 2.552743 GTTCAAGGCACCAGTAGGAAAC 59.447 50.000 0.00 0.00 38.69 2.78
1597 1665 1.073284 TCAAGGCACCAGTAGGAAACC 59.927 52.381 0.00 0.00 38.69 3.27
1598 1666 0.404426 AAGGCACCAGTAGGAAACCC 59.596 55.000 0.00 0.00 38.69 4.11
1599 1667 0.770557 AGGCACCAGTAGGAAACCCA 60.771 55.000 0.00 0.00 38.69 4.51
1600 1668 0.608308 GGCACCAGTAGGAAACCCAC 60.608 60.000 0.00 0.00 38.69 4.61
1601 1669 0.608308 GCACCAGTAGGAAACCCACC 60.608 60.000 0.00 0.00 38.69 4.61
1602 1670 0.768622 CACCAGTAGGAAACCCACCA 59.231 55.000 0.00 0.00 38.69 4.17
1603 1671 1.354368 CACCAGTAGGAAACCCACCAT 59.646 52.381 0.00 0.00 38.69 3.55
1604 1672 1.354368 ACCAGTAGGAAACCCACCATG 59.646 52.381 0.00 0.00 38.69 3.66
1605 1673 1.633432 CCAGTAGGAAACCCACCATGA 59.367 52.381 0.00 0.00 36.89 3.07
1606 1674 2.356125 CCAGTAGGAAACCCACCATGAG 60.356 54.545 0.00 0.00 36.89 2.90
1607 1675 1.282157 AGTAGGAAACCCACCATGAGC 59.718 52.381 0.00 0.00 0.00 4.26
1608 1676 1.004277 GTAGGAAACCCACCATGAGCA 59.996 52.381 0.00 0.00 0.00 4.26
1609 1677 0.251341 AGGAAACCCACCATGAGCAC 60.251 55.000 0.00 0.00 0.00 4.40
1610 1678 0.251341 GGAAACCCACCATGAGCACT 60.251 55.000 0.00 0.00 0.00 4.40
1611 1679 1.168714 GAAACCCACCATGAGCACTC 58.831 55.000 0.00 0.00 0.00 3.51
1612 1680 0.606401 AAACCCACCATGAGCACTCG 60.606 55.000 0.00 0.00 0.00 4.18
1613 1681 1.768684 AACCCACCATGAGCACTCGT 61.769 55.000 0.00 0.00 0.00 4.18
1614 1682 1.448540 CCCACCATGAGCACTCGTC 60.449 63.158 0.00 0.00 0.00 4.20
1615 1683 1.293179 CCACCATGAGCACTCGTCA 59.707 57.895 0.00 0.00 0.00 4.35
1616 1684 0.107993 CCACCATGAGCACTCGTCAT 60.108 55.000 0.00 0.00 34.88 3.06
1617 1685 1.284657 CACCATGAGCACTCGTCATC 58.715 55.000 0.00 0.00 32.06 2.92
1618 1686 0.179127 ACCATGAGCACTCGTCATCG 60.179 55.000 0.00 0.00 32.06 3.84
1619 1687 0.101219 CCATGAGCACTCGTCATCGA 59.899 55.000 0.00 0.00 44.12 3.59
1627 1695 3.590824 TCGTCATCGAGCAGCTCA 58.409 55.556 22.49 9.85 41.35 4.26
1628 1696 2.110296 TCGTCATCGAGCAGCTCAT 58.890 52.632 22.49 11.67 41.35 2.90
1629 1697 0.457443 TCGTCATCGAGCAGCTCATT 59.543 50.000 22.49 5.75 41.35 2.57
1630 1698 0.575859 CGTCATCGAGCAGCTCATTG 59.424 55.000 22.49 17.35 39.71 2.82
1631 1699 0.304098 GTCATCGAGCAGCTCATTGC 59.696 55.000 22.49 10.59 44.41 3.56
1640 1708 3.439540 GCTCATTGCGGGGCGAAA 61.440 61.111 0.00 0.00 0.00 3.46
1641 1709 2.988688 GCTCATTGCGGGGCGAAAA 61.989 57.895 0.00 0.00 0.00 2.29
1642 1710 1.154035 CTCATTGCGGGGCGAAAAC 60.154 57.895 0.00 0.00 0.00 2.43
1643 1711 2.126110 CATTGCGGGGCGAAAACC 60.126 61.111 0.00 0.00 0.00 3.27
1651 1719 2.975799 GGCGAAAACCCAGCGACA 60.976 61.111 0.00 0.00 32.27 4.35
1652 1720 2.251371 GCGAAAACCCAGCGACAC 59.749 61.111 0.00 0.00 0.00 3.67
1653 1721 2.943653 CGAAAACCCAGCGACACC 59.056 61.111 0.00 0.00 0.00 4.16
1654 1722 1.597027 CGAAAACCCAGCGACACCT 60.597 57.895 0.00 0.00 0.00 4.00
1655 1723 1.841663 CGAAAACCCAGCGACACCTG 61.842 60.000 0.00 0.00 0.00 4.00
1656 1724 0.818040 GAAAACCCAGCGACACCTGT 60.818 55.000 0.00 0.00 0.00 4.00
1657 1725 1.101049 AAAACCCAGCGACACCTGTG 61.101 55.000 0.00 0.00 0.00 3.66
1658 1726 1.978455 AAACCCAGCGACACCTGTGA 61.978 55.000 3.94 0.00 0.00 3.58
1659 1727 1.768684 AACCCAGCGACACCTGTGAT 61.769 55.000 3.94 0.00 0.00 3.06
1660 1728 1.448540 CCCAGCGACACCTGTGATC 60.449 63.158 3.94 0.00 0.00 2.92
1661 1729 1.293179 CCAGCGACACCTGTGATCA 59.707 57.895 3.94 0.00 0.00 2.92
1662 1730 1.016130 CCAGCGACACCTGTGATCAC 61.016 60.000 19.27 19.27 0.00 3.06
1663 1731 1.080501 AGCGACACCTGTGATCACG 60.081 57.895 20.54 14.58 0.00 4.35
1664 1732 2.730672 GCGACACCTGTGATCACGC 61.731 63.158 20.54 14.29 36.33 5.34
1665 1733 1.372872 CGACACCTGTGATCACGCA 60.373 57.895 20.54 3.59 35.17 5.24
1666 1734 0.943835 CGACACCTGTGATCACGCAA 60.944 55.000 20.54 2.77 36.06 4.85
1667 1735 0.512952 GACACCTGTGATCACGCAAC 59.487 55.000 20.54 6.59 36.06 4.17
1668 1736 0.884704 ACACCTGTGATCACGCAACC 60.885 55.000 20.54 0.00 36.06 3.77
1669 1737 0.603707 CACCTGTGATCACGCAACCT 60.604 55.000 20.54 0.00 36.06 3.50
1670 1738 0.973632 ACCTGTGATCACGCAACCTA 59.026 50.000 20.54 0.53 36.06 3.08
1671 1739 1.555075 ACCTGTGATCACGCAACCTAT 59.445 47.619 20.54 0.00 36.06 2.57
1672 1740 2.764010 ACCTGTGATCACGCAACCTATA 59.236 45.455 20.54 0.00 36.06 1.31
1673 1741 3.181475 ACCTGTGATCACGCAACCTATAG 60.181 47.826 20.54 8.91 36.06 1.31
1674 1742 3.384668 CTGTGATCACGCAACCTATAGG 58.615 50.000 20.54 17.73 36.06 2.57
1675 1743 3.028130 TGTGATCACGCAACCTATAGGA 58.972 45.455 26.01 0.73 38.94 2.94
1676 1744 3.641436 TGTGATCACGCAACCTATAGGAT 59.359 43.478 26.01 11.18 38.94 3.24
1677 1745 4.238514 GTGATCACGCAACCTATAGGATC 58.761 47.826 26.01 15.17 38.94 3.36
1678 1746 4.021894 GTGATCACGCAACCTATAGGATCT 60.022 45.833 26.01 6.39 38.94 2.75
1679 1747 5.183331 GTGATCACGCAACCTATAGGATCTA 59.817 44.000 26.01 4.32 38.94 1.98
1680 1748 5.773176 TGATCACGCAACCTATAGGATCTAA 59.227 40.000 26.01 4.84 38.94 2.10
1681 1749 6.266786 TGATCACGCAACCTATAGGATCTAAA 59.733 38.462 26.01 5.45 38.94 1.85
1682 1750 5.839621 TCACGCAACCTATAGGATCTAAAC 58.160 41.667 26.01 6.26 38.94 2.01
1683 1751 5.361571 TCACGCAACCTATAGGATCTAAACA 59.638 40.000 26.01 0.00 38.94 2.83
1684 1752 5.462398 CACGCAACCTATAGGATCTAAACAC 59.538 44.000 26.01 3.33 38.94 3.32
1685 1753 4.989168 CGCAACCTATAGGATCTAAACACC 59.011 45.833 26.01 1.05 38.94 4.16
1686 1754 5.452776 CGCAACCTATAGGATCTAAACACCA 60.453 44.000 26.01 0.00 38.94 4.17
1687 1755 6.354130 GCAACCTATAGGATCTAAACACCAA 58.646 40.000 26.01 0.00 38.94 3.67
1688 1756 6.483640 GCAACCTATAGGATCTAAACACCAAG 59.516 42.308 26.01 0.00 38.94 3.61
1689 1757 6.749036 ACCTATAGGATCTAAACACCAAGG 57.251 41.667 26.01 0.00 38.94 3.61
1690 1758 6.449956 ACCTATAGGATCTAAACACCAAGGA 58.550 40.000 26.01 0.00 38.94 3.36
1691 1759 6.555360 ACCTATAGGATCTAAACACCAAGGAG 59.445 42.308 26.01 0.00 38.94 3.69
1692 1760 6.555360 CCTATAGGATCTAAACACCAAGGAGT 59.445 42.308 14.11 0.00 37.39 3.85
1693 1761 4.828072 AGGATCTAAACACCAAGGAGTC 57.172 45.455 0.00 0.00 0.00 3.36
1694 1762 4.430441 AGGATCTAAACACCAAGGAGTCT 58.570 43.478 0.00 0.00 0.00 3.24
1695 1763 4.468153 AGGATCTAAACACCAAGGAGTCTC 59.532 45.833 0.00 0.00 0.00 3.36
1696 1764 4.383226 GGATCTAAACACCAAGGAGTCTCC 60.383 50.000 11.31 11.31 36.58 3.71
1697 1765 3.583228 TCTAAACACCAAGGAGTCTCCA 58.417 45.455 21.26 0.00 39.61 3.86
1698 1766 3.971305 TCTAAACACCAAGGAGTCTCCAA 59.029 43.478 21.26 0.00 39.61 3.53
1699 1767 3.662759 AAACACCAAGGAGTCTCCAAA 57.337 42.857 21.26 0.00 39.61 3.28
1700 1768 3.662759 AACACCAAGGAGTCTCCAAAA 57.337 42.857 21.26 0.00 39.61 2.44
1701 1769 3.214696 ACACCAAGGAGTCTCCAAAAG 57.785 47.619 21.26 8.88 39.61 2.27
1702 1770 2.158608 ACACCAAGGAGTCTCCAAAAGG 60.159 50.000 21.26 17.05 39.61 3.11
1703 1771 2.106511 CACCAAGGAGTCTCCAAAAGGA 59.893 50.000 21.26 0.00 39.61 3.36
1704 1772 2.783510 ACCAAGGAGTCTCCAAAAGGAA 59.216 45.455 21.26 0.00 39.61 3.36
1705 1773 3.149981 CCAAGGAGTCTCCAAAAGGAAC 58.850 50.000 21.26 0.00 39.61 3.62
1706 1774 3.149981 CAAGGAGTCTCCAAAAGGAACC 58.850 50.000 21.26 0.00 39.61 3.62
1707 1775 1.705745 AGGAGTCTCCAAAAGGAACCC 59.294 52.381 21.26 0.00 39.61 4.11
1708 1776 1.610886 GGAGTCTCCAAAAGGAACCCG 60.611 57.143 14.46 0.00 36.28 5.28
1709 1777 1.346722 GAGTCTCCAAAAGGAACCCGA 59.653 52.381 0.00 0.00 0.00 5.14
1710 1778 1.772453 AGTCTCCAAAAGGAACCCGAA 59.228 47.619 0.00 0.00 0.00 4.30
1711 1779 2.173996 AGTCTCCAAAAGGAACCCGAAA 59.826 45.455 0.00 0.00 0.00 3.46
1712 1780 2.292569 GTCTCCAAAAGGAACCCGAAAC 59.707 50.000 0.00 0.00 0.00 2.78
1713 1781 2.092321 TCTCCAAAAGGAACCCGAAACA 60.092 45.455 0.00 0.00 0.00 2.83
1714 1782 2.293399 CTCCAAAAGGAACCCGAAACAG 59.707 50.000 0.00 0.00 0.00 3.16
1715 1783 2.028876 CCAAAAGGAACCCGAAACAGT 58.971 47.619 0.00 0.00 0.00 3.55
1716 1784 2.034179 CCAAAAGGAACCCGAAACAGTC 59.966 50.000 0.00 0.00 0.00 3.51
1717 1785 2.949644 CAAAAGGAACCCGAAACAGTCT 59.050 45.455 0.00 0.00 0.00 3.24
1718 1786 4.131596 CAAAAGGAACCCGAAACAGTCTA 58.868 43.478 0.00 0.00 0.00 2.59
