Multiple sequence alignment - TraesCS2A01G433000
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS2A01G433000
chr2A
100.000
3101
0
0
1
3101
686216385
686213285
0.000000e+00
5727.0
1
TraesCS2A01G433000
chr2A
85.345
116
15
2
1876
1990
438300511
438300625
5.430000e-23
119.0
2
TraesCS2A01G433000
chr2D
90.901
2319
129
39
1
2288
543431144
543428877
0.000000e+00
3038.0
3
TraesCS2A01G433000
chr2D
85.039
635
38
24
2342
2955
543428775
543428177
7.400000e-166
593.0
4
TraesCS2A01G433000
chr2D
86.207
116
14
2
1876
1990
331179447
331179561
1.170000e-24
124.0
5
TraesCS2A01G433000
chr2B
89.593
2287
140
55
1
2256
648654824
648652605
0.000000e+00
2815.0
6
TraesCS2A01G433000
chr2B
82.626
754
59
39
2342
3067
648652448
648651739
4.420000e-168
601.0
7
TraesCS2A01G433000
chr2B
85.345
116
15
2
1876
1990
399708194
399708308
5.430000e-23
119.0
8
TraesCS2A01G433000
chr4A
84.965
286
34
3
1042
1327
494074879
494074603
6.550000e-72
281.0
9
TraesCS2A01G433000
chr5D
78.894
199
21
13
1059
1257
70521545
70521368
7.030000e-22
115.0
10
TraesCS2A01G433000
chr5D
84.685
111
15
2
1881
1990
70520861
70520752
3.270000e-20
110.0
11
TraesCS2A01G433000
chr5B
88.298
94
11
0
1164
1257
75811736
75811643
2.530000e-21
113.0
12
TraesCS2A01G433000
chr5A
88.298
94
11
0
1164
1257
60414197
60414104
2.530000e-21
113.0
13
TraesCS2A01G433000
chr5A
84.685
111
15
2
1881
1990
60413600
60413491
3.270000e-20
110.0
14
TraesCS2A01G433000
chr3B
88.406
69
8
0
1700
1768
525242675
525242607
1.980000e-12
84.2
15
TraesCS2A01G433000
chr3B
90.566
53
3
2
1716
1767
507286712
507286763
5.550000e-08
69.4
16
TraesCS2A01G433000
chr3D
86.957
69
9
0
1700
1768
399380675
399380607
9.220000e-11
78.7
17
TraesCS2A01G433000
chr3A
86.957
69
9
0
1700
1768
518642918
518642850
9.220000e-11
78.7
18
TraesCS2A01G433000
chr3A
90.566
53
3
2
1716
1767
510664003
510664054
5.550000e-08
69.4
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS2A01G433000
chr2A
686213285
686216385
3100
True
5727.0
5727
100.0000
1
3101
1
chr2A.!!$R1
3100
1
TraesCS2A01G433000
chr2D
543428177
543431144
2967
True
1815.5
3038
87.9700
1
2955
2
chr2D.!!$R1
2954
2
TraesCS2A01G433000
chr2B
648651739
648654824
3085
True
1708.0
2815
86.1095
1
3067
2
chr2B.!!$R1
3066
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
117
118
0.251209
GGAGGTGGTGGGAAAGTTCC
60.251
60.0
1.1
1.1
46.82
3.62
F
552
567
0.615331
ACTATGCCTCACACCCACAG
59.385
55.0
0.0
0.0
0.00
3.66
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1771
1830
0.179045
AATCAATCGGCGAGGGAAGG
60.179
55.0
17.22
0.82
0.0
3.46
R
2336
2396
0.179174
GATCCGCGGCGTTGATTTTT
60.179
50.0
23.51
0.00
0.0
1.94
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
91
92
1.069500
CGTCAACGGGCTAAACAAAGG
60.069
52.381
0.00
0.00
35.37
3.11
94
95
1.539827
CAACGGGCTAAACAAAGGGAG
59.460
52.381
0.00
0.00
0.00
4.30
117
118
0.251209
GGAGGTGGTGGGAAAGTTCC
60.251
60.000
1.10
1.10
46.82
3.62
241
244
3.073062
TGCTAGGGAGAGGAAATAATGGC
59.927
47.826
0.00
0.00
0.00
4.40
268
272
7.489574
TTTTTATCATGGCCAACTTTGTTTC
57.510
32.000
10.96
0.00
0.00
2.78
306
310
2.079158
CACGCATCATTATAGCCAGGG
58.921
52.381
0.00
0.00
0.00
4.45
363
372
1.550524
AGACACAGGACACATACGCAT
59.449
47.619
0.00
0.00
0.00
4.73
364
373
2.758423
AGACACAGGACACATACGCATA
59.242
45.455
0.00
0.00
0.00
3.14
365
374
2.858344
GACACAGGACACATACGCATAC
59.142
50.000
0.00
0.00
0.00
2.39
506
518
1.032014
ATTATCACACCGCATTGGGC
58.968
50.000
0.00
0.00
44.64
5.36
527
541
1.000843
CTTTTTCCAAAGAAGCCCCCG
59.999
52.381
0.00
0.00
41.97
5.73
528
542
1.468506
TTTTCCAAAGAAGCCCCCGC
61.469
55.000
0.00
0.00
32.35
