Multiple sequence alignment - TraesCS2A01G433800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G433800 chr2A 100.000 3054 0 0 1 3054 686796160 686799213 0.000000e+00 5640.0
1 TraesCS2A01G433800 chr2A 88.000 175 21 0 1393 1567 686704301 686704127 1.110000e-49 207.0
2 TraesCS2A01G433800 chr2A 89.172 157 17 0 1411 1567 686777750 686777594 2.400000e-46 196.0
3 TraesCS2A01G433800 chr2A 85.792 183 24 2 1703 1884 686704003 686703822 3.110000e-45 193.0
4 TraesCS2A01G433800 chr2D 93.357 1400 47 15 756 2128 544259221 544260601 0.000000e+00 2028.0
5 TraesCS2A01G433800 chr2D 85.383 561 42 25 168 719 544258703 544259232 2.070000e-151 545.0
6 TraesCS2A01G433800 chr2D 90.909 176 13 3 1 175 544256750 544256923 1.830000e-57 233.0
7 TraesCS2A01G433800 chr2D 86.567 201 27 0 2854 3054 544321701 544321901 3.960000e-54 222.0
8 TraesCS2A01G433800 chr2D 91.824 159 11 1 2137 2295 544260647 544260803 1.430000e-53 220.0
9 TraesCS2A01G433800 chr2D 85.792 183 24 2 1703 1884 543846897 543846716 3.110000e-45 193.0
10 TraesCS2A01G433800 chr2D 88.535 157 18 0 1411 1567 543847197 543847041 1.120000e-44 191.0
11 TraesCS2A01G433800 chr2D 83.246 191 30 2 1703 1892 544170835 544170646 1.130000e-39 174.0
12 TraesCS2A01G433800 chr2D 96.875 32 1 0 2556 2587 99912274 99912243 2.000000e-03 54.7
13 TraesCS2A01G433800 chr2B 91.930 1487 63 28 662 2128 649669468 649670917 0.000000e+00 2028.0
14 TraesCS2A01G433800 chr2B 86.667 555 61 10 1 549 649667120 649667667 1.210000e-168 603.0
15 TraesCS2A01G433800 chr2B 86.809 235 27 1 2820 3054 649683781 649683551 3.020000e-65 259.0
16 TraesCS2A01G433800 chr2B 86.286 175 24 0 1393 1567 649480172 649479998 1.120000e-44 191.0
17 TraesCS2A01G433800 chr2B 85.246 183 25 2 1703 1884 649479852 649479671 1.450000e-43 187.0
18 TraesCS2A01G433800 chr2B 91.579 95 8 0 2208 2302 649679501 649679595 6.870000e-27 132.0
19 TraesCS2A01G433800 chr2B 91.026 78 6 1 2137 2213 649670963 649671040 1.500000e-18 104.0
20 TraesCS2A01G433800 chr6D 87.363 182 19 4 1701 1880 426984498 426984677 3.990000e-49 206.0
21 TraesCS2A01G433800 chr6D 88.050 159 19 0 1409 1567 426984319 426984477 4.020000e-44 189.0
22 TraesCS2A01G433800 chr6A 88.050 159 19 0 1409 1567 571683429 571683587 4.020000e-44 189.0
23 TraesCS2A01G433800 chr6B 87.421 159 20 0 1409 1567 642724533 642724691 1.870000e-42 183.0
24 TraesCS2A01G433800 chr7B 74.530 479 88 29 1411 1876 581395684 581395227 8.700000e-41 178.0
25 TraesCS2A01G433800 chr7B 85.714 84 12 0 119 202 732603780 732603697 4.190000e-14 89.8
26 TraesCS2A01G433800 chr7B 91.304 46 4 0 2545 2590 384387348 384387303 2.540000e-06 63.9
27 TraesCS2A01G433800 chr7B 100.000 28 0 0 2563 2590 12198331 12198304 6.000000e-03 52.8
28 TraesCS2A01G433800 chr3B 86.986 146 18 1 66 211 818801208 818801352 2.440000e-36 163.0
29 TraesCS2A01G433800 chr3B 94.286 35 2 0 2556 2590 28084837 28084803 2.000000e-03 54.7
30 TraesCS2A01G433800 chr5A 80.328 183 30 4 19 199 632673404 632673582 1.910000e-27 134.0
31 TraesCS2A01G433800 chr5A 83.000 100 16 1 2488 2587 568150825 568150923 4.190000e-14 89.8
32 TraesCS2A01G433800 chr7D 80.571 175 24 8 1707 1876 538895028 538894859 3.200000e-25 126.0
33 TraesCS2A01G433800 chr7D 88.636 44 5 0 2547 2590 185920642 185920685 2.000000e-03 54.7
34 TraesCS2A01G433800 chr4B 100.000 32 0 0 2556 2587 339160639 339160608 3.290000e-05 60.2
35 TraesCS2A01G433800 chr1A 100.000 28 0 0 2560 2587 460842834 460842861 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G433800 chr2A 686796160 686799213 3053 False 5640.000000 5640 100.000000 1 3054 1 chr2A.!!$F1 3053
1 TraesCS2A01G433800 chr2D 544256750 544260803 4053 False 756.500000 2028 90.368250 1 2295 4 chr2D.!!$F2 2294
2 TraesCS2A01G433800 chr2B 649667120 649671040 3920 False 911.666667 2028 89.874333 1 2213 3 chr2B.!!$F2 2212


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.904649 ACGCTTGATGATGTGGAGGA 59.095 50.0 0.0 0.0 0.0 3.71 F
1397 4983 0.397941 TGCAGTTCTTGTCTGAGGGG 59.602 55.0 0.0 0.0 35.2 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1679 5265 0.107800 ACGCTGCAGAGCATCAAGAT 60.108 50.0 20.43 0.0 46.62 2.40 R
2472 6095 0.030638 ATTTGTGTGCACTTCCACGC 59.969 50.0 19.41 0.0 44.34 5.34 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 0.904649 ACGCTTGATGATGTGGAGGA 59.095 50.000 0.00 0.00 0.00 3.71
32 33 1.293924 CGCTTGATGATGTGGAGGAC 58.706 55.000 0.00 0.00 0.00 3.85
35 36 2.274437 CTTGATGATGTGGAGGACGTG 58.726 52.381 0.00 0.00 0.00 4.49
66 68 9.983024 TGATGGAAAGTGGGAAGTTAATTATTA 57.017 29.630 0.00 0.00 0.00 0.98
83 85 2.761392 TTACATGCGCTTGATGATGC 57.239 45.000 27.85 0.00 0.00 3.91
117 119 5.511716 GCATGGGCATTTAAATGGATGATGA 60.512 40.000 25.61 0.00 40.72 2.92
122 124 6.463331 GGGCATTTAAATGGATGATGACATGT 60.463 38.462 25.61 0.00 35.55 3.21
129 131 2.510800 TGGATGATGACATGTGTGGGAT 59.489 45.455 1.15 0.00 36.82 3.85
165 167 6.713903 AGGTGGATAGATTGCATGTTAAGATG 59.286 38.462 8.21 8.21 0.00 2.90
200 1989 9.936329 AGTGGGGATGAACTTTTTATGTATAAT 57.064 29.630 0.00 0.00 0.00 1.28
324 2120 8.998377 GCCAAATGTTTAACAAAAACCATATCT 58.002 29.630 0.66 0.00 0.00 1.98
364 2160 5.890334 TGAAAACAAACTTCAGTGTCCATC 58.110 37.500 0.00 0.00 0.00 3.51
377 2173 2.947652 GTGTCCATCCCATCACAATCAG 59.052 50.000 0.00 0.00 0.00 2.90
379 2175 1.565288 TCCATCCCATCACAATCAGCA 59.435 47.619 0.00 0.00 0.00 4.41
380 2176 1.679680 CCATCCCATCACAATCAGCAC 59.320 52.381 0.00 0.00 0.00 4.40
381 2177 2.651455 CATCCCATCACAATCAGCACT 58.349 47.619 0.00 0.00 0.00 4.40
393 2189 7.700505 TCACAATCAGCACTCAATTATTCATC 58.299 34.615 0.00 0.00 0.00 2.92
471 2267 5.662674 ACAACTCCTTAGTACAGATCCAC 57.337 43.478 0.00 0.00 33.75 4.02
492 2288 5.595542 CCACTTGAACACATATCCATTCCAT 59.404 40.000 0.00 0.00 0.00 3.41
539 2335 8.616076 CAATACCTATTCATTTCAGTCCAACTC 58.384 37.037 0.00 0.00 0.00 3.01
568 2364 8.882415 ATTGATTTGCATATCCATTTCAGTTC 57.118 30.769 13.67 0.00 0.00 3.01
569 2365 7.407393 TGATTTGCATATCCATTTCAGTTCA 57.593 32.000 13.67 0.00 0.00 3.18
570 2366 8.014070 TGATTTGCATATCCATTTCAGTTCAT 57.986 30.769 13.67 0.00 0.00 2.57
571 2367 9.134055 TGATTTGCATATCCATTTCAGTTCATA 57.866 29.630 13.67 0.00 0.00 2.15
574 2370 9.970395 TTTGCATATCCATTTCAGTTCATATTC 57.030 29.630 0.00 0.00 0.00 1.75
575 2371 8.694581 TGCATATCCATTTCAGTTCATATTCA 57.305 30.769 0.00 0.00 0.00 2.57
576 2372 9.304335 TGCATATCCATTTCAGTTCATATTCAT 57.696 29.630 0.00 0.00 0.00 2.57
582 2378 8.192774 TCCATTTCAGTTCATATTCATTTCAGC 58.807 33.333 0.00 0.00 0.00 4.26
583 2379 7.977293 CCATTTCAGTTCATATTCATTTCAGCA 59.023 33.333 0.00 0.00 0.00 4.41
584 2380 9.361315 CATTTCAGTTCATATTCATTTCAGCAA 57.639 29.630 0.00 0.00 0.00 3.91
585 2381 9.932207 ATTTCAGTTCATATTCATTTCAGCAAA 57.068 25.926 0.00 0.00 0.00 3.68
586 2382 9.761504 TTTCAGTTCATATTCATTTCAGCAAAA 57.238 25.926 0.00 0.00 0.00 2.44
634 2431 1.445582 GAGGGAACTGTACACGCGG 60.446 63.158 12.47 1.27 44.43 6.46
656 2453 4.658786 ACTCCAGTTCGGGCCCCT 62.659 66.667 18.66 4.30 34.36 4.79
657 2454 3.787001 CTCCAGTTCGGGCCCCTC 61.787 72.222 18.66 6.81 34.36 4.30
658 2455 4.649705 TCCAGTTCGGGCCCCTCA 62.650 66.667 18.66 0.00 34.36 3.86
659 2456 3.411517 CCAGTTCGGGCCCCTCAT 61.412 66.667 18.66 0.00 0.00 2.90
849 4408 1.144936 GGGCTGTCATTCTCCTCCG 59.855 63.158 0.00 0.00 0.00 4.63
886 4452 1.359130 CCTTCTTCATTCCCCCAACCT 59.641 52.381 0.00 0.00 0.00 3.50
896 4462 1.221840 CCCCAACCTCCTCGTGATG 59.778 63.158 0.00 0.00 0.00 3.07
924 4490 6.726490 TTCTATATAAGCCTCGAAACAGGT 57.274 37.500 0.00 0.00 35.72 4.00
987 4571 1.351430 TTTCATCGCGCGACTCCTTG 61.351 55.000 37.37 28.06 0.00 3.61
1024 4608 2.999648 TGAGCTCGAAGCAGGCCT 61.000 61.111 9.64 0.00 45.56 5.19
1118 4702 3.256960 GGAGGTGAACTGGGGCCA 61.257 66.667 4.39 0.00 0.00 5.36
1299 4885 2.028876 TGCTACGTAAGATAGCTGGCA 58.971 47.619 8.60 2.90 44.52 4.92
1303 4889 5.047306 TGCTACGTAAGATAGCTGGCAATAT 60.047 40.000 8.60 0.00 44.52 1.28
1353 4939 1.019278 TTGGTTTGATCGCGAGCTCC 61.019 55.000 26.10 22.61 0.00 4.70
1391 4977 6.425114 CAGTGTAAATACTGCAGTTCTTGTCT 59.575 38.462 27.06 12.60 41.31 3.41
1397 4983 0.397941 TGCAGTTCTTGTCTGAGGGG 59.602 55.000 0.00 0.00 35.20 4.79
1533 5119 2.995574 ACCTCTGGTTCGACCCCG 60.996 66.667 0.00 0.00 37.50 5.73
1578 5164 2.204034 TCTGGACTCCCCTGCACA 59.796 61.111 0.00 0.00 34.22 4.57
1683 5269 3.395858 CGAATTGCTCGCTTGAATCTT 57.604 42.857 0.00 0.00 41.49 2.40
1684 5270 3.096461 CGAATTGCTCGCTTGAATCTTG 58.904 45.455 0.00 0.00 41.49 3.02
1685 5271 3.181517 CGAATTGCTCGCTTGAATCTTGA 60.182 43.478 0.00 0.00 41.49 3.02
1686 5272 4.495349 CGAATTGCTCGCTTGAATCTTGAT 60.495 41.667 0.00 0.00 41.49 2.57
1687 5273 3.752412 TTGCTCGCTTGAATCTTGATG 57.248 42.857 0.00 0.00 0.00 3.07
1696 5282 2.014857 TGAATCTTGATGCTCTGCAGC 58.985 47.619 9.47 0.00 45.81 5.25
1741 5327 2.435059 GAGCTGAGGAACCACGCC 60.435 66.667 0.00 0.00 0.00 5.68
1746 5332 2.029964 GAGGAACCACGCCGACAA 59.970 61.111 0.00 0.00 0.00 3.18
2068 5654 0.039074 CGTAGAGATCCGGTGATGCC 60.039 60.000 0.00 0.00 0.00 4.40
