Multiple sequence alignment - TraesCS2A01G430200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G430200 chr2A 100.000 4415 0 0 1 4415 683516907 683512493 0.000000e+00 8154.0
1 TraesCS2A01G430200 chr2D 87.472 1780 150 33 1783 3537 539879444 539877713 0.000000e+00 1984.0
2 TraesCS2A01G430200 chr2D 88.103 975 74 19 1 949 539881724 539880766 0.000000e+00 1120.0
3 TraesCS2A01G430200 chr2D 88.991 654 42 17 3556 4201 539877729 539877098 0.000000e+00 782.0
4 TraesCS2A01G430200 chr2D 76.667 1440 261 50 2030 3427 462708779 462710185 0.000000e+00 728.0
5 TraesCS2A01G430200 chr2D 89.862 434 29 8 952 1384 539880670 539880251 1.080000e-150 544.0
6 TraesCS2A01G430200 chr2D 83.217 143 15 4 1440 1580 539879972 539879837 6.000000e-24 122.0
7 TraesCS2A01G430200 chr2B 88.479 651 38 17 7 637 644151665 644151032 0.000000e+00 752.0
8 TraesCS2A01G430200 chr2B 76.519 1448 259 50 2029 3441 545252930 545251529 0.000000e+00 715.0
9 TraesCS2A01G430200 chr2B 100.000 29 0 0 734 762 644150982 644150954 2.000000e-03 54.7
10 TraesCS2A01G430200 chr5D 80.899 89 13 2 1011 1097 462023845 462023931 2.850000e-07 67.6
11 TraesCS2A01G430200 chr5B 80.899 89 13 2 1011 1097 568176652 568176738 2.850000e-07 67.6
12 TraesCS2A01G430200 chr5A 80.899 89 13 2 1011 1097 582100235 582100321 2.850000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G430200 chr2A 683512493 683516907 4414 True 8154.00 8154 100.0000 1 4415 1 chr2A.!!$R1 4414
1 TraesCS2A01G430200 chr2D 539877098 539881724 4626 True 910.40 1984 87.5290 1 4201 5 chr2D.!!$R1 4200
2 TraesCS2A01G430200 chr2D 462708779 462710185 1406 False 728.00 728 76.6670 2030 3427 1 chr2D.!!$F1 1397
3 TraesCS2A01G430200 chr2B 545251529 545252930 1401 True 715.00 715 76.5190 2029 3441 1 chr2B.!!$R1 1412
4 TraesCS2A01G430200 chr2B 644150954 644151665 711 True 403.35 752 94.2395 7 762 2 chr2B.!!$R2 755

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 728 0.464036 TTGACGGTCTCAGCTTGTGT 59.536 50.0 9.88 0.00 0.00 3.72 F
1269 1408 0.026027 GTCTAGTCCGTACGCGTCAG 59.974 60.0 18.63 11.42 36.15 3.51 F
1787 2191 0.034337 TCCAAGTGTCGTGTTAGGCC 59.966 55.0 0.00 0.00 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1961 2519 0.240945 GTAGTGCGCATTTTGGCAGT 59.759 50.0 15.91 0.00 44.49 4.40 R
2720 3297 0.170561 CTCTGTGCCAAGAAGCATGC 59.829 55.0 10.51 10.51 46.24 4.06 R
3433 4047 0.458669 CAGAAGCCCCATCACAATGC 59.541 55.0 0.00 0.00 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 111 1.554617 TCCCAGATGTCGCTGATGAAA 59.445 47.619 0.00 0.00 38.14 2.69
119 120 3.116300 GTCGCTGATGAAATCTTCGCTA 58.884 45.455 9.53 0.80 45.81 4.26
158 159 4.956085 TCAACGAGGAGAACAATCAGAAA 58.044 39.130 0.00 0.00 0.00 2.52
166 167 3.335579 AGAACAATCAGAAACTACGGGC 58.664 45.455 0.00 0.00 0.00 6.13
179 180 1.101635 TACGGGCCATCGAGACTGAG 61.102 60.000 4.39 0.00 0.00 3.35
232 234 4.315803 AGTCGGTGATACTTGGTTTTGAG 58.684 43.478 0.00 0.00 0.00 3.02
304 306 1.401905 CAAAAACTATGGAGGGCTCGC 59.598 52.381 0.00 0.00 0.00 5.03
312 314 3.077556 GAGGGCTCGCTCCTTCCA 61.078 66.667 2.88 0.00 34.21 3.53
327 329 1.532604 TTCCAGATCGTGTCGTGCCT 61.533 55.000 0.00 0.00 0.00 4.75
336 338 1.301401 TGTCGTGCCTGTAGGTTGC 60.301 57.895 0.00 0.00 37.57 4.17
361 367 3.290710 GAGTGTGAATTATGCCCCATGT 58.709 45.455 0.00 0.00 0.00 3.21
362 368 4.460263 GAGTGTGAATTATGCCCCATGTA 58.540 43.478 0.00 0.00 0.00 2.29
404 413 1.625616 CCGACGCTACGTTTGAATCT 58.374 50.000 0.00 0.00 41.37 2.40
440 450 7.174426 GGTACAACTGCTTAAGAGGTTTGTTAT 59.826 37.037 6.67 0.00 0.00 1.89
441 451 7.203255 ACAACTGCTTAAGAGGTTTGTTATC 57.797 36.000 6.67 0.00 0.00 1.75
445 455 4.700213 TGCTTAAGAGGTTTGTTATCAGCC 59.300 41.667 6.67 0.00 0.00 4.85
452 462 2.525368 GTTTGTTATCAGCCCCTGGTT 58.475 47.619 0.00 0.00 31.51 3.67
453 463 2.492088 GTTTGTTATCAGCCCCTGGTTC 59.508 50.000 0.00 0.00 31.51 3.62
470 495 2.417515 GGTTCTGTAGCCTTTCTCTCGG 60.418 54.545 0.00 0.00 0.00 4.63
503 528 6.592607 ACACAGTATGGTCGTGTATTTTTAGG 59.407 38.462 0.00 0.00 41.90 2.69
505 530 7.118680 CACAGTATGGTCGTGTATTTTTAGGTT 59.881 37.037 0.00 0.00 43.62 3.50
506 531 8.313292 ACAGTATGGTCGTGTATTTTTAGGTTA 58.687 33.333 0.00 0.00 43.62 2.85
507 532 8.814235 CAGTATGGTCGTGTATTTTTAGGTTAG 58.186 37.037 0.00 0.00 0.00 2.34
508 533 8.752187 AGTATGGTCGTGTATTTTTAGGTTAGA 58.248 33.333 0.00 0.00 0.00 2.10
581 606 8.652810 ATTAACGTGGTAGTATATGTTTGGTC 57.347 34.615 0.00 0.00 0.00 4.02
611 642 6.945218 TGCTGCCTTATTTGGTTCATTATTT 58.055 32.000 0.00 0.00 0.00 1.40
617 648 9.442033 GCCTTATTTGGTTCATTATTTACGTAC 57.558 33.333 0.00 0.00 0.00 3.67
628 661 1.999048 TTTACGTACCCATGCGACTG 58.001 50.000 0.00 0.00 37.38 3.51
640 673 2.383527 GCGACTGTTTCCGGCTGAG 61.384 63.158 0.00 0.00 0.00 3.35
684 717 3.482783 GCTGCTCGCTTGACGGTC 61.483 66.667 0.00 0.00 43.89 4.79
685 718 2.259818 CTGCTCGCTTGACGGTCT 59.740 61.111 9.88 0.00 43.89 3.85
695 728 0.464036 TTGACGGTCTCAGCTTGTGT 59.536 50.000 9.88 0.00 0.00 3.72
702 735 1.265365 GTCTCAGCTTGTGTTGCTTCC 59.735 52.381 0.00 0.00 38.92 3.46
776 819 4.244425 ACATGTACATGGACGATCTAGC 57.756 45.455 33.32 0.00 42.91 3.42
787 830 3.243907 GGACGATCTAGCTTGGCTGTTAT 60.244 47.826 0.00 0.00 40.10 1.89
788 831 3.722147 ACGATCTAGCTTGGCTGTTATG 58.278 45.455 0.00 0.00 40.10 1.90
789 832 3.384789 ACGATCTAGCTTGGCTGTTATGA 59.615 43.478 0.00 0.00 40.10 2.15
790 833 3.986572 CGATCTAGCTTGGCTGTTATGAG 59.013 47.826 0.00 0.00 40.10 2.90
791 834 4.261783 CGATCTAGCTTGGCTGTTATGAGA 60.262 45.833 0.00 0.00 40.10 3.27
792 835 4.662468 TCTAGCTTGGCTGTTATGAGAG 57.338 45.455 0.00 0.00 40.10 3.20
793 836 4.281657 TCTAGCTTGGCTGTTATGAGAGA 58.718 43.478 0.00 0.00 40.10 3.10
794 837 3.258971 AGCTTGGCTGTTATGAGAGAC 57.741 47.619 0.00 0.00 37.57 3.36
817 861 3.951563 TTTTGGCTGGCATATAGGACT 57.048 42.857 4.22 0.00 0.00 3.85
818 862 5.381184 TTTTTGGCTGGCATATAGGACTA 57.619 39.130 4.22 0.00 0.00 2.59
819 863 5.582950 TTTTGGCTGGCATATAGGACTAT 57.417 39.130 4.22 0.00 0.00 2.12
820 864 6.696042 TTTTGGCTGGCATATAGGACTATA 57.304 37.500 4.22 1.83 33.09 1.31
821 865 6.891306 TTTGGCTGGCATATAGGACTATAT 57.109 37.500 4.22 6.12 38.81 0.86
822 866 7.988249 TTTGGCTGGCATATAGGACTATATA 57.012 36.000 4.22 0.00 36.80 0.86
823 867 8.567198 TTTGGCTGGCATATAGGACTATATAT 57.433 34.615 4.22 0.00 36.80 0.86
847 891 1.302752 GAGATATGCATGCCCGCCA 60.303 57.895 16.68 0.00 0.00 5.69
861 905 0.669932 CCGCCAGAGATATCTGCAGC 60.670 60.000 10.74 9.81 36.46 5.25
873 917 7.226325 AGAGATATCTGCAGCATCTGTTTAAAC 59.774 37.037 26.16 11.54 33.43 2.01
874 918 6.825213 AGATATCTGCAGCATCTGTTTAAACA 59.175 34.615 22.55 19.53 37.37 2.83
888 932 5.136828 TGTTTAAACAGAGATTTGCAGGGA 58.863 37.500 17.01 0.00 34.30 4.20
965 1104 2.440599 GTGGACCCTTGCCATGGT 59.559 61.111 14.67 0.00 37.81 3.55
971 1110 2.703798 CCCTTGCCATGGTGAAGCG 61.704 63.158 14.67 4.88 0.00 4.68
1051 1190 1.607612 GACATCCACCACCGGGAAT 59.392 57.895 6.32 0.00 38.09 3.01
1089 1228 2.047274 TTCTGCAGCGCCACCTAC 60.047 61.111 9.47 0.00 0.00 3.18
1107 1246 1.656587 ACAATGGCAGACAGGTCCTA 58.343 50.000 0.00 0.00 0.00 2.94
1112 1251 1.342076 TGGCAGACAGGTCCTAGGTAG 60.342 57.143 9.08 0.00 0.00 3.18
1113 1252 0.747852 GCAGACAGGTCCTAGGTAGC 59.252 60.000 9.08 5.53 0.00 3.58
1114 1253 1.960471 GCAGACAGGTCCTAGGTAGCA 60.960 57.143 9.08 0.00 0.00 3.49
1115 1254 1.751924 CAGACAGGTCCTAGGTAGCAC 59.248 57.143 9.08 0.00 0.00 4.40
1116 1255 1.641714 AGACAGGTCCTAGGTAGCACT 59.358 52.381 9.08 0.33 0.00 4.40
1117 1256 1.751924 GACAGGTCCTAGGTAGCACTG 59.248 57.143 9.08 12.75 0.00 3.66
1145 1284 5.407502 TCTGCGATCTTGTTTATTTCTCGA 58.592 37.500 0.00 0.00 0.00 4.04
1147 1286 6.019559 TCTGCGATCTTGTTTATTTCTCGATG 60.020 38.462 0.00 0.00 0.00 3.84
1158 1297 2.299993 TTCTCGATGCGATGCTCTTT 57.700 45.000 0.00 0.00 34.61 2.52
1168 1307 2.854185 GCGATGCTCTTTAATTTGGTGC 59.146 45.455 0.00 0.00 0.00 5.01
1176 1315 4.954875 TCTTTAATTTGGTGCTGGTTTGG 58.045 39.130 0.00 0.00 0.00 3.28
1219 1358 1.244019 ATCGTTGCTGGGCTTTGGAC 61.244 55.000 0.00 0.00 0.00 4.02
1249 1388 7.492524 TCATCTAAATTCTTGCGAGTAGACAT 58.507 34.615 0.00 0.00 0.00 3.06
1269 1408 0.026027 GTCTAGTCCGTACGCGTCAG 59.974 60.000 18.63 11.42 36.15 3.51
1279 1418 2.825075 TACGCGTCAGGCCTCCAGTA 62.825 60.000 18.63 0.17 38.94 2.74
1336 1475 6.573617 ATGTTTCTGCTTTTGTTTTCTTCG 57.426 33.333 0.00 0.00 0.00 3.79
1337 1476 5.465935 TGTTTCTGCTTTTGTTTTCTTCGT 58.534 33.333 0.00 0.00 0.00 3.85