6.13
530
544
3.064324
CCAAAGAAGCCCCCGCAG
61.064
66.667
0.00
0.00
37.52
5.18
533
547
2.602676
AAAGAAGCCCCCGCAGCTA
61.603
57.895
0.00
0.00
40.49
3.32
552
567
0.615331
ACTATGCCTCACACCCACAG
59.385
55.000
0.00
0.00
0.00
3.66
557
572
1.843376
CCTCACACCCACAGGTCCT
60.843
63.158
0.00
0.00
46.45
3.85
559
574
0.833834
CTCACACCCACAGGTCCTCT
60.834
60.000
0.00
0.00
46.45
3.69
560
575
1.121407
TCACACCCACAGGTCCTCTG
61.121
60.000
0.00
0.00
46.45
3.35
575
590
4.753610
GGTCCTCTGTAACAGTAAACAACC
59.246
45.833
0.00
0.00
32.61
3.77
591
624
3.476552
ACAACCAATCACTGTACACTGG
58.523
45.455
0.00
0.00
0.00
4.00
607
640
9.289303
CTGTACACTGGCATAAATATTGAAAAC
57.711
33.333
0.00
0.00
0.00
2.43
653
686
9.546428
TCAATCACATGGAGTAGTTATATGTTG
57.454
33.333
0.00
0.00
30.15
3.33
656
689
9.982651
ATCACATGGAGTAGTTATATGTTGTAC
57.017
33.333
0.00
0.00
30.15
2.90
676
714
1.694639
GTACGACCTTCAGTTCGGTG
58.305
55.000
0.00
0.00
32.62
4.94
714
752
4.060038
ACAGTGTGAAACTAGACTGGTG
57.940
45.455
10.68
0.00
43.88
4.17
743
789
1.737793
CAAACAGTGGGATTAGACCGC
59.262
52.381
0.00
0.00
38.78
5.68
773
823
5.841957
AAAAATGTGAAGCTGACACTTCT
57.158
34.783
19.93
3.87
45.20
2.85
774
824
5.429957
AAAATGTGAAGCTGACACTTCTC
57.570
39.130
19.93
12.47
45.20
2.87
802
852
4.035843
CGGAGGGCCTACAACTCT
57.964
61.111
17.87
0.00
0.00
3.24
827
877
3.825623
GGGGAATCCAGGGGGCTG
61.826
72.222
0.09
0.00
35.00
4.85
829
879
4.883354
GGAATCCAGGGGGCTGCG
62.883
72.222
0.00
0.00
0.00
5.18
892
942
3.524380
TCACCCCGTTTCCACCTATAAAT
59.476
43.478
0.00
0.00
0.00
1.40
893
943
3.881089
CACCCCGTTTCCACCTATAAATC
59.119
47.826
0.00
0.00
0.00
2.17
948
998
3.041940
AAACCGAGAGCGCAACCG
61.042
61.111
11.47
9.38
35.83
4.44
1449
1508
1.003839
GCCGAACCTGACCATGTCA
60.004
57.895
0.00
0.00
40.50
3.58
1771
1830
2.239402
TCCCCTTACCCACGGTAAATTC
59.761
50.000
4.89
0.00
45.92
2.17
1775
1834
3.943381
CCTTACCCACGGTAAATTCCTTC
59.057
47.826
4.89
0.00
45.92
3.46
1780
1839
2.277084
CACGGTAAATTCCTTCCCTCG
58.723
52.381
0.00
0.00
0.00
4.63
1786
1845
0.546598
AATTCCTTCCCTCGCCGATT
59.453
50.000
0.00
0.00
0.00
3.34
1787
1846
0.179045
ATTCCTTCCCTCGCCGATTG
60.179
55.000
0.00
0.00
0.00
2.67
1789
1848
1.048724
TCCTTCCCTCGCCGATTGAT
61.049
55.000
0.00
0.00
0.00
2.57
1793
1852
0.539518
TCCCTCGCCGATTGATTCAA
59.460
50.000
0.75
0.75
0.00
2.69
1794
1853
0.657840
CCCTCGCCGATTGATTCAAC
59.342
55.000
0.15
0.00
0.00
3.18
1797
1856
1.062587
CTCGCCGATTGATTCAACACC
59.937
52.381
0.15
0.00
0.00
4.16
1798
1857
0.801872
CGCCGATTGATTCAACACCA
59.198
50.000
0.15
0.00
0.00
4.17
1800
1859
2.595386
GCCGATTGATTCAACACCAAC
58.405
47.619
0.15
0.00
0.00
3.77
1801
1860
2.030363
GCCGATTGATTCAACACCAACA
60.030
45.455
0.15
0.00
0.00
3.33
1802
1861
3.551863
GCCGATTGATTCAACACCAACAA
60.552
43.478
0.15
0.00
0.00
2.83
1803
1862
4.808558
CCGATTGATTCAACACCAACAAT
58.191
39.130
0.15
0.00
0.00
2.71
1804
1863
5.621104
GCCGATTGATTCAACACCAACAATA
60.621
40.000
0.15
0.00
0.00
1.90
1805
1864
5.799936
CCGATTGATTCAACACCAACAATAC
59.200
40.000
0.15
0.00
0.00
1.89
1806
1865
5.507876
CGATTGATTCAACACCAACAATACG
59.492
40.000
0.15
0.00
0.00
3.06
1829
1888
4.710528
AACAAGATTTCGACGAACTGTC
57.289
40.909
10.38
8.98
44.53
3.51
1855
1914
0.036105
ATGCGTGCAAGGATCTGACA
60.036
50.000
0.00
0.00
0.00
3.58
1867
1926
4.267536
AGGATCTGACATGGTTTGATGTG
58.732
43.478
0.00
0.00
36.67
3.21
1968
2027
3.490759
GCGATGCTGGTGGTGACG
61.491
66.667
0.00
0.00
0.00
4.35
2136
2195
5.966853
TTTCTTTCTTTCCCCATTTGGTT
57.033
34.783
0.00
0.00
0.00
3.67
2144
2204
3.067985
CCATTTGGTTGGGGGTGC
58.932
61.111
0.00
0.00
32.80
5.01
2145
2205
1.536174
CCATTTGGTTGGGGGTGCT
60.536
57.895