2070 5656 1.271102 GTAGAGATCCGGTGATGCCTC 59.729 57.143 0.00 0.59 34.25 4.70
2072 5658 1.383109 AGATCCGGTGATGCCTCCA 60.383 57.895 0.00 0.00 34.25 3.86
2073 5659 0.765903 AGATCCGGTGATGCCTCCAT 60.766 55.000 0.00 0.00 34.25 3.41
2074 5660 0.321122 GATCCGGTGATGCCTCCATC 60.321 60.000 0.00 0.00 46.46 3.51
2080 5666 4.963878 GATGCCTCCATCGGTTGT 57.036 55.556 0.00 0.00 38.59 3.32
2082 5668 1.871080 GATGCCTCCATCGGTTGTAG 58.129 55.000 0.00 0.00 38.59 2.74
2083 5669 1.139058 GATGCCTCCATCGGTTGTAGT 59.861 52.381 0.00 0.00 38.59 2.73
2128 5714 3.059834 CGGTTACACTTACACATGCGTAC 59.940 47.826 0.00 0.00 0.00 3.67
2129 5715 3.059834 GGTTACACTTACACATGCGTACG 59.940 47.826 11.84 11.84 0.00 3.67
2130 5716 2.427232 ACACTTACACATGCGTACGT 57.573 45.000 17.90 0.00 0.00 3.57
2131 5717 3.557577 ACACTTACACATGCGTACGTA 57.442 42.857 17.90 13.65 0.00 3.57
2132 5718 3.495193 ACACTTACACATGCGTACGTAG 58.505 45.455 17.90 9.48 0.00 3.51
2133 5719 3.189080 ACACTTACACATGCGTACGTAGA 59.811 43.478 17.90 1.48 0.00 2.59
2134 5720 3.784468 CACTTACACATGCGTACGTAGAG 59.216 47.826 17.90 11.72 0.00 2.43
2135 5721 2.463553 TACACATGCGTACGTAGAGC 57.536 50.000 17.90 14.10 0.00 4.09
2138 5761 1.092348 ACATGCGTACGTAGAGCAGA 58.908 50.000 23.93 8.15 44.55 4.26
2149 5772 2.425312 CGTAGAGCAGAGTTGACCTCAT 59.575 50.000 0.00 0.00 43.12 2.90
2152 5775 4.363991 AGAGCAGAGTTGACCTCATTTT 57.636 40.909 0.00 0.00 43.12 1.82
2220 5843 9.847706 ATAATAGCTATATATACATGCGCAGAC 57.152 33.333 18.32 0.00 0.00 3.51
2233 5856 1.267732 GCGCAGACATGTTCATGCTAC 60.268 52.381 21.73 13.84 36.52 3.58
2264 5887 8.641541 CATCTTATATTTAGGGCATGTTTGGTT 58.358 33.333 0.00 0.00 0.00 3.67
2295 5918 3.504863 CTTTGTCATATGTTGCCACAGC 58.495 45.455 1.90 0.00 35.94 4.40
2296 5919 1.462616 TGTCATATGTTGCCACAGCC 58.537 50.000 1.90 0.00 35.94 4.85
2297 5920 1.004628 TGTCATATGTTGCCACAGCCT 59.995 47.619 1.90 0.00 35.94 4.58
2298 5921 2.094675 GTCATATGTTGCCACAGCCTT 58.905 47.619 1.90 0.00 35.94 4.35
2299 5922 3.278574 GTCATATGTTGCCACAGCCTTA 58.721 45.455 1.90 0.00 35.94 2.69
2300 5923 3.065371 GTCATATGTTGCCACAGCCTTAC 59.935 47.826 1.90 0.00 35.94 2.34
2301 5924 2.122783 TATGTTGCCACAGCCTTACC 57.877 50.000 0.00 0.00 35.94 2.85
2302 5925 0.112218 ATGTTGCCACAGCCTTACCA 59.888 50.000 0.00 0.00 35.94 3.25
2303 5926 0.821711 TGTTGCCACAGCCTTACCAC 60.822 55.000 0.00 0.00 38.69 4.16
2304 5927 1.599518 TTGCCACAGCCTTACCACG 60.600 57.895 0.00 0.00 38.69 4.94
2305 5928 2.032071 GCCACAGCCTTACCACGT 59.968 61.111 0.00 0.00 0.00 4.49
2306 5929 2.033194 GCCACAGCCTTACCACGTC 61.033 63.158 0.00 0.00 0.00 4.34
2307 5930 1.375523 CCACAGCCTTACCACGTCC 60.376 63.158 0.00 0.00 0.00 4.79
2308 5931 1.671742 CACAGCCTTACCACGTCCT 59.328 57.895 0.00 0.00 0.00 3.85
2309 5932 0.034896 CACAGCCTTACCACGTCCTT 59.965 55.000 0.00 0.00 0.00 3.36
2310 5933 0.763035 ACAGCCTTACCACGTCCTTT 59.237 50.000 0.00 0.00 0.00 3.11
2311 5934 1.142262 ACAGCCTTACCACGTCCTTTT 59.858 47.619 0.00 0.00 0.00 2.27
2312 5935 2.227194 CAGCCTTACCACGTCCTTTTT 58.773 47.619 0.00 0.00 0.00 1.94
2334 5957 5.993748 TTTTTGAGAAAACCACTCCTGTT 57.006 34.783 0.00 0.00 33.95 3.16
2335 5958 5.993748 TTTTGAGAAAACCACTCCTGTTT 57.006 34.783 0.00 0.00 37.52 2.83
2336 5959 4.981806 TTGAGAAAACCACTCCTGTTTG 57.018 40.909 0.00 0.00 36.14 2.93
2337 5960 3.287222 TGAGAAAACCACTCCTGTTTGG 58.713 45.455 0.00 0.00 36.14 3.28
2338 5961 3.053991 TGAGAAAACCACTCCTGTTTGGA 60.054 43.478 0.00 0.00 43.86 3.53
2346 5969 2.754648 TCCTGTTTGGAGCGTAGGT 58.245 52.632 0.00 0.00 40.56 3.08
2347 5970 1.053424 TCCTGTTTGGAGCGTAGGTT 58.947 50.000 0.00 0.00 40.56 3.50
2348 5971 1.418637 TCCTGTTTGGAGCGTAGGTTT 59.581 47.619 0.00 0.00 40.56 3.27
2349 5972 2.158726 TCCTGTTTGGAGCGTAGGTTTT 60.159 45.455 0.00 0.00 40.56 2.43
2350 5973 2.621526 CCTGTTTGGAGCGTAGGTTTTT 59.378 45.455 0.00 0.00 39.88 1.94
2386 6009 4.534401 GTAAGCTTACGGGCTGGG 57.466 61.111 20.28 0.00 42.24 4.45
2387 6010 1.902556 GTAAGCTTACGGGCTGGGA 59.097 57.895 20.28 0.00 42.24 4.37
2388 6011 0.468648 GTAAGCTTACGGGCTGGGAT 59.531 55.000 20.28 0.00 42.24 3.85
2389 6012 1.690352 GTAAGCTTACGGGCTGGGATA 59.310 52.381 20.28 0.00 42.24 2.59
2390 6013 0.759346 AAGCTTACGGGCTGGGATAG 59.241 55.000 0.00 0.00 42.24 2.08
2391 6014 1.122019 AGCTTACGGGCTGGGATAGG 61.122 60.000 0.00 0.00 41.43 2.57
2392 6015 1.408453 GCTTACGGGCTGGGATAGGT 61.408 60.000 0.00 0.00 0.00 3.08
2393 6016 1.129058 CTTACGGGCTGGGATAGGTT 58.871 55.000 0.00 0.00 0.00 3.50
2394 6017 2.322658 CTTACGGGCTGGGATAGGTTA 58.677 52.381 0.00 0.00 0.00 2.85
2395 6018 2.475339 TACGGGCTGGGATAGGTTAA 57.525 50.000 0.00 0.00 0.00 2.01
2396 6019 1.815757 ACGGGCTGGGATAGGTTAAT 58.184 50.000 0.00 0.00 0.00 1.40
2397 6020 1.420138 ACGGGCTGGGATAGGTTAATG 59.580 52.381 0.00 0.00 0.00 1.90
2398 6021 1.271379 CGGGCTGGGATAGGTTAATGG 60.271 57.143 0.00 0.00 0.00 3.16
2399 6022 1.075536 GGGCTGGGATAGGTTAATGGG 59.924 57.143 0.00 0.00 0.00 4.00
2400 6023 1.547901 GGCTGGGATAGGTTAATGGGC 60.548 57.143 0.00 0.00 0.00 5.36
2401 6024 1.425448 GCTGGGATAGGTTAATGGGCT 59.575 52.381 0.00 0.00 0.00 5.19
2402 6025 2.642807 GCTGGGATAGGTTAATGGGCTA 59.357 50.000 0.00 0.00 0.00 3.93
2403 6026 3.307762 GCTGGGATAGGTTAATGGGCTAG 60.308 52.174 0.00 0.00 0.00 3.42
2404 6027 4.168101 CTGGGATAGGTTAATGGGCTAGA 58.832 47.826 0.00 0.00 0.00 2.43
2405 6028 4.572978 TGGGATAGGTTAATGGGCTAGAA 58.427 43.478 0.00 0.00 0.00 2.10
2406 6029 4.597507 TGGGATAGGTTAATGGGCTAGAAG 59.402 45.833 0.00 0.00 0.00 2.85
2407 6030 4.597940 GGGATAGGTTAATGGGCTAGAAGT 59.402 45.833 0.00 0.00 0.00 3.01
2408 6031 5.513267 GGGATAGGTTAATGGGCTAGAAGTG 60.513 48.000 0.00 0.00 0.00 3.16
2409 6032 3.933861 AGGTTAATGGGCTAGAAGTGG 57.066 47.619 0.00 0.00 0.00 4.00
2410 6033 2.092375 AGGTTAATGGGCTAGAAGTGGC 60.092 50.000 0.00 0.00 0.00 5.01
2415 6038 3.404773 GGCTAGAAGTGGCCCAGT 58.595 61.111 0.00 0.00 44.65 4.00
2416 6039 1.685820 GGCTAGAAGTGGCCCAGTT 59.314 57.895 2.71 2.71 44.65 3.16
2417 6040 0.038310 GGCTAGAAGTGGCCCAGTTT 59.962 55.000 5.05 0.00 44.65 2.66
2418 6041 1.280998 GGCTAGAAGTGGCCCAGTTTA 59.719 52.381 5.05 0.00 44.65 2.01
2419 6042 2.357075 GCTAGAAGTGGCCCAGTTTAC 58.643 52.381 5.05 0.00 0.00 2.01
2420 6043 2.290071 GCTAGAAGTGGCCCAGTTTACA 60.290 50.000 5.05 0.00 0.00 2.41
2421 6044 3.809324 GCTAGAAGTGGCCCAGTTTACAA 60.809 47.826 5.05 0.00 0.00 2.41
2422 6045 3.306472 AGAAGTGGCCCAGTTTACAAA 57.694 42.857 5.05 0.00 0.00 2.83
2423 6046 3.637769 AGAAGTGGCCCAGTTTACAAAA 58.362 40.909 5.05 0.00 0.00 2.44
2424 6047 4.223144 AGAAGTGGCCCAGTTTACAAAAT 58.777 39.130 5.05 0.00 0.00 1.82
2425 6048 5.390387 AGAAGTGGCCCAGTTTACAAAATA 58.610 37.500 5.05 0.00 0.00 1.40
2426 6049 5.836358 AGAAGTGGCCCAGTTTACAAAATAA 59.164 36.000 5.05 0.00 0.00 1.40
2427 6050 5.462530 AGTGGCCCAGTTTACAAAATAAC 57.537 39.130 0.00 0.00 0.00 1.89
2428 6051 5.144832 AGTGGCCCAGTTTACAAAATAACT 58.855 37.500 0.00 0.00 35.06 2.24
2429 6052 5.243060 AGTGGCCCAGTTTACAAAATAACTC 59.757 40.000 0.00 0.00 32.50 3.01
2430 6053 4.216687 TGGCCCAGTTTACAAAATAACTCG 59.783 41.667 0.00 0.00 32.50 4.18
2431 6054 4.380128 GGCCCAGTTTACAAAATAACTCGG 60.380 45.833 0.00 0.00 36.21 4.63
2432 6055 4.216902 GCCCAGTTTACAAAATAACTCGGT 59.783 41.667 0.00 0.00 35.74 4.69
2433 6056 5.278610 GCCCAGTTTACAAAATAACTCGGTT 60.279 40.000 0.00 0.00 35.74 4.44
2434 6057 6.736519 GCCCAGTTTACAAAATAACTCGGTTT 60.737 38.462 0.00 0.00 35.74 3.27
2435 6058 7.204604 CCCAGTTTACAAAATAACTCGGTTTT 58.795 34.615 0.00 0.00 32.50 2.43
2436 6059 7.707464 CCCAGTTTACAAAATAACTCGGTTTTT 59.293 33.333 0.00 0.00 32.50 1.94
2453 6076 2.254546 TTTTCTTTCGGAGCAGCTGA 57.745 45.000 20.43 0.00 0.00 4.26
2454 6077 2.254546 TTTCTTTCGGAGCAGCTGAA 57.745 45.000 20.43 0.00 40.08 3.02
2455 6078 1.512926 TTCTTTCGGAGCAGCTGAAC 58.487 50.000 20.43 10.03 41.48 3.18
2456 6079 0.320771 TCTTTCGGAGCAGCTGAACC 60.321 55.000 20.43 17.90 41.48 3.62
2457 6080 0.321122 CTTTCGGAGCAGCTGAACCT 60.321 55.000 20.43 4.69 41.48 3.50
2458 6081 0.973632 TTTCGGAGCAGCTGAACCTA 59.026 50.000 20.43 8.78 41.48 3.08
2459 6082 0.973632 TTCGGAGCAGCTGAACCTAA 59.026 50.000 20.43 14.30 36.97 2.69
2460 6083 0.246635 TCGGAGCAGCTGAACCTAAC 59.753 55.000 20.43 0.00 0.00 2.34
2461 6084 0.037326 CGGAGCAGCTGAACCTAACA 60.037 55.000 20.43 0.00 0.00 2.41
2462 6085 1.731720 GGAGCAGCTGAACCTAACAG 58.268 55.000 20.43 0.00 38.27 3.16
2463 6086 1.002544 GGAGCAGCTGAACCTAACAGT 59.997 52.381 20.43 0.00 37.64 3.55
2464 6087 2.551071 GGAGCAGCTGAACCTAACAGTT 60.551 50.000 20.43 0.00 37.64 3.16
2465 6088 3.306780 GGAGCAGCTGAACCTAACAGTTA 60.307 47.826 20.43 0.00 37.64 2.24
2466 6089 3.929610 GAGCAGCTGAACCTAACAGTTAG 59.070 47.826 20.43 12.84 37.64 2.34
2467 6090 2.416893 GCAGCTGAACCTAACAGTTAGC 59.583 50.000 20.43 5.20 37.64 3.09
2468 6091 3.003480 CAGCTGAACCTAACAGTTAGCC 58.997 50.000 8.42 6.70 37.64 3.93
2469 6092 2.027100 AGCTGAACCTAACAGTTAGCCC 60.027 50.000 14.18 6.40 37.64 5.19
2470 6093 2.290071 GCTGAACCTAACAGTTAGCCCA 60.290 50.000 14.18 10.00 37.64 5.36
2471 6094 3.335579 CTGAACCTAACAGTTAGCCCAC 58.664 50.000 14.18 6.48 31.81 4.61
