Multiple sequence alignment - TraesCS2A01G426200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G426200 chr2A 100.000 6278 0 0 1 6278 679890606 679884329 0.000000e+00 11594.0
1 TraesCS2A01G426200 chr2B 92.611 2409 112 34 520 2893 639223739 639221362 0.000000e+00 3402.0
2 TraesCS2A01G426200 chr2B 89.488 2245 151 29 2978 5172 639221244 639219035 0.000000e+00 2760.0
3 TraesCS2A01G426200 chr2B 92.079 1111 66 12 5181 6278 639219073 639217972 0.000000e+00 1544.0
4 TraesCS2A01G426200 chr2B 90.126 476 37 7 64 530 639238891 639238417 1.500000e-170 610.0
5 TraesCS2A01G426200 chr2B 91.228 57 4 1 5588 5643 639218596 639218540 6.750000e-10 76.8
6 TraesCS2A01G426200 chr2D 91.872 2313 117 28 631 2888 537221377 537219081 0.000000e+00 3164.0
7 TraesCS2A01G426200 chr2D 90.461 2254 142 21 2978 5178 537218945 537216712 0.000000e+00 2904.0
8 TraesCS2A01G426200 chr2D 90.395 1114 62 18 5181 6278 537216756 537215672 0.000000e+00 1423.0
9 TraesCS2A01G426200 chr2D 92.174 115 9 0 59 173 537222304 537222190 5.040000e-36 163.0
10 TraesCS2A01G426200 chr2D 84.921 126 7 7 485 610 537221484 537221371 3.980000e-22 117.0
11 TraesCS2A01G426200 chr5A 100.000 50 0 0 3 52 55053104 55053153 6.700000e-15 93.5
12 TraesCS2A01G426200 chr7A 96.078 51 2 0 1 51 685451079 685451129 4.030000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G426200 chr2A 679884329 679890606 6277 True 11594.0 11594 100.0000 1 6278 1 chr2A.!!$R1 6277
1 TraesCS2A01G426200 chr2B 639217972 639223739 5767 True 1945.7 3402 91.3515 520 6278 4 chr2B.!!$R2 5758
2 TraesCS2A01G426200 chr2D 537215672 537222304 6632 True 1554.2 3164 89.9646 59 6278 5 chr2D.!!$R1 6219

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
923 1382 0.036875 CACAGACAAACCTCCCTCCC 59.963 60.0 0.00 0.00 0.0 4.30 F
924 1383 0.104409 ACAGACAAACCTCCCTCCCT 60.104 55.0 0.00 0.00 0.0 4.20 F
1026 1485 0.107456 CCGAACTCCCATGCATAGCT 59.893 55.0 0.00 0.00 0.0 3.32 F
2122 2630 0.312416 GTCACCTCCTCCGATCGATG 59.688 60.0 18.66 8.51 0.0 3.84 F
4066 4708 0.179234 TCAGTCAGTTTCACGGGCAA 59.821 50.0 0.00 0.00 0.0 4.52 F
4793 5435 0.326927 GGCCCAGCACAAGTAACCTA 59.673 55.0 0.00 0.00 0.0 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2253 2765 0.517316 GGTCGTCAACTTGCATGTCC 59.483 55.0 5.61 0.00 0.00 4.02 R
2668 3194 0.693049 ACAAGCCGGAGACCTTGAAT 59.307 50.0 21.76 2.55 38.36 2.57 R
3011 3612 0.675837 TCCACGACGTACTCCCTGAG 60.676 60.0 0.00 0.00 35.52 3.35 R
4108 4750 0.036577 CTCCCTCTGTTCACAGCAGG 60.037 60.0 14.10 14.10 43.46 4.85 R
5157 5812 0.034756 CACGGGACTGTCATGAACCA 59.965 55.0 10.38 0.00 0.00 3.67 R
