Multiple sequence alignment - TraesCS2A01G429400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G429400 chr2A 100.000 4511 0 0 1 4511 682550841 682555351 0.000000e+00 8331.0
1 TraesCS2A01G429400 chr2A 84.298 605 67 15 3752 4342 136973825 136973235 2.360000e-157 566.0
2 TraesCS2A01G429400 chr2D 92.032 3928 248 36 598 4506 539258924 539262805 0.000000e+00 5459.0
3 TraesCS2A01G429400 chr2D 92.763 152 11 0 278 429 539258774 539258925 2.110000e-53 220.0
4 TraesCS2A01G429400 chr2B 95.844 3128 105 15 598 3718 643181510 643184619 0.000000e+00 5033.0
5 TraesCS2A01G429400 chr2B 92.128 813 46 9 3716 4511 643184733 643185544 0.000000e+00 1131.0
6 TraesCS2A01G429400 chr6D 84.181 708 84 15 3752 4443 81040343 81039648 0.000000e+00 662.0
7 TraesCS2A01G429400 chr4A 85.289 605 67 14 3752 4342 35188697 35188101 4.990000e-169 604.0
8 TraesCS2A01G429400 chr6B 85.149 505 63 6 3848 4342 246540776 246540274 1.450000e-139 507.0
9 TraesCS2A01G429400 chr6B 84.980 506 63 6 3848 4342 246390642 246390139 6.740000e-138 501.0
10 TraesCS2A01G429400 chr6B 84.980 506 63 11 3848 4342 246695717 246695214 6.740000e-138 501.0
11 TraesCS2A01G429400 chrUn 84.980 506 63 6 3848 4342 155289030 155288527 6.740000e-138 501.0
12 TraesCS2A01G429400 chr5B 100.000 32 0 0 498 529 202954111 202954080 4.870000e-05 60.2
13 TraesCS2A01G429400 chr1D 100.000 32 0 0 498 529 209737575 209737606 4.870000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G429400 chr2A 682550841 682555351 4510 False 8331.0 8331 100.0000 1 4511 1 chr2A.!!$F1 4510
1 TraesCS2A01G429400 chr2A 136973235 136973825 590 True 566.0 566 84.2980 3752 4342 1 chr2A.!!$R1 590
2 TraesCS2A01G429400 chr2D 539258774 539262805 4031 False 2839.5 5459 92.3975 278 4506 2 chr2D.!!$F1 4228
3 TraesCS2A01G429400 chr2B 643181510 643185544 4034 False 3082.0 5033 93.9860 598 4511 2 chr2B.!!$F1 3913
4 TraesCS2A01G429400 chr6D 81039648 81040343 695 True 662.0 662 84.1810 3752 4443 1 chr6D.!!$R1 691
5 TraesCS2A01G429400 chr4A 35188101 35188697 596 True 604.0 604 85.2890 3752 4342 1 chr4A.!!$R1 590
6 TraesCS2A01G429400 chr6B 246540274 246540776 502 True 507.0 507 85.1490 3848 4342 1 chr6B.!!$R2 494
7 TraesCS2A01G429400 chr6B 246390139 246390642 503 True 501.0 501 84.9800 3848 4342 1 chr6B.!!$R1 494
8 TraesCS2A01G429400 chr6B 246695214 246695717 503 True 501.0 501 84.9800 3848 4342 1 chr6B.!!$R3 494
9 TraesCS2A01G429400 chrUn 155288527 155289030 503 True 501.0 501 84.9800 3848 4342 1 chrUn.!!$R1 494

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
506 507 0.036306 CCGACCTACTTGGCTGGTTT 59.964 55.0 0.00 0.0 40.22 3.27 F
575 576 0.109319 GCCTGTAAAATGCCCGTGTG 60.109 55.0 0.00 0.0 0.00 3.82 F
824 827 0.112412 TCCAGCCCTCAGGAAAAACC 59.888 55.0 0.00 0.0 39.35 3.27 F
1435 1439 0.250513 ACTCCGAGACTTTGATGGCC 59.749 55.0 1.33 0.0 0.00 5.36 F
2057 2061 0.171903 CAATGTAGTTGCCCAGCTGC 59.828 55.0 8.66 0.0 0.00 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1367 1371 0.036388 GGACGCATTCTCCTTCACCA 60.036 55.000 0.00 0.0 0.00 4.17 R
1435 1439 0.179020 TTTGTGGACCAGACCAGCAG 60.179 55.000 0.00 0.0 40.85 4.24 R
1794 1798 0.741221 GGCTGCCTCGTAACAAGGAG 60.741 60.000 12.43 0.0 35.83 3.69 R
2503 2507 1.558756 CTCCTCCTGCATCCTCTTTGT 59.441 52.381 0.00 0.0 0.00 2.83 R
3880 4014 1.101331 GAAAGGCAAGGATGGAGCAG 58.899 55.000 0.00 0.0 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.274393 ATCGTTCGCTGCTACCATC 57.726 52.632 0.00 0.00 0.00 3.51
19 20 0.747255 ATCGTTCGCTGCTACCATCT 59.253 50.000 0.00 0.00 0.00 2.90
20 21 0.100682 TCGTTCGCTGCTACCATCTC 59.899 55.000 0.00 0.00 0.00 2.75
21 22 0.179137 CGTTCGCTGCTACCATCTCA 60.179 55.000 0.00 0.00 0.00 3.27
22 23 1.565305 GTTCGCTGCTACCATCTCAG 58.435 55.000 0.00 0.00 0.00 3.35
23 24 0.461548 TTCGCTGCTACCATCTCAGG 59.538 55.000 0.00 0.00 0.00 3.86
24 25 1.593750 CGCTGCTACCATCTCAGGC 60.594 63.158 0.00 0.00 0.00 4.85
25 26 1.828768 GCTGCTACCATCTCAGGCT 59.171 57.895 0.00 0.00 0.00 4.58
26 27 0.249826 GCTGCTACCATCTCAGGCTC 60.250 60.000 0.00 0.00 0.00 4.70
27 28 1.412079 CTGCTACCATCTCAGGCTCT 58.588 55.000 0.00 0.00 0.00 4.09
28 29 2.591923 CTGCTACCATCTCAGGCTCTA 58.408 52.381 0.00 0.00 0.00 2.43
29 30 2.961741 CTGCTACCATCTCAGGCTCTAA 59.038 50.000 0.00 0.00 0.00 2.10
30 31 3.577848 CTGCTACCATCTCAGGCTCTAAT 59.422 47.826 0.00 0.00 0.00 1.73
31 32 3.323115 TGCTACCATCTCAGGCTCTAATG 59.677 47.826 0.00 0.00 0.00 1.90
32 33 3.306641 GCTACCATCTCAGGCTCTAATGG 60.307 52.174 14.09 14.09 42.12 3.16
33 34 2.053244 ACCATCTCAGGCTCTAATGGG 58.947 52.381 17.99 5.18 40.97 4.00
34 35 1.271271 CCATCTCAGGCTCTAATGGGC 60.271 57.143 9.63 0.00 34.50 5.36
39 40 4.956932 GGCTCTAATGGGCCGGCC 62.957 72.222 38.57 38.57 38.91 6.13
49 50 2.203294 GGCCGGCCCGAATATTGT 60.203 61.111 36.64 0.00 0.00 2.71
50 51 2.551912 GGCCGGCCCGAATATTGTG 61.552 63.158 36.64 0.00 0.00 3.33
51 52 1.822186 GCCGGCCCGAATATTGTGT 60.822 57.895 18.11 0.00 0.00 3.72
52 53 2.021722 CCGGCCCGAATATTGTGTG 58.978 57.895 3.71 0.00 0.00 3.82
53 54 0.462937 CCGGCCCGAATATTGTGTGA 60.463 55.000 3.71 0.00 0.00 3.58
54 55 0.937304 CGGCCCGAATATTGTGTGAG 59.063 55.000 0.00 0.00 0.00 3.51
55 56 0.663153 GGCCCGAATATTGTGTGAGC 59.337 55.000 0.00 0.00 0.00 4.26
56 57 0.304705 GCCCGAATATTGTGTGAGCG 59.695 55.000 0.00 0.00 0.00 5.03
57 58 1.934589 CCCGAATATTGTGTGAGCGA 58.065 50.000 0.00 0.00 0.00 4.93
58 59 2.483876 CCCGAATATTGTGTGAGCGAT 58.516 47.619 0.00 0.00 0.00 4.58
59 60 2.476619 CCCGAATATTGTGTGAGCGATC 59.523 50.000 0.00 0.00 0.00 3.69
60 61 3.123050 CCGAATATTGTGTGAGCGATCA 58.877 45.455 0.00 0.00 0.00 2.92
61 62 3.555547 CCGAATATTGTGTGAGCGATCAA 59.444 43.478 4.22 0.00 0.00 2.57
62 63 4.508971 CGAATATTGTGTGAGCGATCAAC 58.491 43.478 4.22 6.98 0.00 3.18
63 64 4.032786 CGAATATTGTGTGAGCGATCAACA 59.967 41.667 4.22 9.67 0.00 3.33
64 65 5.445806 CGAATATTGTGTGAGCGATCAACAA 60.446 40.000 23.47 23.47 0.00 2.83
65 66 3.542712 ATTGTGTGAGCGATCAACAAC 57.457 42.857 23.62 15.74 0.00 3.32
66 67 1.225855 TGTGTGAGCGATCAACAACC 58.774 50.000 4.22 0.00 0.00 3.77
67 68 1.202639 TGTGTGAGCGATCAACAACCT 60.203 47.619 4.22 0.00 0.00 3.50
68 69 2.036604 TGTGTGAGCGATCAACAACCTA 59.963 45.455 4.22 0.00 0.00 3.08
69 70 2.668457 GTGTGAGCGATCAACAACCTAG 59.332 50.000 4.22 0.00 0.00 3.02
70 71 2.560981 TGTGAGCGATCAACAACCTAGA 59.439 45.455 4.22 0.00 0.00 2.43
71 72 2.924290 GTGAGCGATCAACAACCTAGAC 59.076 50.000 4.22 0.00 0.00 2.59
72 73 2.560981 TGAGCGATCAACAACCTAGACA 59.439 45.455 0.00 0.00 0.00 3.41
73 74 2.924290 GAGCGATCAACAACCTAGACAC 59.076 50.000 0.00 0.00 0.00 3.67
74 75 2.563179 AGCGATCAACAACCTAGACACT 59.437 45.455 0.00 0.00 0.00 3.55
75 76 3.762288 AGCGATCAACAACCTAGACACTA 59.238 43.478 0.00 0.00 0.00 2.74
76 77 4.219944 AGCGATCAACAACCTAGACACTAA 59.780 41.667 0.00 0.00 0.00 2.24
77 78 4.927425 GCGATCAACAACCTAGACACTAAA 59.073 41.667 0.00 0.00 0.00 1.85
78 79 5.163982 GCGATCAACAACCTAGACACTAAAC 60.164 44.000 0.00 0.00 0.00 2.01
79 80 6.157211 CGATCAACAACCTAGACACTAAACT 58.843 40.000 0.00 0.00 0.00 2.66
80 81 7.310664 CGATCAACAACCTAGACACTAAACTA 58.689 38.462 0.00 0.00 0.00 2.24
81 82 7.485277 CGATCAACAACCTAGACACTAAACTAG 59.515 40.741 0.00 0.00 36.73 2.57
82 83 7.828508 TCAACAACCTAGACACTAAACTAGA 57.171 36.000 0.00 0.00 38.53 2.43
83 84 7.883217 TCAACAACCTAGACACTAAACTAGAG 58.117 38.462 0.00 0.00 38.53 2.43