2472 6095 2.289195 TGAACCTAACAGTTAGCCCACG 60.289 50.000 14.18 3.81 31.81 4.94
2473 6096 0.036671 ACCTAACAGTTAGCCCACGC 60.037 55.000 14.18 0.00 31.81 5.34
2474 6097 1.082117 CCTAACAGTTAGCCCACGCG 61.082 60.000 14.18 3.53 41.18 6.01
2475 6098 0.389426 CTAACAGTTAGCCCACGCGT 60.389 55.000 5.58 5.58 41.18 6.01
2476 6099 0.668096 TAACAGTTAGCCCACGCGTG 60.668 55.000 31.77 31.77 41.18 5.34
2486 6109 3.268603 CACGCGTGGAAGTGCACA 61.269 61.111 31.15 0.00 0.00 4.57
2487 6110 3.269347 ACGCGTGGAAGTGCACAC 61.269 61.111 21.04 12.41 0.00 3.82
2488 6111 3.268603 CGCGTGGAAGTGCACACA 61.269 61.111 21.04 12.14 37.45 3.72
2489 6112 2.818487 CGCGTGGAAGTGCACACAA 61.818 57.895 21.04 3.09 37.45 3.33
2490 6113 1.431440 GCGTGGAAGTGCACACAAA 59.569 52.632 21.04 0.00 37.45 2.83
2491 6114 0.030638 GCGTGGAAGTGCACACAAAT 59.969 50.000 21.04 0.00 37.45 2.32
2492 6115 1.925946 GCGTGGAAGTGCACACAAATC 60.926 52.381 21.04 8.65 37.45 2.17
2493 6116 1.603802 CGTGGAAGTGCACACAAATCT 59.396 47.619 21.04 0.00 37.45 2.40
2494 6117 2.805671 CGTGGAAGTGCACACAAATCTA 59.194 45.455 21.04 4.23 37.45 1.98
2495 6118 3.249799 CGTGGAAGTGCACACAAATCTAA 59.750 43.478 21.04 0.12 37.45 2.10
2496 6119 4.537015 GTGGAAGTGCACACAAATCTAAC 58.463 43.478 21.04 8.01 37.54 2.34
2497 6120 3.249799 TGGAAGTGCACACAAATCTAACG 59.750 43.478 21.04 0.00 0.00 3.18
2498 6121 3.364964 GGAAGTGCACACAAATCTAACGG 60.365 47.826 21.04 0.00 0.00 4.44
2499 6122 1.535462 AGTGCACACAAATCTAACGGC 59.465 47.619 21.04 0.00 0.00 5.68
2500 6123 1.265635 GTGCACACAAATCTAACGGCA 59.734 47.619 13.17 0.00 0.00 5.69
2501 6124 2.095263 GTGCACACAAATCTAACGGCAT 60.095 45.455 13.17 0.00 32.16 4.40
2502 6125 3.126171 GTGCACACAAATCTAACGGCATA 59.874 43.478 13.17 0.00 32.16 3.14
2503 6126 3.373748 TGCACACAAATCTAACGGCATAG 59.626 43.478 0.00 0.00 0.00 2.23
2504 6127 3.242739 GCACACAAATCTAACGGCATAGG 60.243 47.826 0.00 0.00 0.00 2.57
2505 6128 4.188462 CACACAAATCTAACGGCATAGGA 58.812 43.478 0.00 0.00 0.00 2.94
2506 6129 4.034048 CACACAAATCTAACGGCATAGGAC 59.966 45.833 0.00 0.00 0.00 3.85
2514 6137 4.603946 GGCATAGGACGACCGGGC 62.604 72.222 6.32 0.00 41.83 6.13
2515 6138 4.603946 GCATAGGACGACCGGGCC 62.604 72.222 6.32 0.00 41.83 5.80
2516 6139 3.151710 CATAGGACGACCGGGCCA 61.152 66.667 6.32 0.00 41.83 5.36
2517 6140 2.838225 ATAGGACGACCGGGCCAG 60.838 66.667 6.32 0.00 41.83 4.85
2518 6141 3.369410 ATAGGACGACCGGGCCAGA 62.369 63.158 6.32 0.00 41.83 3.86
2519 6142 2.866523 ATAGGACGACCGGGCCAGAA 62.867 60.000 6.32 0.00 41.83 3.02
2520 6143 4.452733 GGACGACCGGGCCAGAAG 62.453 72.222 6.32 0.00 0.00 2.85
2521 6144 4.452733 GACGACCGGGCCAGAAGG 62.453 72.222 6.32 4.47 38.23 3.46
2524 6147 4.452733 GACCGGGCCAGAAGGTCG 62.453 72.222 18.67 5.86 43.96 4.79
2526 6149 3.702048 CCGGGCCAGAAGGTCGAA 61.702 66.667 4.39 0.00 41.80 3.71
2527 6150 2.434359 CGGGCCAGAAGGTCGAAC 60.434 66.667 4.39 0.00 41.80 3.95
2528 6151 2.434359 GGGCCAGAAGGTCGAACG 60.434 66.667 4.39 0.00 41.80 3.95
2529 6152 2.434359 GGCCAGAAGGTCGAACGG 60.434 66.667 0.00 0.00 37.19 4.44
2530 6153 3.119096 GCCAGAAGGTCGAACGGC 61.119 66.667 1.17 1.17 37.19 5.68
2531 6154 2.657237 CCAGAAGGTCGAACGGCT 59.343 61.111 0.00 0.00 0.00 5.52
2532 6155 1.888018 CCAGAAGGTCGAACGGCTA 59.112 57.895 0.00 0.00 0.00 3.93
2533 6156 0.245539 CCAGAAGGTCGAACGGCTAA 59.754 55.000 0.00 0.00 0.00 3.09
2534 6157 1.337447 CCAGAAGGTCGAACGGCTAAA 60.337 52.381 0.00 0.00 0.00 1.85
2535 6158 2.409975 CAGAAGGTCGAACGGCTAAAA 58.590 47.619 0.00 0.00 0.00 1.52
2536 6159 2.803956 CAGAAGGTCGAACGGCTAAAAA 59.196 45.455 0.00 0.00 0.00 1.94
2537 6160 3.435671 CAGAAGGTCGAACGGCTAAAAAT 59.564 43.478 0.00 0.00 0.00 1.82
2538 6161 4.628333 CAGAAGGTCGAACGGCTAAAAATA 59.372 41.667 0.00 0.00 0.00 1.40
2539 6162 4.628766 AGAAGGTCGAACGGCTAAAAATAC 59.371 41.667 0.00 0.00 0.00 1.89
2540 6163 3.929094 AGGTCGAACGGCTAAAAATACA 58.071 40.909 0.00 0.00 0.00 2.29
2541 6164 3.681417 AGGTCGAACGGCTAAAAATACAC 59.319 43.478 0.00 0.00 0.00 2.90
2542 6165 3.432933 GGTCGAACGGCTAAAAATACACA 59.567 43.478 0.00 0.00 0.00 3.72
2543 6166 4.093850 GGTCGAACGGCTAAAAATACACAT 59.906 41.667 0.00 0.00 0.00 3.21
2544 6167 5.019498 GTCGAACGGCTAAAAATACACATG 58.981 41.667 0.00 0.00 0.00 3.21
2545 6168 4.093703 TCGAACGGCTAAAAATACACATGG 59.906 41.667 0.00 0.00 0.00 3.66
2546 6169 3.775661 ACGGCTAAAAATACACATGGC 57.224 42.857 0.00 0.00 0.00 4.40
2547 6170 2.096819 ACGGCTAAAAATACACATGGCG 59.903 45.455 0.00 0.00 45.13 5.69
2548 6171 2.096819 CGGCTAAAAATACACATGGCGT 59.903 45.455 0.00 0.00 37.27 5.68
2549 6172 3.691498 GGCTAAAAATACACATGGCGTC 58.309 45.455 0.00 0.00 0.00 5.19
2550 6173 3.127895 GGCTAAAAATACACATGGCGTCA 59.872 43.478 0.00 0.00 0.00 4.35
2551 6174 4.342772 GCTAAAAATACACATGGCGTCAG 58.657 43.478 0.00 0.00 0.00 3.51
2552 6175 4.094294 GCTAAAAATACACATGGCGTCAGA 59.906 41.667 0.00 0.00 0.00 3.27
2553 6176 5.391523 GCTAAAAATACACATGGCGTCAGAA 60.392 40.000 0.00 0.00 0.00 3.02
2554 6177 4.419522 AAAATACACATGGCGTCAGAAC 57.580 40.909 0.00 0.00 0.00 3.01
2565 6188 2.856091 CGTCAGAACGCTTGGTTTAG 57.144 50.000 0.00 0.00 42.82 1.85
2566 6189 1.459592 CGTCAGAACGCTTGGTTTAGG 59.540 52.381 0.00 0.00 42.82 2.69
2567 6190 1.197036 GTCAGAACGCTTGGTTTAGGC 59.803 52.381 0.00 0.00 39.50 3.93
2568 6191 1.071699 TCAGAACGCTTGGTTTAGGCT 59.928 47.619 0.00 0.00 39.50 4.58
2569 6192 1.464997 CAGAACGCTTGGTTTAGGCTC 59.535 52.381 0.00 0.00 39.50 4.70
2570 6193 1.071699 AGAACGCTTGGTTTAGGCTCA 59.928 47.619 0.00 0.00 39.50 4.26
2571 6194 1.464997 GAACGCTTGGTTTAGGCTCAG 59.535 52.381 0.00 0.00 39.50 3.35
2572 6195 0.396811 ACGCTTGGTTTAGGCTCAGT 59.603 50.000 0.00 0.00 0.00 3.41
2573 6196 1.202770 ACGCTTGGTTTAGGCTCAGTT 60.203 47.619 0.00 0.00 0.00 3.16
2574 6197 1.880027 CGCTTGGTTTAGGCTCAGTTT 59.120 47.619 0.00 0.00 0.00 2.66
2575 6198 2.293399 CGCTTGGTTTAGGCTCAGTTTT 59.707 45.455 0.00 0.00 0.00 2.43
2576 6199 3.500680 CGCTTGGTTTAGGCTCAGTTTTA 59.499 43.478 0.00 0.00 0.00 1.52
2577 6200 4.612939 CGCTTGGTTTAGGCTCAGTTTTAC 60.613 45.833 0.00 0.00 0.00 2.01
2578 6201 4.519350 GCTTGGTTTAGGCTCAGTTTTACT 59.481 41.667 0.00 0.00 0.00 2.24
2580 6203 5.043737 TGGTTTAGGCTCAGTTTTACTGT 57.956 39.130 6.71 0.00 46.03 3.55
2581 6204 5.061179 TGGTTTAGGCTCAGTTTTACTGTC 58.939 41.667 6.71 1.28 46.03 3.51
2582 6205 4.454847 GGTTTAGGCTCAGTTTTACTGTCC 59.545 45.833 6.71 8.98 46.03 4.02
2583 6206 5.306394 GTTTAGGCTCAGTTTTACTGTCCT 58.694 41.667 19.14 19.14 46.03 3.85
2584 6207 6.461640 GTTTAGGCTCAGTTTTACTGTCCTA 58.538 40.000 17.83 17.83 46.03 2.94
2585 6208 6.675413 TTAGGCTCAGTTTTACTGTCCTAA 57.325 37.500 23.20 23.20 46.56 2.69
2586 6209 5.562298 AGGCTCAGTTTTACTGTCCTAAA 57.438 39.130 16.02 0.00 46.03 1.85
2587 6210 5.937111 AGGCTCAGTTTTACTGTCCTAAAA 58.063 37.500 16.02 0.00 46.03 1.52
2588 6211 6.362248 AGGCTCAGTTTTACTGTCCTAAAAA 58.638 36.000 16.02 0.00 46.03 1.94
2589 6212 7.004691 AGGCTCAGTTTTACTGTCCTAAAAAT 58.995 34.615 16.02 0.00 46.03 1.82
2590 6213 7.040409 AGGCTCAGTTTTACTGTCCTAAAAATG 60.040 37.037 16.02 7.87 46.03 2.32
2591 6214 7.040686 GGCTCAGTTTTACTGTCCTAAAAATGA 60.041 37.037 13.45 13.45 46.03 2.57
2592 6215 8.515414 GCTCAGTTTTACTGTCCTAAAAATGAT 58.485 33.333 14.14 0.00 43.93 2.45
2594 6217 9.567776 TCAGTTTTACTGTCCTAAAAATGATCA 57.432 29.630 11.26 0.00 46.03 2.92
2604 6227 9.362151 TGTCCTAAAAATGATCAATTATACCCC 57.638 33.333 0.00 0.00 0.00 4.95
2605 6228 9.588096 GTCCTAAAAATGATCAATTATACCCCT 57.412 33.333 0.00 0.00 0.00 4.79
2606 6229 9.807921 TCCTAAAAATGATCAATTATACCCCTC 57.192 33.333 0.00 0.00 0.00 4.30
2607 6230 8.730680 CCTAAAAATGATCAATTATACCCCTCG 58.269 37.037 0.00 0.00 0.00 4.63
2608 6231 9.284968 CTAAAAATGATCAATTATACCCCTCGT 57.715 33.333 0.00 0.00 0.00 4.18
2609 6232 7.510549 AAAATGATCAATTATACCCCTCGTG 57.489 36.000 0.00 0.00 0.00 4.35
2610 6233 6.433847 AATGATCAATTATACCCCTCGTGA 57.566 37.500 0.00 0.00 0.00 4.35
2611 6234 6.627087 ATGATCAATTATACCCCTCGTGAT 57.373 37.500 0.00 0.00 0.00 3.06
2612 6235 6.433847 TGATCAATTATACCCCTCGTGATT 57.566 37.500 0.00 0.00 0.00 2.57
2613 6236 7.547697 TGATCAATTATACCCCTCGTGATTA 57.452 36.000 0.00 0.00 0.00 1.75
2614 6237 7.383687 TGATCAATTATACCCCTCGTGATTAC 58.616 38.462 0.00 0.00 0.00 1.89
2628 6251 4.264543 GTGATTACGACAATGGCTTCAG 57.735 45.455 0.00 0.00 0.00 3.02
2629 6252 3.684788 GTGATTACGACAATGGCTTCAGT 59.315 43.478 0.00 0.00 0.00 3.41
2630 6253 4.868171 GTGATTACGACAATGGCTTCAGTA 59.132 41.667 0.00 0.00 0.00 2.74
2631 6254 5.005779 GTGATTACGACAATGGCTTCAGTAG 59.994 44.000 0.00 0.00 0.00 2.57
2632 6255 4.530710 TTACGACAATGGCTTCAGTAGT 57.469 40.909 0.00 0.00 0.00 2.73
2633 6256 2.960819 ACGACAATGGCTTCAGTAGTC 58.039 47.619 0.00 0.00 0.00 2.59
2634 6257 2.271800 CGACAATGGCTTCAGTAGTCC 58.728 52.381 0.00 0.00 0.00 3.85
2635 6258 2.093973 CGACAATGGCTTCAGTAGTCCT 60.094 50.000 0.00 0.00 0.00 3.85
2636 6259 3.617531 CGACAATGGCTTCAGTAGTCCTT 60.618 47.826 0.00 0.00 0.00 3.36
2637 6260 3.679389 ACAATGGCTTCAGTAGTCCTTG 58.321 45.455 0.00 0.00 0.00 3.61
2638 6261 3.327757 ACAATGGCTTCAGTAGTCCTTGA 59.672 43.478 4.11 0.00 0.00 3.02