5933 6602 0.525029 GCTCGAGCGGGTAGTGTAAC 60.525 60.0 23.61 0.00 0.00 2.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.619233 TCTTTGCTTAAACTTCGCCAC 57.381 42.857 0.00 0.00 0.00 5.01
21 22 2.946329 TCTTTGCTTAAACTTCGCCACA 59.054 40.909 0.00 0.00 0.00 4.17
22 23 2.766970 TTGCTTAAACTTCGCCACAC 57.233 45.000 0.00 0.00 0.00 3.82
23 24 0.948678 TGCTTAAACTTCGCCACACC 59.051 50.000 0.00 0.00 0.00 4.16
24 25 1.235724 GCTTAAACTTCGCCACACCT 58.764 50.000 0.00 0.00 0.00 4.00
25 26 1.607148 GCTTAAACTTCGCCACACCTT 59.393 47.619 0.00 0.00 0.00 3.50
26 27 2.809696 GCTTAAACTTCGCCACACCTTA 59.190 45.455 0.00 0.00 0.00 2.69
27 28 3.251487 GCTTAAACTTCGCCACACCTTAA 59.749 43.478 0.00 0.00 0.00 1.85
28 29 4.082949 GCTTAAACTTCGCCACACCTTAAT 60.083 41.667 0.00 0.00 0.00 1.40
29 30 5.564063 GCTTAAACTTCGCCACACCTTAATT 60.564 40.000 0.00 0.00 0.00 1.40
30 31 4.929819 AAACTTCGCCACACCTTAATTT 57.070 36.364 0.00 0.00 0.00 1.82
31 32 4.929819 AACTTCGCCACACCTTAATTTT 57.070 36.364 0.00 0.00 0.00 1.82
32 33 4.237349 ACTTCGCCACACCTTAATTTTG 57.763 40.909 0.00 0.00 0.00 2.44
33 34 3.634910 ACTTCGCCACACCTTAATTTTGT 59.365 39.130 0.00 0.00 0.00 2.83
34 35 4.098807 ACTTCGCCACACCTTAATTTTGTT 59.901 37.500 0.00 0.00 0.00 2.83
35 36 4.657436 TCGCCACACCTTAATTTTGTTT 57.343 36.364 0.00 0.00 0.00 2.83
36 37 4.612943 TCGCCACACCTTAATTTTGTTTC 58.387 39.130 0.00 0.00 0.00 2.78
37 38 3.423867 CGCCACACCTTAATTTTGTTTCG 59.576 43.478 0.00 0.00 0.00 3.46
38 39 4.364860 GCCACACCTTAATTTTGTTTCGT 58.635 39.130 0.00 0.00 0.00 3.85
39 40 4.443063 GCCACACCTTAATTTTGTTTCGTC 59.557 41.667 0.00 0.00 0.00 4.20
40 41 4.979815 CCACACCTTAATTTTGTTTCGTCC 59.020 41.667 0.00 0.00 0.00 4.79
41 42 5.221165 CCACACCTTAATTTTGTTTCGTCCT 60.221 40.000 0.00 0.00 0.00 3.85
42 43 5.912955 CACACCTTAATTTTGTTTCGTCCTC 59.087 40.000 0.00 0.00 0.00 3.71
43 44 5.009310 ACACCTTAATTTTGTTTCGTCCTCC 59.991 40.000 0.00 0.00 0.00 4.30
44 45 4.214758 ACCTTAATTTTGTTTCGTCCTCCG 59.785 41.667 0.00 0.00 38.13 4.63
45 46 2.699251 AATTTTGTTTCGTCCTCCGC 57.301 45.000 0.00 0.00 36.19 5.54
46 47 0.879090 ATTTTGTTTCGTCCTCCGCC 59.121 50.000 0.00 0.00 36.19 6.13
47 48 0.179040 TTTTGTTTCGTCCTCCGCCT 60.179 50.000 0.00 0.00 36.19 5.52
48 49 0.601841 TTTGTTTCGTCCTCCGCCTC 60.602 55.000 0.00 0.00 36.19 4.70
49 50 1.469335 TTGTTTCGTCCTCCGCCTCT 61.469 55.000 0.00 0.00 36.19 3.69
50 51 1.446272 GTTTCGTCCTCCGCCTCTG 60.446 63.158 0.00 0.00 36.19 3.35
51 52 2.646175 TTTCGTCCTCCGCCTCTGG 61.646 63.158 0.00 0.00 36.19 3.86
54 55 3.462678 GTCCTCCGCCTCTGGGTC 61.463 72.222 0.00 0.00 34.45 4.46
55 56 3.673597 TCCTCCGCCTCTGGGTCT 61.674 66.667 0.00 0.00 34.45 3.85
56 57 2.279073 CCTCCGCCTCTGGGTCTA 59.721 66.667 0.00 0.00 34.45 2.59