0.00
0.00
32.80
4.40
2146
2206
1.126948
CCATTTGGTTGGGGGTGCTT
61.127
55.000
0.00
0.00
32.80
3.91
2147
2207
0.321346
CATTTGGTTGGGGGTGCTTC
59.679
55.000
0.00
0.00
0.00
3.86
2148
2208
1.184970
ATTTGGTTGGGGGTGCTTCG
61.185
55.000
0.00
0.00
0.00
3.79
2155
2215
2.322830
GGGGGTGCTTCGTTCGTTC
61.323
63.158
0.00
0.00
0.00
3.95
2157
2217
2.170273
GGTGCTTCGTTCGTTCGC
59.830
61.111
0.00
0.00
0.00
4.70
2267
2327
0.674534
AGACTCCACTTCGTCCACAC
59.325
55.000
0.00
0.00
0.00
3.82
2268
2328
0.387929
GACTCCACTTCGTCCACACA
59.612
55.000
0.00
0.00
0.00
3.72
2269
2329
0.389391
ACTCCACTTCGTCCACACAG
59.611
55.000
0.00
0.00
0.00
3.66
2270
2330
0.389391
CTCCACTTCGTCCACACAGT
59.611
55.000
0.00
0.00
0.00
3.55
2271
2331
0.104120
TCCACTTCGTCCACACAGTG
59.896
55.000
0.00
0.00
37.07
3.66
2272
2332
1.498865
CCACTTCGTCCACACAGTGC
61.499
60.000
0.00
0.00
36.16
4.40
2291
2351
4.915085
AGTGCCATTTTTATTTGTTCGTCG
59.085
37.500
0.00
0.00
0.00
5.12
2292
2352
4.677832
GTGCCATTTTTATTTGTTCGTCGT
59.322
37.500
0.00
0.00
0.00
4.34
2293
2353
4.677378
TGCCATTTTTATTTGTTCGTCGTG
59.323
37.500
0.00
0.00
0.00
4.35
2298
2358
5.670149
TTTTATTTGTTCGTCGTGCCTAA
57.330
34.783
0.00
0.00
0.00
2.69
2303
2363
1.210870
GTTCGTCGTGCCTAACAACA
58.789
50.000
0.00
0.00
0.00
3.33
2304
2364
1.593933
GTTCGTCGTGCCTAACAACAA
59.406
47.619
0.00
0.00
0.00
2.83
2307
2367
1.191647
CGTCGTGCCTAACAACAACTC
59.808
52.381
0.00
0.00
0.00
3.01
2308
2368
1.191647
GTCGTGCCTAACAACAACTCG
59.808
52.381
0.00
0.00
0.00
4.18
2309
2369
1.202440
TCGTGCCTAACAACAACTCGT
60.202
47.619
0.00
0.00
0.00
4.18
2310
2370
1.070843
CGTGCCTAACAACAACTCGTG
60.071
52.381
0.00
0.00
0.00
4.35
2312
2372
0.237498
GCCTAACAACAACTCGTGCC
59.763
55.000
0.00
0.00
0.00
5.01
2313
2373
1.588674
CCTAACAACAACTCGTGCCA
58.411
50.000
0.00
0.00
0.00
4.92
2314
2374
2.151202
CCTAACAACAACTCGTGCCAT
58.849
47.619
0.00
0.00
0.00
4.40
2315
2375
2.552315
CCTAACAACAACTCGTGCCATT
59.448
45.455
0.00
0.00
0.00
3.16
2317
2377
0.951558
ACAACAACTCGTGCCATTCC
59.048
50.000
0.00
0.00
0.00
3.01
2318
2378
0.950836
CAACAACTCGTGCCATTCCA
59.049
50.000
0.00
0.00
0.00
3.53
2319
2379
0.951558
AACAACTCGTGCCATTCCAC
59.048
50.000
0.00
0.00
0.00
4.02
2331
2391
6.720012
GTGCCATTCCACGAAAATAAAATT
57.280
33.333
0.00
0.00
0.00
1.82
2333
2393
8.245701
GTGCCATTCCACGAAAATAAAATTAA
57.754
30.769
0.00
0.00
0.00
1.40
2334
2394
8.713271
GTGCCATTCCACGAAAATAAAATTAAA
58.287
29.630
0.00
0.00
0.00
1.52
2335
2395
9.273016
TGCCATTCCACGAAAATAAAATTAAAA
57.727
25.926
0.00
0.00
0.00
1.52
2369
2521
2.125106
GATCTGGGTGGGCGTGAC
60.125
66.667
0.00
0.00
0.00
3.67
2407
2564
2.601763
CGCGGTGACAGTTAATAAGGAC
59.398
50.000
0.00
0.00
0.00
3.85
2408
2565
2.601763
GCGGTGACAGTTAATAAGGACG
59.398
50.000
0.00
0.00
0.00
4.79
2409
2566
3.184541
CGGTGACAGTTAATAAGGACGG
58.815
50.000
0.00
0.00
0.00
4.79
2410
2567
3.119388
CGGTGACAGTTAATAAGGACGGA
60.119
47.826
0.00
0.00
0.00
4.69
2411
2568
4.179298
GGTGACAGTTAATAAGGACGGAC
58.821
47.826
0.00
0.00
0.00
4.79
2412
2569
4.179298
GTGACAGTTAATAAGGACGGACC
58.821
47.826
0.00
0.00
39.35
4.46
2413
2570
3.119388
TGACAGTTAATAAGGACGGACCG
60.119
47.826
13.61
13.61
44.74
4.79
2414
2571
2.167075
ACAGTTAATAAGGACGGACCGG
59.833
50.000
20.00
0.00
44.74
5.28
2444
2613
2.617021
GCCCCGACTTTGACCTCATAAA
60.617
50.000
0.00
0.00
0.00
1.40
2446
2615
3.007635
CCCGACTTTGACCTCATAAACC
58.992
50.000
0.00
0.00
0.00
3.27
2473
2642
3.129813
TGATTGCTACTGGTACTGGTACG
59.870
47.826
5.04
0.00
36.94
3.67
2474
2643
2.495155
TGCTACTGGTACTGGTACGA
57.505
50.000
5.04
0.88
36.94
3.43
2497
2666
2.346803
ACAATACAGTGCGCCAACTAG
58.653
47.619
4.18
0.52
0.00
2.57