1338 1477 5.571357 TGTTTCTGCTTTTGTTTTCTTCGTC 59.429 36.000 0.00 0.00 0.00 4.20
1339 1478 4.955925 TCTGCTTTTGTTTTCTTCGTCA 57.044 36.364 0.00 0.00 0.00 4.35
1340 1479 4.908736 TCTGCTTTTGTTTTCTTCGTCAG 58.091 39.130 0.00 0.00 0.00 3.51
1345 1484 4.609691 TTTGTTTTCTTCGTCAGTGGAC 57.390 40.909 0.00 0.00 40.77 4.02
1353 1492 1.262417 TCGTCAGTGGACCATGCTAA 58.738 50.000 0.00 0.00 41.13 3.09
1359 1498 2.689983 CAGTGGACCATGCTAATTTCCC 59.310 50.000 0.00 0.00 0.00 3.97
1360 1499 2.582636 AGTGGACCATGCTAATTTCCCT 59.417 45.455 0.00 0.00 0.00 4.20
1377 1516 1.077265 CTGCCTTGGGTGGTCCATT 59.923 57.895 0.00 0.00 46.52 3.16
1378 1517 1.228831 TGCCTTGGGTGGTCCATTG 60.229 57.895 0.00 0.00 46.52 2.82
1379 1518 1.076549 GCCTTGGGTGGTCCATTGA 59.923 57.895 0.00 0.00 46.52 2.57
1380 1519 0.324645 GCCTTGGGTGGTCCATTGAT 60.325 55.000 0.00 0.00 46.52 2.57
1381 1520 1.477553 CCTTGGGTGGTCCATTGATG 58.522 55.000 0.00 0.00 46.52 3.07
1382 1521 1.272648 CCTTGGGTGGTCCATTGATGT 60.273 52.381 0.00 0.00 46.52 3.06
1384 1523 3.563261 CCTTGGGTGGTCCATTGATGTTA 60.563 47.826 0.00 0.00 46.52 2.41
1385 1524 4.280819 CTTGGGTGGTCCATTGATGTTAT 58.719 43.478 0.00 0.00 46.52 1.89
1386 1525 3.630168 TGGGTGGTCCATTGATGTTATG 58.370 45.455 0.00 0.00 41.46 1.90
1393 1740 6.992123 GTGGTCCATTGATGTTATGAGTGATA 59.008 38.462 0.00 0.00 0.00 2.15
1398 1745 9.716531 TCCATTGATGTTATGAGTGATAGAATC 57.283 33.333 0.00 0.00 0.00 2.52
1399 1746 9.498176 CCATTGATGTTATGAGTGATAGAATCA 57.502 33.333 0.00 0.00 36.84 2.57
1410 1757 6.107901 AGTGATAGAATCATAAGGCTCACC 57.892 41.667 0.00 0.00 42.04 4.02
1412 1759 5.931146 GTGATAGAATCATAAGGCTCACCTG 59.069 44.000 0.00 0.00 43.53 4.00
1424 1771 3.265791 GGCTCACCTGTTTGAGTAGATG 58.734 50.000 2.30 0.00 44.34 2.90
1425 1772 3.307059 GGCTCACCTGTTTGAGTAGATGT 60.307 47.826 2.30 0.00 44.34 3.06
1430 1777 3.265791 CCTGTTTGAGTAGATGTGGAGC 58.734 50.000 0.00 0.00 0.00 4.70
1433 1780 4.973168 TGTTTGAGTAGATGTGGAGCTTT 58.027 39.130 0.00 0.00 0.00 3.51
1434 1781 6.109156 TGTTTGAGTAGATGTGGAGCTTTA 57.891 37.500 0.00 0.00 0.00 1.85
1436 1783 7.168219 TGTTTGAGTAGATGTGGAGCTTTAAT 58.832 34.615 0.00 0.00 0.00 1.40
1437 1784 7.334421 TGTTTGAGTAGATGTGGAGCTTTAATC 59.666 37.037 0.00 0.00 0.00 1.75
1438 1785 6.798427 TGAGTAGATGTGGAGCTTTAATCT 57.202 37.500 0.00 0.00 0.00 2.40
1440 1787 7.044181 TGAGTAGATGTGGAGCTTTAATCTTG 58.956 38.462 7.25 0.00 0.00 3.02
1441 1788 6.352516 AGTAGATGTGGAGCTTTAATCTTGG 58.647 40.000 7.25 0.00 0.00 3.61
1442 1789 5.441718 AGATGTGGAGCTTTAATCTTGGA 57.558 39.130 0.00 0.00 0.00 3.53
1453 1816 9.727627 GAGCTTTAATCTTGGAATTGAATAGTG 57.272 33.333 0.00 0.00 0.00 2.74
1455 1818 7.166473 GCTTTAATCTTGGAATTGAATAGTGCG 59.834 37.037 0.00 0.00 0.00 5.34
1459 1822 6.363577 TCTTGGAATTGAATAGTGCGAATC 57.636 37.500 0.00 0.00 0.00 2.52
1462 1825 3.545633 GAATTGAATAGTGCGAATCGGC 58.454 45.455 4.35 0.00 0.00 5.54
1471 1834 0.601046 TGCGAATCGGCTGGATCATC 60.601 55.000 4.35 0.00 33.02 2.92
1482 1845 4.712476 GGCTGGATCATCTTCTGTGTTAT 58.288 43.478 0.00 0.00 0.00 1.89
1488 1851 7.512130 TGGATCATCTTCTGTGTTATATGCTT 58.488 34.615 0.00 0.00 0.00 3.91
1489 1852 7.994911 TGGATCATCTTCTGTGTTATATGCTTT 59.005 33.333 0.00 0.00 0.00 3.51
1490 1853 9.494271 GGATCATCTTCTGTGTTATATGCTTTA 57.506 33.333 0.00 0.00 0.00 1.85
1510 1873 9.723601 TGCTTTATTATCATCATGCACATAGTA 57.276 29.630 0.00 0.00 0.00 1.82
1514 1877 6.990341 TTATCATCATGCACATAGTATGGC 57.010 37.500 14.59 14.02 40.33 4.40
1516 1879 4.320870 TCATCATGCACATAGTATGGCTG 58.679 43.478 14.59 12.88 40.33 4.85
1517 1880 3.843893 TCATGCACATAGTATGGCTGT 57.156 42.857 14.59 5.90 40.33 4.40
1518 1881 4.953940 TCATGCACATAGTATGGCTGTA 57.046 40.909 14.59 4.77 40.33 2.74
1519 1882 5.488262 TCATGCACATAGTATGGCTGTAT 57.512 39.130 14.59 6.77 40.33 2.29
1520 1883 5.868454 TCATGCACATAGTATGGCTGTATT 58.132 37.500 14.59 0.00 40.33 1.89
1521 1884 5.702209 TCATGCACATAGTATGGCTGTATTG 59.298 40.000 14.59 3.13 40.33 1.90
1580 1945 9.956720 CATGAACAATTTATAATTCAGACCCTC 57.043 33.333 5.68 0.00 34.71 4.30
1582 1947 9.396022 TGAACAATTTATAATTCAGACCCTCTC 57.604 33.333 0.00 0.00 0.00 3.20
1612 2014 6.301607 CGTCGTCATTGATAAATCATCATTGC 59.698 38.462 0.00 0.00 43.26 3.56
1615 2017 6.566376 CGTCATTGATAAATCATCATTGCGGA 60.566 38.462 0.00 0.00 43.26 5.54
1627 2029 2.391724 ATTGCGGACCTTGGACACGT 62.392 55.000 0.00 0.00 0.00 4.49
1639 2041 4.319766 CCTTGGACACGTTGATCTTCTTTG 60.320 45.833 0.00 0.00 0.00 2.77
1643 2045 4.036380 GGACACGTTGATCTTCTTTGGTTT 59.964 41.667 0.00 0.00 0.00 3.27
1644 2046 4.920376 ACACGTTGATCTTCTTTGGTTTG 58.080 39.130 0.00 0.00 0.00 2.93
1657 2059 3.726291 TTGGTTTGTTCCTGCTAAAGC 57.274 42.857 0.00 0.00 42.50 3.51
1661 2063 2.884639 GTTTGTTCCTGCTAAAGCTCCA 59.115 45.455 3.26 0.00 42.66 3.86
1674 2076 5.163814 GCTAAAGCTCCACATGTGTCTTTAG 60.164 44.000 34.35 34.35 40.70 1.85
1677 2079 4.511527 AGCTCCACATGTGTCTTTAGATG 58.488 43.478 23.79 5.90 0.00 2.90
1679 2081 4.331168 GCTCCACATGTGTCTTTAGATGTC 59.669 45.833 23.79 2.91 32.86 3.06
1681 2083 4.532126 TCCACATGTGTCTTTAGATGTCCT 59.468 41.667 23.79 0.00 32.86 3.85
1682 2084 4.633126 CCACATGTGTCTTTAGATGTCCTG 59.367 45.833 23.79 0.00 32.86 3.86
1683 2085 5.482006 CACATGTGTCTTTAGATGTCCTGA 58.518 41.667 18.03 0.00 32.86 3.86
1684 2086 5.579904 CACATGTGTCTTTAGATGTCCTGAG 59.420 44.000 18.03 0.00 32.86 3.35
1685 2087 4.193826 TGTGTCTTTAGATGTCCTGAGC 57.806 45.455 0.00 0.00 0.00 4.26
1686 2088 3.578282 TGTGTCTTTAGATGTCCTGAGCA 59.422 43.478 0.00 0.00 0.00 4.26
1693 2096 7.010923 GTCTTTAGATGTCCTGAGCAAGTAATG 59.989 40.741 0.00 0.00 0.00 1.90
1700 2103 3.691118 TCCTGAGCAAGTAATGTGCATTC 59.309 43.478 0.18 0.00 44.74 2.67
1753 2157 9.893305 TTAAGCTTTTGTTTCTTAATAGTCAGC 57.107 29.630 3.20 0.00 30.12 4.26
1760 2164 6.228258 TGTTTCTTAATAGTCAGCGAACCTT 58.772 36.000 0.00 0.00 0.00 3.50
1770 2174 2.317530 AGCGAACCTTAAGCTGATCC 57.682 50.000 0.00 0.00 40.07 3.36
1772 2176 2.027192 AGCGAACCTTAAGCTGATCCAA 60.027 45.455 0.00 0.00 40.07 3.53
1773 2177 2.352960 GCGAACCTTAAGCTGATCCAAG 59.647 50.000 0.00 0.00 0.00 3.61
1775 2179 3.372206 CGAACCTTAAGCTGATCCAAGTG 59.628 47.826 0.00 0.00 0.00 3.16
1778 2182 2.932614 CCTTAAGCTGATCCAAGTGTCG 59.067 50.000 0.00 0.00 0.00 4.35
1780 2184 1.800805 AAGCTGATCCAAGTGTCGTG 58.199 50.000 0.00 0.00 0.00 4.35
1783 2187 2.299013 AGCTGATCCAAGTGTCGTGTTA 59.701 45.455 0.00 0.00 0.00 2.41
1784 2188 2.668457 GCTGATCCAAGTGTCGTGTTAG 59.332 50.000 0.00 0.00 0.00 2.34
1785 2189 3.254060 CTGATCCAAGTGTCGTGTTAGG 58.746 50.000 0.00 0.00 0.00 2.69
1786 2190 2.000447 GATCCAAGTGTCGTGTTAGGC 59.000 52.381 0.00 0.00 0.00 3.93
1787 2191 0.034337 TCCAAGTGTCGTGTTAGGCC 59.966 55.000 0.00 0.00 0.00 5.19
1792 2349 3.688694 AGTGTCGTGTTAGGCCATTTA 57.311 42.857 5.01 0.00 0.00 1.40
1798 2355 5.938710 TGTCGTGTTAGGCCATTTATGTTTA 59.061 36.000 5.01 0.00 0.00 2.01
1804 2361 8.520351 GTGTTAGGCCATTTATGTTTAACTCTT 58.480 33.333 5.01 0.00 0.00 2.85
1805 2362 8.519526 TGTTAGGCCATTTATGTTTAACTCTTG 58.480 33.333 5.01 0.00 0.00 3.02
1817 2374 7.445900 TGTTTAACTCTTGTAGATATTCGCG 57.554 36.000 0.00 0.00 0.00 5.87
1822 2379 3.317150 TCTTGTAGATATTCGCGGCATG 58.683 45.455 6.13 0.00 0.00 4.06
1823 2380 1.428448 TGTAGATATTCGCGGCATGC 58.572 50.000 9.90 9.90 41.47 4.06
1824 2381 0.721718 GTAGATATTCGCGGCATGCC 59.278 55.000 27.67 27.67 42.08 4.40
1834 2392 2.572812 GGCATGCCGTCATTGCAA 59.427 55.556 23.48 0.00 42.92 4.08
1842 2400 1.621107 CCGTCATTGCAATCTTGTGC 58.379 50.000 9.53 0.00 45.15 4.57
1849 2407 3.780925 GCAATCTTGTGCACAGGTC 57.219 52.632 26.05 11.83 44.29 3.85
1850 2408 0.242017 GCAATCTTGTGCACAGGTCC 59.758 55.000 26.05 10.93 44.29 4.46
1858 2416 4.941263 TCTTGTGCACAGGTCCATAAATAC 59.059 41.667 26.05 0.00 0.00 1.89
1864 2422 3.569701 CACAGGTCCATAAATACATGCCC 59.430 47.826 0.00 0.00 30.81 5.36
1887 2445 8.367156 GCCCTAAATAGCATTTTATCAAATGGA 58.633 33.333 12.97 0.00 46.63 3.41
1913 2471 8.270030 ACAAAATATCTCTGATGAACATCCTCA 58.730 33.333 11.51 0.00 37.02 3.86
1914 2472 9.117183 CAAAATATCTCTGATGAACATCCTCAA 57.883 33.333 11.51 0.00 37.02 3.02
1915 2473 8.905660 AAATATCTCTGATGAACATCCTCAAG 57.094 34.615 11.51 3.63 37.02 3.02
1917 2475 5.752036 TCTCTGATGAACATCCTCAAGTT 57.248 39.130 11.51 0.00 37.02 2.66
1918 2476 5.728471 TCTCTGATGAACATCCTCAAGTTC 58.272 41.667 11.51 0.00 43.31 3.01
1924 2482 4.780815 TGAACATCCTCAAGTTCAGTTGT 58.219 39.130 4.07 0.00 46.46 3.32