1719 1787 4.426736 AAAGGAACCCGAAACAGTCTAA 57.573 40.909 0.00 0.00 0.00 2.10
1720 1788 4.426736 AAGGAACCCGAAACAGTCTAAA 57.573 40.909 0.00 0.00 0.00 1.85
1721 1789 4.635699 AGGAACCCGAAACAGTCTAAAT 57.364 40.909 0.00 0.00 0.00 1.40
1722 1790 4.981812 AGGAACCCGAAACAGTCTAAATT 58.018 39.130 0.00 0.00 0.00 1.82
1723 1791 5.001874 AGGAACCCGAAACAGTCTAAATTC 58.998 41.667 0.00 0.00 0.00 2.17
1724 1792 4.758165 GGAACCCGAAACAGTCTAAATTCA 59.242 41.667 0.00 0.00 0.00 2.57
1725 1793 5.334646 GGAACCCGAAACAGTCTAAATTCAC 60.335 44.000 0.00 0.00 0.00 3.18
1726 1794 4.969484 ACCCGAAACAGTCTAAATTCACT 58.031 39.130 0.00 0.00 0.00 3.41
1727 1795 6.105397 ACCCGAAACAGTCTAAATTCACTA 57.895 37.500 0.00 0.00 0.00 2.74
1728 1796 6.527423 ACCCGAAACAGTCTAAATTCACTAA 58.473 36.000 0.00 0.00 0.00 2.24
1729 1797 6.649557 ACCCGAAACAGTCTAAATTCACTAAG 59.350 38.462 0.00 0.00 0.00 2.18
1730 1798 6.402226 CCCGAAACAGTCTAAATTCACTAAGC 60.402 42.308 0.00 0.00 0.00 3.09
1731 1799 6.369065 CCGAAACAGTCTAAATTCACTAAGCT 59.631 38.462 0.00 0.00 0.00 3.74
1732 1800 7.095187 CCGAAACAGTCTAAATTCACTAAGCTT 60.095 37.037 3.48 3.48 0.00 3.74
1733 1801 8.922676 CGAAACAGTCTAAATTCACTAAGCTTA 58.077 33.333 5.94 5.94 0.00 3.09
1735 1803 9.555727 AAACAGTCTAAATTCACTAAGCTTACA 57.444 29.630 0.86 0.00 0.00 2.41
1736 1804 8.764524 ACAGTCTAAATTCACTAAGCTTACAG 57.235 34.615 0.86 0.00 0.00 2.74
1737 1805 7.819900 ACAGTCTAAATTCACTAAGCTTACAGG 59.180 37.037 0.86 0.00 0.00 4.00
1738 1806 6.819146 AGTCTAAATTCACTAAGCTTACAGGC 59.181 38.462 0.86 0.00 0.00 4.85
1739 1807 6.819146 GTCTAAATTCACTAAGCTTACAGGCT 59.181 38.462 0.86 0.00 45.30 4.58
1740 1808 7.010645 GTCTAAATTCACTAAGCTTACAGGCTC 59.989 40.741 0.86 0.00 42.24 4.70
1741 1809 4.826274 ATTCACTAAGCTTACAGGCTCA 57.174 40.909 0.86 0.00 42.24 4.26
1742 1810 3.594603 TCACTAAGCTTACAGGCTCAC 57.405 47.619 0.86 0.00 42.24 3.51
1743 1811 2.897326 TCACTAAGCTTACAGGCTCACA 59.103 45.455 0.86 0.00 42.24 3.58
1744 1812 3.323691 TCACTAAGCTTACAGGCTCACAA 59.676 43.478 0.86 0.00 42.24 3.33
1745 1813 4.065088 CACTAAGCTTACAGGCTCACAAA 58.935 43.478 0.86 0.00 42.24 2.83
1746 1814 4.515191 CACTAAGCTTACAGGCTCACAAAA 59.485 41.667 0.86 0.00 42.24 2.44
1747 1815 4.757149 ACTAAGCTTACAGGCTCACAAAAG 59.243 41.667 0.86 0.00 42.24 2.27
1748 1816 3.492102 AGCTTACAGGCTCACAAAAGA 57.508 42.857 0.00 0.00 38.24 2.52
1749 1817 3.406764 AGCTTACAGGCTCACAAAAGAG 58.593 45.455 0.00 0.00 38.24 2.85
1758 1826 3.736530 CTCACAAAAGAGCAATCCGAG 57.263 47.619 0.00 0.00 0.00 4.63
1759 1827 1.806542 TCACAAAAGAGCAATCCGAGC 59.193 47.619 0.00 0.00 0.00 5.03
1760 1828 1.536766 CACAAAAGAGCAATCCGAGCA 59.463 47.619 0.00 0.00 0.00 4.26
1761 1829 1.537202 ACAAAAGAGCAATCCGAGCAC 59.463 47.619 0.00 0.00 0.00 4.40
1762 1830 1.808945 CAAAAGAGCAATCCGAGCACT 59.191 47.619 0.00 0.00 34.35 4.40
1763 1831 1.731720 AAAGAGCAATCCGAGCACTC 58.268 50.000 0.00 0.00 31.68 3.51
1777 1845 2.734591 ACTCGCGCAGGAGTGAAA 59.265 55.556 15.88 0.00 45.24 2.69
1778 1846 1.373497 ACTCGCGCAGGAGTGAAAG 60.373 57.895 15.88 0.00 45.24 2.62
1779 1847 2.048222 TCGCGCAGGAGTGAAAGG 60.048 61.111 8.75 0.00 0.00 3.11
1780 1848 3.793144 CGCGCAGGAGTGAAAGGC 61.793 66.667 8.75 0.00 0.00 4.35
1781 1849 2.669569 GCGCAGGAGTGAAAGGCA 60.670 61.111 0.30 0.00 0.00 4.75
1782 1850 2.684843 GCGCAGGAGTGAAAGGCAG 61.685 63.158 0.30 0.00 0.00 4.85
1783 1851 2.684843 CGCAGGAGTGAAAGGCAGC 61.685 63.158 0.00 0.00 0.00 5.25
1784 1852 2.338785 GCAGGAGTGAAAGGCAGCC 61.339 63.158 1.84 1.84 0.00 4.85
1785 1853 1.377994 CAGGAGTGAAAGGCAGCCT 59.622 57.895 8.70 8.70 33.89 4.58
1786 1854 0.615331 CAGGAGTGAAAGGCAGCCTA 59.385 55.000 16.56 0.00 32.73 3.93
1787 1855 1.211457 CAGGAGTGAAAGGCAGCCTAT 59.789 52.381 16.56 1.90 32.73 2.57
1788 1856 1.488393 AGGAGTGAAAGGCAGCCTATC 59.512 52.381 16.56 8.10 32.36 2.08
1789 1857 1.475930 GGAGTGAAAGGCAGCCTATCC 60.476 57.143 16.56 13.43 31.13 2.59
1790 1858 0.548510 AGTGAAAGGCAGCCTATCCC 59.451 55.000 16.56 3.55 31.13 3.85
1791 1859 0.548510 GTGAAAGGCAGCCTATCCCT 59.451 55.000 16.56 0.00 31.13 4.20
1792 1860 0.548031 TGAAAGGCAGCCTATCCCTG 59.452 55.000 16.56 0.00 31.13 4.45
1793 1861 0.839946 GAAAGGCAGCCTATCCCTGA 59.160 55.000 16.56 0.00 31.13 3.86
1794 1862 0.548510 AAAGGCAGCCTATCCCTGAC 59.451 55.000 16.56 0.00 38.65 3.51
1795 1863 0.621571 AAGGCAGCCTATCCCTGACA 60.622 55.000 16.56 0.00 40.88 3.58
1796 1864 1.053264 AGGCAGCCTATCCCTGACAG 61.053 60.000 14.18 0.00 40.88 3.51
1797 1865 1.050988 GGCAGCCTATCCCTGACAGA 61.051 60.000 3.29 0.00 38.25 3.41
1798 1866 0.105778 GCAGCCTATCCCTGACAGAC 59.894 60.000 3.32 0.00 32.03 3.51
1799 1867 0.387202 CAGCCTATCCCTGACAGACG 59.613 60.000 3.32 0.00 32.03 4.18
1800 1868 0.259065 AGCCTATCCCTGACAGACGA 59.741 55.000 3.32 0.00 0.00 4.20
1801 1869 0.671251 GCCTATCCCTGACAGACGAG 59.329 60.000 3.32 0.00 0.00 4.18
1802 1870 1.751032 GCCTATCCCTGACAGACGAGA 60.751 57.143 3.32 0.00 0.00 4.04
1803 1871 2.656002 CCTATCCCTGACAGACGAGAA 58.344 52.381 3.32 0.00 0.00 2.87
1804 1872 2.359531 CCTATCCCTGACAGACGAGAAC 59.640 54.545 3.32 0.00 0.00 3.01
1805 1873 2.223803 ATCCCTGACAGACGAGAACT 57.776 50.000 3.32 0.00 0.00 3.01
1806 1874 1.535833 TCCCTGACAGACGAGAACTC 58.464 55.000 3.32 0.00 0.00 3.01
1830 1898 1.932511 GCTTCGAAGAGATGCAGAAGG 59.067 52.381 28.95 0.00 45.93 3.46
1831 1899 2.548875 CTTCGAAGAGATGCAGAAGGG 58.451 52.381 20.74 0.00 38.43 3.95
1832 1900 1.852633 TCGAAGAGATGCAGAAGGGA 58.147 50.000 0.00 0.00 0.00 4.20
1833 1901 2.392662 TCGAAGAGATGCAGAAGGGAT 58.607 47.619 0.00 0.00 0.00 3.85
1834 1902 2.363680 TCGAAGAGATGCAGAAGGGATC 59.636 50.000 0.00 0.00 44.08 3.36
1835 1903 2.102084 CGAAGAGATGCAGAAGGGATCA 59.898 50.000 0.00 0.00 45.99 2.92
1836 1904 3.731089 GAAGAGATGCAGAAGGGATCAG 58.269 50.000 0.00 0.00 45.99 2.90
1837 1905 2.761809 AGAGATGCAGAAGGGATCAGT 58.238 47.619 0.00 0.00 45.99 3.41
1838 1906 3.113824 AGAGATGCAGAAGGGATCAGTT 58.886 45.455 0.00 0.00 45.99 3.16
1839 1907 3.134442 AGAGATGCAGAAGGGATCAGTTC 59.866 47.826 0.00 0.00 45.99 3.01
1840 1908 2.158986 AGATGCAGAAGGGATCAGTTCG 60.159 50.000 0.00 0.00 45.99 3.95
1841 1909 1.266178 TGCAGAAGGGATCAGTTCGA 58.734 50.000 0.00 0.00 0.00 3.71
1842 1910 1.623311 TGCAGAAGGGATCAGTTCGAA 59.377 47.619 0.00 0.00 0.00 3.71
1843 1911 2.275318 GCAGAAGGGATCAGTTCGAAG 58.725 52.381 0.00 0.00 0.00 3.79
1844 1912 2.275318 CAGAAGGGATCAGTTCGAAGC 58.725 52.381 0.00 0.00 0.00 3.86
1845 1913 2.093764 CAGAAGGGATCAGTTCGAAGCT 60.094 50.000 0.00 0.00 0.00 3.74
1846 1914 2.093764 AGAAGGGATCAGTTCGAAGCTG 60.094 50.000 16.74 16.74 35.43 4.24
1847 1915 1.561643 AGGGATCAGTTCGAAGCTGA 58.438 50.000 23.37 23.37 45.59 4.26
1848 1916 1.480137 AGGGATCAGTTCGAAGCTGAG 59.520 52.381 24.46 6.34 44.86 3.35
1849 1917 1.205893 GGGATCAGTTCGAAGCTGAGT 59.794 52.381 24.46 16.87 44.86 3.41
1850 1918 2.354203 GGGATCAGTTCGAAGCTGAGTT 60.354 50.000 24.46 15.12 44.86 3.01
1851 1919 2.670414 GGATCAGTTCGAAGCTGAGTTG 59.330 50.000 24.46 7.61 44.86 3.16
1852 1920 2.154854 TCAGTTCGAAGCTGAGTTGG 57.845 50.000 19.73 2.09 37.98 3.77
1853 1921 1.412710 TCAGTTCGAAGCTGAGTTGGT 59.587 47.619 19.73 0.00 37.98 3.67
1854 1922 2.158957 TCAGTTCGAAGCTGAGTTGGTT 60.159 45.455 19.73 0.00 37.98 3.67
1855 1923 2.032549 CAGTTCGAAGCTGAGTTGGTTG 60.033 50.000 17.52 0.00 36.12 3.77
1856 1924 1.264288 GTTCGAAGCTGAGTTGGTTGG 59.736 52.381 0.00 0.00 0.00 3.77
1857 1925 0.756294 TCGAAGCTGAGTTGGTTGGA 59.244 50.000 0.00 0.00 31.69 3.53
1858 1926 1.151668 CGAAGCTGAGTTGGTTGGAG 58.848 55.000 0.00 0.00 0.00 3.86
1859 1927 0.877743 GAAGCTGAGTTGGTTGGAGC 59.122 55.000 0.00 0.00 0.00 4.70
1860 1928 0.538287 AAGCTGAGTTGGTTGGAGCC 60.538 55.000 0.00 0.00 0.00 4.70
1861 1929 2.328099 GCTGAGTTGGTTGGAGCCG 61.328 63.158 0.00 0.00 0.00 5.52
1862 1930 2.281484 TGAGTTGGTTGGAGCCGC 60.281 61.111 0.00 0.00 0.00 6.53
1863 1931 3.423154 GAGTTGGTTGGAGCCGCG 61.423 66.667 0.00 0.00 0.00 6.46
1869 1937 3.127533 GTTGGAGCCGCGCAGATT 61.128 61.111 8.75 0.00 0.00 2.40
1870 1938 2.819595 TTGGAGCCGCGCAGATTC 60.820 61.111 8.75 0.00 0.00 2.52