2498
2667
1.665679
CAATACAGTGCGCCAACTAGG
59.334
52.381
4.18
0.00
41.84
3.02
2499
2668
1.191535
ATACAGTGCGCCAACTAGGA
58.808
50.000
4.18
0.00
41.22
2.94
2500
2669
0.530744
TACAGTGCGCCAACTAGGAG
59.469
55.000
4.18
0.00
41.22
3.69
2501
2670
1.293498
CAGTGCGCCAACTAGGAGT
59.707
57.895
4.18
0.00
41.22
3.85
2502
2671
0.530744
CAGTGCGCCAACTAGGAGTA
59.469
55.000
4.18
0.00
41.22
2.59
2503
2672
1.137086
CAGTGCGCCAACTAGGAGTAT
59.863
52.381
4.18
0.00
41.22
2.12
2504
2673
2.361119
CAGTGCGCCAACTAGGAGTATA
59.639
50.000
4.18
0.00
41.22
1.47
2505
2674
3.005897
CAGTGCGCCAACTAGGAGTATAT
59.994
47.826
4.18
0.00
41.22
0.86
2506
2675
4.217767
CAGTGCGCCAACTAGGAGTATATA
59.782
45.833
4.18
0.00
41.22
0.86
2507
2676
5.017490
AGTGCGCCAACTAGGAGTATATAT
58.983
41.667
4.18
0.00
41.22
0.86
2508
2677
6.095021
CAGTGCGCCAACTAGGAGTATATATA
59.905
42.308
4.18
0.00
41.22
0.86
2509
2678
6.095160
AGTGCGCCAACTAGGAGTATATATAC
59.905
42.308
14.05
14.05
41.22
1.47
2510
2679
5.947566
TGCGCCAACTAGGAGTATATATACA
59.052
40.000
22.00
3.57
41.22
2.29
2511
2680
6.605995
TGCGCCAACTAGGAGTATATATACAT
59.394
38.462
22.00
11.55
41.22
2.29
2512
2681
7.123697
TGCGCCAACTAGGAGTATATATACATT
59.876
37.037
22.00
10.94
41.22
2.71
2513
2682
7.980099
GCGCCAACTAGGAGTATATATACATTT
59.020
37.037
22.00
10.65
41.22
2.32
2514
2683
9.871238
CGCCAACTAGGAGTATATATACATTTT
57.129
33.333
22.00
4.16
41.22
1.82
2680
2869
2.606795
CCGCACCGATTGATTTGTTTGT
60.607
45.455
0.00
0.00
0.00
2.83
2681
2870
2.404693
CGCACCGATTGATTTGTTTGTG
59.595
45.455
0.00
0.00
0.00
3.33
2682
2871
2.155539
GCACCGATTGATTTGTTTGTGC
59.844
45.455
0.00
0.00
40.69
4.57
2683
2872
2.730928
CACCGATTGATTTGTTTGTGCC
59.269
45.455
0.00
0.00
0.00
5.01
2687
2876
0.461548
TTGATTTGTTTGTGCCCGCA
59.538
45.000
0.00
0.00
0.00
5.69
2701
2890
6.208988
TGTGCCCGCAATTATTATTGTTTA
57.791
33.333
6.33
0.00
42.56
2.01
2704
2893
7.223582
TGTGCCCGCAATTATTATTGTTTATTG
59.776
33.333
6.33
0.00
42.56
1.90
2716
2905
8.900983
ATTATTGTTTATTGCTCTCTCTCTCC
57.099
34.615
0.00
0.00
0.00
3.71
2760
2959
3.721706
CTGGGTGAGGGGAGTGGC
61.722
72.222
0.00
0.00
0.00
5.01
2801
3000
3.056328
GTCAAAGGAGGCGGGTGC
61.056
66.667
0.00
0.00
41.71
5.01
2846
3045
1.227823
CAAGTTGACCGCACCCTCA
60.228
57.895
0.00
0.00
0.00
3.86
2903
3113
3.121030
GCGCCGTGCAGTGAGAAT
61.121
61.111
0.00
0.00
45.45
2.40
2904
3114
2.780643
CGCCGTGCAGTGAGAATG
59.219
61.111
0.00
0.00
0.00
2.67
2925
3135
3.377759
AGAGAGCGCGCAGGAAGT
61.378
61.111
35.10
11.72
0.00
3.01
2944
3161
1.192146
TGTTTCTCCTCCTCCCACCG
61.192
60.000
0.00
0.00
0.00
4.94
2955
3172
1.810755
CCTCCCACCGCTTTTACTTTC
59.189
52.381
0.00
0.00
0.00
2.62
2966
3191
6.183360
ACCGCTTTTACTTTCTCGTTGTTTAA
60.183
34.615
0.00
0.00
0.00
1.52
2967
3192
6.854381
CCGCTTTTACTTTCTCGTTGTTTAAT
59.146
34.615
0.00
0.00
0.00
1.40
2968
3193
8.011106
CCGCTTTTACTTTCTCGTTGTTTAATA
58.989
33.333
0.00
0.00
0.00
0.98
3063
3288
2.125512
CAAAGGAGGGGTCGCTCG
60.126
66.667
8.58
0.00
0.00
5.03
3070
3295
4.867599
GGGGTCGCTCGCCGTTAG
62.868
72.222
0.00
0.00
39.31
2.34
3072
3297
4.789075
GGTCGCTCGCCGTTAGCA
62.789
66.667
0.00
0.00
44.04
3.49
3073
3298
2.582498
GTCGCTCGCCGTTAGCAT
60.582
61.111
0.00
0.00
44.04
3.79
3074
3299
2.165301
GTCGCTCGCCGTTAGCATT
61.165
57.895
0.00
0.00
44.04
3.56
3075
3300
1.447140
TCGCTCGCCGTTAGCATTT
60.447
52.632
0.00
0.00
44.04
2.32
3076
3301
1.012234
CGCTCGCCGTTAGCATTTC
60.012
57.895
0.00
0.00
44.04
2.17
3077
3302
1.012234
GCTCGCCGTTAGCATTTCG
60.012
57.895
0.00
0.00
44.04
3.46
3078
3303
1.636340
CTCGCCGTTAGCATTTCGG
59.364
57.895
0.00
0.00
44.04
4.30
3079
3304
1.079681
TCGCCGTTAGCATTTCGGT
60.080
52.632