2639 6262 4.018960 ACAATGGCTTCAGTAGTCCTTGAT 60.019 41.667 4.11 0.00 0.00 2.57
2640 6263 3.616956 TGGCTTCAGTAGTCCTTGATG 57.383 47.619 0.00 0.00 0.00 3.07
2641 6264 2.906389 TGGCTTCAGTAGTCCTTGATGT 59.094 45.455 0.00 0.00 0.00 3.06
2642 6265 3.265791 GGCTTCAGTAGTCCTTGATGTG 58.734 50.000 0.00 0.00 0.00 3.21
2643 6266 2.675348 GCTTCAGTAGTCCTTGATGTGC 59.325 50.000 0.00 0.00 0.00 4.57
2644 6267 3.618507 GCTTCAGTAGTCCTTGATGTGCT 60.619 47.826 0.00 0.00 0.00 4.40
2645 6268 4.573900 CTTCAGTAGTCCTTGATGTGCTT 58.426 43.478 0.00 0.00 0.00 3.91
2646 6269 4.623932 TCAGTAGTCCTTGATGTGCTTT 57.376 40.909 0.00 0.00 0.00 3.51
2647 6270 4.569943 TCAGTAGTCCTTGATGTGCTTTC 58.430 43.478 0.00 0.00 0.00 2.62
2648 6271 4.040339 TCAGTAGTCCTTGATGTGCTTTCA 59.960 41.667 0.00 0.00 0.00 2.69
2649 6272 4.940046 CAGTAGTCCTTGATGTGCTTTCAT 59.060 41.667 0.00 0.00 0.00 2.57
2650 6273 5.413833 CAGTAGTCCTTGATGTGCTTTCATT 59.586 40.000 0.00 0.00 0.00 2.57
2651 6274 6.006449 AGTAGTCCTTGATGTGCTTTCATTT 58.994 36.000 0.00 0.00 0.00 2.32
2652 6275 5.382618 AGTCCTTGATGTGCTTTCATTTC 57.617 39.130 0.00 0.00 0.00 2.17
2653 6276 4.828939 AGTCCTTGATGTGCTTTCATTTCA 59.171 37.500 0.00 0.00 0.00 2.69
2654 6277 5.479375 AGTCCTTGATGTGCTTTCATTTCAT 59.521 36.000 0.00 0.00 0.00 2.57
2655 6278 6.014840 AGTCCTTGATGTGCTTTCATTTCATT 60.015 34.615 0.00 0.00 0.00 2.57
2656 6279 6.647895 GTCCTTGATGTGCTTTCATTTCATTT 59.352 34.615 0.00 0.00 0.00 2.32
2657 6280 7.814107 GTCCTTGATGTGCTTTCATTTCATTTA 59.186 33.333 0.00 0.00 0.00 1.40
2658 6281 8.366401 TCCTTGATGTGCTTTCATTTCATTTAA 58.634 29.630 0.00 0.00 0.00 1.52
2659 6282 8.437742 CCTTGATGTGCTTTCATTTCATTTAAC 58.562 33.333 0.00 0.00 0.00 2.01
2660 6283 9.199982 CTTGATGTGCTTTCATTTCATTTAACT 57.800 29.630 0.00 0.00 0.00 2.24
2661 6284 8.746922 TGATGTGCTTTCATTTCATTTAACTC 57.253 30.769 0.00 0.00 0.00 3.01
2662 6285 8.579006 TGATGTGCTTTCATTTCATTTAACTCT 58.421 29.630 0.00 0.00 0.00 3.24
2663 6286 9.415544 GATGTGCTTTCATTTCATTTAACTCTT 57.584 29.630 0.00 0.00 0.00 2.85
2664 6287 9.768662 ATGTGCTTTCATTTCATTTAACTCTTT 57.231 25.926 0.00 0.00 0.00 2.52
2672 6295 9.567776 TCATTTCATTTAACTCTTTACACCAGA 57.432 29.630 0.00 0.00 0.00 3.86
2691 6314 9.574516 ACACCAGATTTATCTTAAGACAAACTT 57.425 29.630 11.00 0.00 37.55 2.66
2806 6429 7.420184 TGATAGTGATTTGGTATGTATTGCG 57.580 36.000 0.00 0.00 0.00 4.85
2807 6430 7.213678 TGATAGTGATTTGGTATGTATTGCGA 58.786 34.615 0.00 0.00 0.00 5.10
2808 6431 7.713073 TGATAGTGATTTGGTATGTATTGCGAA 59.287 33.333 0.00 0.00 0.00 4.70
2809 6432 6.119144 AGTGATTTGGTATGTATTGCGAAC 57.881 37.500 0.00 0.00 0.00 3.95
2810 6433 4.961551 GTGATTTGGTATGTATTGCGAACG 59.038 41.667 0.00 0.00 0.00 3.95
2811 6434 4.632251 TGATTTGGTATGTATTGCGAACGT 59.368 37.500 0.00 0.00 0.00 3.99
2812 6435 5.122554 TGATTTGGTATGTATTGCGAACGTT 59.877 36.000 0.00 0.00 0.00 3.99
2813 6436 4.587211 TTGGTATGTATTGCGAACGTTC 57.413 40.909 18.47 18.47 0.00 3.95
2814 6437 3.586892 TGGTATGTATTGCGAACGTTCA 58.413 40.909 26.71 9.14 0.00 3.18
2815 6438 4.185394 TGGTATGTATTGCGAACGTTCAT 58.815 39.130 26.71 15.55 0.00 2.57
2816 6439 4.632251 TGGTATGTATTGCGAACGTTCATT 59.368 37.500 26.71 11.02 0.00 2.57
2817 6440 5.195379 GGTATGTATTGCGAACGTTCATTC 58.805 41.667 26.71 15.42 0.00 2.67
2818 6441 5.006358 GGTATGTATTGCGAACGTTCATTCT 59.994 40.000 26.71 11.53 0.00 2.40
2819 6442 5.545658 ATGTATTGCGAACGTTCATTCTT 57.454 34.783 26.71 10.37 0.00 2.52
2820 6443 5.351233 TGTATTGCGAACGTTCATTCTTT 57.649 34.783 26.71 9.38 0.00 2.52
2821 6444 5.753744 TGTATTGCGAACGTTCATTCTTTT 58.246 33.333 26.71 7.94 0.00 2.27
2822 6445 6.202937 TGTATTGCGAACGTTCATTCTTTTT 58.797 32.000 26.71 6.48 0.00 1.94
2823 6446 5.806089 ATTGCGAACGTTCATTCTTTTTC 57.194 34.783 26.71 0.00 0.00 2.29
2824 6447 4.545823 TGCGAACGTTCATTCTTTTTCT 57.454 36.364 26.71 0.00 0.00 2.52
2825 6448 5.660629 TGCGAACGTTCATTCTTTTTCTA 57.339 34.783 26.71 0.00 0.00 2.10
2826 6449 6.236017 TGCGAACGTTCATTCTTTTTCTAT 57.764 33.333 26.71 0.00 0.00 1.98
2827 6450 7.354025 TGCGAACGTTCATTCTTTTTCTATA 57.646 32.000 26.71 0.00 0.00 1.31
2828 6451 7.798801 TGCGAACGTTCATTCTTTTTCTATAA 58.201 30.769 26.71 0.00 0.00 0.98
2829 6452 8.283992 TGCGAACGTTCATTCTTTTTCTATAAA 58.716 29.630 26.71 0.00 0.00 1.40
2830 6453 8.564766 GCGAACGTTCATTCTTTTTCTATAAAC 58.435 33.333 26.71 0.00 0.00 2.01
2831 6454 9.807386 CGAACGTTCATTCTTTTTCTATAAACT 57.193 29.630 26.71 0.00 0.00 2.66
2842 6465 8.799367 TCTTTTTCTATAAACTTAGCCAAACCC 58.201 33.333 0.00 0.00 0.00 4.11
2843 6466 8.715190 TTTTTCTATAAACTTAGCCAAACCCT 57.285 30.769 0.00 0.00 0.00 4.34
2844 6467 9.810870 TTTTTCTATAAACTTAGCCAAACCCTA 57.189 29.630 0.00 0.00 0.00 3.53
2845 6468 8.797350 TTTCTATAAACTTAGCCAAACCCTAC 57.203 34.615 0.00 0.00 0.00 3.18
2846 6469 7.499200 TCTATAAACTTAGCCAAACCCTACA 57.501 36.000 0.00 0.00 0.00 2.74
2847 6470 7.920227 TCTATAAACTTAGCCAAACCCTACAA 58.080 34.615 0.00 0.00 0.00 2.41
2848 6471 8.554011 TCTATAAACTTAGCCAAACCCTACAAT 58.446 33.333 0.00 0.00 0.00 2.71
2849 6472 9.841295 CTATAAACTTAGCCAAACCCTACAATA 57.159 33.333 0.00 0.00 0.00 1.90
2851 6474 9.709387 ATAAACTTAGCCAAACCCTACAATATT 57.291 29.630 0.00 0.00 0.00 1.28
2852 6475 8.430573 AAACTTAGCCAAACCCTACAATATTT 57.569 30.769 0.00 0.00 0.00 1.40
2853 6476 9.536510 AAACTTAGCCAAACCCTACAATATTTA 57.463 29.630 0.00 0.00 0.00 1.40
2854 6477 9.536510 AACTTAGCCAAACCCTACAATATTTAA 57.463 29.630 0.00 0.00 0.00 1.52
2855 6478 8.963725 ACTTAGCCAAACCCTACAATATTTAAC 58.036 33.333 0.00 0.00 0.00 2.01
2856 6479 9.185680 CTTAGCCAAACCCTACAATATTTAACT 57.814 33.333 0.00 0.00 0.00 2.24
2857 6480 9.536510 TTAGCCAAACCCTACAATATTTAACTT 57.463 29.630 0.00 0.00 0.00 2.66
2859 6482 8.963725 AGCCAAACCCTACAATATTTAACTTAC 58.036 33.333 0.00 0.00 0.00 2.34
2860 6483 7.911727 GCCAAACCCTACAATATTTAACTTACG 59.088 37.037 0.00 0.00 0.00 3.18
2861 6484 9.165035 CCAAACCCTACAATATTTAACTTACGA 57.835 33.333 0.00 0.00 0.00 3.43
2876 6499 9.681692 TTTAACTTACGATAAGCTAATATGCGA 57.318 29.630 0.00 0.00 38.13 5.10
2877 6500 9.681692 TTAACTTACGATAAGCTAATATGCGAA 57.318 29.630 0.00 0.00 38.13 4.70
2878 6501 8.758633 AACTTACGATAAGCTAATATGCGAAT 57.241 30.769 0.00 0.00 38.13 3.34
2879 6502 8.758633 ACTTACGATAAGCTAATATGCGAATT 57.241 30.769 0.00 0.00 38.13 2.17
2880 6503 9.850628 ACTTACGATAAGCTAATATGCGAATTA 57.149 29.630 0.00 0.00 38.13 1.40
2898 6521 9.453325 TGCGAATTAAAAATAAACGAAGAAAGT 57.547 25.926 0.00 0.00 0.00 2.66
2909 6532 9.683069 AATAAACGAAGAAAGTAAAGTACGAGA 57.317 29.630 0.00 0.00 0.00 4.04
2910 6533 7.620397 AAACGAAGAAAGTAAAGTACGAGAG 57.380 36.000 0.00 0.00 0.00 3.20
2912 6535 7.426929 ACGAAGAAAGTAAAGTACGAGAGTA 57.573 36.000 0.00 0.00 46.88 2.59
2926 6549 5.751243 ACGAGAGTAAGTTGCAAATTTGT 57.249 34.783 18.18 5.29 46.88 2.83
2927 6550 6.854496 ACGAGAGTAAGTTGCAAATTTGTA 57.146 33.333 18.18 12.46 46.88 2.41
2928 6551 6.656003 ACGAGAGTAAGTTGCAAATTTGTAC 58.344 36.000 18.18 16.22 46.88 2.90
2929 6552 6.077838 CGAGAGTAAGTTGCAAATTTGTACC 58.922 40.000 18.18 7.86 0.00 3.34
2930 6553 6.293190 CGAGAGTAAGTTGCAAATTTGTACCA 60.293 38.462 18.18 6.47 0.00 3.25
2931 6554 6.735130 AGAGTAAGTTGCAAATTTGTACCAC 58.265 36.000 18.18 8.54 0.00 4.16
2932 6555 6.320164 AGAGTAAGTTGCAAATTTGTACCACA 59.680 34.615 18.18 5.76 0.00 4.17
2933 6556 6.868622 AGTAAGTTGCAAATTTGTACCACAA 58.131 32.000 18.18 11.22 36.11 3.33
2945 6568 4.865776 TTGTACCACAAAAGCATTAGTGC 58.134 39.130 1.21 1.21 42.52 4.40
2946 6569 4.261825 TTGTACCACAAAAGCATTAGTGCC 60.262 41.667 6.59 0.00 42.89 5.01
2947 6570 7.497071 TTGTACCACAAAAGCATTAGTGCCG 62.497 44.000 6.59 0.00 42.89 5.69
2969 6592 2.314561 CACACCATGTGCAAGTAACG 57.685 50.000 0.00 0.00 41.89 3.18
2970 6593 1.601903 CACACCATGTGCAAGTAACGT 59.398 47.619 0.00 0.00 41.89 3.99
2971 6594 2.803386 CACACCATGTGCAAGTAACGTA 59.197 45.455 0.00 0.00 41.89 3.57
2972 6595 3.435327 CACACCATGTGCAAGTAACGTAT 59.565 43.478 0.00 0.00 41.89 3.06
2973 6596 3.682858 ACACCATGTGCAAGTAACGTATC 59.317 43.478 0.00 0.00 36.98 2.24
2974 6597 3.063452 CACCATGTGCAAGTAACGTATCC 59.937 47.826 0.00 0.00 0.00 2.59
2975 6598 2.284150 CCATGTGCAAGTAACGTATCCG 59.716 50.000 0.00 0.00 40.83 4.18
2976 6599 3.183754 CATGTGCAAGTAACGTATCCGA 58.816 45.455 0.00 0.00 37.88 4.55
2977 6600 2.598589 TGTGCAAGTAACGTATCCGAC 58.401 47.619 0.00 0.00 37.88 4.79
2978 6601 2.030096 TGTGCAAGTAACGTATCCGACA 60.030 45.455 0.00 0.00 37.88 4.35
2979 6602 2.343544 GTGCAAGTAACGTATCCGACAC 59.656 50.000 0.00 0.00 37.88 3.67
2980 6603 1.922545 GCAAGTAACGTATCCGACACC 59.077 52.381 0.00 0.00 37.88 4.16
2981 6604 2.533266 CAAGTAACGTATCCGACACCC 58.467 52.381 0.00 0.00 37.88 4.61
2982 6605 1.838112 AGTAACGTATCCGACACCCA 58.162 50.000 0.00 0.00 37.88 4.51
2983 6606 1.474077 AGTAACGTATCCGACACCCAC 59.526 52.381 0.00 0.00 37.88 4.61
2984 6607 0.451383 TAACGTATCCGACACCCACG 59.549 55.000 0.00 0.00 37.88 4.94
2985 6608 1.526575 AACGTATCCGACACCCACGT 61.527 55.000 0.00 0.00 46.82 4.49
2986 6609 0.676466 ACGTATCCGACACCCACGTA 60.676 55.000 0.00 0.00 43.39 3.57
2987 6610 0.664761 CGTATCCGACACCCACGTAT 59.335 55.000 0.00 0.00 35.63 3.06