1871 1939 3.315142 TTGGAGCCGCGCAGATTCT 62.315 57.895 8.75 0.00 0.00 2.40
1872 1940 2.964389 GGAGCCGCGCAGATTCTC 60.964 66.667 8.75 5.54 0.00 2.87
1873 1941 2.202797 GAGCCGCGCAGATTCTCA 60.203 61.111 8.75 0.00 0.00 3.27
1874 1942 1.593750 GAGCCGCGCAGATTCTCAT 60.594 57.895 8.75 0.00 0.00 2.90
1875 1943 1.555741 GAGCCGCGCAGATTCTCATC 61.556 60.000 8.75 0.00 0.00 2.92
1876 1944 1.884464 GCCGCGCAGATTCTCATCA 60.884 57.895 8.75 0.00 0.00 3.07
1877 1945 1.226686 GCCGCGCAGATTCTCATCAT 61.227 55.000 8.75 0.00 0.00 2.45
1878 1946 0.788995 CCGCGCAGATTCTCATCATC 59.211 55.000 8.75 0.00 0.00 2.92
1879 1947 1.494824 CGCGCAGATTCTCATCATCA 58.505 50.000 8.75 0.00 0.00 3.07
1880 1948 2.067013 CGCGCAGATTCTCATCATCAT 58.933 47.619 8.75 0.00 0.00 2.45
1881 1949 2.092368 CGCGCAGATTCTCATCATCATC 59.908 50.000 8.75 0.00 0.00 2.92
1882 1950 2.092368 GCGCAGATTCTCATCATCATCG 59.908 50.000 0.30 0.00 0.00 3.84
1883 1951 3.572584 CGCAGATTCTCATCATCATCGA 58.427 45.455 0.00 0.00 0.00 3.59
1884 1952 3.985925 CGCAGATTCTCATCATCATCGAA 59.014 43.478 0.00 0.00 0.00 3.71
1885 1953 4.090210 CGCAGATTCTCATCATCATCGAAG 59.910 45.833 0.00 0.00 0.00 3.79
1886 1954 4.143073 GCAGATTCTCATCATCATCGAAGC 60.143 45.833 0.00 0.00 0.00 3.86
1887 1955 4.989168 CAGATTCTCATCATCATCGAAGCA 59.011 41.667 0.00 0.00 0.00 3.91
1888 1956 4.989797 AGATTCTCATCATCATCGAAGCAC 59.010 41.667 0.00 0.00 0.00 4.40
1889 1957 4.397481 TTCTCATCATCATCGAAGCACT 57.603 40.909 0.00 0.00 0.00 4.40
1890 1958 3.714391 TCTCATCATCATCGAAGCACTG 58.286 45.455 0.00 0.00 0.00 3.66
1891 1959 2.801111 CTCATCATCATCGAAGCACTGG 59.199 50.000 0.00 0.00 0.00 4.00
1892 1960 2.431782 TCATCATCATCGAAGCACTGGA 59.568 45.455 0.00 0.00 0.00 3.86
1893 1961 2.299993 TCATCATCGAAGCACTGGAC 57.700 50.000 0.00 0.00 0.00 4.02
1894 1962 1.134699 TCATCATCGAAGCACTGGACC 60.135 52.381 0.00 0.00 0.00 4.46
1895 1963 1.134580 CATCATCGAAGCACTGGACCT 60.135 52.381 0.00 0.00 0.00 3.85
1896 1964 0.247460 TCATCGAAGCACTGGACCTG 59.753 55.000 0.00 0.00 0.00 4.00
1897 1965 0.247460 CATCGAAGCACTGGACCTGA 59.753 55.000 5.22 0.00 0.00 3.86
1898 1966 0.534412 ATCGAAGCACTGGACCTGAG 59.466 55.000 5.22 0.00 0.00 3.35
1899 1967 1.739562 CGAAGCACTGGACCTGAGC 60.740 63.158 11.97 11.97 0.00 4.26
1900 1968 1.372683 GAAGCACTGGACCTGAGCA 59.627 57.895 19.94 0.00 0.00 4.26
1901 1969 0.035630 GAAGCACTGGACCTGAGCAT 60.036 55.000 19.94 10.34 0.00 3.79
1902 1970 0.035630 AAGCACTGGACCTGAGCATC 60.036 55.000 19.94 0.00 0.00 3.91
1903 1971 0.908656 AGCACTGGACCTGAGCATCT 60.909 55.000 19.94 0.31 34.92 2.90
1904 1972 0.035630 GCACTGGACCTGAGCATCTT 60.036 55.000 14.45 0.00 34.92 2.40
1905 1973 1.735386 CACTGGACCTGAGCATCTTG 58.265 55.000 5.22 0.00 34.92 3.02
1906 1974 0.617413 ACTGGACCTGAGCATCTTGG 59.383 55.000 5.22 0.00 35.97 3.61
1907 1975 0.747283 CTGGACCTGAGCATCTTGGC 60.747 60.000 0.00 0.00 33.84 4.52
1920 1988 3.445518 CTTGGCTCCGCGCTCCATA 62.446 63.158 5.56 0.00 39.13 2.74
2059 2129 2.354805 GCTCCGAGTTCCAATGTAGGTT 60.355 50.000 0.00 0.00 0.00 3.50
2092 2162 4.406943 CCTCTTTTCGCTTCAAATGCTAC 58.593 43.478 0.00 0.00 0.00 3.58
2093 2163 4.065423 TCTTTTCGCTTCAAATGCTACG 57.935 40.909 0.00 0.00 0.00 3.51
2094 2164 3.496884 TCTTTTCGCTTCAAATGCTACGT 59.503 39.130 0.00 0.00 0.00 3.57
2123 2195 6.260936 ACATATGCTTCTTAATGACCTTTCGG 59.739 38.462 1.58 0.00 0.00 4.30
2260 2347 0.109532 TGTCCCATTGTCGGCTGAAA 59.890 50.000 0.00 0.00 0.00 2.69
2394 2482 6.089820 GCAATTGGTTACATGTTCACATTGAG 59.910 38.462 2.30 0.00 33.61 3.02
2440 2528 3.778954 AACTTAACTCTTCTGCAGGCT 57.221 42.857 15.13 0.00 0.00 4.58
2443 2531 2.941453 TAACTCTTCTGCAGGCTACG 57.059 50.000 15.13 1.72 0.00 3.51
2464 2552 1.380380 GACAGGAGGGCCAAATGGG 60.380 63.158 6.18 0.00 40.85 4.00
2539 2627 6.148811 GGTTATGTTACAGTTAAGCTCTGCAA 59.851 38.462 0.97 0.00 36.50 4.08
2540 2628 5.869753 ATGTTACAGTTAAGCTCTGCAAG 57.130 39.130 0.97 0.00 36.50 4.01
2583 2671 3.674753 CGGCCTTGTTGTTTGATCAATTC 59.325 43.478 9.40 6.59 0.00 2.17
2584 2672 3.996363 GGCCTTGTTGTTTGATCAATTCC 59.004 43.478 9.40 1.31 0.00 3.01
2630 2719 1.490490 AGCAGACCTGAAAACAGTGGA 59.510 47.619 0.47 0.00 0.00 4.02
2645 2734 1.699634 AGTGGACTTTCTGCTGCCTTA 59.300 47.619 0.00 0.00 0.00 2.69
2657 2746 3.566351 TGCTGCCTTAGATCTGCTAGTA 58.434 45.455 5.18 0.00 0.00 1.82
2675 2764 7.841915 GCTAGTAGAAGCAAAGAAAGAGATT 57.158 36.000 0.00 0.00 42.30 2.40
2681 2770 7.155655 AGAAGCAAAGAAAGAGATTGATTCC 57.844 36.000 10.88 0.00 45.62 3.01
2684 2773 7.622893 AGCAAAGAAAGAGATTGATTCCTAC 57.377 36.000 0.00 0.00 0.00 3.18
2718 2807 3.942748 CCCCATTTCATTTGCAGATTTGG 59.057 43.478 0.00 0.00 0.00 3.28
2728 2817 5.404466 TTTGCAGATTTGGTCCAAATAGG 57.596 39.130 26.43 21.38 43.05 2.57
2729 2818 3.364549 TGCAGATTTGGTCCAAATAGGG 58.635 45.455 26.43 19.31 43.05 3.53
2733 2822 4.079443 CAGATTTGGTCCAAATAGGGGGTA 60.079 45.833 26.43 0.00 43.05 3.69
2736 2825 1.497286 TGGTCCAAATAGGGGGTATGC 59.503 52.381 0.00 0.00 38.24 3.14
2743 2841 6.015434 GTCCAAATAGGGGGTATGCTAATTTG 60.015 42.308 0.00 0.00 38.24 2.32
2764 2862 7.500720 TTTGATTAGCCATATGATCTGTGTG 57.499 36.000 3.65 0.00 0.00 3.82
2765 2863 6.178607 TGATTAGCCATATGATCTGTGTGT 57.821 37.500 3.65 0.00 0.00 3.72
2768 2866 6.478512 TTAGCCATATGATCTGTGTGTGTA 57.521 37.500 3.65 0.00 0.00 2.90
2769 2867 4.697514 AGCCATATGATCTGTGTGTGTAC 58.302 43.478 3.65 0.00 0.00 2.90
2770 2868 4.406972 AGCCATATGATCTGTGTGTGTACT 59.593 41.667 3.65 0.00 0.00 2.73
2771 2869 4.509230 GCCATATGATCTGTGTGTGTACTG 59.491 45.833 3.65 0.00 0.00 2.74
2772 2870 4.509230 CCATATGATCTGTGTGTGTACTGC 59.491 45.833 3.65 0.00 0.00 4.40
2773 2871 3.683365 ATGATCTGTGTGTGTACTGCA 57.317 42.857 0.00 0.00 0.00 4.41
2794 2892 8.914011 ACTGCACTACTGATGTATACTCAAATA 58.086 33.333 4.17 1.67 0.00 1.40
2795 2893 9.750125 CTGCACTACTGATGTATACTCAAATAA 57.250 33.333 4.17 0.00 0.00 1.40
2835 2933 4.466828 CATCACAGGCACTTAAGAAAACG 58.533 43.478 10.09 0.00 34.60 3.60
2872 2970 2.358247 CCAAGACCGGTGGGAACG 60.358 66.667 14.63 0.00 36.97 3.95
2886 2984 1.066071 GGGAACGAAGAGAAGGGAAGG 60.066 57.143 0.00 0.00 0.00 3.46
2928 3026 3.281727 TCAAGTGGGCAGGTATTCATC 57.718 47.619 0.00 0.00 0.00 2.92
2933 3031 1.922447 TGGGCAGGTATTCATCCACTT 59.078 47.619 0.00 0.00 0.00 3.16
2940 3038 2.213499 GTATTCATCCACTTCGCCAGG 58.787 52.381 0.00 0.00 0.00 4.45
3004 3102 7.208080 ACCTAGTTTGCTAATATACAAGTCGG 58.792 38.462 0.00 0.00 0.00 4.79
3044 3156 6.072119 AGTGGGGTTTCTTCGACAAAATATTC 60.072 38.462 0.00 0.00 0.00 1.75
3188 3300 9.823647 ACTTCTACTCATTGATCGTTTCATAAT 57.176 29.630 0.00 0.00 33.34 1.28
3194 3306 8.616076 ACTCATTGATCGTTTCATAATTTCTCC 58.384 33.333 0.00 0.00 33.34 3.71
3200 3312 9.667107 TGATCGTTTCATAATTTCTCCTTTAGT 57.333 29.630 0.00 0.00 0.00 2.24
3229 3341 5.947228 TCACTTTTTCTATTGGACTGCAG 57.053 39.130 13.48 13.48 0.00 4.41
3233 3345 6.016777 CACTTTTTCTATTGGACTGCAGAAGT 60.017 38.462 23.35 11.73 43.85 3.01
3253 3365 6.708054 AGAAGTTGTGATTTCAGTCTAACCAG 59.292 38.462 0.00 0.00 0.00 4.00
3873 3985 0.671251 GTGAGTAGATCGGCAGGAGG 59.329 60.000 0.00 0.00 0.00 4.30
3966 4078 5.820947 TGTATGTTGTCTATCGACTAGCTCA 59.179 40.000 0.00 0.00 40.86 4.26
4195 4310 1.685224 CTTGGGCTGGCCTACTTGA 59.315 57.895 21.72 0.00 36.10 3.02
4359 4474 2.851195 TGAAGCTCCCTTGAAAGTGAC 58.149 47.619 0.00 0.00 0.00 3.67
4379 4494 0.817634 TGTTTGTTGCCGACCTCCTG 60.818 55.000 0.00 0.00 0.00 3.86
4428 4543 4.389374 CCACCTGTTGAGAGAAAAGCTTA 58.611 43.478 0.00 0.00 0.00 3.09
4502 4622 3.494336 CAAGCCGGCTCTTGCGAG 61.494 66.667 32.93 9.98 40.82 5.03
4570 4690 2.728318 GGAGTAGGTTTGTTCGACGAAC 59.272 50.000 29.27 29.27 40.84 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.546002 TGCACTTGTACAATTAACGGC 57.454 42.857 9.13 4.07 0.00 5.68
12 13 6.594788 AAGGATCAATTGCACTTGTACAAT 57.405 33.333 15.50 2.97 38.11 2.71
14 15 5.534278 TGAAAGGATCAATTGCACTTGTACA 59.466 36.000 15.50 0.00 34.30 2.90
15 16 6.012658 TGAAAGGATCAATTGCACTTGTAC 57.987 37.500 15.50 10.75 34.30 2.90
21 22 3.760684 AGGTCTGAAAGGATCAATTGCAC 59.239 43.478 0.00 0.00 37.67 4.57