84 85 6.270156 ACAACCTAGACACTAAACTAGAGC 57.730 41.667 0.00 0.00 38.53 4.09
85 86 5.773680 ACAACCTAGACACTAAACTAGAGCA 59.226 40.000 0.00 0.00 38.53 4.26
86 87 6.071840 ACAACCTAGACACTAAACTAGAGCAG 60.072 42.308 0.00 0.00 38.53 4.24
87 88 4.951094 ACCTAGACACTAAACTAGAGCAGG 59.049 45.833 0.00 0.00 38.53 4.85
88 89 3.878160 AGACACTAAACTAGAGCAGGC 57.122 47.619 0.00 0.00 0.00 4.85
89 90 2.164624 AGACACTAAACTAGAGCAGGCG 59.835 50.000 0.00 0.00 0.00 5.52
90 91 1.281899 CACTAAACTAGAGCAGGCGC 58.718 55.000 0.00 0.00 38.99 6.53
91 92 0.179134 ACTAAACTAGAGCAGGCGCG 60.179 55.000 0.00 0.00 45.49 6.86
92 93 0.179134 CTAAACTAGAGCAGGCGCGT 60.179 55.000 8.43 0.00 45.49 6.01
93 94 0.179145 TAAACTAGAGCAGGCGCGTC 60.179 55.000 0.21 0.21 45.49 5.19
94 95 2.837371 AAACTAGAGCAGGCGCGTCC 62.837 60.000 7.31 9.59 45.49 4.79
95 96 3.826754 CTAGAGCAGGCGCGTCCA 61.827 66.667 19.30 0.00 45.49 4.02
96 97 4.129737 TAGAGCAGGCGCGTCCAC 62.130 66.667 19.30 7.37 45.49 4.02
101 102 4.435436 CAGGCGCGTCCACTGCTA 62.435 66.667 19.30 0.00 37.29 3.49
102 103 4.436998 AGGCGCGTCCACTGCTAC 62.437 66.667 19.30 0.00 37.29 3.58
103 104 4.735132 GGCGCGTCCACTGCTACA 62.735 66.667 8.43 0.00 34.01 2.74
104 105 2.736995 GCGCGTCCACTGCTACAA 60.737 61.111 8.43 0.00 0.00 2.41
105 106 2.314647 GCGCGTCCACTGCTACAAA 61.315 57.895 8.43 0.00 0.00 2.83
106 107 1.635663 GCGCGTCCACTGCTACAAAT 61.636 55.000 8.43 0.00 0.00 2.32
107 108 0.370273 CGCGTCCACTGCTACAAATC 59.630 55.000 0.00 0.00 0.00 2.17
108 109 0.727398 GCGTCCACTGCTACAAATCC 59.273 55.000 0.00 0.00 0.00 3.01
109 110 1.676014 GCGTCCACTGCTACAAATCCT 60.676 52.381 0.00 0.00 0.00 3.24
110 111 2.418197 GCGTCCACTGCTACAAATCCTA 60.418 50.000 0.00 0.00 0.00 2.94
111 112 3.187700 CGTCCACTGCTACAAATCCTAC 58.812 50.000 0.00 0.00 0.00 3.18
112 113 3.187700 GTCCACTGCTACAAATCCTACG 58.812 50.000 0.00 0.00 0.00 3.51
113 114 2.167693 TCCACTGCTACAAATCCTACGG 59.832 50.000 0.00 0.00 0.00 4.02
114 115 1.933853 CACTGCTACAAATCCTACGGC 59.066 52.381 0.00 0.00 0.00 5.68
115 116 1.209128 CTGCTACAAATCCTACGGCG 58.791 55.000 4.80 4.80 0.00 6.46
116 117 0.533491 TGCTACAAATCCTACGGCGT 59.467 50.000 19.64 19.64 0.00 5.68
117 118 1.750206 TGCTACAAATCCTACGGCGTA 59.250 47.619 19.80 19.80 0.00 4.42
118 119 2.122564 GCTACAAATCCTACGGCGTAC 58.877 52.381 16.97 0.00 0.00 3.67
119 120 2.735823 CTACAAATCCTACGGCGTACC 58.264 52.381 16.97 0.00 0.00 3.34
120 121 0.176449 ACAAATCCTACGGCGTACCC 59.824 55.000 16.97 0.00 0.00 3.69
121 122 0.462789 CAAATCCTACGGCGTACCCT 59.537 55.000 16.97 0.00 0.00 4.34
122 123 1.682854 CAAATCCTACGGCGTACCCTA 59.317 52.381 16.97 0.00 0.00 3.53
123 124 2.071778 AATCCTACGGCGTACCCTAA 57.928 50.000 16.97 0.00 0.00 2.69
124 125 2.071778 ATCCTACGGCGTACCCTAAA 57.928 50.000 16.97 0.00 0.00 1.85
125 126 1.846007 TCCTACGGCGTACCCTAAAA 58.154 50.000 16.97 0.00 0.00 1.52
126 127 2.175202 TCCTACGGCGTACCCTAAAAA 58.825 47.619 16.97 0.00 0.00 1.94
145 146 3.808466 AAATAGAGCTCTGCATCGTCA 57.192 42.857 26.78 3.50 0.00 4.35
146 147 3.367992 AATAGAGCTCTGCATCGTCAG 57.632 47.619 26.78 0.00 35.46 3.51
147 148 2.044123 TAGAGCTCTGCATCGTCAGA 57.956 50.000 26.78 0.00 40.50 3.27
148 149 1.401761 AGAGCTCTGCATCGTCAGAT 58.598 50.000 17.42 0.00 41.73 2.90
160 161 4.676546 CATCGTCAGATGCTCTAGAAACA 58.323 43.478 0.00 0.00 46.46 2.83
161 162 4.098055 TCGTCAGATGCTCTAGAAACAC 57.902 45.455 0.00 0.00 0.00 3.32
162 163 3.506067 TCGTCAGATGCTCTAGAAACACA 59.494 43.478 0.00 0.00 0.00 3.72
163 164 4.022329 TCGTCAGATGCTCTAGAAACACAA 60.022 41.667 0.00 0.00 0.00 3.33
164 165 4.325741 CGTCAGATGCTCTAGAAACACAAG 59.674 45.833 0.00 0.00 0.00 3.16
165 166 5.233988 GTCAGATGCTCTAGAAACACAAGT 58.766 41.667 0.00 0.00 0.00 3.16
166 167 6.390721 GTCAGATGCTCTAGAAACACAAGTA 58.609 40.000 0.00 0.00 0.00 2.24
167 168 7.038659 GTCAGATGCTCTAGAAACACAAGTAT 58.961 38.462 0.00 0.00 0.00 2.12
168 169 7.009999 GTCAGATGCTCTAGAAACACAAGTATG 59.990 40.741 0.00 0.00 0.00 2.39
169 170 7.038048 CAGATGCTCTAGAAACACAAGTATGA 58.962 38.462 0.00 0.00 0.00 2.15
170 171 7.547019 CAGATGCTCTAGAAACACAAGTATGAA 59.453 37.037 0.00 0.00 0.00 2.57
171 172 8.263640 AGATGCTCTAGAAACACAAGTATGAAT 58.736 33.333 0.00 0.00 0.00 2.57
172 173 7.601073 TGCTCTAGAAACACAAGTATGAATG 57.399 36.000 0.00 0.00 0.00 2.67
173 174 6.595326 TGCTCTAGAAACACAAGTATGAATGG 59.405 38.462 0.00 0.00 0.00 3.16
174 175 6.457528 GCTCTAGAAACACAAGTATGAATGGC 60.458 42.308 0.00 0.00 0.00 4.40
175 176 6.711277 TCTAGAAACACAAGTATGAATGGCT 58.289 36.000 0.00 0.00 0.00 4.75
176 177 7.847096 TCTAGAAACACAAGTATGAATGGCTA 58.153 34.615 0.00 0.00 0.00 3.93
177 178 6.992063 AGAAACACAAGTATGAATGGCTAG 57.008 37.500 0.00 0.00 0.00 3.42
178 179 6.711277 AGAAACACAAGTATGAATGGCTAGA 58.289 36.000 0.00 0.00 0.00 2.43
179 180 7.341805 AGAAACACAAGTATGAATGGCTAGAT 58.658 34.615 0.00 0.00 0.00 1.98
180 181 6.932356 AACACAAGTATGAATGGCTAGATG 57.068 37.500 0.00 0.00 0.00 2.90
181 182 5.371526 ACACAAGTATGAATGGCTAGATGG 58.628 41.667 0.00 0.00 0.00 3.51
182 183 5.130975 ACACAAGTATGAATGGCTAGATGGA 59.869 40.000 0.00 0.00 0.00 3.41
183 184 6.057533 CACAAGTATGAATGGCTAGATGGAA 58.942 40.000 0.00 0.00 0.00 3.53
184 185 6.543465 CACAAGTATGAATGGCTAGATGGAAA 59.457 38.462 0.00 0.00 0.00 3.13
185 186 6.543831 ACAAGTATGAATGGCTAGATGGAAAC 59.456 38.462 0.00 0.00 0.00 2.78
186 187 5.300752 AGTATGAATGGCTAGATGGAAACG 58.699 41.667 0.00 0.00 0.00 3.60
187 188 3.627395 TGAATGGCTAGATGGAAACGT 57.373 42.857 0.00 0.00 0.00 3.99
195 196 1.702299 GATGGAAACGTCGTCTGCG 59.298 57.895 0.00 0.00 36.46 5.18
196 197 1.006571 ATGGAAACGTCGTCTGCGT 60.007 52.632 0.00 0.00 45.07 5.24
197 198 1.282248 ATGGAAACGTCGTCTGCGTG 61.282 55.000 0.00 0.00 42.10 5.34
198 199 1.947642 GGAAACGTCGTCTGCGTGT 60.948 57.895 0.00 0.00 42.10 4.49
199 200 1.481683 GAAACGTCGTCTGCGTGTC 59.518 57.895 0.00 0.00 42.10 3.67
200 201 2.182505 GAAACGTCGTCTGCGTGTCG 62.183 60.000 0.00 0.00 42.10 4.35
201 202 2.924922 AAACGTCGTCTGCGTGTCGT 62.925 55.000 0.00 0.00 42.10 4.34
202 203 3.157523 CGTCGTCTGCGTGTCGTC 61.158 66.667 0.00 0.00 39.49 4.20
203 204 2.251667 GTCGTCTGCGTGTCGTCT 59.748 61.111 0.00 0.00 39.49 4.18
204 205 1.494628 GTCGTCTGCGTGTCGTCTA 59.505 57.895 0.00 0.00 39.49 2.59
205 206 0.110509 GTCGTCTGCGTGTCGTCTAA 60.111 55.000 0.00 0.00 39.49 2.10
206 207 0.587768 TCGTCTGCGTGTCGTCTAAA 59.412 50.000 0.00 0.00 39.49 1.85
207 208 1.002576 TCGTCTGCGTGTCGTCTAAAA 60.003 47.619 0.00 0.00 39.49 1.52
208 209 1.382419 CGTCTGCGTGTCGTCTAAAAG 59.618 52.381 0.00 0.00 0.00 2.27
209 210 1.124477 GTCTGCGTGTCGTCTAAAAGC 59.876 52.381 0.00 0.00 0.00 3.51
210 211 1.000607 TCTGCGTGTCGTCTAAAAGCT 60.001 47.619 0.00 0.00 0.00 3.74
211 212 2.227149 TCTGCGTGTCGTCTAAAAGCTA 59.773 45.455 0.00 0.00 0.00 3.32
212 213 3.119602 TCTGCGTGTCGTCTAAAAGCTAT 60.120 43.478 0.00 0.00 0.00 2.97
213 214 3.176708 TGCGTGTCGTCTAAAAGCTATC 58.823 45.455 0.00 0.00 0.00 2.08
214 215 2.213575 GCGTGTCGTCTAAAAGCTATCG 59.786 50.000 0.00 0.00 0.00 2.92
215 216 2.782192 CGTGTCGTCTAAAAGCTATCGG 59.218 50.000 0.00 0.00 0.00 4.18
216 217 2.534757 GTGTCGTCTAAAAGCTATCGGC 59.465 50.000 0.00 0.00 42.19 5.54
231 232 5.512473 GCTATCGGCTGTATAGTGTATAGC 58.488 45.833 7.05 7.05 38.06 2.97
232 233 5.066117 GCTATCGGCTGTATAGTGTATAGCA 59.934 44.000 15.66 0.00 40.02 3.49
233 234 5.568685 ATCGGCTGTATAGTGTATAGCAG 57.431 43.478 15.66 12.27 36.15 4.24