10.28
0.00
45.11
4.69
3080
3305
0.671163
TCGCCGTTAGCATTTCGGTT
60.671
50.000
10.28
0.00
45.11
4.44
3081
3306
0.167251
CGCCGTTAGCATTTCGGTTT
59.833
50.000
10.28
0.00
45.11
3.27
3082
3307
1.789054
CGCCGTTAGCATTTCGGTTTC
60.789
52.381
10.28
0.00
45.11
2.78
3083
3308
1.198178
GCCGTTAGCATTTCGGTTTCA
59.802
47.619
10.28
0.00
45.11
2.69
3084
3309
2.350964
GCCGTTAGCATTTCGGTTTCAA
60.351
45.455
10.28
0.00
45.11
2.69
3085
3310
3.231160
CCGTTAGCATTTCGGTTTCAAC
58.769
45.455
0.00
0.00
39.51
3.18
3086
3311
3.058501
CCGTTAGCATTTCGGTTTCAACT
60.059
43.478
0.00
0.00
39.51
3.16
3087
3312
4.148891
CGTTAGCATTTCGGTTTCAACTC
58.851
43.478
0.00
0.00
0.00
3.01
3088
3313
4.473199
GTTAGCATTTCGGTTTCAACTCC
58.527
43.478
0.00
0.00
0.00
3.85
3089
3314
2.863809
AGCATTTCGGTTTCAACTCCT
58.136
42.857
0.00
0.00
0.00
3.69
3090
3315
2.814336
AGCATTTCGGTTTCAACTCCTC
59.186
45.455
0.00
0.00
0.00
3.71
3091
3316
2.412847
GCATTTCGGTTTCAACTCCTCG
60.413
50.000
0.00
0.00
0.00
4.63
3092
3317
1.873698
TTTCGGTTTCAACTCCTCGG
58.126
50.000
0.00
0.00
0.00
4.63
3093
3318
0.754472
TTCGGTTTCAACTCCTCGGT
59.246
50.000
0.00
0.00
0.00
4.69
3094
3319
0.754472
TCGGTTTCAACTCCTCGGTT
59.246
50.000
0.00
0.00
0.00
4.44
3095
3320
1.139455
TCGGTTTCAACTCCTCGGTTT
59.861
47.619
0.00
0.00
0.00
3.27
3096
3321
1.263217
CGGTTTCAACTCCTCGGTTTG
59.737
52.381
0.00
0.00
0.00
2.93
3097
3322
1.001706
GGTTTCAACTCCTCGGTTTGC
60.002
52.381
0.00
0.00
0.00
3.68
3098
3323
1.947456
GTTTCAACTCCTCGGTTTGCT
59.053
47.619
0.00
0.00
0.00
3.91
3099
3324
1.878953
TTCAACTCCTCGGTTTGCTC
58.121
50.000
0.00
0.00
0.00
4.26
3100
3325
0.319555
TCAACTCCTCGGTTTGCTCG
60.320
55.000
0.00
0.00
0.00
5.03
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
9
10
3.287222
TCAGGGGCTCAATTATTTTCCG
58.713
45.455
0.00
0.00
0.00
4.30
91
92
3.775654
CCACCACCTCCGCTCTCC
61.776
72.222
0.00
0.00
0.00
3.71
94
95
2.804828
CTTTCCCACCACCTCCGCTC
62.805
65.000
0.00
0.00
0.00
5.03
190
191
9.190317
ACTATCTCCTTGCGATATGATATTGTA
57.810
33.333
1.89
0.00
0.00
2.41
204
205
2.547642
CCTAGCAGCACTATCTCCTTGC
60.548
54.545
0.00
0.00
36.45
4.01
208
210
1.892474
CTCCCTAGCAGCACTATCTCC
59.108
57.143
0.00
0.00
0.00
3.71
210
212
2.490718
CCTCTCCCTAGCAGCACTATCT
60.491
54.545
0.00
0.00
0.00
1.98
241
244
3.508744
AGTTGGCCATGATAAAAAGCG
57.491
42.857
6.09
0.00
0.00
4.68
268
272
2.278094
CGTGCGTTTCTATTCTACACCG
59.722
50.000
0.00
0.00
0.00
4.94
363
372
9.747898
GAGAGAGGGAGAGAAAATATCATAGTA
57.252
37.037
0.00
0.00
0.00
1.82
364
373
8.456124
AGAGAGAGGGAGAGAAAATATCATAGT
58.544
37.037
0.00
0.00
0.00
2.12
365
374
8.742777
CAGAGAGAGGGAGAGAAAATATCATAG
58.257
40.741
0.00
0.00
0.00
2.23
382
391
0.391395
CACAAGCAGGCAGAGAGAGG
60.391
60.000
0.00
0.00
0.00
3.69
468
480
2.133281
TGACATCTTCTTGGCCATGG
57.867
50.000
17.95
7.63
0.00
3.66
506
518
1.347707
GGGGGCTTCTTTGGAAAAAGG
59.652
52.381
0.00
0.00
0.00
3.11
527
541
1.576356
GTGTGAGGCATAGTAGCTGC
58.424
55.000
0.00
0.00
38.93
5.25
528
542
1.202580
GGGTGTGAGGCATAGTAGCTG
60.203
57.143
0.00
0.00
34.17
4.24
530
544
0.830648
TGGGTGTGAGGCATAGTAGC
59.169
55.000
0.00
0.00
0.00
3.58
533
547
0.615331
CTGTGGGTGTGAGGCATAGT
59.385
55.000
0.00
0.00
0.00
2.12
552
567
4.753610
GGTTGTTTACTGTTACAGAGGACC
59.246
45.833
20.07
12.75
35.18
4.46
557
572
7.011950
CAGTGATTGGTTGTTTACTGTTACAGA
59.988
37.037
20.07
0.00
35.18
3.41
559
574
6.600032
ACAGTGATTGGTTGTTTACTGTTACA
59.400
34.615
0.00
0.00
44.32
2.41
560
575
7.023197
ACAGTGATTGGTTGTTTACTGTTAC
57.977
36.000
0.00
0.00
44.32
2.50
575
590
5.878332
TTTATGCCAGTGTACAGTGATTG
57.122
39.130
28.57
14.97
33.67
2.67
618
651
9.028284
ACTACTCCATGTGATTGATTTGATTTT