54 55 6.810911 AGAACAGAAGTATGCATAGGTGTAG 58.189 40.000 6.67 0.00 0.00 2.74
102 107 4.705110 ATCCGGGACAAATATGATCACA 57.295 40.909 0.00 0.00 0.00 3.58
108 113 6.208644 GTGATGAAAATCCGGGACAAATATG 58.791 40.000 0.00 0.00 0.00 1.78
111 116 3.128589 CGTGATGAAAATCCGGGACAAAT 59.871 43.478 0.00 0.00 0.00 2.32
272 277 1.528341 TAGGCCTGGTTCTCCCTCCT 61.528 60.000 17.99 0.00 32.97 3.69
318 323 3.561241 TGGGCCACTTGTGCGGTA 61.561 61.111 0.00 0.00 0.00 4.02
323 328 0.322816 ATAGCAGTGGGCCACTTGTG 60.323 55.000 35.95 25.86 42.59 3.33
324 329 0.035056 GATAGCAGTGGGCCACTTGT 60.035 55.000 35.95 26.39 42.59 3.16
348 353 3.999663 GCAGTTGCTATATCTAGGGCAAG 59.000 47.826 0.00 0.00 43.76 4.01
460 469 4.082733 TCACTCACAGTAGTACATGCAGTC 60.083 45.833 2.52 0.00 0.00 3.51
478 487 4.095610 CAAAACAACGGAACAAGTCACTC 58.904 43.478 0.00 0.00 0.00 3.51
562 571 8.562892 GGATTCATCATCACGAGTGAAAATAAT 58.437 33.333 10.15 6.89 43.58 1.28
563 572 7.770433 AGGATTCATCATCACGAGTGAAAATAA 59.230 33.333 10.15 2.68 43.58 1.40
564 573 7.275183 AGGATTCATCATCACGAGTGAAAATA 58.725 34.615 10.15 0.00 43.58 1.40
565 574 6.118170 AGGATTCATCATCACGAGTGAAAAT 58.882 36.000 10.15 4.26 43.58 1.82
566 575 5.491070 AGGATTCATCATCACGAGTGAAAA 58.509 37.500 10.15 2.03 43.58 2.29
567 576 5.089970 AGGATTCATCATCACGAGTGAAA 57.910 39.130 10.15 2.38 43.58 2.69
568 577 4.442052 GGAGGATTCATCATCACGAGTGAA 60.442 45.833 10.15 0.00 43.58 3.18
569 578 3.068732 GGAGGATTCATCATCACGAGTGA 59.931 47.826 8.48 8.48 44.59 3.41
570 579 3.388308 GGAGGATTCATCATCACGAGTG 58.612 50.000 4.00 0.00 39.21 3.51
571 580 2.366916 GGGAGGATTCATCATCACGAGT 59.633 50.000 4.00 0.00 39.21 4.18
572 581 2.632028 AGGGAGGATTCATCATCACGAG 59.368 50.000 4.00 0.00 45.03 4.18
573 582 2.682594 AGGGAGGATTCATCATCACGA 58.317 47.619 4.00 0.00 45.03 4.35
574 583 3.306364 GGTAGGGAGGATTCATCATCACG 60.306 52.174 4.00 0.00 45.03 4.35
575 584 3.008485 GGGTAGGGAGGATTCATCATCAC 59.992 52.174 4.00 0.00 41.05 3.06
576 585 3.116199 AGGGTAGGGAGGATTCATCATCA 60.116 47.826 4.00 0.00 39.21 3.07
577 586 3.262915 CAGGGTAGGGAGGATTCATCATC 59.737 52.174 0.25 0.00 36.91 2.92
578 587 3.254960 CAGGGTAGGGAGGATTCATCAT 58.745 50.000 0.25 0.00 0.00 2.45
586 595 1.952621 CTGAAACAGGGTAGGGAGGA 58.047 55.000 0.00 0.00 0.00 3.71
594 603 3.806949 TTAATGGAGCTGAAACAGGGT 57.193 42.857 0.00 0.00 31.21 4.34
613 622 2.084546 GCTTGTTACAGAGGGCGAATT 58.915 47.619 0.00 0.00 0.00 2.17
614 623 1.739067 GCTTGTTACAGAGGGCGAAT 58.261 50.000 0.00 0.00 0.00 3.34
615 624 0.669318 CGCTTGTTACAGAGGGCGAA 60.669 55.000 14.69 0.00 44.36 4.70
616 625 1.080093 CGCTTGTTACAGAGGGCGA 60.080 57.895 14.69 0.00 44.36 5.54
628 637 1.134560 GCTGCTACTACCTACGCTTGT 59.865 52.381 0.00 0.00 0.00 3.16
629 638 1.134367 TGCTGCTACTACCTACGCTTG 59.866 52.381 0.00 0.00 0.00 4.01
630 639 1.134560 GTGCTGCTACTACCTACGCTT 59.865 52.381 0.00 0.00 0.00 4.68
694 729 3.009140 CATCATGGCTCGTGCGAC 58.991 61.111 3.02 0.00 40.82 5.19
730 768 0.167251 CATTGTTACCGAACCGTGCC 59.833 55.000 0.00 0.00 34.38 5.01
732 770 1.195900 CCACATTGTTACCGAACCGTG 59.804 52.381 0.00 0.00 34.38 4.94
733 771 1.070445 TCCACATTGTTACCGAACCGT 59.930 47.619 0.00 0.00 34.38 4.83
734 772 1.798283 TCCACATTGTTACCGAACCG 58.202 50.000 0.00 0.00 34.38 4.44
735 773 2.095415 GCTTCCACATTGTTACCGAACC 60.095 50.000 0.00 0.00 34.38 3.62
736 774 2.095415 GGCTTCCACATTGTTACCGAAC 60.095 50.000 0.00 0.00 36.00 3.95
737 775 2.156098 GGCTTCCACATTGTTACCGAA 58.844 47.619 0.00 0.00 0.00 4.30
795 833 2.098443 CCACACGTTTGCTGGTAAAACT 59.902 45.455 0.00 0.00 35.75 2.66
822 863 1.026182 TGCATTCTCCATGTCGCCAC 61.026 55.000 0.00 0.00 34.98 5.01
850 891 0.546122 ATAAGGCAGCCAATCACGGA 59.454 50.000 15.80 0.00 0.00 4.69
851 892 0.947244 GATAAGGCAGCCAATCACGG 59.053 55.000 15.80 0.00 0.00 4.94
852 893 0.947244 GGATAAGGCAGCCAATCACG 59.053 55.000 22.12 0.00 30.82 4.35
853 894 0.947244 CGGATAAGGCAGCCAATCAC 59.053 55.000 22.12 13.52 30.82 3.06
854 895 0.819259 GCGGATAAGGCAGCCAATCA 60.819 55.000 22.12 3.48 30.82 2.57
855 896 1.518903 GGCGGATAAGGCAGCCAATC 61.519 60.000 15.80 15.60 46.54 2.67
856 897 1.529244 GGCGGATAAGGCAGCCAAT 60.529 57.895 15.80 6.61 46.54 3.16
857 898 2.124320 GGCGGATAAGGCAGCCAA 60.124 61.111 15.80 0.63 46.54 4.52
859 900 3.750373 TTCGGCGGATAAGGCAGCC 62.750 63.158 7.21 1.84 44.31 4.85
860 901 1.569479 GATTCGGCGGATAAGGCAGC 61.569 60.000 7.21 0.00 36.37 5.25
861 902 0.951040 GGATTCGGCGGATAAGGCAG 60.951 60.000 7.21 0.00 36.37 4.85
862 903 1.070786 GGATTCGGCGGATAAGGCA 59.929 57.895 7.21 0.00 36.37 4.75
863 904 0.606604 TAGGATTCGGCGGATAAGGC 59.393 55.000 7.21 0.00 0.00 4.35
864 905 1.616865 TGTAGGATTCGGCGGATAAGG 59.383 52.381 7.21 0.00 0.00 2.69
865 906 2.673833 GTGTAGGATTCGGCGGATAAG 58.326 52.381 7.21 0.00 0.00 1.73
866 907 1.001048 CGTGTAGGATTCGGCGGATAA 60.001 52.381 7.21 0.00 0.00 1.75
867 908 0.594602 CGTGTAGGATTCGGCGGATA 59.405 55.000 7.21 0.00 0.00 2.59
868 909 1.362717 CGTGTAGGATTCGGCGGAT 59.637 57.895 7.21 2.43 0.00 4.18
869 910 2.048023 ACGTGTAGGATTCGGCGGA 61.048 57.895 7.21 0.00 0.00 5.54
870 911 1.876714 CACGTGTAGGATTCGGCGG 60.877 63.158 7.58 0.00 0.00 6.13
871 912 2.514013 GCACGTGTAGGATTCGGCG 61.514 63.158 18.38 0.00 0.00 6.46
872 913 1.421410 CTGCACGTGTAGGATTCGGC 61.421 60.000 24.15 2.95 0.00 5.54
873 914 2.665777 CTGCACGTGTAGGATTCGG 58.334 57.895 24.15 3.72 0.00 4.30
880 921 2.649034 ACGGACCTGCACGTGTAG 59.351 61.111 24.79 24.79 42.39 2.74
884 925 1.667830 CAATCACGGACCTGCACGT 60.668 57.895 0.00 0.00 45.25 4.49
885 926 2.390599 CCAATCACGGACCTGCACG 61.391 63.158 0.00 0.00 0.00 5.34
886 927 2.690778 GCCAATCACGGACCTGCAC 61.691 63.158 0.00 0.00 0.00 4.57
887 928 2.359850 GCCAATCACGGACCTGCA 60.360 61.111 0.00 0.00 0.00 4.41
888 929 2.045926 AGCCAATCACGGACCTGC 60.046 61.111 0.00 0.00 0.00 4.85
889 930 2.401766 GCAGCCAATCACGGACCTG 61.402 63.158 0.00 0.00 0.00 4.00
890 931 2.045926 GCAGCCAATCACGGACCT 60.046 61.111 0.00 0.00 0.00 3.85
891 932 3.134127 GGCAGCCAATCACGGACC 61.134 66.667 6.55 0.00 0.00 4.46
892 933 0.392461 TAAGGCAGCCAATCACGGAC 60.392 55.000 15.80 0.00 0.00 4.79
893 934 0.546122 ATAAGGCAGCCAATCACGGA 59.454 50.000 15.80 0.00 0.00 4.69
902 943 3.750373 TTCGGCGGATAAGGCAGCC 62.750 63.158 7.21 1.84 44.31 4.85
981 1022 4.415332 CACGGTCTCGGTCACGGG 62.415 72.222 0.00 0.00 43.55 5.28
1016 1057 1.815421 CGCCATTTCCCTCACTCCG 60.815 63.158 0.00 0.00 0.00 4.63
1127 1177 1.586564 GGACTCGCGGTCTGAATCG 60.587 63.158 21.54 0.00 43.97 3.34
1145 1195 3.873952 GCTGTTAACTTAGCATGAGAGGG 59.126 47.826 11.89 0.00 39.67 4.30
1148 1198 6.467677 AGAAAGCTGTTAACTTAGCATGAGA 58.532 36.000 17.40 0.00 42.29 3.27
1149 1199 6.183360 GGAGAAAGCTGTTAACTTAGCATGAG 60.183 42.308 17.40 1.63 42.29 2.90
1150 1200 5.643777 GGAGAAAGCTGTTAACTTAGCATGA 59.356 40.000 17.40 0.00 42.29 3.07
1151 1201 5.446473 CGGAGAAAGCTGTTAACTTAGCATG 60.446 44.000 17.40 0.00 42.29 4.06
1152 1202 4.631813 CGGAGAAAGCTGTTAACTTAGCAT 59.368 41.667 17.40 5.48 42.29 3.79
1155 1205 4.143094 GCACGGAGAAAGCTGTTAACTTAG 60.143 45.833 7.22 0.00 0.00 2.18
1157 1207 2.548480 GCACGGAGAAAGCTGTTAACTT 59.452 45.455 7.22 0.00 0.00 2.66
1158 1208 2.143925 GCACGGAGAAAGCTGTTAACT 58.856 47.619 7.22 0.00 0.00 2.24
1159 1209 1.871039 TGCACGGAGAAAGCTGTTAAC 59.129 47.619 0.00 0.00 0.00 2.01
1160 1210 2.143122 CTGCACGGAGAAAGCTGTTAA 58.857 47.619 0.00 0.00 0.00 2.01
1161 1211 1.343142 TCTGCACGGAGAAAGCTGTTA 59.657 47.619 0.00 0.00 0.00 2.41
1162 1212 0.106708 TCTGCACGGAGAAAGCTGTT 59.893 50.000 0.00 0.00 0.00 3.16
1163 1213 0.322975 ATCTGCACGGAGAAAGCTGT 59.677 50.000 0.00 0.00 0.00 4.40
1164 1214 1.396301 GAATCTGCACGGAGAAAGCTG 59.604 52.381 0.00 0.00 0.00 4.24
1435 1503 2.751436 CCATGGAGGTGCCGGTTG 60.751 66.667 5.56 0.00 40.66 3.77
1440 1508 2.365410 AAAAAGCCATGGAGGTGCC 58.635 52.632 18.40 0.00 40.61 5.01
1460 1528 0.747852 GTTGAGGCCCGGTTCAAAAA 59.252 50.000 12.98 0.00 35.29 1.94
1461 1529 1.110518 GGTTGAGGCCCGGTTCAAAA 61.111 55.000 12.98 0.00 35.29 2.44