1925 2483 5.924356 TGAACATCCTCAAGTTCAGTTGTA 58.076 37.500 4.07 0.00 46.46 2.41
1926 2484 6.533730 TGAACATCCTCAAGTTCAGTTGTAT 58.466 36.000 4.07 0.00 46.46 2.29
1927 2485 7.676004 TGAACATCCTCAAGTTCAGTTGTATA 58.324 34.615 4.07 0.00 46.46 1.47
1928 2486 7.602644 TGAACATCCTCAAGTTCAGTTGTATAC 59.397 37.037 4.07 0.00 46.46 1.47
1932 2490 9.003658 CATCCTCAAGTTCAGTTGTATACTTTT 57.996 33.333 4.17 0.00 33.85 2.27
1933 2491 8.378172 TCCTCAAGTTCAGTTGTATACTTTTG 57.622 34.615 4.17 0.14 33.85 2.44
1938 2496 9.651718 CAAGTTCAGTTGTATACTTTTGAGTTC 57.348 33.333 4.17 1.52 33.85 3.01
1945 2503 9.391006 AGTTGTATACTTTTGAGTTCTGTTGAA 57.609 29.630 4.17 0.00 31.29 2.69
1968 2526 8.740906 TGAAATATAATTTTACCGAACTGCCAA 58.259 29.630 0.00 0.00 0.00 4.52
1972 2530 7.826260 ATAATTTTACCGAACTGCCAAAATG 57.174 32.000 0.00 0.00 31.17 2.32
1986 2544 1.655099 CAAAATGCGCACTACAATGCC 59.345 47.619 14.90 0.00 42.99 4.40
1992 2550 2.472909 GCACTACAATGCCCCGAGC 61.473 63.158 0.00 0.00 39.86 5.03
1993 2551 1.221840 CACTACAATGCCCCGAGCT 59.778 57.895 0.00 0.00 44.23 4.09
1994 2552 0.464036 CACTACAATGCCCCGAGCTA 59.536 55.000 0.00 0.00 44.23 3.32
1995 2553 0.753262 ACTACAATGCCCCGAGCTAG 59.247 55.000 0.00 0.00 44.23 3.42
1998 2556 1.596477 CAATGCCCCGAGCTAGCTC 60.596 63.158 31.12 31.12 44.23 4.09
2012 2570 5.047660 CGAGCTAGCTCCCAAAGATTATAGT 60.048 44.000 33.57 0.00 39.77 2.12
2014 2572 5.604650 AGCTAGCTCCCAAAGATTATAGTGT 59.395 40.000 12.68 0.00 0.00 3.55
2017 2575 8.097662 GCTAGCTCCCAAAGATTATAGTGTTAT 58.902 37.037 7.70 0.00 0.00 1.89
2064 2622 6.978659 TCGTGTATGAAGCTAAAGTATTGGAG 59.021 38.462 0.00 0.00 0.00 3.86
2092 2650 5.033589 AGAAGATGGCTTTATGACAGAGG 57.966 43.478 0.00 0.00 36.95 3.69
2110 2668 5.247110 ACAGAGGCTGAAATTTCTACTCAGA 59.753 40.000 25.10 6.20 39.15 3.27
2154 2712 1.271054 GCTGTCTGGAAGGAGCTCAAA 60.271 52.381 17.19 0.00 37.03 2.69
2162 2720 1.801178 GAAGGAGCTCAAACACCGAAG 59.199 52.381 17.19 0.00 0.00 3.79
2200 2758 1.587613 TTTTTGCTCGTTGCGCACC 60.588 52.632 11.12 0.16 46.63 5.01
2201 2759 2.945398 TTTTTGCTCGTTGCGCACCC 62.945 55.000 11.12 2.10 46.63 4.61
2267 2832 1.950472 CGTCAGTTCATTTTCGGTGC 58.050 50.000 0.00 0.00 0.00 5.01
2288 2853 6.128227 GGTGCGTTATAACAATGTTACCTCAA 60.128 38.462 15.67 0.00 0.00 3.02
2297 2865 6.045072 ACAATGTTACCTCAAGACCGATAA 57.955 37.500 0.00 0.00 0.00 1.75
2318 2886 1.254026 AGGCACTACAACGCTGTCTA 58.746 50.000 0.00 0.00 36.02 2.59
2325 2900 3.568853 ACTACAACGCTGTCTACTGAGTT 59.431 43.478 0.00 3.86 38.05 3.01
2354 2931 3.496507 TGTGTGGTACATTGAATGTGTCG 59.503 43.478 20.29 0.00 44.60 4.35
2356 2933 4.687018 GTGTGGTACATTGAATGTGTCGTA 59.313 41.667 20.29 0.00 44.60 3.43
2391 2968 2.016318 GTTCATCGGTGCATCAATGGA 58.984 47.619 0.00 0.00 0.00 3.41
2442 3019 2.433838 CGAGAGCAGTGCACCCAG 60.434 66.667 19.20 5.11 0.00 4.45
2443 3020 2.935740 CGAGAGCAGTGCACCCAGA 61.936 63.158 19.20 0.00 0.00 3.86
2474 3051 1.765314 AGAGAGCCTGTTGTGTTGTCT 59.235 47.619 0.00 0.00 0.00 3.41
2487 3064 9.208022 CTGTTGTGTTGTCTTTGAATATCTCTA 57.792 33.333 0.00 0.00 0.00 2.43
2505 3082 6.869315 TCTCTATTTAGGATCACTGAGACG 57.131 41.667 0.00 0.00 0.00 4.18
2507 3084 7.227873 TCTCTATTTAGGATCACTGAGACGAT 58.772 38.462 0.00 0.00 0.00 3.73
2526 3103 4.098654 ACGATATCTATATGCTCACAGGGC 59.901 45.833 0.34 0.00 0.00 5.19
2599 3176 1.141858 GGGTAAGCAAGCTGGCTAGAT 59.858 52.381 18.09 3.04 45.07 1.98
2601 3178 3.282885 GGTAAGCAAGCTGGCTAGATTT 58.717 45.455 18.09 2.16 45.07 2.17
2602 3179 3.065925 GGTAAGCAAGCTGGCTAGATTTG 59.934 47.826 18.09 5.84 45.07 2.32
2609 3186 1.673168 CTGGCTAGATTTGCTCCCAC 58.327 55.000 0.00 0.00 0.00 4.61
2623 3200 3.181440 TGCTCCCACATATCTTCCAATCC 60.181 47.826 0.00 0.00 0.00 3.01
2641 3218 1.961394 TCCGAATCCGAGGATAACCAG 59.039 52.381 4.89 0.00 38.94 4.00
2644 3221 2.484889 GAATCCGAGGATAACCAGCAC 58.515 52.381 4.89 0.00 38.94 4.40
2689 3266 5.184096 AGACTGAGCTATCTTCACTCGAAAA 59.816 40.000 0.00 0.00 32.98 2.29
2704 3281 3.449632 TCGAAAAATATCGTGCATCGGA 58.550 40.909 8.46 0.00 43.19 4.55
2720 3297 3.319137 TCGGAATGTCAAACCTGAGAG 57.681 47.619 0.00 0.00 30.14 3.20
2732 3309 1.339824 ACCTGAGAGCATGCTTCTTGG 60.340 52.381 23.61 22.11 0.00 3.61
2734 3311 0.037160 TGAGAGCATGCTTCTTGGCA 59.963 50.000 23.61 11.34 46.63 4.92
2741 3318 0.694771 ATGCTTCTTGGCACAGAGGA 59.305 50.000 11.14 1.13 45.36 3.71
2742 3319 0.035881 TGCTTCTTGGCACAGAGGAG 59.964 55.000 11.14 1.65 42.39 3.69
2812 3398 2.202797 CGGAGGACATGACAGGCG 60.203 66.667 0.00 0.00 0.00 5.52
2814 3400 2.265739 GAGGACATGACAGGCGCA 59.734 61.111 10.83 0.00 0.00 6.09
2832 3427 1.921346 ACTCGGTTACATGGCCCCA 60.921 57.895 0.00 0.00 0.00 4.96
2908 3512 5.292765 TGTGTTTCTTCACAACAAAAGCAA 58.707 33.333 0.00 0.00 43.92 3.91
2910 3514 6.090628 TGTGTTTCTTCACAACAAAAGCAATC 59.909 34.615 0.00 0.00 43.92 2.67
2921 3525 5.783100 ACAAAAGCAATCTGTTGTTGTTG 57.217 34.783 6.43 6.43 45.97 3.33
2929 3533 6.091169 AGCAATCTGTTGTTGTTGTTTTTCTG 59.909 34.615 0.00 0.00 37.65 3.02
2961 3565 1.819632 GGGCAAGCCATACGACAGG 60.820 63.158 13.87 0.00 37.98 4.00
2966 3570 2.271800 CAAGCCATACGACAGGAAGTC 58.728 52.381 0.00 0.00 44.02 3.01
2999 3603 2.034124 CTTTGGGATATGCTTGTGGGG 58.966 52.381 0.00 0.00 0.00 4.96
3042 3646 3.364465 CGTACTATCCAGACATGAGCTCG 60.364 52.174 9.64 0.00 0.00 5.03
3056 3660 2.480100 GCTCGGTAGAGGTCTCGTT 58.520 57.895 0.00 0.00 44.51 3.85
3096 3703 1.067142 TGTTTTCCGTCAGATCCCTCG 60.067 52.381 0.00 0.00 0.00 4.63
3099 3706 0.106868 TTCCGTCAGATCCCTCGCTA 60.107 55.000 0.00 0.00 0.00 4.26
3121 3728 9.268268 CGCTAAATATTACACCCAGAAGAATTA 57.732 33.333 0.00 0.00 0.00 1.40
3162 3771 5.385509 AAAACAAGCCTACGCAACAATAT 57.614 34.783 0.00 0.00 37.52 1.28
3191 3805 8.980143 TTGCTTATAGGTTTGCTTTTTATGTC 57.020 30.769 0.00 0.00 0.00 3.06
3213 3827 1.221414 GTGCATAGAATCTGCGACCC 58.779 55.000 0.00 0.00 42.62 4.46
3233 3847 4.479993 GATCCCACGCTGCTGCCT 62.480 66.667 10.24 0.00 35.36 4.75
3270 3884 3.394940 ACATCATGAAGAGATGCTGGGAT 59.605 43.478 4.68 0.00 45.19 3.85
3315 3929 1.951209 TGAAGGAGGTGGTGCATCTA 58.049 50.000 0.00 0.00 0.00 1.98
3342 3956 1.002087 GATCTTGACACGACCAAGGGT 59.998 52.381 13.16 0.00 40.88 4.34
3354 3968 1.456331 CAAGGGTGGGGGCATGATC 60.456 63.158 0.00 0.00 0.00 2.92
3428 4042 3.118261 GGTCCATAGATTTGTCTCCAGCA 60.118 47.826 0.00 0.00 0.00 4.41
3432 4046 1.446907 AGATTTGTCTCCAGCAAGCG 58.553 50.000 0.00 0.00 0.00 4.68
3433 4047 0.449388 GATTTGTCTCCAGCAAGCGG 59.551 55.000 0.00 0.00 0.00 5.52
3451 4065 0.685458 GGCATTGTGATGGGGCTTCT 60.685 55.000 0.00 0.00 33.72 2.85
3483 4097 4.202101 TGCCACTAGTTTTGAAATGTGTGG 60.202 41.667 12.32 12.32 44.43 4.17
3484 4098 4.202111 GCCACTAGTTTTGAAATGTGTGGT 60.202 41.667 15.67 0.00 43.76 4.16
3490 4104 4.020662 AGTTTTGAAATGTGTGGTGGTGTT 60.021 37.500 0.00 0.00 0.00 3.32
3502 4116 3.811497 GTGGTGGTGTTGTTTACTACTCC 59.189 47.826 8.09 8.09 36.35 3.85
3503 4117 3.455177 TGGTGGTGTTGTTTACTACTCCA 59.545 43.478 12.11 12.11 40.79 3.86
3506 4120 4.694037 GTGGTGTTGTTTACTACTCCATCC 59.306 45.833 16.89 6.17 43.22 3.51
3510 4124 5.119743 GTGTTGTTTACTACTCCATCCGTTC 59.880 44.000 0.00 0.00 0.00 3.95
3512 4126 3.119388 TGTTTACTACTCCATCCGTTCCG 60.119 47.826 0.00 0.00 0.00 4.30
3517 4131 2.024176 ACTCCATCCGTTCCGAAATG 57.976 50.000 0.00 0.00 0.00 2.32
3523 4137 1.600023 TCCGTTCCGAAATGCTTGTT 58.400 45.000 0.00 0.00 0.00 2.83
3524 4138 1.265635 TCCGTTCCGAAATGCTTGTTG 59.734 47.619 0.00 0.00 0.00 3.33
3525 4139 1.001815 CCGTTCCGAAATGCTTGTTGT 60.002 47.619 0.00 0.00 0.00 3.32
3526 4140 2.043411 CGTTCCGAAATGCTTGTTGTG 58.957 47.619 0.00 0.00 0.00 3.33
3527 4141 2.393764 GTTCCGAAATGCTTGTTGTGG 58.606 47.619 0.00 0.00 0.00 4.17
3528 4142 1.686355 TCCGAAATGCTTGTTGTGGT 58.314 45.000 0.00 0.00 0.00 4.16
3529 4143 2.028130 TCCGAAATGCTTGTTGTGGTT 58.972 42.857 0.00 0.00 0.00 3.67
3530 4144 2.428890 TCCGAAATGCTTGTTGTGGTTT 59.571 40.909 0.00 0.00 0.00 3.27
3531 4145 3.118956 TCCGAAATGCTTGTTGTGGTTTT 60.119 39.130 0.00 0.00 0.00 2.43
3532 4146 4.098044 TCCGAAATGCTTGTTGTGGTTTTA 59.902 37.500 0.00 0.00 0.00 1.52
3533 4147 4.444056 CCGAAATGCTTGTTGTGGTTTTAG 59.556 41.667 0.00 0.00 0.00 1.85
3534 4148 5.040635 CGAAATGCTTGTTGTGGTTTTAGT 58.959 37.500 0.00 0.00 0.00 2.24
3535 4149 5.518487 CGAAATGCTTGTTGTGGTTTTAGTT 59.482 36.000 0.00 0.00 0.00 2.24
3536 4150 6.035542 CGAAATGCTTGTTGTGGTTTTAGTTT 59.964 34.615 0.00 0.00 0.00 2.66