2988 6611 1.066002 CGTATCCGACACCCACGTATT 59.934 52.381 0.00 0.00 35.63 1.89
2989 6612 2.735823 GTATCCGACACCCACGTATTC 58.264 52.381 0.00 0.00 0.00 1.75
2990 6613 1.187974 ATCCGACACCCACGTATTCA 58.812 50.000 0.00 0.00 0.00 2.57
2991 6614 0.244450 TCCGACACCCACGTATTCAC 59.756 55.000 0.00 0.00 0.00 3.18
3002 6625 2.425989 CGTATTCACGCTGCTTTGAG 57.574 50.000 0.00 0.00 42.05 3.02
3003 6626 1.992667 CGTATTCACGCTGCTTTGAGA 59.007 47.619 0.00 0.00 42.05 3.27
3004 6627 2.604914 CGTATTCACGCTGCTTTGAGAT 59.395 45.455 0.00 0.90 42.05 2.75
3005 6628 3.062639 CGTATTCACGCTGCTTTGAGATT 59.937 43.478 0.00 0.00 42.05 2.40
3006 6629 3.754188 ATTCACGCTGCTTTGAGATTC 57.246 42.857 0.00 0.00 0.00 2.52
3007 6630 1.070821 TCACGCTGCTTTGAGATTCG 58.929 50.000 0.00 0.00 0.00 3.34
3008 6631 1.070821 CACGCTGCTTTGAGATTCGA 58.929 50.000 0.00 0.00 0.00 3.71
3009 6632 1.662629 CACGCTGCTTTGAGATTCGAT 59.337 47.619 0.00 0.00 0.00 3.59
3010 6633 2.094894 CACGCTGCTTTGAGATTCGATT 59.905 45.455 0.00 0.00 0.00 3.34
3011 6634 2.349886 ACGCTGCTTTGAGATTCGATTC 59.650 45.455 0.00 0.00 0.00 2.52
3012 6635 2.349580 CGCTGCTTTGAGATTCGATTCA 59.650 45.455 9.78 0.87 0.00 2.57
3013 6636 3.002042 CGCTGCTTTGAGATTCGATTCAT 59.998 43.478 9.78 0.00 0.00 2.57
3014 6637 4.209911 CGCTGCTTTGAGATTCGATTCATA 59.790 41.667 9.78 0.00 0.00 2.15
3015 6638 5.107182 CGCTGCTTTGAGATTCGATTCATAT 60.107 40.000 9.78 0.00 0.00 1.78
3016 6639 6.565435 CGCTGCTTTGAGATTCGATTCATATT 60.565 38.462 9.78 0.00 0.00 1.28
3017 6640 7.137426 GCTGCTTTGAGATTCGATTCATATTT 58.863 34.615 9.78 0.00 0.00 1.40
3018 6641 7.646922 GCTGCTTTGAGATTCGATTCATATTTT 59.353 33.333 9.78 0.00 0.00 1.82
3019 6642 9.512435 CTGCTTTGAGATTCGATTCATATTTTT 57.488 29.630 9.78 0.00 0.00 1.94
3020 6643 9.507280 TGCTTTGAGATTCGATTCATATTTTTC 57.493 29.630 9.78 0.00 0.00 2.29
3021 6644 9.727627 GCTTTGAGATTCGATTCATATTTTTCT 57.272 29.630 9.78 0.00 0.00 2.52
3025 6648 8.131100 TGAGATTCGATTCATATTTTTCTTGGC 58.869 33.333 9.78 0.00 0.00 4.52
3026 6649 7.428826 AGATTCGATTCATATTTTTCTTGGCC 58.571 34.615 9.78 0.00 0.00 5.36
3027 6650 6.773976 TTCGATTCATATTTTTCTTGGCCT 57.226 33.333 3.32 0.00 0.00 5.19
3028 6651 6.773976 TCGATTCATATTTTTCTTGGCCTT 57.226 33.333 3.32 0.00 0.00 4.35
3029 6652 6.563422 TCGATTCATATTTTTCTTGGCCTTG 58.437 36.000 3.32 0.00 0.00 3.61
3030 6653 6.152661 TCGATTCATATTTTTCTTGGCCTTGT 59.847 34.615 3.32 0.00 0.00 3.16
3031 6654 6.254157 CGATTCATATTTTTCTTGGCCTTGTG 59.746 38.462 3.32 0.00 0.00 3.33
3032 6655 4.819769 TCATATTTTTCTTGGCCTTGTGC 58.180 39.130 3.32 0.00 40.16 4.57
3033 6656 4.282957 TCATATTTTTCTTGGCCTTGTGCA 59.717 37.500 3.32 0.00 43.89 4.57
3034 6657 3.775261 ATTTTTCTTGGCCTTGTGCAT 57.225 38.095 3.32 0.00 43.89 3.96
3035 6658 4.888326 ATTTTTCTTGGCCTTGTGCATA 57.112 36.364 3.32 0.00 43.89 3.14
3036 6659 4.888326 TTTTTCTTGGCCTTGTGCATAT 57.112 36.364 3.32 0.00 43.89 1.78
3037 6660 4.888326 TTTTCTTGGCCTTGTGCATATT 57.112 36.364 3.32 0.00 43.89 1.28
3038 6661 3.872511 TTCTTGGCCTTGTGCATATTG 57.127 42.857 3.32 0.00 43.89 1.90
3039 6662 2.806434 TCTTGGCCTTGTGCATATTGT 58.194 42.857 3.32 0.00 43.89 2.71
3040 6663 3.961849 TCTTGGCCTTGTGCATATTGTA 58.038 40.909 3.32 0.00 43.89 2.41
3041 6664 4.535781 TCTTGGCCTTGTGCATATTGTAT 58.464 39.130 3.32 0.00 43.89 2.29
3042 6665 4.955450 TCTTGGCCTTGTGCATATTGTATT 59.045 37.500 3.32 0.00 43.89 1.89
3043 6666 5.421693 TCTTGGCCTTGTGCATATTGTATTT 59.578 36.000 3.32 0.00 43.89 1.40
3044 6667 5.261209 TGGCCTTGTGCATATTGTATTTC 57.739 39.130 3.32 0.00 43.89 2.17
3045 6668 4.955450 TGGCCTTGTGCATATTGTATTTCT 59.045 37.500 3.32 0.00 43.89 2.52
3046 6669 5.421693 TGGCCTTGTGCATATTGTATTTCTT 59.578 36.000 3.32 0.00 43.89 2.52
3047 6670 6.070881 TGGCCTTGTGCATATTGTATTTCTTT 60.071 34.615 3.32 0.00 43.89 2.52
3048 6671 6.256321 GGCCTTGTGCATATTGTATTTCTTTG 59.744 38.462 0.00 0.00 43.89 2.77
3049 6672 6.237915 GCCTTGTGCATATTGTATTTCTTTGC 60.238 38.462 0.00 0.00 40.77 3.68
3050 6673 6.812656 CCTTGTGCATATTGTATTTCTTTGCA 59.187 34.615 0.00 0.00 36.37 4.08
3051 6674 7.493320 CCTTGTGCATATTGTATTTCTTTGCAT 59.507 33.333 0.00 0.00 40.32 3.96
3052 6675 8.774890 TTGTGCATATTGTATTTCTTTGCATT 57.225 26.923 0.00 0.00 40.32 3.56
3053 6676 8.410030 TGTGCATATTGTATTTCTTTGCATTC 57.590 30.769 0.00 0.00 40.32 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 2.274437 CACGTCCTCCACATCATCAAG 58.726 52.381 0.00 0.00 0.00 3.02
27 28 3.520290 TTCCATCACATACACGTCCTC 57.480 47.619 0.00 0.00 0.00 3.71
31 32 3.334691 CCACTTTCCATCACATACACGT 58.665 45.455 0.00 0.00 0.00 4.49
32 33 2.677836 CCCACTTTCCATCACATACACG 59.322 50.000 0.00 0.00 0.00 4.49
35 36 4.589908 ACTTCCCACTTTCCATCACATAC 58.410 43.478 0.00 0.00 0.00 2.39
83 85 2.407268 TGCCCATGCAAGCTATTCG 58.593 52.632 8.04 0.00 46.66 3.34
117 119 6.438186 TCATCACATATATCCCACACATGT 57.562 37.500 0.00 0.00 0.00 3.21
122 124 4.286808 CCACCTCATCACATATATCCCACA 59.713 45.833 0.00 0.00 0.00 4.17
129 131 7.180766 TGCAATCTATCCACCTCATCACATATA 59.819 37.037 0.00 0.00 0.00 0.86
165 167 8.753497 AAAAGTTCATCCCCACTATCTTATTC 57.247 34.615 0.00 0.00 0.00 1.75
281 2076 8.674263 ACATTTGGCACTTGATTTTGAAATTA 57.326 26.923 3.07 0.00 0.00 1.40
339 2135 5.649557 TGGACACTGAAGTTTGTTTTCATG 58.350 37.500 0.00 0.00 34.33 3.07
364 2160 2.118313 TGAGTGCTGATTGTGATGGG 57.882 50.000 0.00 0.00 0.00 4.00
427 2223 7.759489 TGTAGTTGGATTGCTGAAATTACTT 57.241 32.000 0.00 0.00 0.00 2.24
471 2267 8.906867 AGTAAATGGAATGGATATGTGTTCAAG 58.093 33.333 0.00 0.00 0.00 3.02
492 2288 6.735678 TTGAAATGCAAGCGATCTAGTAAA 57.264 33.333 0.00 0.00 31.55 2.01
557 2353 7.977293 TGCTGAAATGAATATGAACTGAAATGG 59.023 33.333 0.00 0.00 0.00 3.16
634 2431 2.617274 GCCCGAACTGGAGTTGTGC 61.617 63.158 0.00 0.00 42.00 4.57
849 4408 0.676736 AGGAAGGAATCGATCGAGGC 59.323 55.000 23.84 16.53 0.00 4.70
886 4452 9.424319 GCTTATATAGAATTTTCATCACGAGGA 57.576 33.333 0.00 0.00 0.00 3.71
924 4490 2.031919 GTGATGGGTCGGTGTGCA 59.968 61.111 0.00 0.00 0.00 4.57
962 4528 1.061131 AGTCGCGCGATGAAATGAAAG 59.939 47.619 37.03 0.00 0.00 2.62
965 4531 1.145759 GGAGTCGCGCGATGAAATGA 61.146 55.000 37.03 7.80 0.00 2.57
987 4571 0.317938 CCGCCATCACTAGCTCGTAC 60.318 60.000 0.00 0.00 0.00 3.67
1024 4608 1.065764 CGAGCACTACGCAGGCATA 59.934 57.895 0.00 0.00 46.13 3.14
1146 4730 2.685017 AGCGAGATGACCTGGCCA 60.685 61.111 4.71 4.71 46.27 5.36
1353 4939 8.972262 AGTATTTACACTGATATGTATGAGCG 57.028 34.615 0.00 0.00 35.04 5.03
1391 4977 2.609299 TTCGCCCATGACCCCTCA 60.609 61.111 0.00 0.00 0.00 3.86
1578 5164 0.613292 ACTCGGTCTGCTCACAGGAT 60.613 55.000 0.00 0.00 44.59 3.24
1647 5233 0.659417 TTCGCGTCGACTGTCAGTTC 60.659 55.000 14.70 0.00 34.89 3.01
1679 5265 0.107800 ACGCTGCAGAGCATCAAGAT 60.108 50.000 20.43 0.00 46.62 2.40
1680 5266 1.017701 CACGCTGCAGAGCATCAAGA 61.018 55.000 20.43 0.00 46.62 3.02
1682 5268 2.683859 GCACGCTGCAGAGCATCAA 61.684 57.895 20.43 0.00 46.62 2.57
1683 5269 3.122971 GCACGCTGCAGAGCATCA 61.123 61.111 20.43 0.00 46.62 3.07
1731 5317 3.047877 CCTTGTCGGCGTGGTTCC 61.048 66.667 6.85 0.00 0.00 3.62
1741 5327 4.728102 TACGCCACGCCCTTGTCG 62.728 66.667 0.00 0.00 0.00 4.35
1979 5565 2.411748 CGCAGTAGTTGTACACCATGTG 59.588 50.000 0.00 0.00 39.75 3.21
2080 5666 6.264744 ACTCTGCACTCAAAGTAGTTGTACTA 59.735 38.462 0.00 0.00 38.66 1.82
2081 5667 5.069251 ACTCTGCACTCAAAGTAGTTGTACT 59.931 40.000 0.00 0.00 41.61 2.73
2082 5668 5.290386 ACTCTGCACTCAAAGTAGTTGTAC 58.710 41.667 0.00 0.00 38.47 2.90
2083 5669 5.529791 GACTCTGCACTCAAAGTAGTTGTA 58.470 41.667 0.00 0.00 38.47 2.41
2128 5714 1.813178 TGAGGTCAACTCTGCTCTACG 59.187 52.381 0.00 0.00 46.72 3.51
2129 5715 4.464069 AATGAGGTCAACTCTGCTCTAC 57.536 45.455 0.00 0.00 46.72 2.59
2130 5716 5.489792 AAAATGAGGTCAACTCTGCTCTA 57.510 39.130 0.00 0.00 46.72 2.43
2131 5717 4.363991 AAAATGAGGTCAACTCTGCTCT 57.636 40.909 0.00 0.00 46.72 4.09
2197 5820 7.277174 TGTCTGCGCATGTATATATAGCTAT 57.723 36.000 12.24 11.77 0.00 2.97
2212 5835 0.956902 AGCATGAACATGTCTGCGCA 60.957 50.000 10.98 10.98 40.80 6.09
2213 5836 1.009078 TAGCATGAACATGTCTGCGC 58.991 50.000 17.28 0.00 40.80 6.09
2220 5843 4.449131 AGATGGACAGTAGCATGAACATG 58.551 43.478 10.04 10.04 41.60 3.21
2233 5856 7.170965 ACATGCCCTAAATATAAGATGGACAG 58.829 38.462 0.00 0.00 0.00 3.51
2264 5887 8.975827 GGCAACATATGACAAAGGTATTCACCA 61.976 40.741 10.38 0.00 41.70 4.17
2312 5935 5.993748 AACAGGAGTGGTTTTCTCAAAAA 57.006 34.783 0.00 0.00 34.04 1.94
2313 5936 5.337169 CCAAACAGGAGTGGTTTTCTCAAAA 60.337 40.000 0.00 0.00 41.22 2.44
2314 5937 4.159506 CCAAACAGGAGTGGTTTTCTCAAA 59.840 41.667 0.00 0.00 41.22 2.69
2315 5938 3.699038 CCAAACAGGAGTGGTTTTCTCAA 59.301 43.478 0.00 0.00 41.22 3.02
2316 5939 3.053991 TCCAAACAGGAGTGGTTTTCTCA 60.054 43.478 0.00 0.00 43.07 3.27
2317 5940 3.551846 TCCAAACAGGAGTGGTTTTCTC 58.448 45.455 0.00 0.00 43.07 2.87
2318 5941 3.662759 TCCAAACAGGAGTGGTTTTCT 57.337 42.857 0.00 0.00 43.07 2.52
2328 5951 1.053424 AACCTACGCTCCAAACAGGA 58.947 50.000 0.00 0.00 46.75 3.86
2329 5952 1.892209 AAACCTACGCTCCAAACAGG 58.108 50.000 0.00 0.00 39.47 4.00
2330 5953 3.982576 AAAAACCTACGCTCCAAACAG 57.017 42.857 0.00 0.00 0.00 3.16