1462 1530 1.529713 GGTTGAGGCCCGGTTCAAA 60.530 57.895 12.98 0.00 35.29 2.69
1463 1531 2.114411 GGTTGAGGCCCGGTTCAA 59.886 61.111 0.00 0.00 0.00 2.69
1464 1532 3.961414 GGGTTGAGGCCCGGTTCA 61.961 66.667 0.00 0.00 39.17 3.18
1471 1539 0.252239 AATGGAAAGGGGTTGAGGCC 60.252 55.000 0.00 0.00 0.00 5.19
1472 1540 2.525105 TAATGGAAAGGGGTTGAGGC 57.475 50.000 0.00 0.00 0.00 4.70
1473 1541 4.322725 GCTTTTAATGGAAAGGGGTTGAGG 60.323 45.833 3.96 0.00 37.17 3.86
1474 1542 4.283212 TGCTTTTAATGGAAAGGGGTTGAG 59.717 41.667 3.96 0.00 37.17 3.02
1475 1543 4.227197 TGCTTTTAATGGAAAGGGGTTGA 58.773 39.130 3.96 0.00 37.17 3.18
1476 1544 4.615588 TGCTTTTAATGGAAAGGGGTTG 57.384 40.909 3.96 0.00 37.17 3.77
1477 1545 6.573485 CGTTATGCTTTTAATGGAAAGGGGTT 60.573 38.462 3.96 0.00 37.17 4.11
1478 1546 5.105513 CGTTATGCTTTTAATGGAAAGGGGT 60.106 40.000 3.96 0.00 37.17 4.95
1479 1547 5.348164 CGTTATGCTTTTAATGGAAAGGGG 58.652 41.667 3.96 0.00 37.17 4.79
1480 1548 5.126384 TCCGTTATGCTTTTAATGGAAAGGG 59.874 40.000 11.02 0.00 41.91 3.95
1481 1549 6.202516 TCCGTTATGCTTTTAATGGAAAGG 57.797 37.500 11.02 0.00 41.91 3.11
1485 1553 8.282455 TGTATTTCCGTTATGCTTTTAATGGA 57.718 30.769 9.94 9.94 42.72 3.41
1491 1559 8.952278 TGAAGTATGTATTTCCGTTATGCTTTT 58.048 29.630 0.00 0.00 0.00 2.27
1492 1560 8.500753 TGAAGTATGTATTTCCGTTATGCTTT 57.499 30.769 0.00 0.00 0.00 3.51
1493 1561 7.985184 TCTGAAGTATGTATTTCCGTTATGCTT 59.015 33.333 0.00 0.00 0.00 3.91
1494 1562 7.497595 TCTGAAGTATGTATTTCCGTTATGCT 58.502 34.615 0.00 0.00 0.00 3.79
1495 1563 7.652105 TCTCTGAAGTATGTATTTCCGTTATGC 59.348 37.037 0.00 0.00 0.00 3.14
1496 1564 9.529325 TTCTCTGAAGTATGTATTTCCGTTATG 57.471 33.333 0.00 0.00 0.00 1.90
1497 1565 9.530633 GTTCTCTGAAGTATGTATTTCCGTTAT 57.469 33.333 0.00 0.00 0.00 1.89
1498 1566 7.977853 GGTTCTCTGAAGTATGTATTTCCGTTA 59.022 37.037 0.00 0.00 0.00 3.18
1499 1567 6.817140 GGTTCTCTGAAGTATGTATTTCCGTT 59.183 38.462 0.00 0.00 0.00 4.44
1500 1568 6.070995 TGGTTCTCTGAAGTATGTATTTCCGT 60.071 38.462 0.00 0.00 0.00 4.69
1501 1569 6.255887 GTGGTTCTCTGAAGTATGTATTTCCG 59.744 42.308 0.00 0.00 0.00 4.30
1502 1570 7.103641 TGTGGTTCTCTGAAGTATGTATTTCC 58.896 38.462 0.00 0.00 0.00 3.13
1503 1571 8.035394 TCTGTGGTTCTCTGAAGTATGTATTTC 58.965 37.037 0.00 0.00 0.00 2.17
1504 1572 7.819900 GTCTGTGGTTCTCTGAAGTATGTATTT 59.180 37.037 0.00 0.00 0.00 1.40
1505 1573 7.324178 GTCTGTGGTTCTCTGAAGTATGTATT 58.676 38.462 0.00 0.00 0.00 1.89
1506 1574 6.127310 GGTCTGTGGTTCTCTGAAGTATGTAT 60.127 42.308 0.00 0.00 0.00 2.29
1507 1575 5.185249 GGTCTGTGGTTCTCTGAAGTATGTA 59.815 44.000 0.00 0.00 0.00 2.29
1508 1576 4.021016 GGTCTGTGGTTCTCTGAAGTATGT 60.021 45.833 0.00 0.00 0.00 2.29
1509 1577 4.499183 GGTCTGTGGTTCTCTGAAGTATG 58.501 47.826 0.00 0.00 0.00 2.39
1510 1578 3.515901 GGGTCTGTGGTTCTCTGAAGTAT 59.484 47.826 0.00 0.00 0.00 2.12
1511 1579 2.897969 GGGTCTGTGGTTCTCTGAAGTA 59.102 50.000 0.00 0.00 0.00 2.24
1512 1580 1.694696 GGGTCTGTGGTTCTCTGAAGT 59.305 52.381 0.00 0.00 0.00 3.01
1513 1581 1.694150 TGGGTCTGTGGTTCTCTGAAG 59.306 52.381 0.00 0.00 0.00 3.02
1514 1582 1.801242 TGGGTCTGTGGTTCTCTGAA 58.199 50.000 0.00 0.00 0.00 3.02
1515 1583 1.694150 CTTGGGTCTGTGGTTCTCTGA 59.306 52.381 0.00 0.00 0.00 3.27
1516 1584 1.694150 TCTTGGGTCTGTGGTTCTCTG 59.306 52.381 0.00 0.00 0.00 3.35
1517 1585 2.103153 TCTTGGGTCTGTGGTTCTCT 57.897 50.000 0.00 0.00 0.00 3.10
1518 1586 2.495084 GTTCTTGGGTCTGTGGTTCTC 58.505 52.381 0.00 0.00 0.00 2.87
1519 1587 1.143073 GGTTCTTGGGTCTGTGGTTCT 59.857 52.381 0.00 0.00 0.00 3.01
1520 1588 1.133915 TGGTTCTTGGGTCTGTGGTTC 60.134 52.381 0.00 0.00 0.00 3.62
1521 1589 0.923358 TGGTTCTTGGGTCTGTGGTT 59.077 50.000 0.00 0.00 0.00 3.67
1522 1590 0.923358 TTGGTTCTTGGGTCTGTGGT 59.077 50.000 0.00 0.00 0.00 4.16
1523 1591 2.065899 TTTGGTTCTTGGGTCTGTGG 57.934 50.000 0.00 0.00 0.00 4.17
1524 1592 3.636300 TGAATTTGGTTCTTGGGTCTGTG 59.364 43.478 0.00 0.00 37.72 3.66
1525 1593 3.891366 CTGAATTTGGTTCTTGGGTCTGT 59.109 43.478 0.00 0.00 37.72 3.41
1526 1594 3.305608 GCTGAATTTGGTTCTTGGGTCTG 60.306 47.826 0.00 0.00 37.72 3.51
1527 1595 2.893489 GCTGAATTTGGTTCTTGGGTCT 59.107 45.455 0.00 0.00 37.72 3.85
1528 1596 2.627699 TGCTGAATTTGGTTCTTGGGTC 59.372 45.455 0.00 0.00 37.72 4.46
1529 1597 2.676748 TGCTGAATTTGGTTCTTGGGT 58.323 42.857 0.00 0.00 37.72 4.51
1530 1598 3.967332 ATGCTGAATTTGGTTCTTGGG 57.033 42.857 0.00 0.00 37.72 4.12
1531 1599 5.185635 TCCTTATGCTGAATTTGGTTCTTGG 59.814 40.000 0.00 0.00 37.72 3.61
1532 1600 6.271488 TCCTTATGCTGAATTTGGTTCTTG 57.729 37.500 0.00 0.00 37.72 3.02
1533 1601 6.916360 TTCCTTATGCTGAATTTGGTTCTT 57.084 33.333 0.00 0.00 37.72 2.52
1534 1602 6.494835 AGTTTCCTTATGCTGAATTTGGTTCT 59.505 34.615 0.00 0.00 37.72 3.01
1535 1603 6.691508 AGTTTCCTTATGCTGAATTTGGTTC 58.308 36.000 0.00 0.00 37.35 3.62
1536 1604 6.670695 AGTTTCCTTATGCTGAATTTGGTT 57.329 33.333 0.00 0.00 0.00 3.67
1537 1605 7.175104 TCTAGTTTCCTTATGCTGAATTTGGT 58.825 34.615 0.00 0.00 0.00 3.67
1538 1606 7.630242 TCTAGTTTCCTTATGCTGAATTTGG 57.370 36.000 0.00 0.00 0.00 3.28
1539 1607 9.565213 CTTTCTAGTTTCCTTATGCTGAATTTG 57.435 33.333 0.00 0.00 0.00 2.32
1540 1608 8.743714 CCTTTCTAGTTTCCTTATGCTGAATTT 58.256 33.333 0.00 0.00 0.00 1.82
1541 1609 7.890655 ACCTTTCTAGTTTCCTTATGCTGAATT 59.109 33.333 0.00 0.00 0.00 2.17
1542 1610 7.337942 CACCTTTCTAGTTTCCTTATGCTGAAT 59.662 37.037 0.00 0.00 0.00 2.57
1543 1611 6.655003 CACCTTTCTAGTTTCCTTATGCTGAA 59.345 38.462 0.00 0.00 0.00 3.02
1544 1612 6.173339 CACCTTTCTAGTTTCCTTATGCTGA 58.827 40.000 0.00 0.00 0.00 4.26
1545 1613 5.355350 CCACCTTTCTAGTTTCCTTATGCTG 59.645 44.000 0.00 0.00 0.00 4.41
1546 1614 5.501156 CCACCTTTCTAGTTTCCTTATGCT 58.499 41.667 0.00 0.00 0.00 3.79
1547 1615 4.640647 CCCACCTTTCTAGTTTCCTTATGC 59.359 45.833 0.00 0.00 0.00 3.14
1548 1616 5.193679 CCCCACCTTTCTAGTTTCCTTATG 58.806 45.833 0.00 0.00 0.00 1.90
1549 1617 4.325109 GCCCCACCTTTCTAGTTTCCTTAT 60.325 45.833 0.00 0.00 0.00 1.73
1550 1618 3.009805 GCCCCACCTTTCTAGTTTCCTTA 59.990 47.826 0.00 0.00 0.00 2.69
1551 1619 2.225041 GCCCCACCTTTCTAGTTTCCTT 60.225 50.000 0.00 0.00 0.00 3.36
1552 1620 1.354705 GCCCCACCTTTCTAGTTTCCT 59.645 52.381 0.00 0.00 0.00 3.36
1553 1621 1.835494 GCCCCACCTTTCTAGTTTCC 58.165 55.000 0.00 0.00 0.00 3.13
1554 1622 1.002773 TCGCCCCACCTTTCTAGTTTC 59.997 52.381 0.00 0.00 0.00 2.78
1555 1623 1.003233 CTCGCCCCACCTTTCTAGTTT 59.997 52.381 0.00 0.00 0.00 2.66
1556 1624 0.613777 CTCGCCCCACCTTTCTAGTT 59.386 55.000 0.00 0.00 0.00 2.24
1557 1625 0.544595 ACTCGCCCCACCTTTCTAGT 60.545 55.000 0.00 0.00 0.00 2.57
1558 1626 0.613777 AACTCGCCCCACCTTTCTAG 59.386 55.000 0.00 0.00 0.00 2.43
1559 1627 0.611714 GAACTCGCCCCACCTTTCTA 59.388 55.000 0.00 0.00 0.00 2.10
1560 1628 1.375326 GAACTCGCCCCACCTTTCT 59.625 57.895 0.00 0.00 0.00 2.52
1561 1629 0.536460 TTGAACTCGCCCCACCTTTC 60.536 55.000 0.00 0.00 0.00 2.62
1562 1630 0.537371 CTTGAACTCGCCCCACCTTT 60.537 55.000 0.00 0.00 0.00 3.11
1563 1631 1.073199 CTTGAACTCGCCCCACCTT 59.927 57.895 0.00 0.00 0.00 3.50
1564 1632 2.750350 CTTGAACTCGCCCCACCT 59.250 61.111 0.00 0.00 0.00 4.00
1565 1633 2.359975 CCTTGAACTCGCCCCACC 60.360 66.667 0.00 0.00 0.00 4.61
1566 1634 3.056328 GCCTTGAACTCGCCCCAC 61.056 66.667 0.00 0.00 0.00 4.61
1567 1635 3.565214 TGCCTTGAACTCGCCCCA 61.565 61.111 0.00 0.00 0.00 4.96
1568 1636 3.056328 GTGCCTTGAACTCGCCCC 61.056 66.667 0.00 0.00 0.00 5.80
1569 1637 3.056328 GGTGCCTTGAACTCGCCC 61.056 66.667 0.00 0.00 0.00 6.13
1570 1638 2.281484 TGGTGCCTTGAACTCGCC 60.281 61.111 0.00 0.00 0.00 5.54
1571 1639 0.320421 TACTGGTGCCTTGAACTCGC 60.320 55.000 0.00 0.00 0.00 5.03
1572 1640 1.673033 CCTACTGGTGCCTTGAACTCG 60.673 57.143 0.00 0.00 0.00 4.18
1573 1641 1.623811 TCCTACTGGTGCCTTGAACTC 59.376 52.381 0.00 0.00 34.23 3.01
1574 1642 1.729586 TCCTACTGGTGCCTTGAACT 58.270 50.000 0.00 0.00 34.23 3.01
1575 1643 2.552743 GTTTCCTACTGGTGCCTTGAAC 59.447 50.000 0.00 0.00 34.23 3.18
1576 1644 2.488347 GGTTTCCTACTGGTGCCTTGAA 60.488 50.000 0.00 0.00 34.23 2.69