57.972
29.630
0.00
0.00
0.00
1.82
619
652
8.585471
ACTACTCCATGTGATTGATTTGATTT
57.415
30.769
0.00
0.00
0.00
2.17
634
667
9.390795
GTACGTACAACATATAACTACTCCATG
57.609
37.037
20.67
0.00
0.00
3.66
637
670
7.794349
GTCGTACGTACAACATATAACTACTCC
59.206
40.741
24.50
0.00
0.00
3.85
648
681
3.254166
ACTGAAGGTCGTACGTACAACAT
59.746
43.478
24.50
12.42
0.00
2.71
649
682
2.618241
ACTGAAGGTCGTACGTACAACA
59.382
45.455
24.50
12.89
0.00
3.33
650
683
3.273919
ACTGAAGGTCGTACGTACAAC
57.726
47.619
24.50
16.99
0.00
3.32
651
684
3.606846
CGAACTGAAGGTCGTACGTACAA
60.607
47.826
24.50
4.05
0.00
2.41
653
686
2.499896
CGAACTGAAGGTCGTACGTAC
58.500
52.381
15.90
15.90
0.00
3.67
655
688
0.239347
CCGAACTGAAGGTCGTACGT
59.761
55.000
16.05
0.00
0.00
3.57
656
689
0.239347
ACCGAACTGAAGGTCGTACG
59.761
55.000
16.00
9.53
35.50
3.67
707
745
3.476552
TGTTTGGATCTGAACACCAGTC
58.523
45.455
9.40
0.00
43.38
3.51
772
822
0.250513
CCCTCCGGTCCTTCTTTGAG
59.749
60.000
0.00
0.00
0.00
3.02
773
823
1.838073
GCCCTCCGGTCCTTCTTTGA
61.838
60.000
0.00
0.00
0.00
2.69
774
824
1.377333
GCCCTCCGGTCCTTCTTTG
60.377
63.158
0.00
0.00
0.00
2.77
788
838
3.456277
CCAGAATTAGAGTTGTAGGCCCT
59.544
47.826
0.00
0.00
0.00
5.19
793
843
5.693769
TTCCCCCAGAATTAGAGTTGTAG
57.306
43.478
0.00
0.00
0.00
2.74
794
844
5.132144
GGATTCCCCCAGAATTAGAGTTGTA
59.868
44.000
0.00
0.00
45.52
2.41
796
846
4.079787
TGGATTCCCCCAGAATTAGAGTTG
60.080
45.833
0.00
0.00
45.52
3.16
798
848
3.747852
TGGATTCCCCCAGAATTAGAGT
58.252
45.455
0.00
0.00
45.52
3.24
829
879
0.454452
GATGGTGTTCGCTTTTCGGC
60.454
55.000
0.00
0.00
39.05
5.54
841
891
2.093288
AGATGCGAGTCAATGATGGTGT
60.093
45.455
0.00
0.00
0.00
4.16
893
943
4.864334
GACGGAGGCCATGGCTGG
62.864
72.222
34.70
22.45
46.17
4.85
948
998
1.522580
GATCTTGGCTCGCTGTCCC
60.523
63.158
0.00
0.00
0.00
4.46
949
999
0.809241
CAGATCTTGGCTCGCTGTCC
60.809
60.000
0.00
0.00
0.00
4.02
986
1036
4.386951
CCATGGTCGCCGGTGTGA
62.387
66.667
16.01
1.54
0.00
3.58
1101
1151
2.517402
CCGGAGAGGGAGGAGACG
60.517
72.222
0.00
0.00
35.97
4.18
1771
1830
0.179045
AATCAATCGGCGAGGGAAGG
60.179
55.000
17.22
0.82
0.00
3.46
1775
1834
0.657840
GTTGAATCAATCGGCGAGGG
59.342
55.000
17.22
10.11
0.00
4.30
1780
1839
2.030363
TGTTGGTGTTGAATCAATCGGC
60.030
45.455
0.00
0.00
0.00
5.54
1786
1845
6.183360
TGTTTCGTATTGTTGGTGTTGAATCA
60.183
34.615
0.00
0.00
0.00
2.57
1787
1846
6.202937
TGTTTCGTATTGTTGGTGTTGAATC
58.797
36.000
0.00
0.00
0.00
2.52
1789
1848
5.562506
TGTTTCGTATTGTTGGTGTTGAA
57.437
34.783
0.00
0.00
0.00
2.69
1793
1852
6.385649
AATCTTGTTTCGTATTGTTGGTGT
57.614
33.333
0.00
0.00
0.00
4.16
1794
1853
6.086241
CGAAATCTTGTTTCGTATTGTTGGTG
59.914
38.462
13.10
0.00
44.25
4.17
1806
1865
5.079397
ACAGTTCGTCGAAATCTTGTTTC
57.921
39.130
9.70
0.00
0.00
2.78
1826
1885
0.948141
TTGCACGCATCATGACGACA
60.948
50.000
12.18
7.25
0.00
4.35
1827
1886
0.247419
CTTGCACGCATCATGACGAC
60.247
55.000
12.18
5.03
0.00
4.34
1829
1888
1.061411
CCTTGCACGCATCATGACG
59.939
57.895
0.00
0.00
0.00
4.35
1839
1898
1.012086
CCATGTCAGATCCTTGCACG
58.988
55.000
0.00
0.00
0.00
5.34
1855
1914
3.303938
TGAAACCCACACATCAAACCAT
58.696
40.909
0.00
0.00
0.00
3.55
1867
1926
1.065636
GTAGTAGCCCCTGAAACCCAC
60.066
57.143
0.00
0.00
0.00
4.61
1968
2027
4.849329
CGGTGCTCGCCCTCGTAC
62.849
72.222
0.00
0.00
36.96
3.67
2029
2088
3.640000
CGGCATCGGAATCGGCAC
61.640
66.667
0.00
0.00
36.95
5.01
2034
2093
3.972227
CCCATCGGCATCGGAATC
58.028
61.111
0.00
0.00
36.95
2.52
2129
2188
1.184970
CGAAGCACCCCCAACCAAAT
61.185
55.000
0.00
0.00
0.00
2.32
2136
2195
2.999739
GAACGAACGAAGCACCCCCA
63.000
60.000
0.14
0.00
0.00
4.96
2142
2202
2.362047