2350 5973 1.642753 GTCACCGCGTTCCGAAAAA 59.357 52.632 4.92 0.00 40.02 1.94
2351 5974 2.587679 CGTCACCGCGTTCCGAAAA 61.588 57.895 4.92 0.00 40.02 2.29
2352 5975 2.399511 TACGTCACCGCGTTCCGAAA 62.400 55.000 4.92 0.00 43.04 3.46
2353 5976 2.399511 TTACGTCACCGCGTTCCGAA 62.400 55.000 4.92 0.00 43.04 4.30
2354 5977 2.784957 CTTACGTCACCGCGTTCCGA 62.785 60.000 4.92 0.00 43.04 4.55
2355 5978 2.428902 TTACGTCACCGCGTTCCG 60.429 61.111 4.92 4.15 43.04 4.30
2356 5979 2.723719 GCTTACGTCACCGCGTTCC 61.724 63.158 4.92 0.00 43.04 3.62
2357 5980 1.280206 AAGCTTACGTCACCGCGTTC 61.280 55.000 4.92 0.00 43.04 3.95
2358 5981 0.039256 TAAGCTTACGTCACCGCGTT 60.039 50.000 4.92 0.00 43.04 4.84
2360 5983 1.986154 GTAAGCTTACGTCACCGCG 59.014 57.895 20.28 0.00 37.70 6.46
2369 5992 0.468648 ATCCCAGCCCGTAAGCTTAC 59.531 55.000 24.05 24.05 42.61 2.34
2370 5993 1.968493 CTATCCCAGCCCGTAAGCTTA 59.032 52.381 0.86 0.86 42.61 3.09
2371 5994 0.759346 CTATCCCAGCCCGTAAGCTT 59.241 55.000 3.48 3.48 42.61 3.74
2372 5995 1.122019 CCTATCCCAGCCCGTAAGCT 61.122 60.000 0.00 0.00 46.45 3.74
2373 5996 1.371558 CCTATCCCAGCCCGTAAGC 59.628 63.158 0.00 0.00 0.00 3.09
2374 5997 1.129058 AACCTATCCCAGCCCGTAAG 58.871 55.000 0.00 0.00 0.00 2.34
2375 5998 2.475339 TAACCTATCCCAGCCCGTAA 57.525 50.000 0.00 0.00 0.00 3.18
2376 5999 2.475339 TTAACCTATCCCAGCCCGTA 57.525 50.000 0.00 0.00 0.00 4.02
2377 6000 1.420138 CATTAACCTATCCCAGCCCGT 59.580 52.381 0.00 0.00 0.00 5.28
2378 6001 1.271379 CCATTAACCTATCCCAGCCCG 60.271 57.143 0.00 0.00 0.00 6.13
2379 6002 1.075536 CCCATTAACCTATCCCAGCCC 59.924 57.143 0.00 0.00 0.00 5.19
2380 6003 1.547901 GCCCATTAACCTATCCCAGCC 60.548 57.143 0.00 0.00 0.00 4.85
2381 6004 1.425448 AGCCCATTAACCTATCCCAGC 59.575 52.381 0.00 0.00 0.00 4.85
2382 6005 4.168101 TCTAGCCCATTAACCTATCCCAG 58.832 47.826 0.00 0.00 0.00 4.45
2383 6006 4.222333 TCTAGCCCATTAACCTATCCCA 57.778 45.455 0.00 0.00 0.00 4.37
2384 6007 4.597940 ACTTCTAGCCCATTAACCTATCCC 59.402 45.833 0.00 0.00 0.00 3.85
2385 6008 5.513267 CCACTTCTAGCCCATTAACCTATCC 60.513 48.000 0.00 0.00 0.00 2.59
2386 6009 5.552178 CCACTTCTAGCCCATTAACCTATC 58.448 45.833 0.00 0.00 0.00 2.08
2387 6010 4.202472 GCCACTTCTAGCCCATTAACCTAT 60.202 45.833 0.00 0.00 0.00 2.57
2388 6011 3.135895 GCCACTTCTAGCCCATTAACCTA 59.864 47.826 0.00 0.00 0.00 3.08
2389 6012 2.092375 GCCACTTCTAGCCCATTAACCT 60.092 50.000 0.00 0.00 0.00 3.50
2390 6013 2.298610 GCCACTTCTAGCCCATTAACC 58.701 52.381 0.00 0.00 0.00 2.85
2391 6014 2.298610 GGCCACTTCTAGCCCATTAAC 58.701 52.381 0.00 0.00 43.76 2.01
2392 6015 2.729028 GGCCACTTCTAGCCCATTAA 57.271 50.000 0.00 0.00 43.76 1.40
2399 6022 2.290071 TGTAAACTGGGCCACTTCTAGC 60.290 50.000 0.00 0.00 0.00 3.42
2400 6023 3.695830 TGTAAACTGGGCCACTTCTAG 57.304 47.619 0.00 0.00 0.00 2.43
2401 6024 4.440826 TTTGTAAACTGGGCCACTTCTA 57.559 40.909 0.00 0.00 0.00 2.10
2402 6025 3.306472 TTTGTAAACTGGGCCACTTCT 57.694 42.857 0.00 0.00 0.00 2.85
2403 6026 4.600692 ATTTTGTAAACTGGGCCACTTC 57.399 40.909 0.00 0.00 0.00 3.01
2404 6027 5.600898 AGTTATTTTGTAAACTGGGCCACTT 59.399 36.000 0.00 1.07 34.70 3.16
2405 6028 5.144832 AGTTATTTTGTAAACTGGGCCACT 58.855 37.500 0.00 0.00 34.70 4.00
2406 6029 5.462530 AGTTATTTTGTAAACTGGGCCAC 57.537 39.130 0.00 0.00 34.70 5.01
2407 6030 4.216687 CGAGTTATTTTGTAAACTGGGCCA 59.783 41.667 5.85 5.85 36.10 5.36
2408 6031 4.380128 CCGAGTTATTTTGTAAACTGGGCC 60.380 45.833 0.00 0.00 42.28 5.80
2409 6032 4.729595 CCGAGTTATTTTGTAAACTGGGC 58.270 43.478 3.78 0.00 42.28 5.36
2411 6034 8.637281 AAAAACCGAGTTATTTTGTAAACTGG 57.363 30.769 0.00 0.00 36.10 4.00
2433 6056 2.571212 TCAGCTGCTCCGAAAGAAAAA 58.429 42.857 9.47 0.00 0.00 1.94
2434 6057 2.254546 TCAGCTGCTCCGAAAGAAAA 57.745 45.000 9.47 0.00 0.00 2.29
2435 6058 1.873591 GTTCAGCTGCTCCGAAAGAAA 59.126 47.619 9.47 0.00 0.00 2.52
2436 6059 1.512926 GTTCAGCTGCTCCGAAAGAA 58.487 50.000 9.47 0.00 0.00 2.52
2437 6060 0.320771 GGTTCAGCTGCTCCGAAAGA 60.321 55.000 9.47 0.00 0.00 2.52
2438 6061 0.321122 AGGTTCAGCTGCTCCGAAAG 60.321 55.000 9.47 0.00 0.00 2.62
2439 6062 0.973632 TAGGTTCAGCTGCTCCGAAA 59.026 50.000 9.47 0.00 0.00 3.46
2440 6063 0.973632 TTAGGTTCAGCTGCTCCGAA 59.026 50.000 9.47 12.83 0.00 4.30
2441 6064 0.246635 GTTAGGTTCAGCTGCTCCGA 59.753 55.000 9.47 7.26 0.00 4.55
2442 6065 0.037326 TGTTAGGTTCAGCTGCTCCG 60.037 55.000 9.47 0.00 0.00 4.63
2443 6066 1.002544 ACTGTTAGGTTCAGCTGCTCC 59.997 52.381 9.47 13.52 36.50 4.70
2444 6067 2.464157 ACTGTTAGGTTCAGCTGCTC 57.536 50.000 9.47 4.05 36.50 4.26
2445 6068 2.938956 AACTGTTAGGTTCAGCTGCT 57.061 45.000 9.47 2.89 36.50 4.24
2446 6069 2.416893 GCTAACTGTTAGGTTCAGCTGC 59.583 50.000 24.56 7.99 36.50 5.25
2447 6070 3.003480 GGCTAACTGTTAGGTTCAGCTG 58.997 50.000 24.56 7.63 36.50 4.24
2448 6071 2.027100 GGGCTAACTGTTAGGTTCAGCT 60.027 50.000 24.56 0.00 36.50 4.24
2449 6072 2.290071 TGGGCTAACTGTTAGGTTCAGC 60.290 50.000 24.56 14.19 36.50 4.26
2450 6073 3.335579 GTGGGCTAACTGTTAGGTTCAG 58.664 50.000 24.56 5.67 38.68 3.02
2451 6074 2.289195 CGTGGGCTAACTGTTAGGTTCA 60.289 50.000 24.56 8.89 33.80 3.18
2452 6075 2.344025 CGTGGGCTAACTGTTAGGTTC 58.656 52.381 24.56 11.18 33.80 3.62
2453 6076 1.609841 GCGTGGGCTAACTGTTAGGTT 60.610 52.381 24.56 0.00 35.83 3.50
2454 6077 0.036671 GCGTGGGCTAACTGTTAGGT 60.037 55.000 24.56 0.00 35.83 3.08
2455 6078 1.082117 CGCGTGGGCTAACTGTTAGG 61.082 60.000 24.56 11.62 36.88 2.69
2456 6079 0.389426 ACGCGTGGGCTAACTGTTAG 60.389 55.000 20.54 20.54 36.88 2.34
2457 6080 0.668096 CACGCGTGGGCTAACTGTTA 60.668 55.000 31.15 0.00 36.88 2.41
2458 6081 1.959226 CACGCGTGGGCTAACTGTT 60.959 57.895 31.15 0.00 36.88 3.16
2459 6082 2.357034 CACGCGTGGGCTAACTGT 60.357 61.111 31.15 0.00 36.88 3.55
2460 6083 3.118454 CCACGCGTGGGCTAACTG 61.118 66.667 43.64 20.49 46.81 3.16
2469 6092 3.268603 TGTGCACTTCCACGCGTG 61.269 61.111 31.77 31.77 38.55 5.34
2470 6093 3.269347 GTGTGCACTTCCACGCGT 61.269 61.111 19.41 5.58 38.55 6.01
2471 6094 2.316361 TTTGTGTGCACTTCCACGCG 62.316 55.000 19.41 3.53 46.39 6.01
2472 6095 0.030638 ATTTGTGTGCACTTCCACGC 59.969 50.000 19.41 0.00 44.34 5.34
2473 6096 1.603802 AGATTTGTGTGCACTTCCACG 59.396 47.619 19.41 0.00 38.55 4.94
2474 6097 4.537015 GTTAGATTTGTGTGCACTTCCAC 58.463 43.478 19.41 8.36 36.28 4.02
2475 6098 3.249799 CGTTAGATTTGTGTGCACTTCCA 59.750 43.478 19.41 9.28 0.00 3.53
2476 6099 3.364964 CCGTTAGATTTGTGTGCACTTCC 60.365 47.826 19.41 6.60 0.00 3.46
2477 6100 3.810373 CCGTTAGATTTGTGTGCACTTC 58.190 45.455 19.41 11.68 0.00 3.01
2478 6101 2.031157 GCCGTTAGATTTGTGTGCACTT 60.031 45.455 19.41 0.00 0.00 3.16
2479 6102 1.535462 GCCGTTAGATTTGTGTGCACT 59.465 47.619 19.41 0.00 0.00 4.40
2480 6103 1.265635 TGCCGTTAGATTTGTGTGCAC 59.734 47.619 10.75 10.75 0.00 4.57
2481 6104 1.598882 TGCCGTTAGATTTGTGTGCA 58.401 45.000 0.00 0.00 0.00 4.57
2482 6105 2.919666 ATGCCGTTAGATTTGTGTGC 57.080 45.000 0.00 0.00 0.00 4.57
2483 6106 4.034048 GTCCTATGCCGTTAGATTTGTGTG 59.966 45.833 0.00 0.00 0.00 3.82
2484 6107 4.189231 GTCCTATGCCGTTAGATTTGTGT 58.811 43.478 0.00 0.00 0.00 3.72
2485 6108 3.245284 CGTCCTATGCCGTTAGATTTGTG 59.755 47.826 0.00 0.00 0.00 3.33
2486 6109 3.131577 TCGTCCTATGCCGTTAGATTTGT 59.868 43.478 0.00 0.00 0.00 2.83
2487 6110 3.489785 GTCGTCCTATGCCGTTAGATTTG 59.510 47.826 0.00 0.00 0.00 2.32
2488 6111 3.492137 GGTCGTCCTATGCCGTTAGATTT 60.492 47.826 0.00 0.00 0.00 2.17
2489 6112 2.035576 GGTCGTCCTATGCCGTTAGATT 59.964 50.000 0.00 0.00 0.00 2.40
2490 6113 1.612463 GGTCGTCCTATGCCGTTAGAT 59.388 52.381 0.00 0.00 0.00 1.98
2491 6114 1.027357 GGTCGTCCTATGCCGTTAGA 58.973 55.000 0.00 0.00 0.00 2.10
2492 6115 0.317603 CGGTCGTCCTATGCCGTTAG 60.318 60.000 0.00 0.00 39.41 2.34
2493 6116 1.727511 CCGGTCGTCCTATGCCGTTA 61.728 60.000 0.00 0.00 42.36 3.18
2494 6117 2.493030 CGGTCGTCCTATGCCGTT 59.507 61.111 0.00 0.00 39.41 4.44
2495 6118 3.524606 CCGGTCGTCCTATGCCGT 61.525 66.667 0.00 0.00 42.36 5.68
2496 6119 4.280494 CCCGGTCGTCCTATGCCG 62.280 72.222 0.00 0.00 43.40 5.69
2497 6120 4.603946 GCCCGGTCGTCCTATGCC 62.604 72.222 0.00 0.00 0.00 4.40
2498 6121 4.603946 GGCCCGGTCGTCCTATGC 62.604 72.222 0.00 0.00 0.00 3.14
2499 6122 3.151710 TGGCCCGGTCGTCCTATG 61.152 66.667 0.00 0.00 0.00 2.23
2500 6123 2.838225 CTGGCCCGGTCGTCCTAT 60.838 66.667 0.00 0.00 0.00 2.57
2501 6124 3.588817 TTCTGGCCCGGTCGTCCTA 62.589 63.158 0.00 0.00 0.00 2.94
2503 6126 4.452733 CTTCTGGCCCGGTCGTCC 62.453 72.222 0.00 0.00 0.00 4.79
2504 6127 4.452733 CCTTCTGGCCCGGTCGTC 62.453 72.222 0.00 0.00 0.00 4.20
2506 6129 4.452733 GACCTTCTGGCCCGGTCG 62.453 72.222 12.87 0.00 38.00 4.79
2507 6130 4.452733 CGACCTTCTGGCCCGGTC 62.453 72.222 16.43 16.43 42.90 4.79
2509 6132 3.702048 TTCGACCTTCTGGCCCGG 61.702 66.667 0.00 0.00 36.63 5.73
2510 6133 2.434359 GTTCGACCTTCTGGCCCG 60.434 66.667 0.00 0.00 36.63 6.13
2511 6134 2.434359 CGTTCGACCTTCTGGCCC 60.434 66.667 0.00 0.00 36.63 5.80
2512 6135 2.434359 CCGTTCGACCTTCTGGCC 60.434 66.667 0.00 0.00 36.63 5.36
2513 6136 2.221906 TAGCCGTTCGACCTTCTGGC 62.222 60.000 0.00 0.00 42.76 4.85