234 235 4.395625 TCGGCTGTATAGTGTATAGCAGT 58.604 43.478 15.66 0.00 36.15 4.40
235 236 5.554070 TCGGCTGTATAGTGTATAGCAGTA 58.446 41.667 15.66 2.32 37.40 2.74
236 237 5.410746 TCGGCTGTATAGTGTATAGCAGTAC 59.589 44.000 15.66 0.27 35.98 2.73
237 238 5.411977 CGGCTGTATAGTGTATAGCAGTACT 59.588 44.000 15.66 0.00 35.98 2.73
238 239 6.402334 CGGCTGTATAGTGTATAGCAGTACTC 60.402 46.154 15.66 0.00 35.98 2.59
239 240 6.430308 GGCTGTATAGTGTATAGCAGTACTCA 59.570 42.308 15.66 0.00 35.98 3.41
240 241 7.040617 GGCTGTATAGTGTATAGCAGTACTCAA 60.041 40.741 15.66 0.00 35.98 3.02
241 242 8.350722 GCTGTATAGTGTATAGCAGTACTCAAA 58.649 37.037 10.19 0.00 35.98 2.69
263 264 5.499004 AAAAGACTAATCCCACAGCTACA 57.501 39.130 0.00 0.00 0.00 2.74
264 265 4.473477 AAGACTAATCCCACAGCTACAC 57.527 45.455 0.00 0.00 0.00 2.90
265 266 3.441101 AGACTAATCCCACAGCTACACA 58.559 45.455 0.00 0.00 0.00 3.72
266 267 3.449018 AGACTAATCCCACAGCTACACAG 59.551 47.826 0.00 0.00 0.00 3.66
267 268 2.501723 ACTAATCCCACAGCTACACAGG 59.498 50.000 0.00 0.00 0.00 4.00
268 269 1.362224 AATCCCACAGCTACACAGGT 58.638 50.000 0.00 0.00 0.00 4.00
293 294 8.915654 GTGAATGATGCTAAACTAAAACCAAAG 58.084 33.333 0.00 0.00 0.00 2.77
298 299 4.098196 TGCTAAACTAAAACCAAAGCCGTT 59.902 37.500 0.00 0.00 0.00 4.44
416 417 3.758554 GCTAGAATTTCCACTTTCAGGCA 59.241 43.478 0.00 0.00 0.00 4.75
423 424 2.980233 ACTTTCAGGCACGCAGGC 60.980 61.111 0.00 0.00 44.61 4.85
440 441 4.104143 CGATACGCAGGTCCCAAC 57.896 61.111 0.00 0.00 0.00 3.77
441 442 1.216977 CGATACGCAGGTCCCAACA 59.783 57.895 0.00 0.00 0.00 3.33
442 443 1.082117 CGATACGCAGGTCCCAACAC 61.082 60.000 0.00 0.00 0.00 3.32
443 444 0.036765 GATACGCAGGTCCCAACACA 60.037 55.000 0.00 0.00 0.00 3.72
444 445 0.398696 ATACGCAGGTCCCAACACAA 59.601 50.000 0.00 0.00 0.00 3.33
445 446 0.250124 TACGCAGGTCCCAACACAAG 60.250 55.000 0.00 0.00 0.00 3.16
446 447 2.908073 CGCAGGTCCCAACACAAGC 61.908 63.158 0.00 0.00 0.00 4.01
447 448 1.827789 GCAGGTCCCAACACAAGCA 60.828 57.895 0.00 0.00 0.00 3.91
448 449 1.391157 GCAGGTCCCAACACAAGCAA 61.391 55.000 0.00 0.00 0.00 3.91
449 450 1.331214 CAGGTCCCAACACAAGCAAT 58.669 50.000 0.00 0.00 0.00 3.56
450 451 1.000060 CAGGTCCCAACACAAGCAATG 60.000 52.381 0.00 0.00 0.00 2.82
451 452 0.319813 GGTCCCAACACAAGCAATGC 60.320 55.000 0.00 0.00 0.00 3.56
452 453 0.675633 GTCCCAACACAAGCAATGCT 59.324 50.000 0.00 0.00 42.56 3.79
453 454 1.885887 GTCCCAACACAAGCAATGCTA 59.114 47.619 8.68 0.00 38.25 3.49
454 455 2.493278 GTCCCAACACAAGCAATGCTAT 59.507 45.455 8.68 0.00 38.25 2.97
455 456 3.694072 GTCCCAACACAAGCAATGCTATA 59.306 43.478 8.68 0.00 38.25 1.31
456 457 3.694072 TCCCAACACAAGCAATGCTATAC 59.306 43.478 8.68 0.00 38.25 1.47
457 458 3.487376 CCCAACACAAGCAATGCTATACG 60.487 47.826 8.68 0.00 38.25 3.06
458 459 3.100817 CAACACAAGCAATGCTATACGC 58.899 45.455 8.68 0.00 38.25 4.42
477 478 0.937304 CACAGACTGTGTTTCACGGG 59.063 55.000 24.73 0.00 44.25 5.28
478 479 0.828022 ACAGACTGTGTTTCACGGGA 59.172 50.000 7.47 0.00 44.25 5.14
479 480 1.416401 ACAGACTGTGTTTCACGGGAT 59.584 47.619 7.47 0.00 44.25 3.85
480 481 2.069273 CAGACTGTGTTTCACGGGATC 58.931 52.381 12.37 3.30 44.25 3.36
481 482 1.691976 AGACTGTGTTTCACGGGATCA 59.308 47.619 12.37 0.00 44.25 2.92
482 483 2.104111 AGACTGTGTTTCACGGGATCAA 59.896 45.455 12.37 0.00 44.25 2.57
483 484 2.218603 ACTGTGTTTCACGGGATCAAC 58.781 47.619 12.37 0.00 44.25 3.18
484 485 1.194547 CTGTGTTTCACGGGATCAACG 59.805 52.381 7.40 7.40 37.12 4.10
485 486 0.515564 GTGTTTCACGGGATCAACGG 59.484 55.000 12.69 3.48 35.23 4.44
486 487 0.393448 TGTTTCACGGGATCAACGGA 59.607 50.000 12.69 5.42 35.23 4.69
487 488 0.794473 GTTTCACGGGATCAACGGAC 59.206 55.000 12.69 3.71 35.23 4.79
488 489 0.320946 TTTCACGGGATCAACGGACC 60.321 55.000 12.69 0.00 35.23 4.46
492 493 2.186125 GGGATCAACGGACCGACC 59.814 66.667 23.38 14.31 0.00 4.79
493 494 2.356780 GGGATCAACGGACCGACCT 61.357 63.158 23.38 0.95 36.31 3.85
494 495 1.039233 GGGATCAACGGACCGACCTA 61.039 60.000 23.38 3.01 36.31 3.08
495 496 0.101939 GGATCAACGGACCGACCTAC 59.898 60.000 23.38 8.61 36.31 3.18
496 497 1.101331 GATCAACGGACCGACCTACT 58.899 55.000 23.38 0.00 36.31 2.57
497 498 1.475682 GATCAACGGACCGACCTACTT 59.524 52.381 23.38 0.00 36.31 2.24
498 499 0.599558 TCAACGGACCGACCTACTTG 59.400 55.000 23.38 13.43 36.31 3.16
499 500 0.389426 CAACGGACCGACCTACTTGG 60.389 60.000 23.38 0.00 42.93 3.61
500 501 2.163601 AACGGACCGACCTACTTGGC 62.164 60.000 23.38 0.00 40.22 4.52
501 502 2.348888 CGGACCGACCTACTTGGCT 61.349 63.158 8.64 0.00 40.22 4.75
502 503 1.218316 GGACCGACCTACTTGGCTG 59.782 63.158 0.00 0.00 40.22 4.85
503 504 1.218316 GACCGACCTACTTGGCTGG 59.782 63.158 0.00 0.00 40.22 4.85
504 505 1.535687 ACCGACCTACTTGGCTGGT 60.536 57.895 0.00 0.00 40.52 4.00
505 506 1.125711 ACCGACCTACTTGGCTGGTT 61.126 55.000 0.00 0.00 42.02 3.67
506 507 0.036306 CCGACCTACTTGGCTGGTTT 59.964 55.000 0.00 0.00 40.22 3.27
507 508 1.544759 CCGACCTACTTGGCTGGTTTT 60.545 52.381 0.00 0.00 40.22 2.43
508 509 1.535462 CGACCTACTTGGCTGGTTTTG 59.465 52.381 0.00 0.00 40.22 2.44
509 510 2.808933 CGACCTACTTGGCTGGTTTTGA 60.809 50.000 0.00 0.00 40.22 2.69
510 511 3.421844 GACCTACTTGGCTGGTTTTGAT 58.578 45.455 0.00 0.00 40.22 2.57
511 512 3.826729 GACCTACTTGGCTGGTTTTGATT 59.173 43.478 0.00 0.00 40.22 2.57
512 513 3.573967 ACCTACTTGGCTGGTTTTGATTG 59.426 43.478 0.00 0.00 40.22 2.67
513 514 3.056607 CCTACTTGGCTGGTTTTGATTGG 60.057 47.826 0.00 0.00 0.00 3.16
514 515 2.676748 ACTTGGCTGGTTTTGATTGGA 58.323 42.857 0.00 0.00 0.00 3.53
515 516 3.242011 ACTTGGCTGGTTTTGATTGGAT 58.758 40.909 0.00 0.00 0.00 3.41
516 517 3.007182 ACTTGGCTGGTTTTGATTGGATG 59.993 43.478 0.00 0.00 0.00 3.51
517 518 1.901159 TGGCTGGTTTTGATTGGATGG 59.099 47.619 0.00 0.00 0.00 3.51
518 519 2.178580 GGCTGGTTTTGATTGGATGGA 58.821 47.619 0.00 0.00 0.00 3.41
519 520 2.566724 GGCTGGTTTTGATTGGATGGAA 59.433 45.455 0.00 0.00 0.00 3.53
520 521 3.198417 GGCTGGTTTTGATTGGATGGAAT 59.802 43.478 0.00 0.00 0.00 3.01
521 522 4.323715 GGCTGGTTTTGATTGGATGGAATT 60.324 41.667 0.00 0.00 0.00 2.17
522 523 5.104982 GGCTGGTTTTGATTGGATGGAATTA 60.105 40.000 0.00 0.00 0.00 1.40
523 524 6.405538 GCTGGTTTTGATTGGATGGAATTAA 58.594 36.000 0.00 0.00 0.00 1.40
524 525 6.878389 GCTGGTTTTGATTGGATGGAATTAAA 59.122 34.615 0.00 0.00 0.00 1.52
525 526 7.064966 GCTGGTTTTGATTGGATGGAATTAAAG 59.935 37.037 0.00 0.00 0.00 1.85
526 527 7.972301 TGGTTTTGATTGGATGGAATTAAAGT 58.028 30.769 0.00 0.00 0.00 2.66
527 528 7.877097 TGGTTTTGATTGGATGGAATTAAAGTG 59.123 33.333 0.00 0.00 0.00 3.16
528 529 8.093927 GGTTTTGATTGGATGGAATTAAAGTGA 58.906 33.333 0.00 0.00 0.00 3.41
529 530 9.487790 GTTTTGATTGGATGGAATTAAAGTGAA 57.512 29.630 0.00 0.00 0.00 3.18
530 531 9.709495 TTTTGATTGGATGGAATTAAAGTGAAG 57.291 29.630 0.00 0.00 0.00 3.02
531 532 8.648698 TTGATTGGATGGAATTAAAGTGAAGA 57.351 30.769 0.00 0.00 0.00 2.87
532 533 8.827832 TGATTGGATGGAATTAAAGTGAAGAT 57.172 30.769 0.00 0.00 0.00 2.40
533 534 9.258629 TGATTGGATGGAATTAAAGTGAAGATT 57.741 29.630 0.00 0.00 0.00 2.40
536 537 9.753674 TTGGATGGAATTAAAGTGAAGATTAGT 57.246 29.630 0.00 0.00 0.00 2.24
537 538 9.753674 TGGATGGAATTAAAGTGAAGATTAGTT 57.246 29.630 0.00 0.00 0.00 2.24
556 557 5.262588 AGTTTGAAAACTGCCTGTAAAGG 57.737 39.130 7.62 0.00 46.80 3.11
557 558 4.441495 AGTTTGAAAACTGCCTGTAAAGGC 60.441 41.667 17.89 17.89 46.80 4.35