3537 4151 7.412455 CGAAATGCTTGTTGTGGTTTTAGTTTT 60.412 33.333 0.00 0.00 0.00 2.43
3538 4152 7.680442 AATGCTTGTTGTGGTTTTAGTTTTT 57.320 28.000 0.00 0.00 0.00 1.94
3577 4191 5.240844 CCTGTTGTGGTTTTAGTTTAGGGAG 59.759 44.000 0.00 0.00 0.00 4.30
3580 4194 6.767423 TGTTGTGGTTTTAGTTTAGGGAGTAC 59.233 38.462 0.00 0.00 0.00 2.73
3592 4206 6.875726 AGTTTAGGGAGTACGAATTTACAACC 59.124 38.462 0.00 0.00 0.00 3.77
3596 4210 3.861689 GGAGTACGAATTTACAACCCTCG 59.138 47.826 0.00 0.00 35.68 4.63
3597 4211 4.380867 GGAGTACGAATTTACAACCCTCGA 60.381 45.833 0.00 0.00 33.81 4.04
3600 4214 5.636543 AGTACGAATTTACAACCCTCGAAAG 59.363 40.000 0.00 0.00 33.81 2.62
3601 4215 4.383173 ACGAATTTACAACCCTCGAAAGT 58.617 39.130 0.00 0.00 33.81 2.66
3603 4217 5.144359 CGAATTTACAACCCTCGAAAGTTG 58.856 41.667 20.13 20.13 46.95 3.16
3642 4257 3.940209 TTTGGCACTTGATTCATGGTC 57.060 42.857 4.75 0.00 0.00 4.02
3656 4271 2.066262 CATGGTCGCATATACCCGTTC 58.934 52.381 0.00 0.00 36.06 3.95
3739 4354 3.737972 GCTTGACCTGTGGTTTTTCCTTG 60.738 47.826 0.00 0.00 35.25 3.61
3741 4356 1.068588 GACCTGTGGTTTTTCCTTGCC 59.931 52.381 0.00 0.00 35.25 4.52
3744 4359 1.762370 CTGTGGTTTTTCCTTGCCCTT 59.238 47.619 0.00 0.00 37.07 3.95
3751 4366 2.897271 TTTCCTTGCCCTTATCTGCA 57.103 45.000 0.00 0.00 35.27 4.41
3817 4433 0.035317 TTGCATGTCCTCTGCGTTCT 59.965 50.000 0.00 0.00 42.62 3.01
3830 4446 2.088950 GCGTTCTGCACCTACCTAAA 57.911 50.000 0.00 0.00 45.45 1.85
3846 4462 9.134055 ACCTACCTAAATTGATCTGAGTAGTAC 57.866 37.037 0.00 0.00 0.00 2.73
3847 4463 9.357161 CCTACCTAAATTGATCTGAGTAGTACT 57.643 37.037 1.37 1.37 0.00 2.73
3849 4465 8.240267 ACCTAAATTGATCTGAGTAGTACTCC 57.760 38.462 24.32 11.54 44.44 3.85
3850 4466 7.839705 ACCTAAATTGATCTGAGTAGTACTCCA 59.160 37.037 24.32 13.75 44.44 3.86
3914 4530 4.949856 TCTGTTATTTTCTTCATGGCTCCC 59.050 41.667 0.00 0.00 0.00 4.30
3927 4543 0.808755 GGCTCCCAACGGTAATTGTG 59.191 55.000 0.00 0.00 0.00 3.33
3933 4549 2.230025 CCCAACGGTAATTGTGCAATGA 59.770 45.455 0.00 0.00 0.00 2.57
3941 4557 3.706600 AATTGTGCAATGATTTGGCCT 57.293 38.095 3.32 0.00 33.22 5.19
3943 4559 1.340088 TGTGCAATGATTTGGCCTGT 58.660 45.000 3.32 0.00 33.22 4.00
3974 4590 2.164338 GAGAGAGAACGAGGGTCAGTT 58.836 52.381 0.00 0.00 0.00 3.16
4053 4671 4.094887 AGGATTATTGTAAACGCACTGCAG 59.905 41.667 13.48 13.48 0.00 4.41
4061 4679 3.542712 AAACGCACTGCAGTTATTCTG 57.457 42.857 18.94 5.95 46.12 3.02
4067 4685 4.656041 GCACTGCAGTTATTCTGATGTTC 58.344 43.478 18.94 0.00 46.27 3.18
4225 4846 8.635765 TTATAGTTCATTAAATCCTCCCATGC 57.364 34.615 0.00 0.00 0.00 4.06
4226 4847 5.134725 AGTTCATTAAATCCTCCCATGCT 57.865 39.130 0.00 0.00 0.00 3.79
4227 4848 5.136105 AGTTCATTAAATCCTCCCATGCTC 58.864 41.667 0.00 0.00 0.00 4.26
4228 4849 4.104383 TCATTAAATCCTCCCATGCTCC 57.896 45.455 0.00 0.00 0.00 4.70
4229 4850 3.160269 CATTAAATCCTCCCATGCTCCC 58.840 50.000 0.00 0.00 0.00 4.30
4230 4851 1.905839 TAAATCCTCCCATGCTCCCA 58.094 50.000 0.00 0.00 0.00 4.37
4231 4852 0.554792 AAATCCTCCCATGCTCCCAG 59.445 55.000 0.00 0.00 0.00 4.45
4232 4853 2.004408 AATCCTCCCATGCTCCCAGC 62.004 60.000 0.00 0.00 42.82 4.85
4233 4854 2.929353 ATCCTCCCATGCTCCCAGCT 62.929 60.000 0.00 0.00 42.97 4.24
4234 4855 2.687610 CCTCCCATGCTCCCAGCTT 61.688 63.158 0.00 0.00 42.97 3.74
4235 4856 1.348008 CCTCCCATGCTCCCAGCTTA 61.348 60.000 0.00 0.00 42.97 3.09
4236 4857 0.548031 CTCCCATGCTCCCAGCTTAA 59.452 55.000 0.00 0.00 42.97 1.85
4237 4858 0.998928 TCCCATGCTCCCAGCTTAAA 59.001 50.000 0.00 0.00 42.97 1.52
4238 4859 1.357420 TCCCATGCTCCCAGCTTAAAA 59.643 47.619 0.00 0.00 42.97 1.52
4239 4860 2.178580 CCCATGCTCCCAGCTTAAAAA 58.821 47.619 0.00 0.00 42.97 1.94
4288 4909 9.775854 AAAAATTCATGGATGTTCACAATACAA 57.224 25.926 0.00 0.00 0.00 2.41
4289 4910 8.991243 AAATTCATGGATGTTCACAATACAAG 57.009 30.769 0.00 0.00 0.00 3.16
4290 4911 7.707624 ATTCATGGATGTTCACAATACAAGT 57.292 32.000 0.00 0.00 0.00 3.16
4291 4912 6.499234 TCATGGATGTTCACAATACAAGTG 57.501 37.500 0.00 0.00 38.32 3.16
4292 4913 6.003326 TCATGGATGTTCACAATACAAGTGT 58.997 36.000 0.00 0.00 38.16 3.55
4293 4914 6.489700 TCATGGATGTTCACAATACAAGTGTT 59.510 34.615 0.00 0.00 38.16 3.32
4294 4915 6.707440 TGGATGTTCACAATACAAGTGTTT 57.293 33.333 0.00 0.00 38.16 2.83
4295 4916 7.809546 TGGATGTTCACAATACAAGTGTTTA 57.190 32.000 0.00 0.00 38.16 2.01
4296 4917 7.644490 TGGATGTTCACAATACAAGTGTTTAC 58.356 34.615 0.00 0.00 38.16 2.01
4297 4918 7.283354 TGGATGTTCACAATACAAGTGTTTACA 59.717 33.333 0.00 0.00 38.16 2.41
4298 4919 8.132362 GGATGTTCACAATACAAGTGTTTACAA 58.868 33.333 0.00 0.00 38.16 2.41
4299 4920 8.850454 ATGTTCACAATACAAGTGTTTACAAC 57.150 30.769 0.00 0.00 38.16 3.32
4300 4921 8.046294 TGTTCACAATACAAGTGTTTACAACT 57.954 30.769 0.00 0.00 38.16 3.16
4301 4922 8.178964 TGTTCACAATACAAGTGTTTACAACTC 58.821 33.333 0.00 0.00 38.16 3.01
4302 4923 7.254227 TCACAATACAAGTGTTTACAACTCC 57.746 36.000 0.00 0.00 38.16 3.85
4303 4924 7.051623 TCACAATACAAGTGTTTACAACTCCT 58.948 34.615 0.00 0.00 38.16 3.69
4304 4925 8.205512 TCACAATACAAGTGTTTACAACTCCTA 58.794 33.333 0.00 0.00 38.16 2.94
4305 4926 8.832521 CACAATACAAGTGTTTACAACTCCTAA 58.167 33.333 0.00 0.00 32.44 2.69
4306 4927 9.398538 ACAATACAAGTGTTTACAACTCCTAAA 57.601 29.630 0.00 0.00 0.00 1.85
4333 4954 9.696917 AAAAATCAGATCCAAACTCAAATACAC 57.303 29.630 0.00 0.00 0.00 2.90
4334 4955 8.408043 AAATCAGATCCAAACTCAAATACACA 57.592 30.769 0.00 0.00 0.00 3.72
4335 4956 6.801539 TCAGATCCAAACTCAAATACACAC 57.198 37.500 0.00 0.00 0.00 3.82
4336 4957 6.533730 TCAGATCCAAACTCAAATACACACT 58.466 36.000 0.00 0.00 0.00 3.55
4337 4958 6.427853 TCAGATCCAAACTCAAATACACACTG 59.572 38.462 0.00 0.00 0.00 3.66
4338 4959 6.427853 CAGATCCAAACTCAAATACACACTGA 59.572 38.462 0.00 0.00 0.00 3.41
4339 4960 6.998074 AGATCCAAACTCAAATACACACTGAA 59.002 34.615 0.00 0.00 0.00 3.02
4340 4961 7.502226 AGATCCAAACTCAAATACACACTGAAA 59.498 33.333 0.00 0.00 0.00 2.69
4341 4962 7.581213 TCCAAACTCAAATACACACTGAAAT 57.419 32.000 0.00 0.00 0.00 2.17
4342 4963 8.684386 TCCAAACTCAAATACACACTGAAATA 57.316 30.769 0.00 0.00 0.00 1.40
4343 4964 9.126151 TCCAAACTCAAATACACACTGAAATAA 57.874 29.630 0.00 0.00 0.00 1.40
4344 4965 9.743057 CCAAACTCAAATACACACTGAAATAAA 57.257 29.630 0.00 0.00 0.00 1.40
4348 4969 9.965824 ACTCAAATACACACTGAAATAAAAAGG 57.034 29.630 0.00 0.00 0.00 3.11
4350 4971 9.959749 TCAAATACACACTGAAATAAAAAGGAC 57.040 29.630 0.00 0.00 0.00 3.85
4351 4972 9.743057 CAAATACACACTGAAATAAAAAGGACA 57.257 29.630 0.00 0.00 0.00 4.02
4355 4976 8.871686 ACACACTGAAATAAAAAGGACAAATC 57.128 30.769 0.00 0.00 0.00 2.17
4356 4977 7.926018 ACACACTGAAATAAAAAGGACAAATCC 59.074 33.333 0.00 0.00 46.69 3.01
4368 4989 3.600388 GGACAAATCCGTCATGAAGAGT 58.400 45.455 10.47 0.56 37.66 3.24
4369 4990 4.755411 GGACAAATCCGTCATGAAGAGTA 58.245 43.478 10.47 0.00 37.66 2.59
4370 4991 5.360591 GGACAAATCCGTCATGAAGAGTAT 58.639 41.667 10.47 0.00 37.66 2.12
4371 4992 5.463724 GGACAAATCCGTCATGAAGAGTATC 59.536 44.000 10.47 5.44 37.66 2.24
4372 4993 5.977635 ACAAATCCGTCATGAAGAGTATCA 58.022 37.500 10.47 0.00 37.82 2.15
4373 4994 6.406370 ACAAATCCGTCATGAAGAGTATCAA 58.594 36.000 10.47 0.00 37.82 2.57
4374 4995 6.878923 ACAAATCCGTCATGAAGAGTATCAAA 59.121 34.615 10.47 0.00 37.82 2.69
4375 4996 7.390440 ACAAATCCGTCATGAAGAGTATCAAAA 59.610 33.333 10.47 0.00 37.82 2.44
4376 4997 7.545362 AATCCGTCATGAAGAGTATCAAAAG 57.455 36.000 10.47 0.00 37.82 2.27
4377 4998 6.280855 TCCGTCATGAAGAGTATCAAAAGA 57.719 37.500 10.47 0.00 37.82 2.52
4378 4999 6.697395 TCCGTCATGAAGAGTATCAAAAGAA 58.303 36.000 10.47 0.00 37.82 2.52
4379 5000 6.813649 TCCGTCATGAAGAGTATCAAAAGAAG 59.186 38.462 10.47 0.00 37.82 2.85
4380 5001 6.813649 CCGTCATGAAGAGTATCAAAAGAAGA 59.186 38.462 10.47 0.00 37.82 2.87
4381 5002 7.201478 CCGTCATGAAGAGTATCAAAAGAAGAC 60.201 40.741 10.47 0.00 37.82 3.01
4382 5003 7.329471 CGTCATGAAGAGTATCAAAAGAAGACA 59.671 37.037 2.01 0.00 37.82 3.41
4383 5004 8.993121 GTCATGAAGAGTATCAAAAGAAGACAA 58.007 33.333 0.00 0.00 37.82 3.18
4384 5005 9.559732 TCATGAAGAGTATCAAAAGAAGACAAA 57.440 29.630 0.00 0.00 37.82 2.83
4387 5008 9.396022 TGAAGAGTATCAAAAGAAGACAAAAGT 57.604 29.630 0.00 0.00 37.82 2.66
4388 5009 9.657121 GAAGAGTATCAAAAGAAGACAAAAGTG 57.343 33.333 0.00 0.00 37.82 3.16
4389 5010 8.964476 AGAGTATCAAAAGAAGACAAAAGTGA 57.036 30.769 0.00 0.00 37.82 3.41