2514 6137 0.245539 TTAGCCGTTCGACCTTCTGG 59.754 55.000 0.00 0.00 39.83 3.86
2515 6138 2.074547 TTTAGCCGTTCGACCTTCTG 57.925 50.000 0.00 0.00 0.00 3.02
2516 6139 2.825861 TTTTAGCCGTTCGACCTTCT 57.174 45.000 0.00 0.00 0.00 2.85
2517 6140 4.389687 TGTATTTTTAGCCGTTCGACCTTC 59.610 41.667 0.00 0.00 0.00 3.46
2518 6141 4.152938 GTGTATTTTTAGCCGTTCGACCTT 59.847 41.667 0.00 0.00 0.00 3.50
2519 6142 3.681417 GTGTATTTTTAGCCGTTCGACCT 59.319 43.478 0.00 0.00 0.00 3.85
2520 6143 3.432933 TGTGTATTTTTAGCCGTTCGACC 59.567 43.478 0.00 0.00 0.00 4.79
2521 6144 4.650545 TGTGTATTTTTAGCCGTTCGAC 57.349 40.909 0.00 0.00 0.00 4.20
2522 6145 4.093703 CCATGTGTATTTTTAGCCGTTCGA 59.906 41.667 0.00 0.00 0.00 3.71
2523 6146 4.339429 CCATGTGTATTTTTAGCCGTTCG 58.661 43.478 0.00 0.00 0.00 3.95
2524 6147 4.102649 GCCATGTGTATTTTTAGCCGTTC 58.897 43.478 0.00 0.00 0.00 3.95
2525 6148 3.426963 CGCCATGTGTATTTTTAGCCGTT 60.427 43.478 0.00 0.00 0.00 4.44
2526 6149 2.096819 CGCCATGTGTATTTTTAGCCGT 59.903 45.455 0.00 0.00 0.00 5.68
2527 6150 2.096819 ACGCCATGTGTATTTTTAGCCG 59.903 45.455 0.00 0.00 0.00 5.52
2528 6151 3.127895 TGACGCCATGTGTATTTTTAGCC 59.872 43.478 0.00 0.00 0.00 3.93
2529 6152 4.094294 TCTGACGCCATGTGTATTTTTAGC 59.906 41.667 0.00 0.00 0.00 3.09
2530 6153 5.794687 TCTGACGCCATGTGTATTTTTAG 57.205 39.130 0.00 0.00 0.00 1.85
2531 6154 5.390040 CGTTCTGACGCCATGTGTATTTTTA 60.390 40.000 0.00 0.00 43.03 1.52
2532 6155 4.612712 CGTTCTGACGCCATGTGTATTTTT 60.613 41.667 0.00 0.00 43.03 1.94
2533 6156 3.120338 CGTTCTGACGCCATGTGTATTTT 60.120 43.478 0.00 0.00 43.03 1.82
2534 6157 2.415168 CGTTCTGACGCCATGTGTATTT 59.585 45.455 0.00 0.00 43.03 1.40
2535 6158 1.999735 CGTTCTGACGCCATGTGTATT 59.000 47.619 0.00 0.00 43.03 1.89
2536 6159 1.640428 CGTTCTGACGCCATGTGTAT 58.360 50.000 0.00 0.00 43.03 2.29
2537 6160 3.116073 CGTTCTGACGCCATGTGTA 57.884 52.632 0.00 0.00 43.03 2.90
2538 6161 3.951332 CGTTCTGACGCCATGTGT 58.049 55.556 0.00 0.00 43.03 3.72
2547 6170 1.197036 GCCTAAACCAAGCGTTCTGAC 59.803 52.381 0.00 0.00 31.78 3.51
2548 6171 1.071699 AGCCTAAACCAAGCGTTCTGA 59.928 47.619 0.00 0.00 31.78 3.27
2549 6172 1.464997 GAGCCTAAACCAAGCGTTCTG 59.535 52.381 0.00 0.00 31.78 3.02
2550 6173 1.071699 TGAGCCTAAACCAAGCGTTCT 59.928 47.619 0.00 0.00 31.78 3.01
2551 6174 1.464997 CTGAGCCTAAACCAAGCGTTC 59.535 52.381 0.00 0.00 31.78 3.95
2552 6175 1.202770 ACTGAGCCTAAACCAAGCGTT 60.203 47.619 0.00 0.00 35.70 4.84
2553 6176 0.396811 ACTGAGCCTAAACCAAGCGT 59.603 50.000 0.00 0.00 0.00 5.07
2554 6177 1.523758 AACTGAGCCTAAACCAAGCG 58.476 50.000 0.00 0.00 0.00 4.68
2555 6178 4.519350 AGTAAAACTGAGCCTAAACCAAGC 59.481 41.667 0.00 0.00 0.00 4.01
2578 6201 9.362151 GGGGTATAATTGATCATTTTTAGGACA 57.638 33.333 8.07 0.00 0.00 4.02
2579 6202 9.588096 AGGGGTATAATTGATCATTTTTAGGAC 57.412 33.333 8.07 4.76 0.00 3.85
2580 6203 9.807921 GAGGGGTATAATTGATCATTTTTAGGA 57.192 33.333 8.07 0.00 0.00 2.94
2581 6204 8.730680 CGAGGGGTATAATTGATCATTTTTAGG 58.269 37.037 8.07 0.00 0.00 2.69
2582 6205 9.284968 ACGAGGGGTATAATTGATCATTTTTAG 57.715 33.333 8.07 0.00 0.00 1.85
2583 6206 9.062524 CACGAGGGGTATAATTGATCATTTTTA 57.937 33.333 8.07 2.91 0.00 1.52
2584 6207 7.777910 TCACGAGGGGTATAATTGATCATTTTT 59.222 33.333 8.07 3.80 0.00 1.94
2585 6208 7.287061 TCACGAGGGGTATAATTGATCATTTT 58.713 34.615 8.07 2.85 0.00 1.82
2586 6209 6.837312 TCACGAGGGGTATAATTGATCATTT 58.163 36.000 7.88 7.88 0.00 2.32
2587 6210 6.433847 TCACGAGGGGTATAATTGATCATT 57.566 37.500 0.00 0.00 0.00 2.57
2588 6211 6.627087 ATCACGAGGGGTATAATTGATCAT 57.373 37.500 0.00 0.00 0.00 2.45
2589 6212 6.433847 AATCACGAGGGGTATAATTGATCA 57.566 37.500 0.00 0.00 0.00 2.92
2590 6213 7.829378 GTAATCACGAGGGGTATAATTGATC 57.171 40.000 0.00 0.00 0.00 2.92
2607 6230 3.684788 ACTGAAGCCATTGTCGTAATCAC 59.315 43.478 0.00 0.00 0.00 3.06
2608 6231 3.937814 ACTGAAGCCATTGTCGTAATCA 58.062 40.909 0.00 0.00 0.00 2.57
2609 6232 5.109903 ACTACTGAAGCCATTGTCGTAATC 58.890 41.667 0.00 0.00 0.00 1.75
2610 6233 5.086104 ACTACTGAAGCCATTGTCGTAAT 57.914 39.130 0.00 0.00 0.00 1.89
2611 6234 4.491676 GACTACTGAAGCCATTGTCGTAA 58.508 43.478 0.00 0.00 0.00 3.18
2612 6235 3.119245 GGACTACTGAAGCCATTGTCGTA 60.119 47.826 0.00 0.00 0.00 3.43
2613 6236 2.353803 GGACTACTGAAGCCATTGTCGT 60.354 50.000 0.00 0.00 0.00 4.34
2614 6237 2.093973 AGGACTACTGAAGCCATTGTCG 60.094 50.000 0.00 0.00 0.00 4.35
2615 6238 3.618690 AGGACTACTGAAGCCATTGTC 57.381 47.619 0.00 0.00 0.00 3.18
2616 6239 3.327757 TCAAGGACTACTGAAGCCATTGT 59.672 43.478 0.00 0.00 0.00 2.71
2617 6240 3.942829 TCAAGGACTACTGAAGCCATTG 58.057 45.455 0.00 0.00 0.00 2.82
2618 6241 4.018960 ACATCAAGGACTACTGAAGCCATT 60.019 41.667 0.00 0.00 0.00 3.16
2619 6242 3.521126 ACATCAAGGACTACTGAAGCCAT 59.479 43.478 0.00 0.00 0.00 4.40
2620 6243 2.906389 ACATCAAGGACTACTGAAGCCA 59.094 45.455 0.00 0.00 0.00 4.75
2621 6244 3.265791 CACATCAAGGACTACTGAAGCC 58.734 50.000 0.00 0.00 0.00 4.35
2622 6245 2.675348 GCACATCAAGGACTACTGAAGC 59.325 50.000 0.00 0.00 0.00 3.86
2623 6246 4.199432 AGCACATCAAGGACTACTGAAG 57.801 45.455 0.00 0.00 0.00 3.02
2624 6247 4.623932 AAGCACATCAAGGACTACTGAA 57.376 40.909 0.00 0.00 0.00 3.02
2625 6248 4.040339 TGAAAGCACATCAAGGACTACTGA 59.960 41.667 0.00 0.00 0.00 3.41
2626 6249 4.318332 TGAAAGCACATCAAGGACTACTG 58.682 43.478 0.00 0.00 0.00 2.74
2627 6250 4.623932 TGAAAGCACATCAAGGACTACT 57.376 40.909 0.00 0.00 0.00 2.57
2628 6251 5.886960 AATGAAAGCACATCAAGGACTAC 57.113 39.130 0.00 0.00 0.00 2.73
2629 6252 6.003326 TGAAATGAAAGCACATCAAGGACTA 58.997 36.000 0.00 0.00 0.00 2.59
2630 6253 4.828939 TGAAATGAAAGCACATCAAGGACT 59.171 37.500 0.00 0.00 0.00 3.85
2631 6254 5.125100 TGAAATGAAAGCACATCAAGGAC 57.875 39.130 0.00 0.00 0.00 3.85
2632 6255 5.988310 ATGAAATGAAAGCACATCAAGGA 57.012 34.783 0.00 0.00 0.00 3.36
2633 6256 8.437742 GTTAAATGAAATGAAAGCACATCAAGG 58.562 33.333 0.00 0.00 0.00 3.61
2634 6257 9.199982 AGTTAAATGAAATGAAAGCACATCAAG 57.800 29.630 0.00 0.00 0.00 3.02
2635 6258 9.195411 GAGTTAAATGAAATGAAAGCACATCAA 57.805 29.630 0.00 0.00 0.00 2.57
2636 6259 8.579006 AGAGTTAAATGAAATGAAAGCACATCA 58.421 29.630 0.00 0.00 0.00 3.07
2637 6260 8.976986 AGAGTTAAATGAAATGAAAGCACATC 57.023 30.769 0.00 0.00 0.00 3.06
2638 6261 9.768662 AAAGAGTTAAATGAAATGAAAGCACAT 57.231 25.926 0.00 0.00 0.00 3.21
2646 6269 9.567776 TCTGGTGTAAAGAGTTAAATGAAATGA 57.432 29.630 0.00 0.00 0.00 2.57
2665 6288 9.574516 AAGTTTGTCTTAAGATAAATCTGGTGT 57.425 29.630 24.56 10.15 37.45 4.16
2780 6403 8.506437 CGCAATACATACCAAATCACTATCATT 58.494 33.333 0.00 0.00 0.00 2.57
2781 6404 7.877612 TCGCAATACATACCAAATCACTATCAT 59.122 33.333 0.00 0.00 0.00 2.45
2782 6405 7.213678 TCGCAATACATACCAAATCACTATCA 58.786 34.615 0.00 0.00 0.00 2.15
2783 6406 7.652300 TCGCAATACATACCAAATCACTATC 57.348 36.000 0.00 0.00 0.00 2.08
2784 6407 7.307160 CGTTCGCAATACATACCAAATCACTAT 60.307 37.037 0.00 0.00 0.00 2.12
2785 6408 6.019398 CGTTCGCAATACATACCAAATCACTA 60.019 38.462 0.00 0.00 0.00 2.74
2786 6409 5.220586 CGTTCGCAATACATACCAAATCACT 60.221 40.000 0.00 0.00 0.00 3.41
2787 6410 4.961551 CGTTCGCAATACATACCAAATCAC 59.038 41.667 0.00 0.00 0.00 3.06
2788 6411 4.632251 ACGTTCGCAATACATACCAAATCA 59.368 37.500 0.00 0.00 0.00 2.57
2789 6412 5.151632 ACGTTCGCAATACATACCAAATC 57.848 39.130 0.00 0.00 0.00 2.17
2790 6413 5.122554 TGAACGTTCGCAATACATACCAAAT 59.877 36.000 22.48 0.00 0.00 2.32
2791 6414 4.451435 TGAACGTTCGCAATACATACCAAA 59.549 37.500 22.48 0.00 0.00 3.28
2792 6415 3.995048 TGAACGTTCGCAATACATACCAA 59.005 39.130 22.48 0.00 0.00 3.67
2793 6416 3.586892 TGAACGTTCGCAATACATACCA 58.413 40.909 22.48 0.00 0.00 3.25
2794 6417 4.789095 ATGAACGTTCGCAATACATACC 57.211 40.909 22.48 0.00 0.00 2.73
2795 6418 6.032722 AGAATGAACGTTCGCAATACATAC 57.967 37.500 22.48 5.74 33.36 2.39
2796 6419 6.656314 AAGAATGAACGTTCGCAATACATA 57.344 33.333 22.48 2.77 33.36 2.29
2797 6420 5.545658 AAGAATGAACGTTCGCAATACAT 57.454 34.783 22.48 7.15 33.36 2.29
2798 6421 5.351233 AAAGAATGAACGTTCGCAATACA 57.649 34.783 22.48 4.95 33.36 2.29
2799 6422 6.577427 AGAAAAAGAATGAACGTTCGCAATAC 59.423 34.615 22.48 10.73 33.36 1.89
2800 6423 6.664515 AGAAAAAGAATGAACGTTCGCAATA 58.335 32.000 22.48 5.77 33.36 1.90
2801 6424 5.519722 AGAAAAAGAATGAACGTTCGCAAT 58.480 33.333 22.48 8.68 33.36 3.56
2802 6425 4.915704 AGAAAAAGAATGAACGTTCGCAA 58.084 34.783 22.48 6.54 33.36 4.85
2803 6426 4.545823 AGAAAAAGAATGAACGTTCGCA 57.454 36.364 22.48 7.98 33.36 5.10
2804 6427 8.564766 GTTTATAGAAAAAGAATGAACGTTCGC 58.435 33.333 22.48 14.35 33.36 4.70
2805 6428 9.807386 AGTTTATAGAAAAAGAATGAACGTTCG 57.193 29.630 22.48 0.00 33.36 3.95
2816 6439 8.799367 GGGTTTGGCTAAGTTTATAGAAAAAGA 58.201 33.333 0.00 0.00 0.00 2.52
2817 6440 8.803235 AGGGTTTGGCTAAGTTTATAGAAAAAG 58.197 33.333 0.00 0.00 0.00 2.27
2818 6441 8.715190 AGGGTTTGGCTAAGTTTATAGAAAAA 57.285 30.769 0.00 0.00 0.00 1.94
2819 6442 9.234827 GTAGGGTTTGGCTAAGTTTATAGAAAA 57.765 33.333 0.00 0.00 0.00 2.29
2820 6443 8.384718 TGTAGGGTTTGGCTAAGTTTATAGAAA 58.615 33.333 0.00 0.00 0.00 2.52