558 559 7.414489 AGTTTGAAAACTGCCTGTAAAGGCC 62.414 44.000 21.74 5.08 46.80 5.19
568 569 4.110036 CCTGTAAAGGCCTGTAAAATGC 57.890 45.455 5.69 0.00 0.00 3.56
569 570 3.119137 CCTGTAAAGGCCTGTAAAATGCC 60.119 47.826 5.69 0.00 45.70 4.40
570 571 2.829120 TGTAAAGGCCTGTAAAATGCCC 59.171 45.455 5.69 0.00 46.55 5.36
571 572 0.894835 AAAGGCCTGTAAAATGCCCG 59.105 50.000 5.69 0.00 46.55 6.13
572 573 0.251608 AAGGCCTGTAAAATGCCCGT 60.252 50.000 5.69 0.00 46.55 5.28
573 574 0.965363 AGGCCTGTAAAATGCCCGTG 60.965 55.000 3.11 0.00 46.55 4.94
574 575 1.248101 GGCCTGTAAAATGCCCGTGT 61.248 55.000 0.00 0.00 39.30 4.49
575 576 0.109319 GCCTGTAAAATGCCCGTGTG 60.109 55.000 0.00 0.00 0.00 3.82
576 577 1.243902 CCTGTAAAATGCCCGTGTGT 58.756 50.000 0.00 0.00 0.00 3.72
577 578 1.611491 CCTGTAAAATGCCCGTGTGTT 59.389 47.619 0.00 0.00 0.00 3.32
578 579 2.035321 CCTGTAAAATGCCCGTGTGTTT 59.965 45.455 0.00 0.00 0.00 2.83
579 580 3.253677 CCTGTAAAATGCCCGTGTGTTTA 59.746 43.478 0.00 0.00 0.00 2.01
580 581 4.472286 CTGTAAAATGCCCGTGTGTTTAG 58.528 43.478 0.00 0.00 0.00 1.85
581 582 4.135306 TGTAAAATGCCCGTGTGTTTAGA 58.865 39.130 0.00 0.00 0.00 2.10
582 583 4.579340 TGTAAAATGCCCGTGTGTTTAGAA 59.421 37.500 0.00 0.00 0.00 2.10
583 584 4.864704 AAAATGCCCGTGTGTTTAGAAT 57.135 36.364 0.00 0.00 0.00 2.40
584 585 4.864704 AAATGCCCGTGTGTTTAGAATT 57.135 36.364 0.00 0.00 0.00 2.17
585 586 4.864704 AATGCCCGTGTGTTTAGAATTT 57.135 36.364 0.00 0.00 0.00 1.82
586 587 4.864704 ATGCCCGTGTGTTTAGAATTTT 57.135 36.364 0.00 0.00 0.00 1.82
587 588 4.231718 TGCCCGTGTGTTTAGAATTTTC 57.768 40.909 0.00 0.00 0.00 2.29
588 589 3.231160 GCCCGTGTGTTTAGAATTTTCG 58.769 45.455 0.00 0.00 0.00 3.46
589 590 3.817238 CCCGTGTGTTTAGAATTTTCGG 58.183 45.455 0.00 0.00 36.00 4.30
590 591 3.251487 CCCGTGTGTTTAGAATTTTCGGT 59.749 43.478 0.00 0.00 34.70 4.69
591 592 4.460505 CCGTGTGTTTAGAATTTTCGGTC 58.539 43.478 0.00 0.00 0.00 4.79
592 593 4.460505 CGTGTGTTTAGAATTTTCGGTCC 58.539 43.478 0.00 0.00 0.00 4.46
593 594 4.612033 CGTGTGTTTAGAATTTTCGGTCCC 60.612 45.833 0.00 0.00 0.00 4.46
594 595 4.276431 GTGTGTTTAGAATTTTCGGTCCCA 59.724 41.667 0.00 0.00 0.00 4.37
595 596 4.888239 TGTGTTTAGAATTTTCGGTCCCAA 59.112 37.500 0.00 0.00 0.00 4.12
596 597 5.217393 GTGTTTAGAATTTTCGGTCCCAAC 58.783 41.667 0.00 0.00 0.00 3.77
645 646 2.028476 TGGACCGTGGAGTACTTGAATG 60.028 50.000 0.00 0.00 0.00 2.67
665 666 4.036567 TGGAAGTATACCAATGACGACG 57.963 45.455 0.00 0.00 34.25 5.12
666 667 3.695556 TGGAAGTATACCAATGACGACGA 59.304 43.478 0.00 0.00 34.25 4.20
667 668 4.040376 GGAAGTATACCAATGACGACGAC 58.960 47.826 0.00 0.00 0.00 4.34
668 669 4.439153 GGAAGTATACCAATGACGACGACA 60.439 45.833 0.00 0.88 0.00 4.35
672 673 0.944311 ACCAATGACGACGACACTGC 60.944 55.000 0.00 0.00 0.00 4.40
674 675 0.436150 CAATGACGACGACACTGCTG 59.564 55.000 0.00 0.00 0.00 4.41
675 676 0.667487 AATGACGACGACACTGCTGG 60.667 55.000 0.00 0.00 0.00 4.85
693 694 1.514657 GTATACGTGCGTGCGACCA 60.515 57.895 7.55 0.00 35.59 4.02
705 706 3.767230 CGACCAACTCGCTGCGTG 61.767 66.667 22.48 21.62 35.06 5.34
706 707 4.077188 GACCAACTCGCTGCGTGC 62.077 66.667 22.48 2.50 38.57 5.34
722 723 4.549516 GCGTCGGCGAGGGAGTAC 62.550 72.222 28.02 9.71 41.33 2.73
750 751 1.267574 TGACCCTCCATGAGTGCTCC 61.268 60.000 0.00 0.00 0.00 4.70
761 762 1.676678 GAGTGCTCCGCATGACCCTA 61.677 60.000 0.00 0.00 41.91 3.53
824 827 0.112412 TCCAGCCCTCAGGAAAAACC 59.888 55.000 0.00 0.00 39.35 3.27
825 828 0.900182 CCAGCCCTCAGGAAAAACCC 60.900 60.000 0.00 0.00 40.05 4.11
845 848 6.341408 ACCCCAACTGTCCAATTCTATAAT 57.659 37.500 0.00 0.00 0.00 1.28
935 939 1.548357 CCCTCAGGTCACCTCCACAG 61.548 65.000 0.00 0.00 0.00 3.66
968 972 4.555511 GCTCAGACCAAAAGATCACACAAC 60.556 45.833 0.00 0.00 0.00 3.32
995 999 3.423539 TCCAAGAACTCACAATCCAGG 57.576 47.619 0.00 0.00 0.00 4.45
998 1002 3.341823 CAAGAACTCACAATCCAGGAGG 58.658 50.000 0.00 0.00 32.98 4.30
1149 1153 0.819259 CCACCATCCCCTACAATGCG 60.819 60.000 0.00 0.00 0.00 4.73
1435 1439 0.250513 ACTCCGAGACTTTGATGGCC 59.749 55.000 1.33 0.00 0.00 5.36
1436 1440 0.539051 CTCCGAGACTTTGATGGCCT 59.461 55.000 3.32 0.00 0.00 5.19
1463 1467 1.408340 CTGGTCCACAAACACATTGCA 59.592 47.619 0.00 0.00 43.13 4.08
1605 1609 1.223211 GAGGCAAGGGAAGAGGCTC 59.777 63.158 6.34 6.34 45.61 4.70
1692 1696 1.523095 GCTTTCGTCGATGCAGATACC 59.477 52.381 13.56 0.00 0.00 2.73
1701 1705 2.044806 ATGCAGATACCCCGCAGTCC 62.045 60.000 0.00 0.00 39.39 3.85
1715 1719 4.382685 CCCGCAGTCCTACTATCAGAAAAA 60.383 45.833 0.00 0.00 0.00 1.94
1752 1756 5.860182 CGATGCAGTTGTTCAATCAAAGATT 59.140 36.000 0.00 0.00 0.00 2.40
1781 1785 4.914983 TCCTCTGATGAAGCAAAGAATGT 58.085 39.130 0.00 0.00 0.00 2.71
1794 1798 2.604046 AGAATGTCACCGCCTACATC 57.396 50.000 0.00 0.00 35.30 3.06
1835 1839 3.156293 TCTCAGCATTTGCCAGCTTAAA 58.844 40.909 0.00 0.00 43.38 1.52
2013 2017 2.224744 TGCATATCCAACAGTGTGTGGT 60.225 45.455 18.20 11.48 0.00 4.16
2057 2061 0.171903 CAATGTAGTTGCCCAGCTGC 59.828 55.000 8.66 0.00 0.00 5.25
2079 2083 4.142381 GCAAGTTCTGGAGACACACTTTTT 60.142 41.667 0.00 0.00 36.88 1.94
2094 2098 3.438087 CACTTTTTCGTCAGCTGGATGAT 59.562 43.478 15.13 0.00 41.10 2.45
2136 2140 0.251297 CCCCAGCAACTCCATTGTCA 60.251 55.000 0.00 0.00 40.77 3.58
2319 2323 4.038642 GGTTCTTGTTACCTGATGCCAAAA 59.961 41.667 0.00 0.00 32.75 2.44
2320 2324 4.846779 TCTTGTTACCTGATGCCAAAAC 57.153 40.909 0.00 0.00 0.00 2.43
2404 2408 0.249398 GCAGATGTTACCTCCACCGT 59.751 55.000 0.00 0.00 0.00 4.83
2486 2490 1.406898 CATCTGCGTGCTCCTTCTCTA 59.593 52.381 0.00 0.00 0.00 2.43
2503 2507 6.603201 CCTTCTCTACATCAAAAGGGCAATAA 59.397 38.462 0.00 0.00 34.19 1.40
2517 2521 3.181483 GGGCAATAACAAAGAGGATGCAG 60.181 47.826 0.00 0.00 34.14 4.41
2667 2671 5.343307 AACTTGGAACTGTCAAAATTGCT 57.657 34.783 0.00 0.00 0.00 3.91
2875 2879 4.136796 TCAAAGTGATTCACTCAGTTGGG 58.863 43.478 19.23 5.21 44.98 4.12
3249 3253 6.601741 CTACTGCAGGAGAAAATCAAGATC 57.398 41.667 22.41 0.00 0.00 2.75
3252 3256 3.274288 GCAGGAGAAAATCAAGATCGGT 58.726 45.455 0.00 0.00 0.00 4.69
3399 3403 2.232452 ACAGGTCGTGAAGATCTTGGAG 59.768 50.000 14.00 3.55 38.52 3.86
3547 3551 5.373981 TGTAGGAAAGAACGAGACTCTTC 57.626 43.478 0.03 4.07 31.85 2.87
3651 3656 9.730705 TTTTTCTTGACTCTTGACTCATATCAT 57.269 29.630 0.00 0.00 0.00 2.45
3704 3709 6.626302 AGTTTGATTTTCCGTTCTGTTTTCA 58.374 32.000 0.00 0.00 0.00 2.69
3749 3870 8.928844 ATTTCGTTGTTAACTTTAGTGAATCG 57.071 30.769 7.22 0.00 0.00 3.34
3855 3989 9.825972 CTCGAAGCAAATTTCTTAGTATTTTCA 57.174 29.630 0.00 0.00 0.00 2.69
3856 3990 9.825972 TCGAAGCAAATTTCTTAGTATTTTCAG 57.174 29.630 0.00 0.00 0.00 3.02
3880 4014 6.868339 AGGTTCGACATCAATTTTTCCATTTC 59.132 34.615 0.00 0.00 0.00 2.17
3885 4019 6.034256 CGACATCAATTTTTCCATTTCTGCTC 59.966 38.462 0.00 0.00 0.00 4.26
3947 4085 4.390603 CCTTCAACAATCAATTGCACATGG 59.609 41.667 0.00 0.00 41.38 3.66
4003 4148 8.485578 AATAAACTATGGAAAAGGACCACAAA 57.514 30.769 0.00 0.00 40.36 2.83
4122 4268 2.647802 CCCCTTCCTAAACCCTCTTTGA 59.352 50.000 0.00 0.00 0.00 2.69
4202 4352 5.724328 TCTCATCAAAGAGACACCACATAC 58.276 41.667 0.00 0.00 39.62 2.39
4219 4369 5.446607 CCACATACGAACATCAAAACGCATA 60.447 40.000 0.00 0.00 0.00 3.14
4295 4445 8.650143 AGAAATAGGTTAGCCATCTTTTCAAA 57.350 30.769 0.00 0.00 37.19 2.69
4297 4447 9.875691 GAAATAGGTTAGCCATCTTTTCAAAAT 57.124 29.630 0.00 0.00 37.19 1.82