1577 1645 1.073284 GGTTTCCTACTGGTGCCTTGA 59.927 52.381 0.00 0.00 34.23 3.02
1578 1646 1.534729 GGTTTCCTACTGGTGCCTTG 58.465 55.000 0.00 0.00 34.23 3.61
1579 1647 0.404426 GGGTTTCCTACTGGTGCCTT 59.596 55.000 0.00 0.00 34.23 4.35
1580 1648 0.770557 TGGGTTTCCTACTGGTGCCT 60.771 55.000 0.00 0.00 34.23 4.75
1581 1649 0.608308 GTGGGTTTCCTACTGGTGCC 60.608 60.000 0.00 0.00 34.23 5.01
1582 1650 0.608308 GGTGGGTTTCCTACTGGTGC 60.608 60.000 2.63 0.00 34.23 5.01
1583 1651 0.768622 TGGTGGGTTTCCTACTGGTG 59.231 55.000 2.63 0.00 34.23 4.17
1584 1652 1.354368 CATGGTGGGTTTCCTACTGGT 59.646 52.381 2.63 0.00 34.23 4.00
1585 1653 1.633432 TCATGGTGGGTTTCCTACTGG 59.367 52.381 0.00 0.00 0.00 4.00
1586 1654 2.941415 GCTCATGGTGGGTTTCCTACTG 60.941 54.545 0.00 0.00 0.00 2.74
1587 1655 1.282157 GCTCATGGTGGGTTTCCTACT 59.718 52.381 0.00 0.00 0.00 2.57
1588 1656 1.004277 TGCTCATGGTGGGTTTCCTAC 59.996 52.381 0.00 0.00 0.00 3.18
1589 1657 1.004277 GTGCTCATGGTGGGTTTCCTA 59.996 52.381 0.00 0.00 0.00 2.94
1590 1658 0.251341 GTGCTCATGGTGGGTTTCCT 60.251 55.000 0.00 0.00 0.00 3.36
1591 1659 0.251341 AGTGCTCATGGTGGGTTTCC 60.251 55.000 0.00 0.00 0.00 3.13
1592 1660 1.168714 GAGTGCTCATGGTGGGTTTC 58.831 55.000 0.00 0.00 0.00 2.78
1593 1661 0.606401 CGAGTGCTCATGGTGGGTTT 60.606 55.000 0.00 0.00 0.00 3.27
1594 1662 1.003355 CGAGTGCTCATGGTGGGTT 60.003 57.895 0.00 0.00 0.00 4.11
1595 1663 2.172483 GACGAGTGCTCATGGTGGGT 62.172 60.000 0.00 0.00 0.00 4.51
1596 1664 1.448540 GACGAGTGCTCATGGTGGG 60.449 63.158 0.00 0.00 0.00 4.61
1597 1665 0.107993 ATGACGAGTGCTCATGGTGG 60.108 55.000 0.00 0.00 0.00 4.61
1598 1666 1.284657 GATGACGAGTGCTCATGGTG 58.715 55.000 0.00 0.00 0.00 4.17
1599 1667 0.179127 CGATGACGAGTGCTCATGGT 60.179 55.000 0.00 0.00 42.66 3.55
1600 1668 0.101219 TCGATGACGAGTGCTCATGG 59.899 55.000 0.00 0.00 43.81 3.66
1601 1669 3.629858 TCGATGACGAGTGCTCATG 57.370 52.632 0.00 0.00 43.81 3.07
1610 1678 0.457443 AATGAGCTGCTCGATGACGA 59.543 50.000 23.35 5.64 46.56 4.20
1611 1679 0.575859 CAATGAGCTGCTCGATGACG 59.424 55.000 23.35 6.12 41.26 4.35
1612 1680 0.304098 GCAATGAGCTGCTCGATGAC 59.696 55.000 27.99 18.80 39.34 3.06
1613 1681 1.149964 CGCAATGAGCTGCTCGATGA 61.150 55.000 27.99 12.88 42.61 2.92
1614 1682 1.275953 CGCAATGAGCTGCTCGATG 59.724 57.895 23.35 22.95 42.61 3.84
1615 1683 1.886313 CCGCAATGAGCTGCTCGAT 60.886 57.895 23.35 15.10 42.61 3.59
1616 1684 2.510012 CCGCAATGAGCTGCTCGA 60.510 61.111 23.35 13.58 42.61 4.04
1617 1685 3.570638 CCCGCAATGAGCTGCTCG 61.571 66.667 23.35 12.37 42.61 5.03
1618 1686 3.207669 CCCCGCAATGAGCTGCTC 61.208 66.667 22.38 22.38 42.61 4.26
1622 1690 3.918253 TTTCGCCCCGCAATGAGCT 62.918 57.895 0.00 0.00 42.61 4.09
1623 1691 2.988688 TTTTCGCCCCGCAATGAGC 61.989 57.895 0.00 0.00 40.87 4.26
1624 1692 1.154035 GTTTTCGCCCCGCAATGAG 60.154 57.895 0.00 0.00 0.00 2.90
1625 1693 2.631580 GGTTTTCGCCCCGCAATGA 61.632 57.895 0.00 0.00 0.00 2.57
1626 1694 2.126110 GGTTTTCGCCCCGCAATG 60.126 61.111 0.00 0.00 0.00 2.82
1627 1695 3.378602 GGGTTTTCGCCCCGCAAT 61.379 61.111 0.00 0.00 42.89 3.56
1634 1702 2.975799 TGTCGCTGGGTTTTCGCC 60.976 61.111 0.00 0.00 0.00 5.54
1635 1703 2.251371 GTGTCGCTGGGTTTTCGC 59.749 61.111 0.00 0.00 0.00 4.70
1636 1704 1.597027 AGGTGTCGCTGGGTTTTCG 60.597 57.895 0.00 0.00 0.00 3.46
1637 1705 0.818040 ACAGGTGTCGCTGGGTTTTC 60.818 55.000 0.00 0.00 0.00 2.29
1638 1706 1.101049 CACAGGTGTCGCTGGGTTTT 61.101 55.000 0.00 0.00 0.00 2.43
1639 1707 1.525995 CACAGGTGTCGCTGGGTTT 60.526 57.895 0.00 0.00 0.00 3.27
1640 1708 1.768684 ATCACAGGTGTCGCTGGGTT 61.769 55.000 0.00 0.00 0.00 4.11
1641 1709 2.172483 GATCACAGGTGTCGCTGGGT 62.172 60.000 0.00 0.00 0.00 4.51
1642 1710 1.448540 GATCACAGGTGTCGCTGGG 60.449 63.158 0.00 0.00 0.00 4.45
1643 1711 1.016130 GTGATCACAGGTGTCGCTGG 61.016 60.000 21.07 0.00 0.00 4.85
1644 1712 1.347097 CGTGATCACAGGTGTCGCTG 61.347 60.000 24.93 1.35 0.00 5.18
1645 1713 1.080501 CGTGATCACAGGTGTCGCT 60.081 57.895 24.93 0.00 0.00 4.93
1646 1714 2.730672 GCGTGATCACAGGTGTCGC 61.731 63.158 24.93 16.52 34.82 5.19
1647 1715 0.943835 TTGCGTGATCACAGGTGTCG 60.944 55.000 24.93 10.65 34.82 4.35
1648 1716 0.512952 GTTGCGTGATCACAGGTGTC 59.487 55.000 24.93 6.79 34.82 3.67
1649 1717 0.884704 GGTTGCGTGATCACAGGTGT 60.885 55.000 24.93 0.00 34.82 4.16
1650 1718 0.603707 AGGTTGCGTGATCACAGGTG 60.604 55.000 24.93 10.10 34.82 4.00
1651 1719 0.973632 TAGGTTGCGTGATCACAGGT 59.026 50.000 24.93 6.09 34.82 4.00
1652 1720 2.315925 ATAGGTTGCGTGATCACAGG 57.684 50.000 24.93 11.17 35.36 4.00
1653 1721 3.068165 TCCTATAGGTTGCGTGATCACAG 59.932 47.826 24.93 17.71 36.34 3.66
1654 1722 3.028130 TCCTATAGGTTGCGTGATCACA 58.972 45.455 24.93 4.19 36.34 3.58
1655 1723 3.728076 TCCTATAGGTTGCGTGATCAC 57.272 47.619 18.51 16.21 36.34 3.06
1656 1724 4.152647 AGATCCTATAGGTTGCGTGATCA 58.847 43.478 18.51 0.00 36.34 2.92
1657 1725 4.792521 AGATCCTATAGGTTGCGTGATC 57.207 45.455 18.51 11.64 36.34 2.92
1658 1726 6.041637 TGTTTAGATCCTATAGGTTGCGTGAT 59.958 38.462 18.51 2.64 36.34 3.06
1659 1727 5.361571 TGTTTAGATCCTATAGGTTGCGTGA 59.638 40.000 18.51 0.00 36.34 4.35
1660 1728 5.462398 GTGTTTAGATCCTATAGGTTGCGTG 59.538 44.000 18.51 0.00 36.34 5.34
1661 1729 5.452917 GGTGTTTAGATCCTATAGGTTGCGT 60.453 44.000 18.51 3.36 36.34 5.24
1662 1730 4.989168 GGTGTTTAGATCCTATAGGTTGCG 59.011 45.833 18.51 0.00 36.34 4.85
1663 1731 5.925509 TGGTGTTTAGATCCTATAGGTTGC 58.074 41.667 18.51 9.05 36.34 4.17
1664 1732 6.992715 CCTTGGTGTTTAGATCCTATAGGTTG 59.007 42.308 18.51 0.00 36.34 3.77
1665 1733 6.906901 TCCTTGGTGTTTAGATCCTATAGGTT 59.093 38.462 18.51 10.47 36.34 3.50
1666 1734 6.449956 TCCTTGGTGTTTAGATCCTATAGGT 58.550 40.000 18.51 6.14 36.34 3.08
1667 1735 6.555360 ACTCCTTGGTGTTTAGATCCTATAGG 59.445 42.308 13.07 13.07 0.00 2.57
1668 1736 7.507616 AGACTCCTTGGTGTTTAGATCCTATAG 59.492 40.741 0.00 0.00 0.00 1.31
1669 1737 7.363031 AGACTCCTTGGTGTTTAGATCCTATA 58.637 38.462 0.00 0.00 0.00 1.31
1670 1738 6.206042 AGACTCCTTGGTGTTTAGATCCTAT 58.794 40.000 0.00 0.00 0.00 2.57
1671 1739 5.590818 AGACTCCTTGGTGTTTAGATCCTA 58.409 41.667 0.00 0.00 0.00 2.94
1672 1740 4.430441 AGACTCCTTGGTGTTTAGATCCT 58.570 43.478 0.00 0.00 0.00 3.24
1673 1741 4.383226 GGAGACTCCTTGGTGTTTAGATCC 60.383 50.000 14.72 0.00 32.53 3.36
1674 1742 4.223032 TGGAGACTCCTTGGTGTTTAGATC 59.777 45.833 22.14 0.00 37.46 2.75
1675 1743 4.168101 TGGAGACTCCTTGGTGTTTAGAT 58.832 43.478 22.14 0.00 37.46 1.98
1676 1744 3.583228 TGGAGACTCCTTGGTGTTTAGA 58.417 45.455 22.14 0.00 37.46 2.10
1677 1745 4.351874 TTGGAGACTCCTTGGTGTTTAG 57.648 45.455 22.14 0.00 37.46 1.85
1678 1746 4.781775 TTTGGAGACTCCTTGGTGTTTA 57.218 40.909 22.14 0.00 37.46 2.01
1679 1747 3.662759 TTTGGAGACTCCTTGGTGTTT 57.337 42.857 22.14 0.00 37.46 2.83
1680 1748 3.555966 CTTTTGGAGACTCCTTGGTGTT 58.444 45.455 22.14 0.00 37.46 3.32
1681 1749 2.158608 CCTTTTGGAGACTCCTTGGTGT 60.159 50.000 22.14 0.00 44.07 4.16
1682 1750 2.106511 TCCTTTTGGAGACTCCTTGGTG 59.893 50.000 22.14 8.51 45.19 4.17
1683 1751 2.418669 TCCTTTTGGAGACTCCTTGGT 58.581 47.619 22.14 0.00 45.19 3.67
1695 1763 2.028876 ACTGTTTCGGGTTCCTTTTGG 58.971 47.619 0.00 0.00 42.21 3.28
1696 1764 2.949644 AGACTGTTTCGGGTTCCTTTTG 59.050 45.455 0.00 0.00 0.00 2.44
1697 1765 3.292492 AGACTGTTTCGGGTTCCTTTT 57.708 42.857 0.00 0.00 0.00 2.27
1698 1766 4.426736 TTAGACTGTTTCGGGTTCCTTT 57.573 40.909 0.00 0.00 0.00 3.11
1699 1767 4.426736 TTTAGACTGTTTCGGGTTCCTT 57.573 40.909 0.00 0.00 0.00 3.36
1700 1768 4.635699 ATTTAGACTGTTTCGGGTTCCT 57.364 40.909 0.00 0.00 0.00 3.36
1701 1769 4.758165 TGAATTTAGACTGTTTCGGGTTCC 59.242 41.667 0.00 0.00 0.00 3.62
1702 1770 5.469084 AGTGAATTTAGACTGTTTCGGGTTC 59.531 40.000 0.00 0.00 0.00 3.62
1703 1771 5.374071 AGTGAATTTAGACTGTTTCGGGTT 58.626 37.500 0.00 0.00 0.00 4.11
1704 1772 4.969484 AGTGAATTTAGACTGTTTCGGGT 58.031 39.130 0.00 0.00 0.00 5.28
1705 1773 6.402226 GCTTAGTGAATTTAGACTGTTTCGGG 60.402 42.308 0.00 0.00 0.00 5.14