4390 5011 9.396022 AGAGTATCAAAAGAAGACAAAAGTGAA 57.604 29.630 0.00 0.00 37.82 3.18
4391 5012 9.657121 GAGTATCAAAAGAAGACAAAAGTGAAG 57.343 33.333 0.00 0.00 33.17 3.02
4392 5013 9.396022 AGTATCAAAAGAAGACAAAAGTGAAGA 57.604 29.630 0.00 0.00 0.00 2.87
4395 5016 7.483307 TCAAAAGAAGACAAAAGTGAAGATGG 58.517 34.615 0.00 0.00 0.00 3.51
4396 5017 7.122650 TCAAAAGAAGACAAAAGTGAAGATGGT 59.877 33.333 0.00 0.00 0.00 3.55
4397 5018 8.405531 CAAAAGAAGACAAAAGTGAAGATGGTA 58.594 33.333 0.00 0.00 0.00 3.25
4398 5019 7.736447 AAGAAGACAAAAGTGAAGATGGTAG 57.264 36.000 0.00 0.00 0.00 3.18
4399 5020 6.831976 AGAAGACAAAAGTGAAGATGGTAGT 58.168 36.000 0.00 0.00 0.00 2.73
4400 5021 7.963532 AGAAGACAAAAGTGAAGATGGTAGTA 58.036 34.615 0.00 0.00 0.00 1.82
4401 5022 8.598041 AGAAGACAAAAGTGAAGATGGTAGTAT 58.402 33.333 0.00 0.00 0.00 2.12
4402 5023 9.220767 GAAGACAAAAGTGAAGATGGTAGTATT 57.779 33.333 0.00 0.00 0.00 1.89
4403 5024 8.779354 AGACAAAAGTGAAGATGGTAGTATTC 57.221 34.615 0.00 0.00 0.00 1.75
4404 5025 8.375506 AGACAAAAGTGAAGATGGTAGTATTCA 58.624 33.333 0.00 0.00 0.00 2.57
4405 5026 8.324163 ACAAAAGTGAAGATGGTAGTATTCAC 57.676 34.615 8.48 8.48 45.76 3.18
4410 5031 7.706281 GTGAAGATGGTAGTATTCACATCTG 57.294 40.000 11.02 0.00 46.68 2.90
4411 5032 6.703607 GTGAAGATGGTAGTATTCACATCTGG 59.296 42.308 11.02 0.00 46.68 3.86
4412 5033 6.611236 TGAAGATGGTAGTATTCACATCTGGA 59.389 38.462 6.77 0.00 46.68 3.86
4413 5034 7.290948 TGAAGATGGTAGTATTCACATCTGGAT 59.709 37.037 6.77 0.00 46.68 3.41
4414 5035 8.727100 AAGATGGTAGTATTCACATCTGGATA 57.273 34.615 6.77 0.00 46.68 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 111 1.953686 GACAGCCTCTCTAGCGAAGAT 59.046 52.381 0.00 0.00 32.41 2.40
119 120 1.752694 GAGGAGCGACAGCCTCTCT 60.753 63.158 0.00 0.00 45.72 3.10
158 159 1.076923 AGTCTCGATGGCCCGTAGT 60.077 57.895 0.00 0.00 0.00 2.73
166 167 1.747924 TCTTGAGCTCAGTCTCGATGG 59.252 52.381 17.43 0.83 35.90 3.51
179 180 1.949525 TGCTGTTCCTTGTTCTTGAGC 59.050 47.619 0.00 0.00 0.00 4.26
232 234 2.100631 CCGAGAACATGGGTGCGAC 61.101 63.158 0.00 0.00 0.00 5.19
304 306 0.811915 ACGACACGATCTGGAAGGAG 59.188 55.000 0.00 0.00 0.00 3.69
312 314 0.452184 CTACAGGCACGACACGATCT 59.548 55.000 0.00 0.00 0.00 2.75
327 329 0.396435 CACACTCCCAGCAACCTACA 59.604 55.000 0.00 0.00 0.00 2.74
336 338 2.301346 GGGCATAATTCACACTCCCAG 58.699 52.381 0.00 0.00 32.68 4.45
361 367 5.577164 GCTACTTTCTCAACAATCTTCGCTA 59.423 40.000 0.00 0.00 0.00 4.26
362 368 4.390297 GCTACTTTCTCAACAATCTTCGCT 59.610 41.667 0.00 0.00 0.00 4.93
404 413 8.904834 TCTTAAGCAGTTGTACCAAAAATAACA 58.095 29.630 0.00 0.00 0.00 2.41
440 450 1.553690 GCTACAGAACCAGGGGCTGA 61.554 60.000 15.63 1.88 32.44 4.26
441 451 1.078143 GCTACAGAACCAGGGGCTG 60.078 63.158 8.81 8.81 35.81 4.85
445 455 1.630878 AGAAAGGCTACAGAACCAGGG 59.369 52.381 0.00 0.00 0.00 4.45
503 528 5.303078 TCAGGCTCCACATCTTCTATCTAAC 59.697 44.000 0.00 0.00 0.00 2.34
505 530 4.830046 GTCAGGCTCCACATCTTCTATCTA 59.170 45.833 0.00 0.00 0.00 1.98
506 531 3.640967 GTCAGGCTCCACATCTTCTATCT 59.359 47.826 0.00 0.00 0.00 1.98
507 532 3.386078 TGTCAGGCTCCACATCTTCTATC 59.614 47.826 0.00 0.00 0.00 2.08
508 533 3.378512 TGTCAGGCTCCACATCTTCTAT 58.621 45.455 0.00 0.00 0.00 1.98
520 545 0.320697 AAACCCGTACTGTCAGGCTC 59.679 55.000 4.53 0.00 0.00 4.70
581 606 1.753073 CCAAATAAGGCAGCAGGAAGG 59.247 52.381 0.00 0.00 0.00 3.46
611 642 0.889994 AACAGTCGCATGGGTACGTA 59.110 50.000 9.86 0.00 0.00 3.57
617 648 2.398554 CCGGAAACAGTCGCATGGG 61.399 63.158 0.00 2.76 0.00 4.00
628 661 2.434359 CGTCCCTCAGCCGGAAAC 60.434 66.667 5.05 0.00 0.00 2.78
682 715 1.265365 GGAAGCAACACAAGCTGAGAC 59.735 52.381 0.00 0.00 42.53 3.36
683 716 1.141657 AGGAAGCAACACAAGCTGAGA 59.858 47.619 0.00 0.00 42.53 3.27
684 717 1.534595 GAGGAAGCAACACAAGCTGAG 59.465 52.381 0.00 0.00 42.53 3.35
685 718 1.597742 GAGGAAGCAACACAAGCTGA 58.402 50.000 0.00 0.00 42.53 4.26
695 728 1.228245 AGCAAAGCCGAGGAAGCAA 60.228 52.632 0.00 0.00 0.00 3.91
702 735 5.679734 ATTTGTATATCAGCAAAGCCGAG 57.320 39.130 0.00 0.00 37.89 4.63
776 819 6.566197 AAAAAGTCTCTCATAACAGCCAAG 57.434 37.500 0.00 0.00 0.00 3.61
803 847 8.726068 CGTCTCATATATAGTCCTATATGCCAG 58.274 40.741 14.37 8.49 39.97 4.85
813 857 8.384607 TGCATATCTCGTCTCATATATAGTCC 57.615 38.462 0.00 0.00 0.00 3.85
814 858 9.824534 CATGCATATCTCGTCTCATATATAGTC 57.175 37.037 0.00 0.00 0.00 2.59
815 859 8.296000 GCATGCATATCTCGTCTCATATATAGT 58.704 37.037 14.21 0.00 0.00 2.12
817 861 7.309438 GGGCATGCATATCTCGTCTCATATATA 60.309 40.741 21.36 0.00 0.00 0.86
818 862 6.453943 GGCATGCATATCTCGTCTCATATAT 58.546 40.000 21.36 0.00 0.00 0.86
819 863 5.221322 GGGCATGCATATCTCGTCTCATATA 60.221 44.000 21.36 0.00 0.00 0.86
820 864 4.442612 GGGCATGCATATCTCGTCTCATAT 60.443 45.833 21.36 0.00 0.00 1.78
821 865 3.118992 GGGCATGCATATCTCGTCTCATA 60.119 47.826 21.36 0.00 0.00 2.15
822 866 2.354503 GGGCATGCATATCTCGTCTCAT 60.355 50.000 21.36 0.00 0.00 2.90
823 867 1.001293 GGGCATGCATATCTCGTCTCA 59.999 52.381 21.36 0.00 0.00 3.27
847 891 4.959560 AACAGATGCTGCAGATATCTCT 57.040 40.909 23.30 14.12 34.37 3.10
873 917 3.198635 TCCTACTTCCCTGCAAATCTCTG 59.801 47.826 0.00 0.00 0.00 3.35
874 918 3.454858 TCCTACTTCCCTGCAAATCTCT 58.545 45.455 0.00 0.00 0.00 3.10
888 932 0.832559 GGCTAGCCGGGATCCTACTT 60.833 60.000 20.16 0.00 0.00 2.24
911 957 0.445436 GCGCTCTCAGATTGTGTTGG 59.555 55.000 0.00 0.00 0.00 3.77
946 992 3.443045 CATGGCAAGGGTCCACGC 61.443 66.667 0.00 0.00 36.26 5.34
949 995 1.724148 TTCACCATGGCAAGGGTCCA 61.724 55.000 13.04 0.21 38.81 4.02
1009 1148 3.967335 GGCGAGGTCGATCTCCCG 61.967 72.222 19.87 11.13 43.02 5.14
1089 1228 1.134280 CCTAGGACCTGTCTGCCATTG 60.134 57.143 1.05 0.00 0.00 2.82
1099 1238 1.853963 ACAGTGCTACCTAGGACCTG 58.146 55.000 17.98 14.58 44.55 4.00
1107 1246 1.678627 CGCAGAGATACAGTGCTACCT 59.321 52.381 0.00 0.00 34.92 3.08
1112 1251 2.791383 AGATCGCAGAGATACAGTGC 57.209 50.000 0.00 0.00 43.63 4.40
1113 1252 4.039151 ACAAGATCGCAGAGATACAGTG 57.961 45.455 0.00 0.00 43.63 3.66
1114 1253 4.727507 AACAAGATCGCAGAGATACAGT 57.272 40.909 0.00 0.00 43.63 3.55
1115 1254 7.706281 AATAAACAAGATCGCAGAGATACAG 57.294 36.000 0.00 0.00 43.63 2.74
1116 1255 7.981789 AGAAATAAACAAGATCGCAGAGATACA 59.018 33.333 0.00 0.00 43.63 2.29
1117 1256 8.359060 AGAAATAAACAAGATCGCAGAGATAC 57.641 34.615 0.00 0.00 43.63 2.24
1145 1284 4.675510 CACCAAATTAAAGAGCATCGCAT 58.324 39.130 0.00 0.00 42.67 4.73
1147 1286 2.854185 GCACCAAATTAAAGAGCATCGC 59.146 45.455 0.00 0.00 42.67 4.58
1158 1297 2.042464 TGCCAAACCAGCACCAAATTA 58.958 42.857 0.00 0.00 34.69 1.40
1168 1307 2.154462 AGATTCGAAGTGCCAAACCAG 58.846 47.619 3.35 0.00 0.00 4.00
1176 1315 9.190858 GATGATCCATATATAGATTCGAAGTGC 57.809 37.037 3.35 0.00 0.00 4.40
1249 1388 0.670239 TGACGCGTACGGACTAGACA 60.670 55.000 13.97 0.00 46.04 3.41
1302 1441 7.041848 ACAAAAGCAGAAACATAAATTTCCAGC 60.042 33.333 0.00 0.00 39.05 4.85
1334 1473 1.262417 TTAGCATGGTCCACTGACGA 58.738 50.000 0.00 0.00 42.73 4.20
1335 1474 2.315925 ATTAGCATGGTCCACTGACG 57.684 50.000 0.00 0.00 42.73 4.35
1336 1475 3.378427 GGAAATTAGCATGGTCCACTGAC 59.622 47.826 0.00 0.00 40.98 3.51
1337 1476 3.620488 GGAAATTAGCATGGTCCACTGA 58.380 45.455 0.00 0.00 0.00 3.41
1338 1477 2.689983 GGGAAATTAGCATGGTCCACTG 59.310 50.000 0.00 0.00 0.00 3.66
1339 1478 2.582636 AGGGAAATTAGCATGGTCCACT 59.417 45.455 0.00 0.00 0.00 4.00
1340 1479 2.689983 CAGGGAAATTAGCATGGTCCAC 59.310 50.000 0.00 0.00 0.00 4.02
1345 1484 2.077687 AGGCAGGGAAATTAGCATGG 57.922 50.000 0.00 0.00 0.00 3.66
1368 1507 5.185454 TCACTCATAACATCAATGGACCAC 58.815 41.667 0.00 0.00 0.00 4.16
1379 1518 9.664332 GCCTTATGATTCTATCACTCATAACAT 57.336 33.333 0.00 0.00 43.01 2.71
1380 1519 8.874156 AGCCTTATGATTCTATCACTCATAACA 58.126 33.333 0.00 0.00 43.01 2.41
1381 1520 9.364989 GAGCCTTATGATTCTATCACTCATAAC 57.635 37.037 0.00 0.00 43.01 1.89
1382 1521 9.093458 TGAGCCTTATGATTCTATCACTCATAA 57.907 33.333 0.00 0.00 43.01 1.90
1384 1523 7.385267 GTGAGCCTTATGATTCTATCACTCAT 58.615 38.462 8.97 0.00 43.01 2.90
1385 1524 6.239430 GGTGAGCCTTATGATTCTATCACTCA 60.239 42.308 0.00 0.00 43.01 3.41
1386 1525 6.014669 AGGTGAGCCTTATGATTCTATCACTC 60.015 42.308 0.00 0.00 44.18 3.51
1393 1740 4.851639 AACAGGTGAGCCTTATGATTCT 57.148 40.909 0.00 0.00 44.18 2.40
1410 1757 4.199432 AGCTCCACATCTACTCAAACAG 57.801 45.455 0.00 0.00 0.00 3.16