4366 4516 7.778470 AAAGCACTAATAGAGAACACATAGC 57.222 36.000 0.00 0.00 0.00 2.97
4402 4557 4.147321 AGCAGTTTTGGTGAAGACATCAT 58.853 39.130 0.00 0.00 40.97 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.747255 AGATGGTAGCAGCGAACGAT 59.253 50.000 4.28 0.00 0.00 3.73
1 2 0.100682 GAGATGGTAGCAGCGAACGA 59.899 55.000 4.28 0.00 0.00 3.85
2 3 0.179137 TGAGATGGTAGCAGCGAACG 60.179 55.000 4.28 0.00 0.00 3.95
3 4 1.565305 CTGAGATGGTAGCAGCGAAC 58.435 55.000 4.28 1.75 0.00 3.95
4 5 0.461548 CCTGAGATGGTAGCAGCGAA 59.538 55.000 4.28 0.00 0.00 4.70
5 6 2.021068 GCCTGAGATGGTAGCAGCGA 62.021 60.000 4.28 0.00 0.00 4.93
6 7 1.593750 GCCTGAGATGGTAGCAGCG 60.594 63.158 4.28 0.00 0.00 5.18
7 8 0.249826 GAGCCTGAGATGGTAGCAGC 60.250 60.000 0.98 0.98 0.00 5.25
8 9 1.412079 AGAGCCTGAGATGGTAGCAG 58.588 55.000 0.00 0.00 0.00 4.24
9 10 2.755952 TAGAGCCTGAGATGGTAGCA 57.244 50.000 0.00 0.00 0.00 3.49
10 11 3.306641 CCATTAGAGCCTGAGATGGTAGC 60.307 52.174 0.00 0.00 34.06 3.58
11 12 3.260380 CCCATTAGAGCCTGAGATGGTAG 59.740 52.174 0.00 0.00 36.39 3.18
12 13 3.242867 CCCATTAGAGCCTGAGATGGTA 58.757 50.000 0.00 0.00 36.39 3.25
13 14 2.053244 CCCATTAGAGCCTGAGATGGT 58.947 52.381 0.00 0.00 36.39 3.55
14 15 1.271271 GCCCATTAGAGCCTGAGATGG 60.271 57.143 0.00 0.00 37.57 3.51
15 16 1.271271 GGCCCATTAGAGCCTGAGATG 60.271 57.143 0.00 0.00 46.14 2.90
16 17 1.063183 GGCCCATTAGAGCCTGAGAT 58.937 55.000 0.00 0.00 46.14 2.75
17 18 2.532854 GGCCCATTAGAGCCTGAGA 58.467 57.895 0.00 0.00 46.14 3.27
22 23 4.956932 GGCCGGCCCATTAGAGCC 62.957 72.222 36.64 5.01 46.17 4.70
32 33 2.203294 ACAATATTCGGGCCGGCC 60.203 61.111 38.57 38.57 0.00 6.13
33 34 1.822186 ACACAATATTCGGGCCGGC 60.822 57.895 27.98 21.18 0.00 6.13
34 35 0.462937 TCACACAATATTCGGGCCGG 60.463 55.000 27.98 11.36 0.00 6.13
35 36 0.937304 CTCACACAATATTCGGGCCG 59.063 55.000 22.51 22.51 0.00 6.13
36 37 0.663153 GCTCACACAATATTCGGGCC 59.337 55.000 0.00 0.00 0.00 5.80
37 38 0.304705 CGCTCACACAATATTCGGGC 59.695 55.000 0.00 0.00 0.00 6.13
38 39 1.934589 TCGCTCACACAATATTCGGG 58.065 50.000 0.00 0.00 0.00 5.14
39 40 3.123050 TGATCGCTCACACAATATTCGG 58.877 45.455 0.00 0.00 0.00 4.30
40 41 4.032786 TGTTGATCGCTCACACAATATTCG 59.967 41.667 0.00 0.00 0.00 3.34
41 42 5.469373 TGTTGATCGCTCACACAATATTC 57.531 39.130 0.00 0.00 0.00 1.75
42 43 5.391950 GGTTGTTGATCGCTCACACAATATT 60.392 40.000 15.10 0.00 36.13 1.28
43 44 4.094887 GGTTGTTGATCGCTCACACAATAT 59.905 41.667 15.10 0.00 36.13 1.28
44 45 3.435327 GGTTGTTGATCGCTCACACAATA 59.565 43.478 15.10 0.00 36.13 1.90
45 46 2.226437 GGTTGTTGATCGCTCACACAAT 59.774 45.455 15.10 0.00 36.13 2.71
46 47 1.601903 GGTTGTTGATCGCTCACACAA 59.398 47.619 10.72 10.72 33.73 3.33
47 48 1.202639 AGGTTGTTGATCGCTCACACA 60.203 47.619 0.00 0.00 0.00 3.72
48 49 1.512926 AGGTTGTTGATCGCTCACAC 58.487 50.000 0.00 0.00 0.00 3.82
49 50 2.560981 TCTAGGTTGTTGATCGCTCACA 59.439 45.455 0.00 0.00 0.00 3.58
50 51 2.924290 GTCTAGGTTGTTGATCGCTCAC 59.076 50.000 0.00 0.00 0.00 3.51
51 52 2.560981 TGTCTAGGTTGTTGATCGCTCA 59.439 45.455 0.00 0.00 0.00 4.26
52 53 2.924290 GTGTCTAGGTTGTTGATCGCTC 59.076 50.000 0.00 0.00 0.00 5.03
53 54 2.563179 AGTGTCTAGGTTGTTGATCGCT 59.437 45.455 0.00 0.00 0.00 4.93
54 55 2.960819 AGTGTCTAGGTTGTTGATCGC 58.039 47.619 0.00 0.00 0.00 4.58
55 56 6.157211 AGTTTAGTGTCTAGGTTGTTGATCG 58.843 40.000 0.00 0.00 0.00 3.69
56 57 8.521176 TCTAGTTTAGTGTCTAGGTTGTTGATC 58.479 37.037 0.00 0.00 35.65 2.92
57 58 8.418597 TCTAGTTTAGTGTCTAGGTTGTTGAT 57.581 34.615 0.00 0.00 35.65 2.57
58 59 7.523380 GCTCTAGTTTAGTGTCTAGGTTGTTGA 60.523 40.741 0.00 0.00 35.65 3.18
59 60 6.586844 GCTCTAGTTTAGTGTCTAGGTTGTTG 59.413 42.308 0.00 0.00 35.65 3.33
60 61 6.267014 TGCTCTAGTTTAGTGTCTAGGTTGTT 59.733 38.462 0.00 0.00 35.65 2.83
61 62 5.773680 TGCTCTAGTTTAGTGTCTAGGTTGT 59.226 40.000 0.00 0.00 35.65 3.32
62 63 6.268825 TGCTCTAGTTTAGTGTCTAGGTTG 57.731 41.667 0.00 0.00 35.65 3.77
63 64 5.419471 CCTGCTCTAGTTTAGTGTCTAGGTT 59.581 44.000 0.00 0.00 35.65 3.50
64 65 4.951094 CCTGCTCTAGTTTAGTGTCTAGGT 59.049 45.833 0.00 0.00 35.65 3.08
65 66 4.202070 GCCTGCTCTAGTTTAGTGTCTAGG 60.202 50.000 0.00 0.00 35.65 3.02
66 67 4.496673 CGCCTGCTCTAGTTTAGTGTCTAG 60.497 50.000 0.00 0.00 36.10 2.43
67 68 3.377485 CGCCTGCTCTAGTTTAGTGTCTA 59.623 47.826 0.00 0.00 0.00 2.59
68 69 2.164624 CGCCTGCTCTAGTTTAGTGTCT 59.835 50.000 0.00 0.00 0.00 3.41
69 70 2.531206 CGCCTGCTCTAGTTTAGTGTC 58.469 52.381 0.00 0.00 0.00 3.67
70 71 1.404315 GCGCCTGCTCTAGTTTAGTGT 60.404 52.381 0.00 0.00 38.39 3.55
71 72 1.281899 GCGCCTGCTCTAGTTTAGTG 58.718 55.000 0.00 0.00 38.39 2.74
72 73 0.179134 CGCGCCTGCTCTAGTTTAGT 60.179 55.000 0.00 0.00 39.65 2.24
73 74 0.179134 ACGCGCCTGCTCTAGTTTAG 60.179 55.000 5.73 0.00 39.65 1.85
74 75 0.179145 GACGCGCCTGCTCTAGTTTA 60.179 55.000 5.73 0.00 39.65 2.01
75 76 1.446272 GACGCGCCTGCTCTAGTTT 60.446 57.895 5.73 0.00 39.65 2.66
76 77 2.182030 GACGCGCCTGCTCTAGTT 59.818 61.111 5.73 0.00 39.65 2.24
77 78 3.827898 GGACGCGCCTGCTCTAGT 61.828 66.667 5.73 0.00 39.65 2.57
78 79 3.826754 TGGACGCGCCTGCTCTAG 61.827 66.667 18.14 0.00 39.65 2.43
79 80 4.129737 GTGGACGCGCCTGCTCTA 62.130 66.667 18.14 0.00 39.65 2.43
84 85 4.435436 TAGCAGTGGACGCGCCTG 62.435 66.667 18.14 14.16 37.63 4.85
85 86 4.436998 GTAGCAGTGGACGCGCCT 62.437 66.667 18.14 0.00 37.63 5.52
86 87 4.735132 TGTAGCAGTGGACGCGCC 62.735 66.667 5.73 9.63 37.10 6.53
87 88 1.635663 ATTTGTAGCAGTGGACGCGC 61.636 55.000 5.73 0.00 0.00 6.86
88 89 0.370273 GATTTGTAGCAGTGGACGCG 59.630 55.000 3.53 3.53 0.00 6.01
89 90 0.727398 GGATTTGTAGCAGTGGACGC 59.273 55.000 0.00 0.00 0.00 5.19
90 91 2.386661 AGGATTTGTAGCAGTGGACG 57.613 50.000 0.00 0.00 0.00 4.79
91 92 3.187700 CGTAGGATTTGTAGCAGTGGAC 58.812 50.000 0.00 0.00 0.00 4.02
92 93 3.520290 CGTAGGATTTGTAGCAGTGGA 57.480 47.619 0.00 0.00 0.00 4.02
123 124 4.507710 TGACGATGCAGAGCTCTATTTTT 58.492 39.130 17.75 0.00 0.00 1.94
124 125 4.118410 CTGACGATGCAGAGCTCTATTTT 58.882 43.478 17.75 1.32 38.14 1.82
125 126 3.382865 TCTGACGATGCAGAGCTCTATTT 59.617 43.478 17.75 3.33 39.84 1.40
126 127 2.954989 TCTGACGATGCAGAGCTCTATT 59.045 45.455 17.75 3.74 39.84 1.73
127 128 2.580962 TCTGACGATGCAGAGCTCTAT 58.419 47.619 17.75 7.40 39.84 1.98
128 129 2.044123 TCTGACGATGCAGAGCTCTA 57.956 50.000 17.75 1.39 39.84 2.43
129 130 2.879372 TCTGACGATGCAGAGCTCT 58.121 52.632 11.45 11.45 39.84 4.09
146 147 7.834068 TTCATACTTGTGTTTCTAGAGCATC 57.166 36.000 0.00 0.00 0.00 3.91
147 148 7.281774 CCATTCATACTTGTGTTTCTAGAGCAT 59.718 37.037 0.00 0.00 0.00 3.79
148 149 6.595326 CCATTCATACTTGTGTTTCTAGAGCA 59.405 38.462 0.00 0.00 0.00 4.26
149 150 6.457528 GCCATTCATACTTGTGTTTCTAGAGC 60.458 42.308 0.00 0.00 0.00 4.09
150 151 6.820656 AGCCATTCATACTTGTGTTTCTAGAG 59.179 38.462 0.00 0.00 0.00 2.43
151 152 6.711277 AGCCATTCATACTTGTGTTTCTAGA 58.289 36.000 0.00 0.00 0.00 2.43
152 153 6.992063 AGCCATTCATACTTGTGTTTCTAG 57.008 37.500 0.00 0.00 0.00 2.43
153 154 7.847096 TCTAGCCATTCATACTTGTGTTTCTA 58.153 34.615 0.00 0.00 0.00 2.10
154 155 6.711277 TCTAGCCATTCATACTTGTGTTTCT 58.289 36.000 0.00 0.00 0.00 2.52
155 156 6.985188 TCTAGCCATTCATACTTGTGTTTC 57.015 37.500 0.00 0.00 0.00 2.78
156 157 6.319658 CCATCTAGCCATTCATACTTGTGTTT 59.680 38.462 0.00 0.00 0.00 2.83
157 158 5.824624 CCATCTAGCCATTCATACTTGTGTT 59.175 40.000 0.00 0.00 0.00 3.32