1706 1774 6.369065 AGCTTAGTGAATTTAGACTGTTTCGG 59.631 38.462 0.00 0.00 0.00 4.30
1707 1775 7.352719 AGCTTAGTGAATTTAGACTGTTTCG 57.647 36.000 0.00 0.00 0.00 3.46
1709 1777 9.555727 TGTAAGCTTAGTGAATTTAGACTGTTT 57.444 29.630 6.38 0.00 0.00 2.83
1710 1778 9.209175 CTGTAAGCTTAGTGAATTTAGACTGTT 57.791 33.333 6.38 0.00 0.00 3.16
1711 1779 7.819900 CCTGTAAGCTTAGTGAATTTAGACTGT 59.180 37.037 6.38 0.00 0.00 3.55
1712 1780 7.201565 GCCTGTAAGCTTAGTGAATTTAGACTG 60.202 40.741 6.38 0.00 0.00 3.51
1713 1781 6.819146 GCCTGTAAGCTTAGTGAATTTAGACT 59.181 38.462 6.38 0.00 0.00 3.24
1714 1782 6.819146 AGCCTGTAAGCTTAGTGAATTTAGAC 59.181 38.462 6.38 0.00 41.41 2.59
1715 1783 6.947464 AGCCTGTAAGCTTAGTGAATTTAGA 58.053 36.000 6.38 0.00 41.41 2.10
1716 1784 6.818644 TGAGCCTGTAAGCTTAGTGAATTTAG 59.181 38.462 6.38 0.00 45.15 1.85
1717 1785 6.594159 GTGAGCCTGTAAGCTTAGTGAATTTA 59.406 38.462 6.38 0.00 45.15 1.40
1718 1786 5.412904 GTGAGCCTGTAAGCTTAGTGAATTT 59.587 40.000 6.38 0.00 45.15 1.82
1719 1787 4.938226 GTGAGCCTGTAAGCTTAGTGAATT 59.062 41.667 6.38 0.00 45.15 2.17
1720 1788 4.020218 TGTGAGCCTGTAAGCTTAGTGAAT 60.020 41.667 6.38 0.00 45.15 2.57
1721 1789 3.323691 TGTGAGCCTGTAAGCTTAGTGAA 59.676 43.478 6.38 0.00 45.15 3.18
1722 1790 2.897326 TGTGAGCCTGTAAGCTTAGTGA 59.103 45.455 6.38 0.00 45.15 3.41
1723 1791 3.319137 TGTGAGCCTGTAAGCTTAGTG 57.681 47.619 6.38 2.60 45.15 2.74
1724 1792 4.351874 TTTGTGAGCCTGTAAGCTTAGT 57.648 40.909 6.38 0.00 45.15 2.24
1725 1793 4.997395 TCTTTTGTGAGCCTGTAAGCTTAG 59.003 41.667 6.38 0.00 45.15 2.18
1726 1794 4.968259 TCTTTTGTGAGCCTGTAAGCTTA 58.032 39.130 0.86 0.86 45.15 3.09
1727 1795 3.817647 CTCTTTTGTGAGCCTGTAAGCTT 59.182 43.478 3.48 3.48 45.15 3.74
1729 1797 3.820777 CTCTTTTGTGAGCCTGTAAGC 57.179 47.619 0.00 0.00 0.00 3.09
1738 1806 2.159599 GCTCGGATTGCTCTTTTGTGAG 60.160 50.000 0.00 0.00 37.16 3.51
1739 1807 1.806542 GCTCGGATTGCTCTTTTGTGA 59.193 47.619 0.00 0.00 0.00 3.58
1740 1808 1.536766 TGCTCGGATTGCTCTTTTGTG 59.463 47.619 0.00 0.00 0.00 3.33
1741 1809 1.537202 GTGCTCGGATTGCTCTTTTGT 59.463 47.619 0.00 0.00 0.00 2.83
1742 1810 1.808945 AGTGCTCGGATTGCTCTTTTG 59.191 47.619 0.00 0.00 31.32 2.44
1743 1811 2.079925 GAGTGCTCGGATTGCTCTTTT 58.920 47.619 0.00 0.00 34.90 2.27
1744 1812 1.731720 GAGTGCTCGGATTGCTCTTT 58.268 50.000 0.00 0.00 34.90 2.52
1745 1813 3.450028 GAGTGCTCGGATTGCTCTT 57.550 52.632 0.00 0.00 34.90 2.85
1756 1824 4.427661 ACTCCTGCGCGAGTGCTC 62.428 66.667 12.10 0.00 41.60 4.26
1760 1828 1.373497 CTTTCACTCCTGCGCGAGT 60.373 57.895 12.10 11.60 44.03 4.18
1761 1829 2.097038 CCTTTCACTCCTGCGCGAG 61.097 63.158 12.10 10.34 35.88 5.03
1762 1830 2.048222 CCTTTCACTCCTGCGCGA 60.048 61.111 12.10 0.00 0.00 5.87
1763 1831 3.793144 GCCTTTCACTCCTGCGCG 61.793 66.667 0.00 0.00 0.00 6.86
1764 1832 2.669569 TGCCTTTCACTCCTGCGC 60.670 61.111 0.00 0.00 0.00 6.09
1765 1833 2.684843 GCTGCCTTTCACTCCTGCG 61.685 63.158 0.00 0.00 0.00 5.18
1766 1834 2.338785 GGCTGCCTTTCACTCCTGC 61.339 63.158 12.43 0.00 0.00 4.85
1767 1835 0.615331 TAGGCTGCCTTTCACTCCTG 59.385 55.000 28.55 0.00 34.61 3.86
1768 1836 1.488393 GATAGGCTGCCTTTCACTCCT 59.512 52.381 28.55 0.88 34.61 3.69
1769 1837 1.475930 GGATAGGCTGCCTTTCACTCC 60.476 57.143 31.16 22.30 34.10 3.85
1770 1838 1.475930 GGGATAGGCTGCCTTTCACTC 60.476 57.143 31.16 19.81 33.26 3.51
1771 1839 0.548510 GGGATAGGCTGCCTTTCACT 59.451 55.000 31.16 10.72 33.26 3.41
1772 1840 0.548510 AGGGATAGGCTGCCTTTCAC 59.451 55.000 31.16 29.48 44.73 3.18
1773 1841 0.548031 CAGGGATAGGCTGCCTTTCA 59.452 55.000 31.16 15.52 44.73 2.69
1774 1842 0.839946 TCAGGGATAGGCTGCCTTTC 59.160 55.000 28.55 26.67 44.73 2.62
1775 1843 0.548510 GTCAGGGATAGGCTGCCTTT 59.451 55.000 28.55 19.88 44.73 3.11
1776 1844 0.621571 TGTCAGGGATAGGCTGCCTT 60.622 55.000 28.55 14.60 44.73 4.35
1778 1846 1.050988 TCTGTCAGGGATAGGCTGCC 61.051 60.000 11.65 11.65 35.03 4.85
1779 1847 0.105778 GTCTGTCAGGGATAGGCTGC 59.894 60.000 0.00 0.00 0.00 5.25
1780 1848 0.387202 CGTCTGTCAGGGATAGGCTG 59.613 60.000 0.00 0.00 0.00 4.85
1781 1849 0.259065 TCGTCTGTCAGGGATAGGCT 59.741 55.000 0.00 0.00 0.00 4.58
1782 1850 0.671251 CTCGTCTGTCAGGGATAGGC 59.329 60.000 0.00 0.00 0.00 3.93
1783 1851 2.350057 TCTCGTCTGTCAGGGATAGG 57.650 55.000 0.00 0.00 0.00 2.57
1784 1852 3.283751 AGTTCTCGTCTGTCAGGGATAG 58.716 50.000 0.00 0.00 0.00 2.08
1785 1853 3.280295 GAGTTCTCGTCTGTCAGGGATA 58.720 50.000 0.00 0.00 0.00 2.59
1786 1854 2.096248 GAGTTCTCGTCTGTCAGGGAT 58.904 52.381 0.00 0.00 0.00 3.85
1787 1855 1.535833 GAGTTCTCGTCTGTCAGGGA 58.464 55.000 0.00 0.00 0.00 4.20
1788 1856 0.169230 CGAGTTCTCGTCTGTCAGGG 59.831 60.000 13.18 0.00 0.00 4.45
1789 1857 1.157585 TCGAGTTCTCGTCTGTCAGG 58.842 55.000 19.26 0.00 0.00 3.86
1790 1858 2.845486 CTTCGAGTTCTCGTCTGTCAG 58.155 52.381 19.26 0.00 0.00 3.51
1791 1859 1.069159 GCTTCGAGTTCTCGTCTGTCA 60.069 52.381 19.26 0.00 0.00 3.58
1792 1860 1.198178 AGCTTCGAGTTCTCGTCTGTC 59.802 52.381 19.26 7.87 0.00 3.51
1793 1861 1.240256 AGCTTCGAGTTCTCGTCTGT 58.760 50.000 19.26 3.83 0.00 3.41
1794 1862 2.246789 GAAGCTTCGAGTTCTCGTCTG 58.753 52.381 19.26 12.44 0.00 3.51
1795 1863 2.622546 GAAGCTTCGAGTTCTCGTCT 57.377 50.000 19.26 12.88 0.00 4.18
1807 1875 2.886081 TCTGCATCTCTTCGAAGCTTC 58.114 47.619 20.56 16.84 37.26 3.86
1808 1876 3.260740 CTTCTGCATCTCTTCGAAGCTT 58.739 45.455 20.56 0.00 37.26 3.74
1809 1877 2.418471 CCTTCTGCATCTCTTCGAAGCT 60.418 50.000 20.56 4.67 37.26 3.74
1810 1878 1.932511 CCTTCTGCATCTCTTCGAAGC 59.067 52.381 20.56 9.79 36.90 3.86
1811 1879 2.167281 TCCCTTCTGCATCTCTTCGAAG 59.833 50.000 19.35 19.35 0.00 3.79
1812 1880 2.179427 TCCCTTCTGCATCTCTTCGAA 58.821 47.619 0.00 0.00 0.00 3.71
1813 1881 1.852633 TCCCTTCTGCATCTCTTCGA 58.147 50.000 0.00 0.00 0.00 3.71
1814 1882 2.102084 TGATCCCTTCTGCATCTCTTCG 59.898 50.000 0.00 0.00 0.00 3.79
1815 1883 3.134442 ACTGATCCCTTCTGCATCTCTTC 59.866 47.826 0.00 0.00 0.00 2.87
1816 1884 3.113824 ACTGATCCCTTCTGCATCTCTT 58.886 45.455 0.00 0.00 0.00 2.85
1817 1885 2.761809 ACTGATCCCTTCTGCATCTCT 58.238 47.619 0.00 0.00 0.00 3.10
1818 1886 3.465871 GAACTGATCCCTTCTGCATCTC 58.534 50.000 0.00 0.00 0.00 2.75
1819 1887 2.158986 CGAACTGATCCCTTCTGCATCT 60.159 50.000 0.00 0.00 0.00 2.90
1820 1888 2.159043 TCGAACTGATCCCTTCTGCATC 60.159 50.000 0.00 0.00 0.00 3.91
1821 1889 1.833630 TCGAACTGATCCCTTCTGCAT 59.166 47.619 0.00 0.00 0.00 3.96
1822 1890 1.266178 TCGAACTGATCCCTTCTGCA 58.734 50.000 0.00 0.00 0.00 4.41
1823 1891 2.275318 CTTCGAACTGATCCCTTCTGC 58.725 52.381 0.00 0.00 0.00 4.26
1824 1892 2.093764 AGCTTCGAACTGATCCCTTCTG 60.094 50.000 0.00 0.00 0.00 3.02
1825 1893 2.093764 CAGCTTCGAACTGATCCCTTCT 60.094 50.000 17.52 0.00 37.32 2.85
1826 1894 2.093973 TCAGCTTCGAACTGATCCCTTC 60.094 50.000 19.73 0.00 39.21 3.46
1827 1895 1.902508 TCAGCTTCGAACTGATCCCTT 59.097 47.619 19.73 0.00 39.21 3.95
1828 1896 1.480137 CTCAGCTTCGAACTGATCCCT 59.520 52.381 22.20 0.00 42.99 4.20
1829 1897 1.205893 ACTCAGCTTCGAACTGATCCC 59.794 52.381 22.20 0.00 42.99 3.85
1830 1898 2.663826 ACTCAGCTTCGAACTGATCC 57.336 50.000 22.20 0.00 42.99 3.36
1831 1899 2.670414 CCAACTCAGCTTCGAACTGATC 59.330 50.000 22.20 0.00 42.99 2.92
1832 1900 2.037772 ACCAACTCAGCTTCGAACTGAT 59.962 45.455 22.20 11.80 42.99 2.90
1833 1901 1.412710 ACCAACTCAGCTTCGAACTGA 59.587 47.619 21.26 21.26 41.78 3.41
1834 1902 1.871080 ACCAACTCAGCTTCGAACTG 58.129 50.000 16.74 16.74 36.44 3.16
1835 1903 2.213499 CAACCAACTCAGCTTCGAACT 58.787 47.619 0.00 0.00 0.00 3.01
1836 1904 1.264288 CCAACCAACTCAGCTTCGAAC 59.736 52.381 0.00 0.00 0.00 3.95
1837 1905 1.140052 TCCAACCAACTCAGCTTCGAA 59.860 47.619 0.00 0.00 0.00 3.71
1838 1906 0.756294 TCCAACCAACTCAGCTTCGA 59.244 50.000 0.00 0.00 0.00 3.71
1839 1907 1.151668 CTCCAACCAACTCAGCTTCG 58.848 55.000 0.00 0.00 0.00 3.79
1840 1908 0.877743 GCTCCAACCAACTCAGCTTC 59.122 55.000 0.00 0.00 0.00 3.86
1841 1909 0.538287 GGCTCCAACCAACTCAGCTT 60.538 55.000 0.00 0.00 0.00 3.74
1842 1910 1.073897 GGCTCCAACCAACTCAGCT 59.926 57.895 0.00 0.00 0.00 4.24