1412 1759 7.550906 AGATTAAAGCTCCACATCTACTCAAAC 59.449 37.037 0.00 0.00 0.00 2.93
1421 1768 6.705863 ATTCCAAGATTAAAGCTCCACATC 57.294 37.500 0.00 0.00 0.00 3.06
1422 1769 6.664816 TCAATTCCAAGATTAAAGCTCCACAT 59.335 34.615 0.00 0.00 0.00 3.21
1424 1771 6.515272 TCAATTCCAAGATTAAAGCTCCAC 57.485 37.500 0.00 0.00 0.00 4.02
1425 1772 7.722949 ATTCAATTCCAAGATTAAAGCTCCA 57.277 32.000 0.00 0.00 0.00 3.86
1430 1777 8.397906 TCGCACTATTCAATTCCAAGATTAAAG 58.602 33.333 0.00 0.00 0.00 1.85
1433 1780 7.857734 TTCGCACTATTCAATTCCAAGATTA 57.142 32.000 0.00 0.00 0.00 1.75
1434 1781 6.757897 TTCGCACTATTCAATTCCAAGATT 57.242 33.333 0.00 0.00 0.00 2.40
1436 1783 5.006649 CGATTCGCACTATTCAATTCCAAGA 59.993 40.000 0.00 0.00 0.00 3.02
1437 1784 5.200454 CGATTCGCACTATTCAATTCCAAG 58.800 41.667 0.00 0.00 0.00 3.61
1438 1785 4.035091 CCGATTCGCACTATTCAATTCCAA 59.965 41.667 0.00 0.00 0.00 3.53
1440 1787 3.607078 GCCGATTCGCACTATTCAATTCC 60.607 47.826 0.00 0.00 0.00 3.01
1441 1788 3.248602 AGCCGATTCGCACTATTCAATTC 59.751 43.478 0.00 0.00 0.00 2.17
1442 1789 3.002656 CAGCCGATTCGCACTATTCAATT 59.997 43.478 0.00 0.00 0.00 2.32
1453 1816 0.320247 AGATGATCCAGCCGATTCGC 60.320 55.000 0.00 0.00 0.00 4.70
1455 1818 3.065655 CAGAAGATGATCCAGCCGATTC 58.934 50.000 0.00 0.00 0.00 2.52
1459 1822 1.134580 ACACAGAAGATGATCCAGCCG 60.135 52.381 0.00 0.00 0.00 5.52
1462 1825 7.160049 AGCATATAACACAGAAGATGATCCAG 58.840 38.462 0.00 0.00 0.00 3.86
1488 1851 9.112725 GCCATACTATGTGCATGATGATAATAA 57.887 33.333 0.00 0.00 0.00 1.40
1489 1852 8.488668 AGCCATACTATGTGCATGATGATAATA 58.511 33.333 0.00 0.00 0.00 0.98
1490 1853 7.282450 CAGCCATACTATGTGCATGATGATAAT 59.718 37.037 0.00 0.00 0.00 1.28
1499 1862 5.624159 ACAATACAGCCATACTATGTGCAT 58.376 37.500 0.00 0.00 0.00 3.96
1506 1869 7.819415 GCAGATGATAACAATACAGCCATACTA 59.181 37.037 0.00 0.00 0.00 1.82
1510 1873 5.472478 CAGCAGATGATAACAATACAGCCAT 59.528 40.000 0.00 0.00 0.00 4.40
1512 1875 4.320057 GCAGCAGATGATAACAATACAGCC 60.320 45.833 0.00 0.00 0.00 4.85
1513 1876 4.274214 TGCAGCAGATGATAACAATACAGC 59.726 41.667 0.00 0.00 0.00 4.40
1514 1877 5.996669 TGCAGCAGATGATAACAATACAG 57.003 39.130 0.00 0.00 0.00 2.74
1516 1879 6.140786 CACATGCAGCAGATGATAACAATAC 58.859 40.000 0.00 0.00 0.00 1.89
1517 1880 5.278120 GCACATGCAGCAGATGATAACAATA 60.278 40.000 11.99 0.00 41.59 1.90
1518 1881 4.499188 GCACATGCAGCAGATGATAACAAT 60.499 41.667 11.99 0.00 41.59 2.71
1519 1882 3.181494 GCACATGCAGCAGATGATAACAA 60.181 43.478 11.99 0.00 41.59 2.83
1520 1883 2.356695 GCACATGCAGCAGATGATAACA 59.643 45.455 11.99 0.00 41.59 2.41
1521 1884 2.996155 GCACATGCAGCAGATGATAAC 58.004 47.619 11.99 0.00 41.59 1.89
1551 1914 9.241317 GGTCTGAATTATAAATTGTTCATGCAG 57.759 33.333 0.00 0.00 30.97 4.41
1554 1917 9.956720 GAGGGTCTGAATTATAAATTGTTCATG 57.043 33.333 0.86 0.00 30.97 3.07
1576 1941 2.586258 ATGACGACGAATTGAGAGGG 57.414 50.000 0.00 0.00 0.00 4.30
1580 1945 7.621102 TGATTTATCAATGACGACGAATTGAG 58.379 34.615 24.19 7.48 43.88 3.02
1582 1947 8.063630 TGATGATTTATCAATGACGACGAATTG 58.936 33.333 16.64 16.64 42.69 2.32
1612 2014 0.320421 ATCAACGTGTCCAAGGTCCG 60.320 55.000 0.00 0.00 0.00 4.79
1615 2017 2.368875 AGAAGATCAACGTGTCCAAGGT 59.631 45.455 0.00 0.00 0.00 3.50
1627 2029 5.451798 GCAGGAACAAACCAAAGAAGATCAA 60.452 40.000 0.00 0.00 0.00 2.57
1639 2041 2.229062 GGAGCTTTAGCAGGAACAAACC 59.771 50.000 4.33 0.00 45.16 3.27
1643 2045 1.419762 TGTGGAGCTTTAGCAGGAACA 59.580 47.619 4.33 0.69 45.16 3.18
1644 2046 2.185004 TGTGGAGCTTTAGCAGGAAC 57.815 50.000 4.33 0.00 45.16 3.62
1657 2059 4.872691 GGACATCTAAAGACACATGTGGAG 59.127 45.833 28.64 16.59 34.19 3.86
1661 2063 5.728471 CTCAGGACATCTAAAGACACATGT 58.272 41.667 0.00 0.00 32.02 3.21
1674 2076 3.064545 GCACATTACTTGCTCAGGACATC 59.935 47.826 0.00 0.00 37.00 3.06
1677 2079 2.426522 TGCACATTACTTGCTCAGGAC 58.573 47.619 0.00 0.00 40.86 3.85
1679 2081 3.441222 TGAATGCACATTACTTGCTCAGG 59.559 43.478 0.00 0.00 40.86 3.86
1681 2083 6.598850 TCTTATGAATGCACATTACTTGCTCA 59.401 34.615 0.00 0.00 40.86 4.26
1682 2084 7.019774 TCTTATGAATGCACATTACTTGCTC 57.980 36.000 0.00 0.00 40.86 4.26
1683 2085 7.578310 ATCTTATGAATGCACATTACTTGCT 57.422 32.000 0.00 0.00 40.86 3.91
1684 2086 9.734620 TTAATCTTATGAATGCACATTACTTGC 57.265 29.630 0.00 0.00 40.63 4.01
1738 2142 7.064253 GCTTAAGGTTCGCTGACTATTAAGAAA 59.936 37.037 4.29 0.00 34.44 2.52
1744 2148 4.473477 AGCTTAAGGTTCGCTGACTATT 57.527 40.909 0.12 0.00 31.82 1.73
1752 2156 2.024176 TGGATCAGCTTAAGGTTCGC 57.976 50.000 3.96 0.00 0.00 4.70
1753 2157 3.372206 CACTTGGATCAGCTTAAGGTTCG 59.628 47.826 3.96 0.00 0.00 3.95
1760 2164 2.299013 ACACGACACTTGGATCAGCTTA 59.701 45.455 0.00 0.00 0.00 3.09
1770 2174 1.808411 ATGGCCTAACACGACACTTG 58.192 50.000 3.32 0.00 0.00 3.16
1772 2176 2.561478 AAATGGCCTAACACGACACT 57.439 45.000 3.32 0.00 0.00 3.55
1773 2177 3.687698 ACATAAATGGCCTAACACGACAC 59.312 43.478 3.32 0.00 0.00 3.67
1775 2179 4.957759 AACATAAATGGCCTAACACGAC 57.042 40.909 3.32 0.00 0.00 4.34
1778 2182 8.051901 AGAGTTAAACATAAATGGCCTAACAC 57.948 34.615 3.32 0.00 0.00 3.32
1780 2184 8.520351 ACAAGAGTTAAACATAAATGGCCTAAC 58.480 33.333 3.32 0.60 0.00 2.34
1783 2187 8.107095 TCTACAAGAGTTAAACATAAATGGCCT 58.893 33.333 3.32 0.00 0.00 5.19
1784 2188 8.276252 TCTACAAGAGTTAAACATAAATGGCC 57.724 34.615 0.00 0.00 0.00 5.36
1792 2349 7.169308 CCGCGAATATCTACAAGAGTTAAACAT 59.831 37.037 8.23 0.00 0.00 2.71
1798 2355 3.181479 TGCCGCGAATATCTACAAGAGTT 60.181 43.478 8.23 0.00 0.00 3.01
1804 2361 1.428448 GCATGCCGCGAATATCTACA 58.572 50.000 8.23 0.00 0.00 2.74
1805 2362 0.721718 GGCATGCCGCGAATATCTAC 59.278 55.000 23.48 0.00 43.84 2.59
1817 2374 0.872881 GATTGCAATGACGGCATGCC 60.873 55.000 27.67 27.67 41.58 4.40
1822 2379 1.621107 CACAAGATTGCAATGACGGC 58.379 50.000 18.59 1.32 0.00 5.68
1823 2380 1.621107 GCACAAGATTGCAATGACGG 58.379 50.000 18.59 6.07 42.49 4.79
1834 2392 3.719268 TTATGGACCTGTGCACAAGAT 57.281 42.857 22.07 9.59 32.58 2.40
1842 2400 3.569701 GGGCATGTATTTATGGACCTGTG 59.430 47.826 0.00 0.00 0.00 3.66
1843 2401 3.463329 AGGGCATGTATTTATGGACCTGT 59.537 43.478 0.00 0.00 0.00 4.00
1846 2404 7.148069 GCTATTTAGGGCATGTATTTATGGACC 60.148 40.741 0.00 0.00 0.00 4.46
1849 2407 7.701539 TGCTATTTAGGGCATGTATTTATGG 57.298 36.000 0.00 0.00 33.23 2.74
1858 2416 9.715121 ATTTGATAAAATGCTATTTAGGGCATG 57.285 29.630 1.16 0.00 46.70 4.06
1887 2445 8.270030 TGAGGATGTTCATCAGAGATATTTTGT 58.730 33.333 13.64 0.00 31.68 2.83
1896 2454 5.485620 TGAACTTGAGGATGTTCATCAGAG 58.514 41.667 13.64 8.14 44.89 3.35
1913 2471 9.614792 AGAACTCAAAAGTATACAACTGAACTT 57.385 29.630 5.50 0.00 38.88 2.66
1914 2472 9.046296 CAGAACTCAAAAGTATACAACTGAACT 57.954 33.333 5.50 2.33 38.88 3.01
1915 2473 8.827677 ACAGAACTCAAAAGTATACAACTGAAC 58.172 33.333 5.50 0.41 38.88 3.18
1917 2475 8.826710 CAACAGAACTCAAAAGTATACAACTGA 58.173 33.333 5.50 3.47 38.88 3.41
1918 2476 8.826710 TCAACAGAACTCAAAAGTATACAACTG 58.173 33.333 5.50 0.00 38.88 3.16
1919 2477 8.958119 TCAACAGAACTCAAAAGTATACAACT 57.042 30.769 5.50 0.00 41.49 3.16
1920 2478 9.997482 TTTCAACAGAACTCAAAAGTATACAAC 57.003 29.630 5.50 0.00 33.48 3.32
1950 2508 4.450757 GCATTTTGGCAGTTCGGTAAAATT 59.549 37.500 0.00 0.00 30.88 1.82
1951 2509 3.993736 GCATTTTGGCAGTTCGGTAAAAT 59.006 39.130 0.00 0.00 32.82 1.82
1959 2517 0.318955 AGTGCGCATTTTGGCAGTTC 60.319 50.000 15.91 0.00 39.70 3.01
1961 2519 0.240945 GTAGTGCGCATTTTGGCAGT 59.759 50.000 15.91 0.00 44.49 4.40
1968 2526 3.719699 GGCATTGTAGTGCGCATTT 57.280 47.368 15.91 8.14 45.97 2.32
1986 2544 1.144936 CTTTGGGAGCTAGCTCGGG 59.855 63.158 32.78 18.66 43.59 5.14
2056 2614 3.181450 CCATCTTCTCCCCACTCCAATAC 60.181 52.174 0.00 0.00 0.00 1.89
2064 2622 3.117888 TCATAAAGCCATCTTCTCCCCAC 60.118 47.826 0.00 0.00 0.00 4.61
2092 2650 4.177026 TCGCTCTGAGTAGAAATTTCAGC 58.823 43.478 19.99 15.57 38.52 4.26
2110 2668 0.615331 TCCTTCCTGAATGCTTCGCT 59.385 50.000 0.00 0.00 0.00 4.93
2196 2754 2.140717 GGTAATACAGTATGCGGGTGC 58.859 52.381 0.00 0.00 42.53 5.01
2197 2755 3.462483 TGGTAATACAGTATGCGGGTG 57.538 47.619 0.00 0.00 42.53 4.61
2200 2758 6.371809 AAACATTGGTAATACAGTATGCGG 57.628 37.500 0.00 0.00 42.53 5.69
2201 2759 9.381027 CATTAAACATTGGTAATACAGTATGCG 57.619 33.333 0.00 0.00 42.53 4.73
2240 2800 0.981183 AATGAACTGACGCTACCCCA 59.019 50.000 0.00 0.00 0.00 4.96
2244 2804 2.735134 ACCGAAAATGAACTGACGCTAC 59.265 45.455 0.00 0.00 0.00 3.58