158 159 5.130975 TCCATCTAGCCATTCATACTTGTGT 59.869 40.000 0.00 0.00 0.00 3.72
159 160 5.614308 TCCATCTAGCCATTCATACTTGTG 58.386 41.667 0.00 0.00 0.00 3.33
160 161 5.894298 TCCATCTAGCCATTCATACTTGT 57.106 39.130 0.00 0.00 0.00 3.16
161 162 6.293081 CGTTTCCATCTAGCCATTCATACTTG 60.293 42.308 0.00 0.00 0.00 3.16
162 163 5.760253 CGTTTCCATCTAGCCATTCATACTT 59.240 40.000 0.00 0.00 0.00 2.24
163 164 5.163301 ACGTTTCCATCTAGCCATTCATACT 60.163 40.000 0.00 0.00 0.00 2.12
164 165 5.057149 ACGTTTCCATCTAGCCATTCATAC 58.943 41.667 0.00 0.00 0.00 2.39
165 166 5.290493 ACGTTTCCATCTAGCCATTCATA 57.710 39.130 0.00 0.00 0.00 2.15
166 167 4.130118 GACGTTTCCATCTAGCCATTCAT 58.870 43.478 0.00 0.00 0.00 2.57
167 168 3.531538 GACGTTTCCATCTAGCCATTCA 58.468 45.455 0.00 0.00 0.00 2.57
168 169 2.540101 CGACGTTTCCATCTAGCCATTC 59.460 50.000 0.00 0.00 0.00 2.67
169 170 2.093658 ACGACGTTTCCATCTAGCCATT 60.094 45.455 0.00 0.00 0.00 3.16
170 171 1.480954 ACGACGTTTCCATCTAGCCAT 59.519 47.619 0.00 0.00 0.00 4.40
171 172 0.892755 ACGACGTTTCCATCTAGCCA 59.107 50.000 0.00 0.00 0.00 4.75
172 173 1.134560 AGACGACGTTTCCATCTAGCC 59.865 52.381 0.13 0.00 0.00 3.93
173 174 2.186076 CAGACGACGTTTCCATCTAGC 58.814 52.381 0.13 0.00 0.00 3.42
174 175 2.186076 GCAGACGACGTTTCCATCTAG 58.814 52.381 0.13 0.00 0.00 2.43
175 176 1.466866 CGCAGACGACGTTTCCATCTA 60.467 52.381 0.13 0.00 43.93 1.98
176 177 0.732880 CGCAGACGACGTTTCCATCT 60.733 55.000 0.13 0.00 43.93 2.90
177 178 1.007336 ACGCAGACGACGTTTCCATC 61.007 55.000 0.13 0.00 41.93 3.51
178 179 1.006571 ACGCAGACGACGTTTCCAT 60.007 52.632 0.13 0.00 41.93 3.41
179 180 1.947146 CACGCAGACGACGTTTCCA 60.947 57.895 0.13 0.00 42.96 3.53
180 181 1.873355 GACACGCAGACGACGTTTCC 61.873 60.000 0.13 0.00 42.96 3.13
181 182 1.481683 GACACGCAGACGACGTTTC 59.518 57.895 0.13 0.00 42.96 2.78
182 183 2.290789 CGACACGCAGACGACGTTT 61.291 57.895 0.13 0.00 42.96 3.60
183 184 2.724721 CGACACGCAGACGACGTT 60.725 61.111 0.13 0.00 42.96 3.99
184 185 3.851796 GACGACACGCAGACGACGT 62.852 63.158 0.00 0.00 46.42 4.34
185 186 2.219209 TAGACGACACGCAGACGACG 62.219 60.000 7.25 0.00 43.93 5.12
186 187 0.110509 TTAGACGACACGCAGACGAC 60.111 55.000 7.25 1.84 43.93 4.34
187 188 0.587768 TTTAGACGACACGCAGACGA 59.412 50.000 7.25 0.00 43.93 4.20
189 190 1.124477 GCTTTTAGACGACACGCAGAC 59.876 52.381 0.00 0.00 0.00 3.51
190 191 1.000607 AGCTTTTAGACGACACGCAGA 60.001 47.619 0.00 0.00 0.00 4.26
191 192 1.419374 AGCTTTTAGACGACACGCAG 58.581 50.000 0.00 0.00 0.00 5.18
192 193 2.710220 TAGCTTTTAGACGACACGCA 57.290 45.000 0.00 0.00 0.00 5.24
193 194 2.213575 CGATAGCTTTTAGACGACACGC 59.786 50.000 0.00 0.00 0.00 5.34
194 195 2.782192 CCGATAGCTTTTAGACGACACG 59.218 50.000 0.00 0.00 0.00 4.49
195 196 2.534757 GCCGATAGCTTTTAGACGACAC 59.465 50.000 0.00 0.00 38.99 3.67
196 197 2.805845 GCCGATAGCTTTTAGACGACA 58.194 47.619 0.00 0.00 38.99 4.35
208 209 5.066117 TGCTATACACTATACAGCCGATAGC 59.934 44.000 0.00 0.00 40.47 2.97
209 210 6.316640 ACTGCTATACACTATACAGCCGATAG 59.683 42.308 0.00 0.00 33.78 2.08
210 211 6.178324 ACTGCTATACACTATACAGCCGATA 58.822 40.000 0.00 0.00 0.00 2.92
211 212 5.010933 ACTGCTATACACTATACAGCCGAT 58.989 41.667 0.00 0.00 0.00 4.18
212 213 4.395625 ACTGCTATACACTATACAGCCGA 58.604 43.478 0.00 0.00 0.00 5.54
213 214 4.768130 ACTGCTATACACTATACAGCCG 57.232 45.455 0.00 0.00 0.00 5.52
214 215 6.430308 TGAGTACTGCTATACACTATACAGCC 59.570 42.308 0.00 0.00 0.00 4.85
215 216 7.436430 TGAGTACTGCTATACACTATACAGC 57.564 40.000 0.00 0.00 0.00 4.40
240 241 5.705905 GTGTAGCTGTGGGATTAGTCTTTTT 59.294 40.000 0.00 0.00 0.00 1.94
241 242 5.221843 TGTGTAGCTGTGGGATTAGTCTTTT 60.222 40.000 0.00 0.00 0.00 2.27
242 243 4.286032 TGTGTAGCTGTGGGATTAGTCTTT 59.714 41.667 0.00 0.00 0.00 2.52
243 244 3.838317 TGTGTAGCTGTGGGATTAGTCTT 59.162 43.478 0.00 0.00 0.00 3.01
244 245 3.441101 TGTGTAGCTGTGGGATTAGTCT 58.559 45.455 0.00 0.00 0.00 3.24
245 246 3.430929 CCTGTGTAGCTGTGGGATTAGTC 60.431 52.174 0.00 0.00 0.00 2.59
246 247 2.501723 CCTGTGTAGCTGTGGGATTAGT 59.498 50.000 0.00 0.00 0.00 2.24
247 248 2.501723 ACCTGTGTAGCTGTGGGATTAG 59.498 50.000 0.00 0.00 0.00 1.73
248 249 2.236146 CACCTGTGTAGCTGTGGGATTA 59.764 50.000 0.00 0.00 0.00 1.75
249 250 1.003580 CACCTGTGTAGCTGTGGGATT 59.996 52.381 0.00 0.00 0.00 3.01
250 251 0.615331 CACCTGTGTAGCTGTGGGAT 59.385 55.000 0.00 0.00 0.00 3.85
251 252 0.471022 TCACCTGTGTAGCTGTGGGA 60.471 55.000 0.00 0.00 0.00 4.37
252 253 0.396435 TTCACCTGTGTAGCTGTGGG 59.604 55.000 0.00 0.00 0.00 4.61
253 254 2.079158 CATTCACCTGTGTAGCTGTGG 58.921 52.381 0.00 0.00 0.00 4.17
254 255 3.044235 TCATTCACCTGTGTAGCTGTG 57.956 47.619 0.00 0.00 0.00 3.66
255 256 3.603532 CATCATTCACCTGTGTAGCTGT 58.396 45.455 0.00 0.00 0.00 4.40
256 257 2.353889 GCATCATTCACCTGTGTAGCTG 59.646 50.000 0.00 0.00 0.00 4.24
257 258 2.238144 AGCATCATTCACCTGTGTAGCT 59.762 45.455 0.00 0.00 0.00 3.32
258 259 2.636830 AGCATCATTCACCTGTGTAGC 58.363 47.619 0.00 0.00 0.00 3.58
259 260 5.877012 AGTTTAGCATCATTCACCTGTGTAG 59.123 40.000 0.00 0.00 0.00 2.74
260 261 5.804639 AGTTTAGCATCATTCACCTGTGTA 58.195 37.500 0.00 0.00 0.00 2.90
261 262 4.655963 AGTTTAGCATCATTCACCTGTGT 58.344 39.130 0.00 0.00 0.00 3.72
262 263 6.741992 TTAGTTTAGCATCATTCACCTGTG 57.258 37.500 0.00 0.00 0.00 3.66
263 264 7.309194 GGTTTTAGTTTAGCATCATTCACCTGT 60.309 37.037 0.00 0.00 0.00 4.00
264 265 7.029563 GGTTTTAGTTTAGCATCATTCACCTG 58.970 38.462 0.00 0.00 0.00 4.00
265 266 6.719370 TGGTTTTAGTTTAGCATCATTCACCT 59.281 34.615 0.00 0.00 0.00 4.00
266 267 6.919721 TGGTTTTAGTTTAGCATCATTCACC 58.080 36.000 0.00 0.00 0.00 4.02
267 268 8.810652 TTTGGTTTTAGTTTAGCATCATTCAC 57.189 30.769 0.00 0.00 0.00 3.18
268 269 7.598493 GCTTTGGTTTTAGTTTAGCATCATTCA 59.402 33.333 0.00 0.00 0.00 2.57
269 270 7.063426 GGCTTTGGTTTTAGTTTAGCATCATTC 59.937 37.037 0.00 0.00 0.00 2.67
270 271 6.873605 GGCTTTGGTTTTAGTTTAGCATCATT 59.126 34.615 0.00 0.00 0.00 2.57
271 272 6.398095 GGCTTTGGTTTTAGTTTAGCATCAT 58.602 36.000 0.00 0.00 0.00 2.45
272 273 5.563867 CGGCTTTGGTTTTAGTTTAGCATCA 60.564 40.000 0.00 0.00 0.00 3.07
273 274 4.857037 CGGCTTTGGTTTTAGTTTAGCATC 59.143 41.667 0.00 0.00 0.00 3.91
274 275 4.279922 ACGGCTTTGGTTTTAGTTTAGCAT 59.720 37.500 0.00 0.00 0.00 3.79
275 276 3.633065 ACGGCTTTGGTTTTAGTTTAGCA 59.367 39.130 0.00 0.00 0.00 3.49
276 277 4.233123 ACGGCTTTGGTTTTAGTTTAGC 57.767 40.909 0.00 0.00 0.00 3.09
298 299 1.133407 GGCTGTGAAACGTTTGTTGGA 59.867 47.619 20.10 0.00 42.39 3.53
313 314 1.273327 GGTTTGCTGCATAAAGGCTGT 59.727 47.619 1.84 0.00 35.44 4.40
364 365 1.794222 GTACCGGCACATCTGTTGC 59.206 57.895 0.00 0.00 0.00 4.17
366 367 0.889994 TACGTACCGGCACATCTGTT 59.110 50.000 0.00 0.00 0.00 3.16
368 369 0.870307 GCTACGTACCGGCACATCTG 60.870 60.000 0.00 0.00 0.00 2.90
394 395 3.758554 TGCCTGAAAGTGGAAATTCTAGC 59.241 43.478 0.00 0.00 0.00 3.42
401 402 0.749818 TGCGTGCCTGAAAGTGGAAA 60.750 50.000 0.00 0.00 0.00 3.13
404 405 2.620112 CCTGCGTGCCTGAAAGTGG 61.620 63.158 0.00 0.00 0.00 4.00
423 424 1.082117 GTGTTGGGACCTGCGTATCG 61.082 60.000 0.00 0.00 0.00 2.92
429 430 1.391157 TTGCTTGTGTTGGGACCTGC 61.391 55.000 0.00 0.00 0.00 4.85
430 431 1.000060 CATTGCTTGTGTTGGGACCTG 60.000 52.381 0.00 0.00 0.00 4.00
432 433 0.319813 GCATTGCTTGTGTTGGGACC 60.320 55.000 0.16 0.00 0.00 4.46