1843 1911 2.328099 CGGCTCCAACCAACTCAGC 61.328 63.158 0.00 0.00 0.00 4.26
1844 1912 2.328099 GCGGCTCCAACCAACTCAG 61.328 63.158 0.00 0.00 0.00 3.35
1845 1913 2.281484 GCGGCTCCAACCAACTCA 60.281 61.111 0.00 0.00 0.00 3.41
1846 1914 3.423154 CGCGGCTCCAACCAACTC 61.423 66.667 0.00 0.00 0.00 3.01
1852 1920 3.100862 GAATCTGCGCGGCTCCAAC 62.101 63.158 12.58 0.00 0.00 3.77
1853 1921 2.819595 GAATCTGCGCGGCTCCAA 60.820 61.111 12.58 0.00 0.00 3.53
1854 1922 3.723235 GAGAATCTGCGCGGCTCCA 62.723 63.158 12.58 0.00 0.00 3.86
1855 1923 2.964389 GAGAATCTGCGCGGCTCC 60.964 66.667 12.58 2.23 0.00 4.70
1856 1924 1.555741 GATGAGAATCTGCGCGGCTC 61.556 60.000 12.58 13.18 34.92 4.70
1857 1925 1.593750 GATGAGAATCTGCGCGGCT 60.594 57.895 12.58 2.32 34.92 5.52
1858 1926 1.226686 ATGATGAGAATCTGCGCGGC 61.227 55.000 12.58 0.00 34.92 6.53
1859 1927 0.788995 GATGATGAGAATCTGCGCGG 59.211 55.000 10.86 10.86 34.92 6.46
1860 1928 1.494824 TGATGATGAGAATCTGCGCG 58.505 50.000 0.00 0.00 34.92 6.86
1861 1929 2.092368 CGATGATGATGAGAATCTGCGC 59.908 50.000 0.00 0.00 34.92 6.09
1862 1930 3.572584 TCGATGATGATGAGAATCTGCG 58.427 45.455 0.00 0.00 34.92 5.18
1863 1931 4.143073 GCTTCGATGATGATGAGAATCTGC 60.143 45.833 1.89 0.00 34.92 4.26
1864 1932 4.989168 TGCTTCGATGATGATGAGAATCTG 59.011 41.667 1.89 0.00 34.92 2.90
1865 1933 4.989797 GTGCTTCGATGATGATGAGAATCT 59.010 41.667 1.89 0.00 34.92 2.40
1866 1934 4.989797 AGTGCTTCGATGATGATGAGAATC 59.010 41.667 1.89 0.00 0.00 2.52
1867 1935 4.750598 CAGTGCTTCGATGATGATGAGAAT 59.249 41.667 1.89 0.00 0.00 2.40
1868 1936 4.117685 CAGTGCTTCGATGATGATGAGAA 58.882 43.478 1.89 0.00 0.00 2.87
1869 1937 3.492137 CCAGTGCTTCGATGATGATGAGA 60.492 47.826 1.89 0.00 0.00 3.27
1870 1938 2.801111 CCAGTGCTTCGATGATGATGAG 59.199 50.000 1.89 0.00 0.00 2.90
1871 1939 2.431782 TCCAGTGCTTCGATGATGATGA 59.568 45.455 1.89 0.00 0.00 2.92
1872 1940 2.543012 GTCCAGTGCTTCGATGATGATG 59.457 50.000 1.89 0.00 0.00 3.07
1873 1941 2.484417 GGTCCAGTGCTTCGATGATGAT 60.484 50.000 1.89 0.00 0.00 2.45
1874 1942 1.134699 GGTCCAGTGCTTCGATGATGA 60.135 52.381 1.89 0.00 0.00 2.92
1875 1943 1.134580 AGGTCCAGTGCTTCGATGATG 60.135 52.381 1.89 0.00 0.00 3.07
1876 1944 1.134580 CAGGTCCAGTGCTTCGATGAT 60.135 52.381 1.89 0.00 0.00 2.45
1877 1945 0.247460 CAGGTCCAGTGCTTCGATGA 59.753 55.000 1.89 0.00 0.00 2.92
1878 1946 0.247460 TCAGGTCCAGTGCTTCGATG 59.753 55.000 0.00 0.00 0.00 3.84
1879 1947 0.534412 CTCAGGTCCAGTGCTTCGAT 59.466 55.000 0.00 0.00 0.00 3.59
1880 1948 1.967535 CTCAGGTCCAGTGCTTCGA 59.032 57.895 0.00 0.00 0.00 3.71
1881 1949 1.739562 GCTCAGGTCCAGTGCTTCG 60.740 63.158 1.35 0.00 0.00 3.79
1882 1950 0.035630 ATGCTCAGGTCCAGTGCTTC 60.036 55.000 9.40 0.00 0.00 3.86
1883 1951 0.035630 GATGCTCAGGTCCAGTGCTT 60.036 55.000 9.40 3.58 0.00 3.91
1884 1952 0.908656 AGATGCTCAGGTCCAGTGCT 60.909 55.000 9.40 0.00 0.00 4.40
1885 1953 0.035630 AAGATGCTCAGGTCCAGTGC 60.036 55.000 1.59 1.59 0.00 4.40
1886 1954 1.678123 CCAAGATGCTCAGGTCCAGTG 60.678 57.143 0.00 0.00 0.00 3.66
1887 1955 0.617413 CCAAGATGCTCAGGTCCAGT 59.383 55.000 0.00 0.00 0.00 4.00
1888 1956 0.747283 GCCAAGATGCTCAGGTCCAG 60.747 60.000 0.00 0.00 0.00 3.86
1889 1957 1.203441 AGCCAAGATGCTCAGGTCCA 61.203 55.000 0.00 0.00 36.75 4.02
1890 1958 1.606531 AGCCAAGATGCTCAGGTCC 59.393 57.895 0.00 0.00 36.75 4.46
1913 1981 8.934507 ATTACGATAGATAAAAGCTATGGAGC 57.065 34.615 0.00 0.00 44.91 4.70
1946 2014 4.023878 TCCTAACACACCGCATAAACAAAC 60.024 41.667 0.00 0.00 0.00 2.93
1947 2015 4.135306 TCCTAACACACCGCATAAACAAA 58.865 39.130 0.00 0.00 0.00 2.83
2059 2129 0.326264 GAAAAGAGGGAGCTGAGGCA 59.674 55.000 0.00 0.00 41.70 4.75
2092 2162 8.082852 AGGTCATTAAGAAGCATATGTACTACG 58.917 37.037 4.29 0.00 0.00 3.51
2093 2163 9.765795 AAGGTCATTAAGAAGCATATGTACTAC 57.234 33.333 4.29 0.00 0.00 2.73
2260 2347 2.620585 GCCTGCAAAAGACTTTCAGAGT 59.379 45.455 15.00 0.00 42.70 3.24
2297 2384 0.390472 CCAAGGTCAAGAGAGACGGC 60.390 60.000 0.00 0.00 39.42 5.68
2300 2387 1.346068 AGTGCCAAGGTCAAGAGAGAC 59.654 52.381 0.00 0.00 37.80 3.36
2375 2463 6.430000 AGTTACCTCAATGTGAACATGTAACC 59.570 38.462 20.08 10.32 39.84 2.85
2394 2482 2.906354 CCAGTAGCACCATCAGTTACC 58.094 52.381 0.00 0.00 0.00 2.85
2440 2528 0.543410 TTGGCCCTCCTGTCTTCGTA 60.543 55.000 0.00 0.00 0.00 3.43
2443 2531 1.467920 CATTTGGCCCTCCTGTCTTC 58.532 55.000 0.00 0.00 0.00 2.87
2464 2552 3.006003 GCTACTACCTTAGCCTGATGGAC 59.994 52.174 0.00 0.00 38.91 4.02
2539 2627 2.158755 AGCAACTTGTTAGGCTGTCACT 60.159 45.455 0.00 0.00 34.83 3.41
2540 2628 2.222027 AGCAACTTGTTAGGCTGTCAC 58.778 47.619 0.00 0.00 34.83 3.67
2583 2671 8.816640 ATTTCTGCACTTTATTGTTTAACAGG 57.183 30.769 0.00 0.00 0.00 4.00
2630 2719 3.871485 CAGATCTAAGGCAGCAGAAAGT 58.129 45.455 0.00 0.00 0.00 2.66
2657 2746 6.947158 AGGAATCAATCTCTTTCTTTGCTTCT 59.053 34.615 0.00 0.00 30.32 2.85
2696 2785 3.942748 CCAAATCTGCAAATGAAATGGGG 59.057 43.478 0.00 0.00 0.00 4.96
2700 2789 5.486735 TGGACCAAATCTGCAAATGAAAT 57.513 34.783 0.00 0.00 0.00 2.17
2718 2807 4.717279 TTAGCATACCCCCTATTTGGAC 57.283 45.455 0.00 0.00 38.35 4.02
2743 2841 5.994054 ACACACACAGATCATATGGCTAATC 59.006 40.000 2.13 0.00 0.00 1.75
2750 2848 5.111293 TGCAGTACACACACAGATCATATG 58.889 41.667 0.00 0.00 0.00 1.78
2751 2849 5.343307 TGCAGTACACACACAGATCATAT 57.657 39.130 0.00 0.00 0.00 1.78
2765 2863 6.826741 TGAGTATACATCAGTAGTGCAGTACA 59.173 38.462 28.82 13.28 32.86 2.90
2768 2866 6.775594 TTGAGTATACATCAGTAGTGCAGT 57.224 37.500 5.50 0.00 32.86 4.40
2769 2867 9.750125 TTATTTGAGTATACATCAGTAGTGCAG 57.250 33.333 5.50 0.00 32.86 4.41
2794 2892 1.751924 TGCTGTTGCGGGTAAAAGTTT 59.248 42.857 0.00 0.00 43.34 2.66
2795 2893 1.394618 TGCTGTTGCGGGTAAAAGTT 58.605 45.000 0.00 0.00 43.34 2.66
2835 2933 0.179129 CAATGGCCGCATCAAGGAAC 60.179 55.000 0.00 0.00 0.00 3.62
2886 2984 1.471684 CCGTATGCCGAGTATAGGGTC 59.528 57.143 10.41 0.00 39.56 4.46
2898 2996 1.654023 GCCCACTTGAACCGTATGCC 61.654 60.000 0.00 0.00 0.00 4.40
2940 3038 2.435059 GAACAGACAGGCTCCGGC 60.435 66.667 0.00 0.00 37.82 6.13
2947 3045 5.762218 ACAGAAGAAGAAATGAACAGACAGG 59.238 40.000 0.00 0.00 0.00 4.00
2979 3077 7.147776 ACCGACTTGTATATTAGCAAACTAGGT 60.148 37.037 0.00 0.00 0.00 3.08
3002 3100 3.621268 CCCACTACAATGAATGTGTACCG 59.379 47.826 0.00 0.00 43.77 4.02
3004 3102 4.585879 ACCCCACTACAATGAATGTGTAC 58.414 43.478 0.00 0.00 43.77 2.90
3188 3300 9.847224 AAAAGTGATCTGTAACTAAAGGAGAAA 57.153 29.630 0.00 0.00 0.00 2.52
3198 3310 9.220767 GTCCAATAGAAAAAGTGATCTGTAACT 57.779 33.333 0.00 0.00 0.00 2.24
3200 3312 9.219603 CAGTCCAATAGAAAAAGTGATCTGTAA 57.780 33.333 0.00 0.00 0.00 2.41
3203 3315 6.149973 TGCAGTCCAATAGAAAAAGTGATCTG 59.850 38.462 0.00 0.00 0.00 2.90
3229 3341 6.483640 ACTGGTTAGACTGAAATCACAACTTC 59.516 38.462 0.00 0.00 0.00 3.01
3233 3345 6.183361 TGGTACTGGTTAGACTGAAATCACAA 60.183 38.462 0.00 0.00 0.00 3.33
3253 3365 4.442192 CCTGCAGTAGAATTCTCCTGGTAC 60.442 50.000 24.49 11.83 31.47 3.34
3873 3985 3.809905 CCTGAACCTAGGTAAATCTGGC 58.190 50.000 16.67 0.00 32.99 4.85
3966 4078 7.197017 CGCAATATCTTATATAAGCCGAGACT 58.803 38.462 16.37 0.21 33.40 3.24
4235 4350 4.451900 CAGTTTAGGGGCTACTAATGGTG 58.548 47.826 3.70 0.20 33.31 4.17
4359 4474 0.535102 AGGAGGTCGGCAACAAACAG 60.535 55.000 0.00 0.00 0.00 3.16
4379 4494 2.760385 AGGGAGCAGACCGGCTAC 60.760 66.667 0.00 0.00 45.99 3.58
4428 4543 5.649782 AATCGGCAATTCAAGATCAAACT 57.350 34.783 0.00 0.00 0.00 2.66
4502 4622 4.357018 AATTTTTCCTCGAGAAATCGGC 57.643 40.909 15.71 0.00 43.93 5.54
4503 4623 6.024049 CAGAAATTTTTCCTCGAGAAATCGG 58.976 40.000 15.71 0.00 43.93 4.18
4504 4624 6.831769 TCAGAAATTTTTCCTCGAGAAATCG 58.168 36.000 15.71 0.00 43.93 3.34
4505 4625 8.454106 TCATCAGAAATTTTTCCTCGAGAAATC 58.546 33.333 15.71 7.17 43.93 2.17
4506 4626 8.239998 GTCATCAGAAATTTTTCCTCGAGAAAT 58.760 33.333 15.71 9.34 43.93 2.17
4570 4690 1.144057 GTCCATAGTGCAGGACGGG 59.856 63.158 7.06 0.00 44.23 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.