2245 2805 2.734606 CACCGAAAATGAACTGACGCTA 59.265 45.455 0.00 0.00 0.00 4.26
2246 2806 1.531149 CACCGAAAATGAACTGACGCT 59.469 47.619 0.00 0.00 0.00 5.07
2247 2807 1.950472 CACCGAAAATGAACTGACGC 58.050 50.000 0.00 0.00 0.00 5.19
2267 2832 7.463648 CGGTCTTGAGGTAACATTGTTATAACG 60.464 40.741 12.16 0.00 41.41 3.18
2288 2853 4.261489 CGTTGTAGTGCCTATTATCGGTCT 60.261 45.833 0.00 0.00 0.00 3.85
2297 2865 1.825474 AGACAGCGTTGTAGTGCCTAT 59.175 47.619 4.38 0.00 37.76 2.57
2311 2879 6.183360 ACACAAAGAAAAACTCAGTAGACAGC 60.183 38.462 0.00 0.00 0.00 4.40
2318 2886 5.708230 TGTACCACACAAAGAAAAACTCAGT 59.292 36.000 0.00 0.00 32.95 3.41
2325 2900 7.490725 CACATTCAATGTACCACACAAAGAAAA 59.509 33.333 1.72 0.00 42.70 2.29
2354 2931 5.006165 CGATGAACTGCAAGGAAGAGAATAC 59.994 44.000 0.00 0.00 39.30 1.89
2356 2933 3.937706 CGATGAACTGCAAGGAAGAGAAT 59.062 43.478 0.00 0.00 39.30 2.40
2391 2968 2.102588 GGAATGCTACGGTCAGTGGTAT 59.897 50.000 0.00 0.00 38.19 2.73
2416 2993 2.428236 CTGCTCTCGCCGCTATCG 60.428 66.667 0.00 0.00 34.43 2.92
2442 3019 0.675633 GGCTCTCTCTGGCAGATCTC 59.324 60.000 19.11 5.82 0.00 2.75
2443 3020 0.262580 AGGCTCTCTCTGGCAGATCT 59.737 55.000 19.11 6.27 0.00 2.75
2487 3064 9.693739 ATAGATATCGTCTCAGTGATCCTAAAT 57.306 33.333 0.00 0.00 38.42 1.40
2495 3072 7.065204 GTGAGCATATAGATATCGTCTCAGTGA 59.935 40.741 0.00 0.00 38.42 3.41
2505 3082 4.339530 TCGCCCTGTGAGCATATAGATATC 59.660 45.833 0.00 0.00 0.00 1.63
2507 3084 3.696548 CTCGCCCTGTGAGCATATAGATA 59.303 47.826 0.00 0.00 33.39 1.98
2526 3103 6.901887 CACAATTTTGTATCCGATCTTTCTCG 59.098 38.462 0.00 0.00 39.91 4.04
2578 3155 0.253044 CTAGCCAGCTTGCTTACCCA 59.747 55.000 18.52 0.00 42.75 4.51
2599 3176 4.314522 TTGGAAGATATGTGGGAGCAAA 57.685 40.909 0.00 0.00 0.00 3.68
2601 3178 3.181440 GGATTGGAAGATATGTGGGAGCA 60.181 47.826 0.00 0.00 0.00 4.26
2602 3179 3.416156 GGATTGGAAGATATGTGGGAGC 58.584 50.000 0.00 0.00 0.00 4.70
2609 3186 4.820897 TCGGATTCGGATTGGAAGATATG 58.179 43.478 0.00 0.00 36.95 1.78
2623 3200 1.068588 TGCTGGTTATCCTCGGATTCG 59.931 52.381 3.41 0.00 36.17 3.34
2641 3218 8.400947 TCTGCAAAAGAAAATATATGAGAGTGC 58.599 33.333 0.00 0.00 29.54 4.40
2644 3221 9.932699 CAGTCTGCAAAAGAAAATATATGAGAG 57.067 33.333 0.00 0.00 36.40 3.20
2689 3266 3.727726 TGACATTCCGATGCACGATATT 58.272 40.909 9.75 0.00 45.77 1.28
2704 3281 2.490903 GCATGCTCTCAGGTTTGACATT 59.509 45.455 11.37 0.00 0.00 2.71
2720 3297 0.170561 CTCTGTGCCAAGAAGCATGC 59.829 55.000 10.51 10.51 46.24 4.06
2732 3309 4.803426 CGACCGCCTCCTCTGTGC 62.803 72.222 0.00 0.00 0.00 4.57
2734 3311 0.896940 TTAACGACCGCCTCCTCTGT 60.897 55.000 0.00 0.00 0.00 3.41
2741 3318 0.743345 GGCAATCTTAACGACCGCCT 60.743 55.000 0.00 0.00 38.60 5.52
2742 3319 1.719709 GGCAATCTTAACGACCGCC 59.280 57.895 0.00 0.00 35.76 6.13
2776 3353 1.675714 CGGATTCTTAGCCTGCACACA 60.676 52.381 0.00 0.00 0.00 3.72
2812 3398 2.112815 GGGCCATGTAACCGAGTGC 61.113 63.158 4.39 0.00 0.00 4.40
2814 3400 1.910580 CTGGGGCCATGTAACCGAGT 61.911 60.000 4.39 0.00 0.00 4.18
2832 3427 1.065126 GGTTGGCAGCAAGATACCTCT 60.065 52.381 3.14 0.00 0.00 3.69
2905 3509 6.128580 ACAGAAAAACAACAACAACAGATTGC 60.129 34.615 0.00 0.00 39.66 3.56
2906 3510 7.228840 CACAGAAAAACAACAACAACAGATTG 58.771 34.615 0.00 0.00 41.98 2.67
2908 3512 5.348451 GCACAGAAAAACAACAACAACAGAT 59.652 36.000 0.00 0.00 0.00 2.90
2910 3514 4.447054 TGCACAGAAAAACAACAACAACAG 59.553 37.500 0.00 0.00 0.00 3.16
2920 3524 5.221224 CCTCAATAACCTGCACAGAAAAACA 60.221 40.000 0.00 0.00 0.00 2.83
2921 3525 5.222631 CCTCAATAACCTGCACAGAAAAAC 58.777 41.667 0.00 0.00 0.00 2.43
2929 3533 1.474077 CTTGCCCTCAATAACCTGCAC 59.526 52.381 0.00 0.00 0.00 4.57
2961 3565 4.378459 CCAAAGCTGTAAACATCGGACTTC 60.378 45.833 0.00 0.00 0.00 3.01
2966 3570 2.432444 TCCCAAAGCTGTAAACATCGG 58.568 47.619 0.00 0.00 0.00 4.18
2999 3603 2.208431 GCATGTCACAGCAGTAGATCC 58.792 52.381 0.00 0.00 0.00 3.36
3042 3646 1.272769 ACAGCAAACGAGACCTCTACC 59.727 52.381 0.00 0.00 0.00 3.18
3056 3660 5.512753 ACATACATTGTGAACAACAGCAA 57.487 34.783 0.00 0.00 40.74 3.91
3099 3706 9.420118 TGCATAATTCTTCTGGGTGTAATATTT 57.580 29.630 0.00 0.00 0.00 1.40
3121 3728 7.902387 TGTTTTAACACATATTTGCATGCAT 57.098 28.000 23.37 10.46 33.17 3.96
3176 3790 3.794028 TGCACACGACATAAAAAGCAAAC 59.206 39.130 0.00 0.00 0.00 2.93
3180 3794 5.216566 TCTATGCACACGACATAAAAAGC 57.783 39.130 0.00 0.00 29.93 3.51
3182 3796 7.463544 CAGATTCTATGCACACGACATAAAAA 58.536 34.615 0.00 0.00 29.93 1.94
3191 3805 1.256376 GTCGCAGATTCTATGCACACG 59.744 52.381 0.00 0.00 44.05 4.49
3213 3827 2.758089 GCAGCAGCGTGGGATCTTG 61.758 63.158 0.00 0.00 0.00 3.02
3233 3847 3.185299 ATGTTCGCCAACCGGGTCA 62.185 57.895 6.32 0.00 39.65 4.02
3270 3884 1.522092 CCGCTTATCAGGGTCAGCA 59.478 57.895 0.00 0.00 32.17 4.41
3315 3929 1.546476 GTCGTGTCAAGATCCTCCAGT 59.454 52.381 0.00 0.00 0.00 4.00
3342 3956 4.833495 TCCGGGATCATGCCCCCA 62.833 66.667 18.44 4.72 45.84 4.96
3345 3959 2.113986 CCTTCCGGGATCATGCCC 59.886 66.667 0.00 0.00 45.10 5.36
3428 4042 2.053865 CCCCATCACAATGCCGCTT 61.054 57.895 0.00 0.00 0.00 4.68
3432 4046 0.685458 AGAAGCCCCATCACAATGCC 60.685 55.000 0.00 0.00 0.00 4.40
3433 4047 0.458669 CAGAAGCCCCATCACAATGC 59.541 55.000 0.00 0.00 0.00 3.56
3438 4052 1.134907 CATTTGCAGAAGCCCCATCAC 60.135 52.381 0.00 0.00 41.13 3.06
3465 4079 5.163561 ACACCACCACACATTTCAAAACTAG 60.164 40.000 0.00 0.00 0.00 2.57
3483 4097 4.694037 GGATGGAGTAGTAAACAACACCAC 59.306 45.833 0.00 0.00 0.00 4.16
3484 4098 4.561938 CGGATGGAGTAGTAAACAACACCA 60.562 45.833 0.00 0.00 0.00 4.17
3490 4104 4.460948 GGAACGGATGGAGTAGTAAACA 57.539 45.455 0.00 0.00 0.00 2.83
3510 4124 2.507339 AACCACAACAAGCATTTCGG 57.493 45.000 0.00 0.00 0.00 4.30
3512 4126 6.902224 AACTAAAACCACAACAAGCATTTC 57.098 33.333 0.00 0.00 0.00 2.17
3552 4166 4.891168 CCCTAAACTAAAACCACAACAGGT 59.109 41.667 0.00 0.00 45.91 4.00
3553 4167 5.134661 TCCCTAAACTAAAACCACAACAGG 58.865 41.667 0.00 0.00 0.00 4.00
3554 4168 5.826208 ACTCCCTAAACTAAAACCACAACAG 59.174 40.000 0.00 0.00 0.00 3.16
3555 4169 5.757988 ACTCCCTAAACTAAAACCACAACA 58.242 37.500 0.00 0.00 0.00 3.33
3556 4170 6.073602 CGTACTCCCTAAACTAAAACCACAAC 60.074 42.308 0.00 0.00 0.00 3.32
3557 4171 5.990996 CGTACTCCCTAAACTAAAACCACAA 59.009 40.000 0.00 0.00 0.00 3.33
3558 4172 5.304101 TCGTACTCCCTAAACTAAAACCACA 59.696 40.000 0.00 0.00 0.00 4.17
3577 4191 5.406477 ACTTTCGAGGGTTGTAAATTCGTAC 59.594 40.000 0.00 0.00 31.85 3.67
3580 4194 5.049954 TCAACTTTCGAGGGTTGTAAATTCG 60.050 40.000 22.61 5.00 42.15 3.34
3596 4210 8.964476 TTATCCATCTGTATTCCTCAACTTTC 57.036 34.615 0.00 0.00 0.00 2.62
3597 4211 9.927081 AATTATCCATCTGTATTCCTCAACTTT 57.073 29.630 0.00 0.00 0.00 2.66
3600 4214 8.571336 CCAAATTATCCATCTGTATTCCTCAAC 58.429 37.037 0.00 0.00 0.00 3.18
3601 4215 7.231317 GCCAAATTATCCATCTGTATTCCTCAA 59.769 37.037 0.00 0.00 0.00 3.02
3603 4217 6.716628 TGCCAAATTATCCATCTGTATTCCTC 59.283 38.462 0.00 0.00 0.00 3.71
3642 4257 8.475331 AAATTATAAGAGAACGGGTATATGCG 57.525 34.615 0.00 0.00 0.00 4.73
3656 4271 7.775561 ACTACCCAGGAGCAAAAATTATAAGAG 59.224 37.037 0.00 0.00 0.00 2.85
3704 4319 1.824230 GGTCAAGCCAATGCAATGGTA 59.176 47.619 21.75 3.20 42.75 3.25
3739 4354 2.819608 TGTCTTTGTTGCAGATAAGGGC 59.180 45.455 0.00 0.00 0.00 5.19
3741 4356 3.745975 TCGTGTCTTTGTTGCAGATAAGG 59.254 43.478 0.00 0.00 0.00 2.69
3744 4359 4.025229 GTGTTCGTGTCTTTGTTGCAGATA 60.025 41.667 0.00 0.00 0.00 1.98
3751 4366 3.749088 TCTGTTGTGTTCGTGTCTTTGTT 59.251 39.130 0.00 0.00 0.00 2.83
3817 4433 5.189736 ACTCAGATCAATTTAGGTAGGTGCA 59.810 40.000 0.00 0.00 0.00 4.57
3830 4446 7.563188 AGAACATGGAGTACTACTCAGATCAAT 59.437 37.037 16.49 0.00 46.79 2.57
3914 4530 5.163972 CCAAATCATTGCACAATTACCGTTG 60.164 40.000 0.00 0.00 35.10 4.10
3949 4565 3.578716 TGACCCTCGTTCTCTCTCAAAAT 59.421 43.478 0.00 0.00 0.00 1.82
3955 4571 2.296073 AACTGACCCTCGTTCTCTCT 57.704 50.000 0.00 0.00 0.00 3.10
3956 4572 4.425520 CATAAACTGACCCTCGTTCTCTC 58.574 47.826 0.00 0.00 0.00 3.20
3957 4573 3.195825 CCATAAACTGACCCTCGTTCTCT 59.804 47.826 0.00 0.00 0.00 3.10
3958 4574 3.056035 ACCATAAACTGACCCTCGTTCTC 60.056 47.826 0.00 0.00 0.00 2.87
3963 4579 3.188460 CACAAACCATAAACTGACCCTCG 59.812 47.826 0.00 0.00 0.00 4.63
4039 4657 4.151689 TCAGAATAACTGCAGTGCGTTTAC 59.848 41.667 22.49 16.56 45.38 2.01
4201 4822 7.988937 AGCATGGGAGGATTTAATGAACTATA 58.011 34.615 0.00 0.00 0.00 1.31