434 435 2.284754 TAGCATTGCTTGTGTTGGGA 57.715 45.000 17.71 0.00 40.44 4.37
435 436 3.487376 CGTATAGCATTGCTTGTGTTGGG 60.487 47.826 17.71 0.00 40.44 4.12
436 437 3.683989 CGTATAGCATTGCTTGTGTTGG 58.316 45.455 17.71 0.00 40.44 3.77
459 460 0.828022 TCCCGTGAAACACAGTCTGT 59.172 50.000 0.00 0.00 35.74 3.41
460 461 2.069273 GATCCCGTGAAACACAGTCTG 58.931 52.381 0.00 0.00 35.74 3.51
461 462 1.691976 TGATCCCGTGAAACACAGTCT 59.308 47.619 0.00 0.00 35.74 3.24
462 463 2.163818 TGATCCCGTGAAACACAGTC 57.836 50.000 0.00 0.00 35.74 3.51
463 464 2.218603 GTTGATCCCGTGAAACACAGT 58.781 47.619 0.00 0.00 35.74 3.55
464 465 1.194547 CGTTGATCCCGTGAAACACAG 59.805 52.381 0.00 0.00 35.74 3.66
465 466 1.222300 CGTTGATCCCGTGAAACACA 58.778 50.000 0.00 0.00 35.74 3.72
466 467 0.515564 CCGTTGATCCCGTGAAACAC 59.484 55.000 0.00 0.00 35.74 3.32
467 468 0.393448 TCCGTTGATCCCGTGAAACA 59.607 50.000 0.00 0.00 35.74 2.83
468 469 0.794473 GTCCGTTGATCCCGTGAAAC 59.206 55.000 0.00 0.00 0.00 2.78
469 470 0.320946 GGTCCGTTGATCCCGTGAAA 60.321 55.000 0.00 0.00 0.00 2.69
470 471 1.294138 GGTCCGTTGATCCCGTGAA 59.706 57.895 0.00 0.00 0.00 3.18
471 472 2.975536 GGTCCGTTGATCCCGTGA 59.024 61.111 0.00 0.00 0.00 4.35
472 473 2.508439 CGGTCCGTTGATCCCGTG 60.508 66.667 2.08 0.00 35.78 4.94
473 474 2.677524 TCGGTCCGTTGATCCCGT 60.678 61.111 11.88 0.00 41.17 5.28
474 475 2.202703 GTCGGTCCGTTGATCCCG 60.203 66.667 11.88 0.00 41.75 5.14
475 476 1.039233 TAGGTCGGTCCGTTGATCCC 61.039 60.000 11.88 3.29 41.99 3.85
476 477 0.101939 GTAGGTCGGTCCGTTGATCC 59.898 60.000 11.88 7.50 41.99 3.36
477 478 1.101331 AGTAGGTCGGTCCGTTGATC 58.899 55.000 11.88 1.10 41.99 2.92
478 479 1.203994 CAAGTAGGTCGGTCCGTTGAT 59.796 52.381 11.88 0.00 41.99 2.57
479 480 0.599558 CAAGTAGGTCGGTCCGTTGA 59.400 55.000 11.88 0.00 41.99 3.18
480 481 0.389426 CCAAGTAGGTCGGTCCGTTG 60.389 60.000 11.88 7.10 41.99 4.10
481 482 1.969862 CCAAGTAGGTCGGTCCGTT 59.030 57.895 11.88 1.08 41.99 4.44
482 483 2.643232 GCCAAGTAGGTCGGTCCGT 61.643 63.158 11.88 0.00 41.99 4.69
483 484 2.183555 GCCAAGTAGGTCGGTCCG 59.816 66.667 4.39 4.39 41.99 4.79
484 485 1.218316 CAGCCAAGTAGGTCGGTCC 59.782 63.158 0.00 0.00 40.61 4.46
485 486 1.218316 CCAGCCAAGTAGGTCGGTC 59.782 63.158 0.00 0.00 40.61 4.79
486 487 1.125711 AACCAGCCAAGTAGGTCGGT 61.126 55.000 0.00 0.00 43.40 4.69
487 488 0.036306 AAACCAGCCAAGTAGGTCGG 59.964 55.000 0.00 0.00 40.61 4.79
488 489 1.535462 CAAAACCAGCCAAGTAGGTCG 59.465 52.381 0.00 0.00 40.61 4.79
489 490 2.858745 TCAAAACCAGCCAAGTAGGTC 58.141 47.619 0.00 0.00 40.61 3.85
490 491 3.525800 ATCAAAACCAGCCAAGTAGGT 57.474 42.857 0.00 0.00 40.61 3.08
491 492 3.056607 CCAATCAAAACCAGCCAAGTAGG 60.057 47.826 0.00 0.00 41.84 3.18
492 493 3.826157 TCCAATCAAAACCAGCCAAGTAG 59.174 43.478 0.00 0.00 0.00 2.57
493 494 3.838565 TCCAATCAAAACCAGCCAAGTA 58.161 40.909 0.00 0.00 0.00 2.24
494 495 2.676748 TCCAATCAAAACCAGCCAAGT 58.323 42.857 0.00 0.00 0.00 3.16
495 496 3.592059 CATCCAATCAAAACCAGCCAAG 58.408 45.455 0.00 0.00 0.00 3.61
496 497 2.302445 CCATCCAATCAAAACCAGCCAA 59.698 45.455 0.00 0.00 0.00 4.52
497 498 1.901159 CCATCCAATCAAAACCAGCCA 59.099 47.619 0.00 0.00 0.00 4.75
498 499 2.178580 TCCATCCAATCAAAACCAGCC 58.821 47.619 0.00 0.00 0.00 4.85
499 500 3.959535 TTCCATCCAATCAAAACCAGC 57.040 42.857 0.00 0.00 0.00 4.85
500 501 8.096414 ACTTTAATTCCATCCAATCAAAACCAG 58.904 33.333 0.00 0.00 0.00 4.00
501 502 7.877097 CACTTTAATTCCATCCAATCAAAACCA 59.123 33.333 0.00 0.00 0.00 3.67
502 503 8.093927 TCACTTTAATTCCATCCAATCAAAACC 58.906 33.333 0.00 0.00 0.00 3.27
503 504 9.487790 TTCACTTTAATTCCATCCAATCAAAAC 57.512 29.630 0.00 0.00 0.00 2.43
504 505 9.709495 CTTCACTTTAATTCCATCCAATCAAAA 57.291 29.630 0.00 0.00 0.00 2.44
505 506 9.087871 TCTTCACTTTAATTCCATCCAATCAAA 57.912 29.630 0.00 0.00 0.00 2.69
506 507 8.648698 TCTTCACTTTAATTCCATCCAATCAA 57.351 30.769 0.00 0.00 0.00 2.57
507 508 8.827832 ATCTTCACTTTAATTCCATCCAATCA 57.172 30.769 0.00 0.00 0.00 2.57
510 511 9.753674 ACTAATCTTCACTTTAATTCCATCCAA 57.246 29.630 0.00 0.00 0.00 3.53
511 512 9.753674 AACTAATCTTCACTTTAATTCCATCCA 57.246 29.630 0.00 0.00 0.00 3.41
521 522 9.730420 GCAGTTTTCAAACTAATCTTCACTTTA 57.270 29.630 4.61 0.00 46.89 1.85
522 523 7.706607 GGCAGTTTTCAAACTAATCTTCACTTT 59.293 33.333 4.61 0.00 46.89 2.66
523 524 7.068716 AGGCAGTTTTCAAACTAATCTTCACTT 59.931 33.333 4.61 0.00 46.89 3.16
524 525 6.547510 AGGCAGTTTTCAAACTAATCTTCACT 59.452 34.615 4.61 0.00 46.89 3.41
525 526 6.638468 CAGGCAGTTTTCAAACTAATCTTCAC 59.362 38.462 4.61 0.00 46.89 3.18
526 527 6.321181 ACAGGCAGTTTTCAAACTAATCTTCA 59.679 34.615 4.61 0.00 46.89 3.02
527 528 6.739112 ACAGGCAGTTTTCAAACTAATCTTC 58.261 36.000 4.61 0.00 46.89 2.87
528 529 6.715347 ACAGGCAGTTTTCAAACTAATCTT 57.285 33.333 4.61 0.00 46.89 2.40
529 530 7.817418 TTACAGGCAGTTTTCAAACTAATCT 57.183 32.000 4.61 1.25 46.89 2.40
530 531 7.595130 CCTTTACAGGCAGTTTTCAAACTAATC 59.405 37.037 4.61 0.00 46.89 1.75
531 532 7.433680 CCTTTACAGGCAGTTTTCAAACTAAT 58.566 34.615 4.61 0.00 46.89 1.73
532 533 6.801575 CCTTTACAGGCAGTTTTCAAACTAA 58.198 36.000 4.61 0.00 46.89 2.24
533 534 6.385649 CCTTTACAGGCAGTTTTCAAACTA 57.614 37.500 4.61 0.00 46.89 2.24
547 548 3.119137 GGCATTTTACAGGCCTTTACAGG 60.119 47.826 0.00 0.00 44.32 4.00
548 549 3.119137 GGGCATTTTACAGGCCTTTACAG 60.119 47.826 0.00 0.00 46.87 2.74
549 550 2.829120 GGGCATTTTACAGGCCTTTACA 59.171 45.455 0.00 0.00 46.87 2.41
550 551 3.520290 GGGCATTTTACAGGCCTTTAC 57.480 47.619 0.00 0.00 46.87 2.01
555 556 1.248101 ACACGGGCATTTTACAGGCC 61.248 55.000 0.00 0.00 46.99 5.19
556 557 0.109319 CACACGGGCATTTTACAGGC 60.109 55.000 0.00 0.00 0.00 4.85
557 558 1.243902 ACACACGGGCATTTTACAGG 58.756 50.000 0.00 0.00 0.00 4.00
558 559 3.363341 AAACACACGGGCATTTTACAG 57.637 42.857 0.00 0.00 0.00 2.74
559 560 4.135306 TCTAAACACACGGGCATTTTACA 58.865 39.130 0.00 0.00 0.00 2.41
560 561 4.752661 TCTAAACACACGGGCATTTTAC 57.247 40.909 0.00 0.00 0.00 2.01
561 562 5.968528 ATTCTAAACACACGGGCATTTTA 57.031 34.783 0.00 0.00 0.00 1.52
562 563 4.864704 ATTCTAAACACACGGGCATTTT 57.135 36.364 0.00 0.00 0.00 1.82
563 564 4.864704 AATTCTAAACACACGGGCATTT 57.135 36.364 0.00 0.00 0.00 2.32
564 565 4.864704 AAATTCTAAACACACGGGCATT 57.135 36.364 0.00 0.00 0.00 3.56
565 566 4.614993 CGAAAATTCTAAACACACGGGCAT 60.615 41.667 0.00 0.00 0.00 4.40
566 567 3.304123 CGAAAATTCTAAACACACGGGCA 60.304 43.478 0.00 0.00 0.00 5.36
567 568 3.231160 CGAAAATTCTAAACACACGGGC 58.769 45.455 0.00 0.00 0.00 6.13
568 569 3.251487 ACCGAAAATTCTAAACACACGGG 59.749 43.478 0.00 0.00 41.68 5.28
569 570 4.460505 GACCGAAAATTCTAAACACACGG 58.539 43.478 0.00 0.00 42.78 4.94
570 571 4.460505 GGACCGAAAATTCTAAACACACG 58.539 43.478 0.00 0.00 0.00 4.49
571 572 4.276431 TGGGACCGAAAATTCTAAACACAC 59.724 41.667 0.00 0.00 0.00 3.82
572 573 4.462133 TGGGACCGAAAATTCTAAACACA 58.538 39.130 0.00 0.00 0.00 3.72
573 574 5.217393 GTTGGGACCGAAAATTCTAAACAC 58.783 41.667 0.00 0.00 0.00 3.32
574 575 4.888239 TGTTGGGACCGAAAATTCTAAACA 59.112 37.500 0.00 0.00 0.00 2.83
575 576 5.009310 AGTGTTGGGACCGAAAATTCTAAAC 59.991 40.000 0.00 0.00 0.00 2.01
576 577 5.009210 CAGTGTTGGGACCGAAAATTCTAAA 59.991 40.000 0.00 0.00 0.00 1.85
577 578 4.517453 CAGTGTTGGGACCGAAAATTCTAA 59.483 41.667 0.00 0.00 0.00 2.10
578 579 4.069304 CAGTGTTGGGACCGAAAATTCTA 58.931 43.478 0.00 0.00 0.00 2.10