2821 6444 7.920227 TGTAGGGTTTGGCTAAGTTTATAGAA 58.080 34.615 0.00 0.00 0.00 2.10
2822 6445 7.499200 TGTAGGGTTTGGCTAAGTTTATAGA 57.501 36.000 0.00 0.00 0.00 1.98
2823 6446 8.747538 ATTGTAGGGTTTGGCTAAGTTTATAG 57.252 34.615 0.00 0.00 0.00 1.31
2825 6448 9.709387 AATATTGTAGGGTTTGGCTAAGTTTAT 57.291 29.630 0.00 0.00 0.00 1.40
2826 6449 9.536510 AAATATTGTAGGGTTTGGCTAAGTTTA 57.463 29.630 0.00 0.00 0.00 2.01
2827 6450 8.430573 AAATATTGTAGGGTTTGGCTAAGTTT 57.569 30.769 0.00 0.00 0.00 2.66
2828 6451 9.536510 TTAAATATTGTAGGGTTTGGCTAAGTT 57.463 29.630 0.00 0.00 0.00 2.66
2829 6452 8.963725 GTTAAATATTGTAGGGTTTGGCTAAGT 58.036 33.333 0.00 0.00 0.00 2.24
2830 6453 9.185680 AGTTAAATATTGTAGGGTTTGGCTAAG 57.814 33.333 0.00 0.00 0.00 2.18
2831 6454 9.536510 AAGTTAAATATTGTAGGGTTTGGCTAA 57.463 29.630 0.00 0.00 0.00 3.09
2833 6456 8.963725 GTAAGTTAAATATTGTAGGGTTTGGCT 58.036 33.333 0.00 0.00 0.00 4.75
2834 6457 7.911727 CGTAAGTTAAATATTGTAGGGTTTGGC 59.088 37.037 0.00 0.00 0.00 4.52
2835 6458 9.165035 TCGTAAGTTAAATATTGTAGGGTTTGG 57.835 33.333 0.00 0.00 39.48 3.28
2850 6473 9.681692 TCGCATATTAGCTTATCGTAAGTTAAA 57.318 29.630 13.56 7.62 39.48 1.52
2851 6474 9.681692 TTCGCATATTAGCTTATCGTAAGTTAA 57.318 29.630 12.62 12.62 39.48 2.01
2852 6475 9.850628 ATTCGCATATTAGCTTATCGTAAGTTA 57.149 29.630 0.00 3.26 39.48 2.24
2853 6476 8.758633 ATTCGCATATTAGCTTATCGTAAGTT 57.241 30.769 0.00 4.00 39.48 2.66
2854 6477 8.758633 AATTCGCATATTAGCTTATCGTAAGT 57.241 30.769 0.00 0.00 39.48 2.24
2872 6495 9.453325 ACTTTCTTCGTTTATTTTTAATTCGCA 57.547 25.926 0.00 0.00 0.00 5.10
2883 6506 9.683069 TCTCGTACTTTACTTTCTTCGTTTATT 57.317 29.630 0.00 0.00 0.00 1.40
2884 6507 9.339492 CTCTCGTACTTTACTTTCTTCGTTTAT 57.661 33.333 0.00 0.00 0.00 1.40
2885 6508 8.345565 ACTCTCGTACTTTACTTTCTTCGTTTA 58.654 33.333 0.00 0.00 0.00 2.01
2886 6509 7.199078 ACTCTCGTACTTTACTTTCTTCGTTT 58.801 34.615 0.00 0.00 0.00 3.60
2887 6510 6.733145 ACTCTCGTACTTTACTTTCTTCGTT 58.267 36.000 0.00 0.00 0.00 3.85
2888 6511 6.311055 ACTCTCGTACTTTACTTTCTTCGT 57.689 37.500 0.00 0.00 0.00 3.85
2889 6512 8.014517 ACTTACTCTCGTACTTTACTTTCTTCG 58.985 37.037 0.00 0.00 0.00 3.79
2890 6513 9.676195 AACTTACTCTCGTACTTTACTTTCTTC 57.324 33.333 0.00 0.00 0.00 2.87
2891 6514 9.460906 CAACTTACTCTCGTACTTTACTTTCTT 57.539 33.333 0.00 0.00 0.00 2.52
2892 6515 7.594386 GCAACTTACTCTCGTACTTTACTTTCT 59.406 37.037 0.00 0.00 0.00 2.52
2893 6516 7.380602 TGCAACTTACTCTCGTACTTTACTTTC 59.619 37.037 0.00 0.00 0.00 2.62
2894 6517 7.205297 TGCAACTTACTCTCGTACTTTACTTT 58.795 34.615 0.00 0.00 0.00 2.66
2895 6518 6.742109 TGCAACTTACTCTCGTACTTTACTT 58.258 36.000 0.00 0.00 0.00 2.24
2896 6519 6.323203 TGCAACTTACTCTCGTACTTTACT 57.677 37.500 0.00 0.00 0.00 2.24
2897 6520 6.998258 TTGCAACTTACTCTCGTACTTTAC 57.002 37.500 0.00 0.00 0.00 2.01
2898 6521 8.597662 AATTTGCAACTTACTCTCGTACTTTA 57.402 30.769 0.00 0.00 0.00 1.85
2899 6522 7.492352 AATTTGCAACTTACTCTCGTACTTT 57.508 32.000 0.00 0.00 0.00 2.66
2900 6523 7.012044 ACAAATTTGCAACTTACTCTCGTACTT 59.988 33.333 18.12 0.00 0.00 2.24
2901 6524 6.482308 ACAAATTTGCAACTTACTCTCGTACT 59.518 34.615 18.12 0.00 0.00 2.73
2902 6525 6.656003 ACAAATTTGCAACTTACTCTCGTAC 58.344 36.000 18.12 0.00 0.00 3.67
2903 6526 6.854496 ACAAATTTGCAACTTACTCTCGTA 57.146 33.333 18.12 0.00 0.00 3.43
2904 6527 5.751243 ACAAATTTGCAACTTACTCTCGT 57.249 34.783 18.12 0.00 0.00 4.18
2905 6528 6.077838 GGTACAAATTTGCAACTTACTCTCG 58.922 40.000 18.12 0.00 0.00 4.04
2906 6529 6.856426 GTGGTACAAATTTGCAACTTACTCTC 59.144 38.462 18.12 3.53 44.16 3.20
2907 6530 6.320164 TGTGGTACAAATTTGCAACTTACTCT 59.680 34.615 18.12 0.00 44.16 3.24
2908 6531 6.500041 TGTGGTACAAATTTGCAACTTACTC 58.500 36.000 18.12 9.99 44.16 2.59
2909 6532 6.458232 TGTGGTACAAATTTGCAACTTACT 57.542 33.333 18.12 0.00 44.16 2.24
2910 6533 7.527084 TTTGTGGTACAAATTTGCAACTTAC 57.473 32.000 18.12 16.92 42.55 2.34
2911 6534 7.201565 GCTTTTGTGGTACAAATTTGCAACTTA 60.202 33.333 18.12 7.61 46.17 2.24
2912 6535 6.403092 GCTTTTGTGGTACAAATTTGCAACTT 60.403 34.615 18.12 0.00 46.17 2.66
2913 6536 5.064579 GCTTTTGTGGTACAAATTTGCAACT 59.935 36.000 18.12 1.16 46.17 3.16
2914 6537 5.163814 TGCTTTTGTGGTACAAATTTGCAAC 60.164 36.000 18.12 15.36 46.17 4.17
2915 6538 4.937620 TGCTTTTGTGGTACAAATTTGCAA 59.062 33.333 18.12 10.54 46.17 4.08
2916 6539 4.507710 TGCTTTTGTGGTACAAATTTGCA 58.492 34.783 18.12 17.60 46.17 4.08
2917 6540 5.671742 ATGCTTTTGTGGTACAAATTTGC 57.328 34.783 18.12 11.97 46.17 3.68
2918 6541 8.274939 CACTAATGCTTTTGTGGTACAAATTTG 58.725 33.333 16.67 16.67 46.17 2.32
2919 6542 8.364129 CACTAATGCTTTTGTGGTACAAATTT 57.636 30.769 15.81 0.00 46.17 1.82
2920 6543 7.945033 CACTAATGCTTTTGTGGTACAAATT 57.055 32.000 15.81 2.99 46.17 1.82
2943 6566 3.285982 CACATGGTGTGCACGGCA 61.286 61.111 13.13 0.00 41.89 5.69
2951 6574 1.961793 ACGTTACTTGCACATGGTGT 58.038 45.000 0.00 0.00 35.75 4.16
2952 6575 3.063452 GGATACGTTACTTGCACATGGTG 59.937 47.826 0.00 0.00 36.51 4.17
2953 6576 3.267483 GGATACGTTACTTGCACATGGT 58.733 45.455 0.00 0.00 0.00 3.55
2954 6577 3.944422 GGATACGTTACTTGCACATGG 57.056 47.619 0.00 0.00 0.00 3.66
2969 6592 2.099592 TGAATACGTGGGTGTCGGATAC 59.900 50.000 0.00 0.00 31.22 2.24
2970 6593 2.099592 GTGAATACGTGGGTGTCGGATA 59.900 50.000 0.00 0.00 31.22 2.59
2971 6594 1.134907 GTGAATACGTGGGTGTCGGAT 60.135 52.381 0.00 0.00 32.92 4.18
2972 6595 0.244450 GTGAATACGTGGGTGTCGGA 59.756 55.000 0.00 0.00 0.00 4.55
2973 6596 1.074319 CGTGAATACGTGGGTGTCGG 61.074 60.000 0.00 0.00 44.99 4.79
2974 6597 2.355797 CGTGAATACGTGGGTGTCG 58.644 57.895 0.00 0.00 44.99 4.35
2984 6607 4.582459 GAATCTCAAAGCAGCGTGAATAC 58.418 43.478 3.72 0.00 0.00 1.89
2985 6608 3.306973 CGAATCTCAAAGCAGCGTGAATA 59.693 43.478 3.72 0.00 0.00 1.75
2986 6609 2.094894 CGAATCTCAAAGCAGCGTGAAT 59.905 45.455 3.72 0.00 0.00 2.57
2987 6610 1.460743 CGAATCTCAAAGCAGCGTGAA 59.539 47.619 3.72 0.00 0.00 3.18
2988 6611 1.070821 CGAATCTCAAAGCAGCGTGA 58.929 50.000 2.27 2.27 0.00 4.35
2989 6612 1.070821 TCGAATCTCAAAGCAGCGTG 58.929 50.000 0.00 0.00 0.00 5.34
2990 6613 2.015736 ATCGAATCTCAAAGCAGCGT 57.984 45.000 0.00 0.00 0.00 5.07
2991 6614 2.349580 TGAATCGAATCTCAAAGCAGCG 59.650 45.455 1.55 0.00 0.00 5.18
2992 6615 4.548991 ATGAATCGAATCTCAAAGCAGC 57.451 40.909 1.55 0.00 0.00 5.25
2993 6616 9.512435 AAAAATATGAATCGAATCTCAAAGCAG 57.488 29.630 1.55 0.00 0.00 4.24
2994 6617 9.507280 GAAAAATATGAATCGAATCTCAAAGCA 57.493 29.630 1.55 0.00 0.00 3.91
2995 6618 9.727627 AGAAAAATATGAATCGAATCTCAAAGC 57.272 29.630 1.55 0.00 0.00 3.51
2999 6622 8.131100 GCCAAGAAAAATATGAATCGAATCTCA 58.869 33.333 1.55 0.00 0.00 3.27
3000 6623 7.592903 GGCCAAGAAAAATATGAATCGAATCTC 59.407 37.037 0.00 0.00 0.00 2.75
3001 6624 7.286316 AGGCCAAGAAAAATATGAATCGAATCT 59.714 33.333 5.01 0.00 0.00 2.40
3002 6625 7.428826 AGGCCAAGAAAAATATGAATCGAATC 58.571 34.615 5.01 0.00 0.00 2.52
3003 6626 7.352079 AGGCCAAGAAAAATATGAATCGAAT 57.648 32.000 5.01 0.00 0.00 3.34
3004 6627 6.773976 AGGCCAAGAAAAATATGAATCGAA 57.226 33.333 5.01 0.00 0.00 3.71
3005 6628 6.152661 ACAAGGCCAAGAAAAATATGAATCGA 59.847 34.615 5.01 0.00 0.00 3.59
3006 6629 6.254157 CACAAGGCCAAGAAAAATATGAATCG 59.746 38.462 5.01 0.00 0.00 3.34
3007 6630 6.036408 GCACAAGGCCAAGAAAAATATGAATC 59.964 38.462 5.01 0.00 36.11 2.52
3008 6631 5.876460 GCACAAGGCCAAGAAAAATATGAAT 59.124 36.000 5.01 0.00 36.11 2.57
3009 6632 5.221601 TGCACAAGGCCAAGAAAAATATGAA 60.222 36.000 5.01 0.00 43.89 2.57
3010 6633 4.282957 TGCACAAGGCCAAGAAAAATATGA 59.717 37.500 5.01 0.00 43.89 2.15
3011 6634 4.567971 TGCACAAGGCCAAGAAAAATATG 58.432 39.130 5.01 0.00 43.89 1.78
3012 6635 4.888326 TGCACAAGGCCAAGAAAAATAT 57.112 36.364 5.01 0.00 43.89 1.28
3013 6636 4.888326 ATGCACAAGGCCAAGAAAAATA 57.112 36.364 5.01 0.00 43.89 1.40
3014 6637 3.775261 ATGCACAAGGCCAAGAAAAAT 57.225 38.095 5.01 0.00 43.89 1.82
3015 6638 4.888326 ATATGCACAAGGCCAAGAAAAA 57.112 36.364 5.01 0.00 43.89 1.94
3016 6639 4.040217 ACAATATGCACAAGGCCAAGAAAA 59.960 37.500 5.01 0.00 43.89 2.29
3017 6640 3.577848 ACAATATGCACAAGGCCAAGAAA 59.422 39.130 5.01 0.00 43.89 2.52
3018 6641 3.164268 ACAATATGCACAAGGCCAAGAA 58.836 40.909 5.01 0.00 43.89 2.52
3019 6642 2.806434 ACAATATGCACAAGGCCAAGA 58.194 42.857 5.01 0.00 43.89 3.02
3020 6643 4.924305 ATACAATATGCACAAGGCCAAG 57.076 40.909 5.01 0.00 43.89 3.61
3021 6644 5.421693 AGAAATACAATATGCACAAGGCCAA 59.578 36.000 5.01 0.00 43.89 4.52
3022 6645 4.955450 AGAAATACAATATGCACAAGGCCA 59.045 37.500 5.01 0.00 43.89 5.36
3023 6646 5.520376 AGAAATACAATATGCACAAGGCC 57.480 39.130 0.00 0.00 43.89 5.19
3024 6647 6.237915 GCAAAGAAATACAATATGCACAAGGC 60.238 38.462 0.00 0.00 45.13 4.35
3025 6648 6.812656 TGCAAAGAAATACAATATGCACAAGG 59.187 34.615 0.00 0.00 37.40 3.61
3026 6649 7.815398 TGCAAAGAAATACAATATGCACAAG 57.185 32.000 0.00 0.00 37.40 3.16
3027 6650 8.774890 AATGCAAAGAAATACAATATGCACAA 57.225 26.923 0.00 0.00 44.06 3.33
3028 6651 8.410030 GAATGCAAAGAAATACAATATGCACA 57.590 30.769 0.00 0.00 44.06 4.57



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.