4202 4823 6.856757 AGCATGGGAGGATTTAATGAACTAT 58.143 36.000 0.00 0.00 0.00 2.12
4203 4824 6.266131 AGCATGGGAGGATTTAATGAACTA 57.734 37.500 0.00 0.00 0.00 2.24
4204 4825 5.134725 AGCATGGGAGGATTTAATGAACT 57.865 39.130 0.00 0.00 0.00 3.01
4205 4826 4.279420 GGAGCATGGGAGGATTTAATGAAC 59.721 45.833 0.00 0.00 0.00 3.18
4206 4827 4.473444 GGAGCATGGGAGGATTTAATGAA 58.527 43.478 0.00 0.00 0.00 2.57
4207 4828 3.181429 GGGAGCATGGGAGGATTTAATGA 60.181 47.826 0.00 0.00 0.00 2.57
4208 4829 3.160269 GGGAGCATGGGAGGATTTAATG 58.840 50.000 0.00 0.00 0.00 1.90
4209 4830 2.791179 TGGGAGCATGGGAGGATTTAAT 59.209 45.455 0.00 0.00 0.00 1.40
4210 4831 2.175499 CTGGGAGCATGGGAGGATTTAA 59.825 50.000 0.00 0.00 0.00 1.52
4211 4832 1.776667 CTGGGAGCATGGGAGGATTTA 59.223 52.381 0.00 0.00 0.00 1.40
4212 4833 0.554792 CTGGGAGCATGGGAGGATTT 59.445 55.000 0.00 0.00 0.00 2.17
4213 4834 2.004408 GCTGGGAGCATGGGAGGATT 62.004 60.000 0.00 0.00 41.89 3.01
4214 4835 2.459086 GCTGGGAGCATGGGAGGAT 61.459 63.158 0.00 0.00 41.89 3.24
4215 4836 3.092511 GCTGGGAGCATGGGAGGA 61.093 66.667 0.00 0.00 41.89 3.71
4216 4837 1.348008 TAAGCTGGGAGCATGGGAGG 61.348 60.000 0.00 0.00 45.56 4.30
4217 4838 0.548031 TTAAGCTGGGAGCATGGGAG 59.452 55.000 0.00 0.00 45.56 4.30
4218 4839 0.998928 TTTAAGCTGGGAGCATGGGA 59.001 50.000 0.00 0.00 45.56 4.37
4219 4840 1.851304 TTTTAAGCTGGGAGCATGGG 58.149 50.000 0.00 0.00 45.56 4.00
4262 4883 9.775854 TTGTATTGTGAACATCCATGAATTTTT 57.224 25.926 0.00 0.00 0.00 1.94
4263 4884 9.426837 CTTGTATTGTGAACATCCATGAATTTT 57.573 29.630 0.00 0.00 0.00 1.82
4264 4885 8.587608 ACTTGTATTGTGAACATCCATGAATTT 58.412 29.630 0.00 0.00 0.00 1.82
4265 4886 8.030692 CACTTGTATTGTGAACATCCATGAATT 58.969 33.333 0.00 0.00 37.60 2.17
4266 4887 7.177216 ACACTTGTATTGTGAACATCCATGAAT 59.823 33.333 0.00 0.00 38.65 2.57
4267 4888 6.489700 ACACTTGTATTGTGAACATCCATGAA 59.510 34.615 0.00 0.00 38.65 2.57
4268 4889 6.003326 ACACTTGTATTGTGAACATCCATGA 58.997 36.000 0.00 0.00 38.65 3.07
4269 4890 6.258230 ACACTTGTATTGTGAACATCCATG 57.742 37.500 0.00 0.00 38.65 3.66
4270 4891 6.899393 AACACTTGTATTGTGAACATCCAT 57.101 33.333 0.00 0.00 38.65 3.41
4271 4892 6.707440 AAACACTTGTATTGTGAACATCCA 57.293 33.333 0.00 0.00 38.65 3.41
4272 4893 7.644490 TGTAAACACTTGTATTGTGAACATCC 58.356 34.615 0.00 0.00 38.65 3.51
4307 4928 9.696917 GTGTATTTGAGTTTGGATCTGATTTTT 57.303 29.630 0.00 0.00 0.00 1.94
4308 4929 8.859090 TGTGTATTTGAGTTTGGATCTGATTTT 58.141 29.630 0.00 0.00 0.00 1.82
4309 4930 8.299570 GTGTGTATTTGAGTTTGGATCTGATTT 58.700 33.333 0.00 0.00 0.00 2.17
4310 4931 7.667219 AGTGTGTATTTGAGTTTGGATCTGATT 59.333 33.333 0.00 0.00 0.00 2.57
4311 4932 7.120285 CAGTGTGTATTTGAGTTTGGATCTGAT 59.880 37.037 0.00 0.00 0.00 2.90
4312 4933 6.427853 CAGTGTGTATTTGAGTTTGGATCTGA 59.572 38.462 0.00 0.00 0.00 3.27
4313 4934 6.427853 TCAGTGTGTATTTGAGTTTGGATCTG 59.572 38.462 0.00 0.00 0.00 2.90
4314 4935 6.533730 TCAGTGTGTATTTGAGTTTGGATCT 58.466 36.000 0.00 0.00 0.00 2.75
4315 4936 6.801539 TCAGTGTGTATTTGAGTTTGGATC 57.198 37.500 0.00 0.00 0.00 3.36
4316 4937 7.581213 TTTCAGTGTGTATTTGAGTTTGGAT 57.419 32.000 0.00 0.00 0.00 3.41
4317 4938 7.581213 ATTTCAGTGTGTATTTGAGTTTGGA 57.419 32.000 0.00 0.00 0.00 3.53
4318 4939 9.743057 TTTATTTCAGTGTGTATTTGAGTTTGG 57.257 29.630 0.00 0.00 0.00 3.28
4322 4943 9.965824 CCTTTTTATTTCAGTGTGTATTTGAGT 57.034 29.630 0.00 0.00 0.00 3.41
4324 4945 9.959749 GTCCTTTTTATTTCAGTGTGTATTTGA 57.040 29.630 0.00 0.00 0.00 2.69
4325 4946 9.743057 TGTCCTTTTTATTTCAGTGTGTATTTG 57.257 29.630 0.00 0.00 0.00 2.32
4329 4950 9.959749 GATTTGTCCTTTTTATTTCAGTGTGTA 57.040 29.630 0.00 0.00 0.00 2.90
4330 4951 7.926018 GGATTTGTCCTTTTTATTTCAGTGTGT 59.074 33.333 0.00 0.00 0.00 3.72
4331 4952 7.114811 CGGATTTGTCCTTTTTATTTCAGTGTG 59.885 37.037 0.00 0.00 0.00 3.82
4332 4953 7.145323 CGGATTTGTCCTTTTTATTTCAGTGT 58.855 34.615 0.00 0.00 0.00 3.55
4333 4954 7.145323 ACGGATTTGTCCTTTTTATTTCAGTG 58.855 34.615 0.00 0.00 0.00 3.66
4334 4955 7.013846 TGACGGATTTGTCCTTTTTATTTCAGT 59.986 33.333 0.00 0.00 38.11 3.41
4335 4956 7.367285 TGACGGATTTGTCCTTTTTATTTCAG 58.633 34.615 0.00 0.00 38.11 3.02
4336 4957 7.278461 TGACGGATTTGTCCTTTTTATTTCA 57.722 32.000 0.00 0.00 38.11 2.69
4337 4958 8.026607 TCATGACGGATTTGTCCTTTTTATTTC 58.973 33.333 0.00 0.00 38.11 2.17
4338 4959 7.891561 TCATGACGGATTTGTCCTTTTTATTT 58.108 30.769 0.00 0.00 38.11 1.40
4339 4960 7.461182 TCATGACGGATTTGTCCTTTTTATT 57.539 32.000 0.00 0.00 38.11 1.40
4340 4961 7.393234 TCTTCATGACGGATTTGTCCTTTTTAT 59.607 33.333 0.00 0.00 38.11 1.40
4341 4962 6.712998 TCTTCATGACGGATTTGTCCTTTTTA 59.287 34.615 0.00 0.00 38.11 1.52
4342 4963 5.534654 TCTTCATGACGGATTTGTCCTTTTT 59.465 36.000 0.00 0.00 38.11 1.94
4343 4964 5.070001 TCTTCATGACGGATTTGTCCTTTT 58.930 37.500 0.00 0.00 38.11 2.27
4344 4965 4.651778 TCTTCATGACGGATTTGTCCTTT 58.348 39.130 0.00 0.00 38.11 3.11
4345 4966 4.256920 CTCTTCATGACGGATTTGTCCTT 58.743 43.478 0.00 0.00 38.11 3.36
4346 4967 3.261897 ACTCTTCATGACGGATTTGTCCT 59.738 43.478 0.00 0.00 38.11 3.85
4347 4968 3.600388 ACTCTTCATGACGGATTTGTCC 58.400 45.455 0.00 0.00 38.11 4.02
4348 4969 6.042777 TGATACTCTTCATGACGGATTTGTC 58.957 40.000 0.00 0.00 39.37 3.18
4349 4970 5.977635 TGATACTCTTCATGACGGATTTGT 58.022 37.500 0.00 0.00 0.00 2.83
4350 4971 6.908870 TTGATACTCTTCATGACGGATTTG 57.091 37.500 0.00 0.00 0.00 2.32
4351 4972 7.824289 TCTTTTGATACTCTTCATGACGGATTT 59.176 33.333 0.00 0.00 0.00 2.17
4352 4973 7.331026 TCTTTTGATACTCTTCATGACGGATT 58.669 34.615 0.00 0.00 0.00 3.01
4353 4974 6.878317 TCTTTTGATACTCTTCATGACGGAT 58.122 36.000 0.00 0.00 0.00 4.18
4354 4975 6.280855 TCTTTTGATACTCTTCATGACGGA 57.719 37.500 0.00 0.00 0.00 4.69
4355 4976 6.813649 TCTTCTTTTGATACTCTTCATGACGG 59.186 38.462 0.00 0.00 0.00 4.79
4356 4977 7.329471 TGTCTTCTTTTGATACTCTTCATGACG 59.671 37.037 0.00 0.00 0.00 4.35
4357 4978 8.539770 TGTCTTCTTTTGATACTCTTCATGAC 57.460 34.615 0.00 0.00 0.00 3.06
4358 4979 9.559732 TTTGTCTTCTTTTGATACTCTTCATGA 57.440 29.630 0.00 0.00 0.00 3.07
4361 4982 9.396022 ACTTTTGTCTTCTTTTGATACTCTTCA 57.604 29.630 0.00 0.00 0.00 3.02
4362 4983 9.657121 CACTTTTGTCTTCTTTTGATACTCTTC 57.343 33.333 0.00 0.00 0.00 2.87
4363 4984 9.396022 TCACTTTTGTCTTCTTTTGATACTCTT 57.604 29.630 0.00 0.00 0.00 2.85
4364 4985 8.964476 TCACTTTTGTCTTCTTTTGATACTCT 57.036 30.769 0.00 0.00 0.00 3.24
4365 4986 9.657121 CTTCACTTTTGTCTTCTTTTGATACTC 57.343 33.333 0.00 0.00 0.00 2.59
4366 4987 9.396022 TCTTCACTTTTGTCTTCTTTTGATACT 57.604 29.630 0.00 0.00 0.00 2.12
4369 4990 8.139989 CCATCTTCACTTTTGTCTTCTTTTGAT 58.860 33.333 0.00 0.00 0.00 2.57
4370 4991 7.122650 ACCATCTTCACTTTTGTCTTCTTTTGA 59.877 33.333 0.00 0.00 0.00 2.69
4371 4992 7.260603 ACCATCTTCACTTTTGTCTTCTTTTG 58.739 34.615 0.00 0.00 0.00 2.44
4372 4993 7.410120 ACCATCTTCACTTTTGTCTTCTTTT 57.590 32.000 0.00 0.00 0.00 2.27
4373 4994 7.775561 ACTACCATCTTCACTTTTGTCTTCTTT 59.224 33.333 0.00 0.00 0.00 2.52
4374 4995 7.283329 ACTACCATCTTCACTTTTGTCTTCTT 58.717 34.615 0.00 0.00 0.00 2.52
4375 4996 6.831976 ACTACCATCTTCACTTTTGTCTTCT 58.168 36.000 0.00 0.00 0.00 2.85
4376 4997 8.779354 ATACTACCATCTTCACTTTTGTCTTC 57.221 34.615 0.00 0.00 0.00 2.87
4377 4998 9.220767 GAATACTACCATCTTCACTTTTGTCTT 57.779 33.333 0.00 0.00 0.00 3.01
4378 4999 8.375506 TGAATACTACCATCTTCACTTTTGTCT 58.624 33.333 0.00 0.00 0.00 3.41
4379 5000 8.443937 GTGAATACTACCATCTTCACTTTTGTC 58.556 37.037 6.95 0.00 42.53 3.18
4380 5001 7.936847 TGTGAATACTACCATCTTCACTTTTGT 59.063 33.333 13.49 0.00 44.84 2.83
4381 5002 8.322906 TGTGAATACTACCATCTTCACTTTTG 57.677 34.615 13.49 0.00 44.84 2.44
4382 5003 9.167311 GATGTGAATACTACCATCTTCACTTTT 57.833 33.333 13.49 1.90 44.84 2.27
4383 5004 8.543774 AGATGTGAATACTACCATCTTCACTTT 58.456 33.333 13.49 3.86 44.84 2.66
4384 5005 7.984050 CAGATGTGAATACTACCATCTTCACTT 59.016 37.037 13.49 8.51 44.84 3.16
4385 5006 7.418368 CCAGATGTGAATACTACCATCTTCACT 60.418 40.741 13.49 2.34 44.84 3.41
4386 5007 6.703607 CCAGATGTGAATACTACCATCTTCAC 59.296 42.308 7.20 7.20 41.47 3.18
4387 5008 6.611236 TCCAGATGTGAATACTACCATCTTCA 59.389 38.462 0.00 0.00 41.47 3.02
4388 5009 7.055667 TCCAGATGTGAATACTACCATCTTC 57.944 40.000 0.00 0.00 41.47 2.87
4389 5010 7.623999 ATCCAGATGTGAATACTACCATCTT 57.376 36.000 0.00 0.00 41.47 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.