CGAGCGAACGAACGAAGCA
61.362
57.895
9.67
0.00
35.09
3.91
2143
2203
2.386868
CGAGCGAACGAACGAAGC
59.613
61.111
9.67
3.57
35.09
3.86
2144
2204
1.872325
TTGCGAGCGAACGAACGAAG
61.872
55.000
14.32
2.24
35.09
3.79
2145
2205
1.279527
ATTGCGAGCGAACGAACGAA
61.280
50.000
14.32
4.49
35.09
3.85
2146
2206
1.670971
GATTGCGAGCGAACGAACGA
61.671
55.000
14.32
0.00
35.09
3.85
2147
2207
1.295220
GATTGCGAGCGAACGAACG
60.295
57.895
5.91
4.02
35.09
3.95
2148
2208
0.246912
CAGATTGCGAGCGAACGAAC
60.247
55.000
5.91
0.00
35.09
3.95
2155
2215
0.575859
CATCAGACAGATTGCGAGCG
59.424
55.000
0.00
0.00
33.72
5.03
2157
2217
2.200067
GGACATCAGACAGATTGCGAG
58.800
52.381
0.00
0.00
33.72
5.03
2243
2303
2.659800
ACGAAGTGGAGTCTGGAGG
58.340
57.895
0.00
0.00
42.51
4.30
2267
2327
5.164196
CGACGAACAAATAAAAATGGCACTG
60.164
40.000
0.00
0.00
0.00
3.66
2268
2328
4.915085
CGACGAACAAATAAAAATGGCACT
59.085
37.500
0.00
0.00
0.00
4.40
2269
2329
4.677832
ACGACGAACAAATAAAAATGGCAC
59.322
37.500
0.00
0.00
0.00
5.01
2270
2330
4.677378
CACGACGAACAAATAAAAATGGCA
59.323
37.500
0.00
0.00
0.00
4.92
2271
2331
4.432373
GCACGACGAACAAATAAAAATGGC
60.432
41.667
0.00
0.00
0.00
4.40
2272
2332
4.089351
GGCACGACGAACAAATAAAAATGG
59.911
41.667
0.00
0.00
0.00
3.16
2291
2351
1.333791
GCACGAGTTGTTGTTAGGCAC
60.334
52.381
0.00
0.00
0.00
5.01
2292
2352
0.941542
GCACGAGTTGTTGTTAGGCA
59.058
50.000
0.00
0.00
0.00
4.75
2293
2353
0.237498
GGCACGAGTTGTTGTTAGGC
59.763
55.000
0.00
0.00
0.00
3.93
2298
2358
0.951558
GGAATGGCACGAGTTGTTGT
59.048
50.000
0.00
0.00
0.00
3.32
2303
2363
1.369692
TCGTGGAATGGCACGAGTT
59.630
52.632
0.00
0.00
46.91
3.01
2304
2364
3.056458
TCGTGGAATGGCACGAGT
58.944
55.556
0.00
0.00
46.91
4.18
2307
2367
3.479505
TTATTTTCGTGGAATGGCACG
57.520
42.857
0.00
0.00
45.09
5.34
2308
2368
6.720012
AATTTTATTTTCGTGGAATGGCAC
57.280
33.333
0.00
0.00
0.00
5.01
2309
2369
8.833231
TTTAATTTTATTTTCGTGGAATGGCA
57.167
26.923
0.00
0.00
0.00
4.92
2336
2396
0.179174
GATCCGCGGCGTTGATTTTT
60.179
50.000
23.51
0.00
0.00
1.94
2337
2397
1.024579
AGATCCGCGGCGTTGATTTT
61.025
50.000
23.51
7.52
0.00
1.82
2338
2398
1.449601
AGATCCGCGGCGTTGATTT
60.450
52.632
23.51
9.95
0.00
2.17
2340
2400
2.586079
CAGATCCGCGGCGTTGAT
60.586
61.111
23.51
16.98
0.00
2.57
2369
2521
1.058748
CGCGTACATGGCAGTTTCG
59.941
57.895
0.00
0.00
0.00
3.46
2392
2549
3.442100
CGGTCCGTCCTTATTAACTGTC
58.558
50.000
2.08
0.00
0.00
3.51
2425
2594
3.007635
GGTTTATGAGGTCAAAGTCGGG
58.992
50.000
0.00
0.00
0.00
5.14
2444
2613
1.640670
ACCAGTAGCAATCAATGGGGT
59.359
47.619
0.00
0.00
35.26
4.95
2446
2615
3.879295
CAGTACCAGTAGCAATCAATGGG
59.121
47.826
0.00
0.00
35.26
4.00
2473
2642
2.004583
TGGCGCACTGTATTGTACTC
57.995
50.000
10.83
0.00
0.00
2.59
2474
2643
2.073816
GTTGGCGCACTGTATTGTACT
58.926
47.619
10.83
0.00
0.00
2.73
2512
2681
6.771573
TCCCGACTTTTCTATACCTCAAAAA
58.228
36.000
0.00
0.00
0.00
1.94
2513
2682
6.363167
TCCCGACTTTTCTATACCTCAAAA
57.637
37.500
0.00
0.00
0.00
2.44
2514
2683
5.105064
CCTCCCGACTTTTCTATACCTCAAA
60.105
44.000
0.00
0.00
0.00
2.69
2515
2684
4.404715
CCTCCCGACTTTTCTATACCTCAA
59.595
45.833
0.00
0.00
0.00
3.02
2516
2685
3.958798
CCTCCCGACTTTTCTATACCTCA
59.041
47.826
0.00
0.00
0.00
3.86
2517
2686
3.321396
CCCTCCCGACTTTTCTATACCTC
59.679
52.174
0.00
0.00
0.00
3.85
2518
2687
3.052338
TCCCTCCCGACTTTTCTATACCT
60.052
47.826
0.00
0.00
0.00
3.08
2519
2688
3.303049
TCCCTCCCGACTTTTCTATACC
58.697
50.000
0.00
0.00
0.00
2.73
2530
2714
1.346722
TGTTCTTTTCTCCCTCCCGAC
59.653
52.381
0.00
0.00
0.00
4.79
2572
2761
8.700722
TCAATTCAATTATTGCGCTTGTTTAT
57.299
26.923
9.73
0.00
35.86
1.40
2625
2814
2.284921