579 580 2.884639 CAGTGTTGGGACCGAAAATTCT 59.115 45.455 0.00 0.00 0.00 2.40
580 581 2.882137 TCAGTGTTGGGACCGAAAATTC 59.118 45.455 0.00 0.00 0.00 2.17
581 582 2.621526 GTCAGTGTTGGGACCGAAAATT 59.378 45.455 0.00 0.00 0.00 1.82
582 583 2.227194 GTCAGTGTTGGGACCGAAAAT 58.773 47.619 0.00 0.00 0.00 1.82
583 584 1.670791 GTCAGTGTTGGGACCGAAAA 58.329 50.000 0.00 0.00 0.00 2.29
584 585 0.531090 CGTCAGTGTTGGGACCGAAA 60.531 55.000 0.00 0.00 0.00 3.46
585 586 1.068417 CGTCAGTGTTGGGACCGAA 59.932 57.895 0.00 0.00 0.00 4.30
586 587 2.732016 CGTCAGTGTTGGGACCGA 59.268 61.111 0.00 0.00 0.00 4.69
587 588 3.041940 GCGTCAGTGTTGGGACCG 61.042 66.667 0.00 0.00 0.00 4.79
588 589 0.036765 TATGCGTCAGTGTTGGGACC 60.037 55.000 0.00 0.00 0.00 4.46
589 590 2.024176 ATATGCGTCAGTGTTGGGAC 57.976 50.000 0.00 0.00 0.00 4.46
590 591 2.779755 AATATGCGTCAGTGTTGGGA 57.220 45.000 0.00 0.00 0.00 4.37
591 592 3.500982 CAAAATATGCGTCAGTGTTGGG 58.499 45.455 0.00 0.00 0.00 4.12
592 593 3.500982 CCAAAATATGCGTCAGTGTTGG 58.499 45.455 0.00 0.00 0.00 3.77
593 594 3.500982 CCCAAAATATGCGTCAGTGTTG 58.499 45.455 0.00 0.00 0.00 3.33
594 595 2.491693 CCCCAAAATATGCGTCAGTGTT 59.508 45.455 0.00 0.00 0.00 3.32
595 596 2.091541 CCCCAAAATATGCGTCAGTGT 58.908 47.619 0.00 0.00 0.00 3.55
596 597 1.202290 GCCCCAAAATATGCGTCAGTG 60.202 52.381 0.00 0.00 0.00 3.66
645 646 4.040376 GTCGTCGTCATTGGTATACTTCC 58.960 47.826 2.25 0.00 0.00 3.46
665 666 1.278238 GCACGTATACCAGCAGTGTC 58.722 55.000 8.80 0.16 35.46 3.67
666 667 0.457853 CGCACGTATACCAGCAGTGT 60.458 55.000 12.88 0.00 35.46 3.55
667 668 0.457853 ACGCACGTATACCAGCAGTG 60.458 55.000 12.88 8.64 36.05 3.66
668 669 0.457853 CACGCACGTATACCAGCAGT 60.458 55.000 12.88 9.23 0.00 4.40
672 673 1.226463 TCGCACGCACGTATACCAG 60.226 57.895 0.00 0.00 0.00 4.00
674 675 2.226225 GGTCGCACGCACGTATACC 61.226 63.158 0.00 0.29 0.00 2.73
675 676 1.072116 TTGGTCGCACGCACGTATAC 61.072 55.000 0.00 0.00 0.00 1.47
705 706 4.549516 GTACTCCCTCGCCGACGC 62.550 72.222 0.00 0.00 39.84 5.19
706 707 1.522355 TAGTACTCCCTCGCCGACG 60.522 63.158 0.00 0.00 42.01 5.12
716 717 3.615155 AGGGTCAACGTAGTAGTACTCC 58.385 50.000 5.96 0.00 45.00 3.85
717 718 3.625313 GGAGGGTCAACGTAGTAGTACTC 59.375 52.174 5.96 0.00 45.00 2.59
720 721 3.719268 TGGAGGGTCAACGTAGTAGTA 57.281 47.619 0.00 0.00 45.00 1.82
721 722 2.592102 TGGAGGGTCAACGTAGTAGT 57.408 50.000 0.00 0.00 45.00 2.73
722 723 3.021695 TCATGGAGGGTCAACGTAGTAG 58.978 50.000 0.00 0.00 45.00 2.57
750 751 3.941483 ACTTGAAGAAATAGGGTCATGCG 59.059 43.478 0.00 0.00 0.00 4.73
761 762 9.732130 ACTAGCTTTGAGATAACTTGAAGAAAT 57.268 29.630 0.00 0.00 0.00 2.17
824 827 5.470098 CGGATTATAGAATTGGACAGTTGGG 59.530 44.000 0.00 0.00 0.00 4.12
825 828 5.470098 CCGGATTATAGAATTGGACAGTTGG 59.530 44.000 0.00 0.00 0.00 3.77
935 939 2.479566 TGGTCTGAGCAATGGAAGAC 57.520 50.000 7.15 0.00 38.65 3.01
968 972 3.423539 TGTGAGTTCTTGGATGGAAGG 57.576 47.619 0.00 0.00 0.00 3.46
995 999 0.322816 TTCAGCCCAAGACATGCCTC 60.323 55.000 0.00 0.00 0.00 4.70
998 1002 0.244721 GGTTTCAGCCCAAGACATGC 59.755 55.000 0.00 0.00 0.00 4.06
1251 1255 1.374252 GAAGAGGAAAGCGCCGTCA 60.374 57.895 2.29 0.00 0.00 4.35
1367 1371 0.036388 GGACGCATTCTCCTTCACCA 60.036 55.000 0.00 0.00 0.00 4.17
1435 1439 0.179020 TTTGTGGACCAGACCAGCAG 60.179 55.000 0.00 0.00 40.85 4.24
1436 1440 0.465460 GTTTGTGGACCAGACCAGCA 60.465 55.000 0.00 0.00 40.85 4.41
1463 1467 4.175337 CACCGACGATGGGGCCAT 62.175 66.667 4.39 0.00 39.69 4.40
1605 1609 3.879295 TCAAGTTTGAGGAAGCTGAAGTG 59.121 43.478 0.00 0.00 32.50 3.16
1692 1696 1.982660 TCTGATAGTAGGACTGCGGG 58.017 55.000 0.00 0.00 0.00 6.13
1715 1719 3.084039 ACTGCATCGGTGACATTGAATT 58.916 40.909 0.00 0.00 0.00 2.17
1719 1723 1.536766 ACAACTGCATCGGTGACATTG 59.463 47.619 0.00 2.05 0.00 2.82
1752 1756 6.942005 TCTTTGCTTCATCAGAGGAAATGTTA 59.058 34.615 0.00 0.00 0.00 2.41
1781 1785 0.824109 CAAGGAGATGTAGGCGGTGA 59.176 55.000 0.00 0.00 0.00 4.02
1794 1798 0.741221 GGCTGCCTCGTAACAAGGAG 60.741 60.000 12.43 0.00 35.83 3.69
1835 1839 1.877637 TAACTTGATGCGTGTGCTGT 58.122 45.000 0.00 0.00 43.34 4.40
2013 2017 4.080356 CCCTCTGAACAAATCCCATACTCA 60.080 45.833 0.00 0.00 0.00 3.41
2057 2061 5.567138 AAAAAGTGTGTCTCCAGAACTTG 57.433 39.130 0.00 0.00 32.01 3.16
2079 2083 1.735973 CCGATCATCCAGCTGACGA 59.264 57.895 17.39 8.76 0.00 4.20
2094 2098 1.223487 GCCCAGATTAGGTTGCCGA 59.777 57.895 0.00 0.00 0.00 5.54
2341 2345 8.608185 AAGTTATATCCAATGGTTCCATGTTT 57.392 30.769 5.02 0.00 0.00 2.83
2404 2408 3.623060 GCATTCAAGCCTTTACTCGATGA 59.377 43.478 0.00 0.00 0.00 2.92
2486 2490 6.418057 TCTTTGTTATTGCCCTTTTGATGT 57.582 33.333 0.00 0.00 0.00 3.06
2503 2507 1.558756 CTCCTCCTGCATCCTCTTTGT 59.441 52.381 0.00 0.00 0.00 2.83
2517 2521 2.158798 CCCTTTAAACGGATCCTCCTCC 60.159 54.545 10.75 0.00 33.30 4.30
2667 2671 4.558178 CAATGTCCTGCAAGCATTTAACA 58.442 39.130 0.00 0.00 31.31 2.41
2721 2725 9.743581 ATATGATGAATACTGCCAATTGTGATA 57.256 29.630 4.43 0.00 0.00 2.15
2875 2879 9.796120 GTCAAGTATAATCCTGTATCTAGATGC 57.204 37.037 15.79 14.54 0.00 3.91
3249 3253 2.558795 CACTATATCCAGGACCTGACCG 59.441 54.545 23.77 6.48 32.44 4.79
3252 3256 3.727391 TCTCCACTATATCCAGGACCTGA 59.273 47.826 23.77 9.46 32.44 3.86
3399 3403 2.565841 GTCTCTATGTCCATTGCACCC 58.434 52.381 0.00 0.00 0.00 4.61
3640 3645 9.823098 CTGCTATTTGCTTTTATGATATGAGTC 57.177 33.333 0.00 0.00 43.37 3.36
3642 3647 9.006839 TCCTGCTATTTGCTTTTATGATATGAG 57.993 33.333 0.00 0.00 43.37 2.90
3643 3648 8.786898 GTCCTGCTATTTGCTTTTATGATATGA 58.213 33.333 0.00 0.00 43.37 2.15
3644 3649 8.570488 TGTCCTGCTATTTGCTTTTATGATATG 58.430 33.333 0.00 0.00 43.37 1.78
3645 3650 8.696043 TGTCCTGCTATTTGCTTTTATGATAT 57.304 30.769 0.00 0.00 43.37 1.63
3646 3651 8.518430 TTGTCCTGCTATTTGCTTTTATGATA 57.482 30.769 0.00 0.00 43.37 2.15
3651 3656 4.522405 TGCTTGTCCTGCTATTTGCTTTTA 59.478 37.500 0.00 0.00 43.37 1.52
3831 3961 9.065871 CCTGAAAATACTAAGAAATTTGCTTCG 57.934 33.333 0.00 0.00 0.00 3.79
3855 3989 5.982890 ATGGAAAAATTGATGTCGAACCT 57.017 34.783 0.00 0.00 0.00 3.50
3856 3990 6.868339 AGAAATGGAAAAATTGATGTCGAACC 59.132 34.615 0.00 0.00 0.00 3.62
3880 4014 1.101331 GAAAGGCAAGGATGGAGCAG 58.899 55.000 0.00 0.00 0.00 4.24
3981 4119 5.659079 TGTTTGTGGTCCTTTTCCATAGTTT 59.341 36.000 0.00 0.00 37.30 2.66
4003 4148 6.716628 TGCCAGTCTTAAAGATCTTTTGATGT 59.283 34.615 25.02 12.34 39.67 3.06
4059 4205 5.987347 GGCGTGCCTTTGATAGTTAGTTATA 59.013 40.000 2.98 0.00 0.00 0.98
4072 4218 0.456653 GCTGTTATGGCGTGCCTTTG 60.457 55.000 12.84 0.00 36.94 2.77
4077 4223 2.793946 CTGGCTGTTATGGCGTGC 59.206 61.111 0.00 0.00 35.06 5.34
4122 4268 5.473162 TGTGCTGTTGCTTGATATAGTTTGT 59.527 36.000 0.00 0.00 40.48 2.83
4202 4352 4.406844 GCAATATGCGTTTTGATGTTCG 57.593 40.909 12.62 0.00 31.71 3.95
4219 4369 3.420893 TGCTAAGTTGTAGCCTTGCAAT 58.579 40.909 0.00 0.00 39.69 3.56
4295 4445 5.988287 TCTTTGTTTTGCTCCCTCAAAATT 58.012 33.333 5.18 0.00 44.59 1.82
4297 4447 4.709397 TCTCTTTGTTTTGCTCCCTCAAAA 59.291 37.500 0.00 0.00 41.87 2.44
4377 4532 3.351740 TGTCTTCACCAAAACTGCTCAA 58.648 40.909 0.00 0.00 0.00 3.02
4402 4557 6.488683 CCCATACTACTTTTTGAACAAGGTGA 59.511 38.462 0.00 0.00 0.00 4.02
4452 4607 6.607004 TCTACTATAAGCCTTATTCAGGGC 57.393 41.667 1.63 0.00 44.16 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.