TCTGCACAGAGGGGGAGG
60.285
66.667
0.00
0.00
32.82
4.30
2680
2869
6.201806
GCAATAAACAATAATAATTGCGGGCA
59.798
34.615
2.94
0.00
45.41
5.36
2681
2870
6.589454
GCAATAAACAATAATAATTGCGGGC
58.411
36.000
2.94
0.00
45.41
6.13
2701
2890
1.412937
GGAGGGGAGAGAGAGAGCAAT
60.413
57.143
0.00
0.00
0.00
3.56
2704
2893
1.528309
CGGAGGGGAGAGAGAGAGC
60.528
68.421
0.00
0.00
0.00
4.09
2715
2904
3.077556
CCACAGAGGACGGAGGGG
61.078
72.222
0.00
0.00
41.22
4.79
2716
2905
3.077556
CCCACAGAGGACGGAGGG
61.078
72.222
0.00
0.00
41.22
4.30
2827
3026
2.594592
AGGGTGCGGTCAACTTGC
60.595
61.111
0.00
0.00
0.00
4.01
2828
3027
1.227823
TGAGGGTGCGGTCAACTTG
60.228
57.895
0.00
0.00
0.00
3.16
2829
3028
1.071471
CTGAGGGTGCGGTCAACTT
59.929
57.895
0.00
0.00
0.00
2.66
2886
3089
3.121030
ATTCTCACTGCACGGCGC
61.121
61.111
6.90
0.00
42.89
6.53
2888
3091
2.327343
TGCATTCTCACTGCACGGC
61.327
57.895
0.00
0.00
44.30
5.68
2925
3135
1.192146
CGGTGGGAGGAGGAGAAACA
61.192
60.000
0.00
0.00
0.00
2.83
2986
3211
8.674607
CCTTGCTTCCGTTTCTTTTACTATTAT
58.325
33.333
0.00
0.00
0.00
1.28
2987
3212
7.120138
CCCTTGCTTCCGTTTCTTTTACTATTA
59.880
37.037
0.00
0.00
0.00
0.98
2988
3213
6.072119
CCCTTGCTTCCGTTTCTTTTACTATT
60.072
38.462
0.00
0.00
0.00
1.73
2989
3214
5.414765
CCCTTGCTTCCGTTTCTTTTACTAT
59.585
40.000
0.00
0.00
0.00
2.12
2990
3215
4.758165
CCCTTGCTTCCGTTTCTTTTACTA
59.242
41.667
0.00
0.00
0.00
1.82
2991
3216
3.568430
CCCTTGCTTCCGTTTCTTTTACT
59.432
43.478
0.00
0.00
0.00
2.24
2992
3217
3.855895
GCCCTTGCTTCCGTTTCTTTTAC
60.856
47.826
0.00
0.00
33.53
2.01
2993
3218
2.295070
GCCCTTGCTTCCGTTTCTTTTA
59.705
45.455
0.00
0.00
33.53
1.52
2994
3219
1.068588
GCCCTTGCTTCCGTTTCTTTT
59.931
47.619
0.00
0.00
33.53
2.27
2995
3220
0.673985
GCCCTTGCTTCCGTTTCTTT
59.326
50.000
0.00
0.00
33.53
2.52
2996
3221
2.341452
GCCCTTGCTTCCGTTTCTT
58.659
52.632
0.00
0.00
33.53
2.52
2997
3222
4.081050
GCCCTTGCTTCCGTTTCT
57.919
55.556
0.00
0.00
33.53
2.52
3037
3262
4.766632
CCTCCTTTGGGCCCTGGC
62.767
72.222
25.70
0.00
41.06
4.85
3039
3264
4.066139
CCCCTCCTTTGGGCCCTG
62.066
72.222
25.70
13.11
45.78
4.45
3065
3290
4.141855
AGTTGAAACCGAAATGCTAACG
57.858
40.909
0.00
0.00
0.00
3.18
3066
3291
4.215613
AGGAGTTGAAACCGAAATGCTAAC
59.784
41.667
0.00
0.00
0.00
2.34
3067
3292
4.394729
AGGAGTTGAAACCGAAATGCTAA
58.605
39.130
0.00
0.00
0.00
3.09
3068
3293
4.000988
GAGGAGTTGAAACCGAAATGCTA
58.999
43.478
0.00
0.00
0.00
3.49
3069
3294
2.814336
GAGGAGTTGAAACCGAAATGCT
59.186
45.455
0.00
0.00
0.00
3.79
3070
3295
2.412847
CGAGGAGTTGAAACCGAAATGC
60.413
50.000
0.00
0.00
0.00
3.56
3071
3296
2.159627
CCGAGGAGTTGAAACCGAAATG
59.840
50.000
0.00
0.00
0.00
2.32
3072
3297
2.224450
ACCGAGGAGTTGAAACCGAAAT
60.224
45.455
0.00
0.00
0.00
2.17
3073
3298
1.139455
ACCGAGGAGTTGAAACCGAAA
59.861
47.619
0.00
0.00
0.00
3.46
3074
3299
0.754472
ACCGAGGAGTTGAAACCGAA
59.246
50.000
0.00
0.00
0.00
4.30
3075
3300
0.754472
AACCGAGGAGTTGAAACCGA
59.246
50.000
0.00
0.00
0.00
4.69
3076
3301
1.263217
CAAACCGAGGAGTTGAAACCG
59.737
52.381
0.00
0.00
0.00
4.44
3077
3302
1.001706
GCAAACCGAGGAGTTGAAACC
60.002
52.381
12.21
0.00
0.00
3.27
3078
3303
1.947456
AGCAAACCGAGGAGTTGAAAC
59.053
47.619
12.21
0.00
0.00
2.78
3079
3304
2.218603
GAGCAAACCGAGGAGTTGAAA
58.781
47.619
12.21
0.00
0.00
2.69
3080
3305
1.872237
CGAGCAAACCGAGGAGTTGAA
60.872
52.381
12.21
0.00
0.00
2.69
3081
3306
0.319555
CGAGCAAACCGAGGAGTTGA
60.320
55.000
12.21
0.00
0.00
3.18
3082
3307
2.153913
CGAGCAAACCGAGGAGTTG
58.846
57.895
0.00
1.27
0.00
3.16
3083
3308
4.675404
CGAGCAAACCGAGGAGTT
57.325
55.556
0.00
0.00
0.00
3.01
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.