57 58 1.830408 CCTCCGCCTCTGGGTCTAG 60.830 68.421 0.00 0.00 34.45 2.43
61 62 0.106619 CCGCCTCTGGGTCTAGTAGT 60.107 60.000 0.00 0.00 34.45 2.73
95 96 8.223330 ACCTCCATTAGCTTGATGATTAAGAAT 58.777 33.333 10.41 0.00 0.00 2.40
104 105 7.504911 AGCTTGATGATTAAGAATTACAGGCAT 59.495 33.333 0.68 0.00 32.98 4.40
107 108 8.750515 TGATGATTAAGAATTACAGGCATTGA 57.249 30.769 0.00 0.00 0.00 2.57
137 138 6.821160 ACCAATTAACAAACTTTGGTCTTTGG 59.179 34.615 21.26 21.26 46.79 3.28
144 145 0.593128 CTTTGGTCTTTGGGCTGACG 59.407 55.000 0.00 0.00 34.31 4.35
167 168 2.485814 GTGAGAACATGAAACAGGCTCC 59.514 50.000 0.00 0.00 0.00 4.70
183 637 1.446907 CTCCATGACCACTTGCACTC 58.553 55.000 0.00 0.00 0.00 3.51
185 639 1.421268 TCCATGACCACTTGCACTCTT 59.579 47.619 0.00 0.00 0.00 2.85
194 648 6.770785 TGACCACTTGCACTCTTATTTTAAGT 59.229 34.615 0.00 0.00 0.00 2.24
203 657 9.073475 TGCACTCTTATTTTAAGTATGGTTGTT 57.927 29.630 0.00 0.00 0.00 2.83
225 679 1.275291 ACACATCACCTTAGGTCACGG 59.725 52.381 0.00 0.00 31.02 4.94
226 680 0.249398 ACATCACCTTAGGTCACGGC 59.751 55.000 0.00 0.00 31.02 5.68
227 681 0.249120 CATCACCTTAGGTCACGGCA 59.751 55.000 0.00 0.00 31.02 5.69
228 682 1.134401 CATCACCTTAGGTCACGGCAT 60.134 52.381 0.00 0.00 31.02 4.40
236 690 0.951558 AGGTCACGGCATTTGACAAC 59.048 50.000 12.14 0.00 44.47 3.32
240 694 1.336440 TCACGGCATTTGACAACCTTG 59.664 47.619 0.00 0.00 0.00 3.61
244 698 2.794350 CGGCATTTGACAACCTTGTTTC 59.206 45.455 0.00 0.00 42.43 2.78
250 704 4.981806 TTGACAACCTTGTTTCTTCCAG 57.018 40.909 0.00 0.00 42.43 3.86
261 715 4.072131 TGTTTCTTCCAGGAACTATGCAC 58.928 43.478 0.00 0.00 36.02 4.57
288 742 4.589216 TTTCAAGCAAGTCCCAAATGAG 57.411 40.909 0.00 0.00 0.00 2.90
306 760 0.541296 AGCATTGCCTTGTTCAGCCT 60.541 50.000 4.70 0.00 0.00 4.58
356 812 6.419791 ACCCCTCTTATATCATCTCTAGTCG 58.580 44.000 0.00 0.00 0.00 4.18
379 835 1.586422 CTGCATCCAACTATCACGGG 58.414 55.000 0.00 0.00 0.00 5.28
381 837 1.557371 TGCATCCAACTATCACGGGAA 59.443 47.619 0.00 0.00 32.25 3.97
402 860 1.822990 CCAACTCCTAGGAGCGTACAA 59.177 52.381 34.48 0.16 45.54 2.41
405 863 0.381089 CTCCTAGGAGCGTACAACCG 59.619 60.000 25.73 0.00 35.31 4.44
419 877 2.275380 AACCGCCATTGCAGTTCCC 61.275 57.895 0.00 0.00 32.71 3.97
420 878 2.676121 CCGCCATTGCAGTTCCCA 60.676 61.111 0.00 0.00 37.32 4.37
421 879 2.703798 CCGCCATTGCAGTTCCCAG 61.704 63.158 0.00 0.00 37.32 4.45
422 880 1.973281 CGCCATTGCAGTTCCCAGT 60.973 57.895 0.00 0.00 37.32 4.00
423 881 1.588082 GCCATTGCAGTTCCCAGTG 59.412 57.895 0.00 0.00 37.47 3.66
424 882 0.895100 GCCATTGCAGTTCCCAGTGA 60.895 55.000 0.00 0.00 37.47 3.41
425 883 1.171308 CCATTGCAGTTCCCAGTGAG 58.829 55.000 0.00 0.00 0.00 3.51
426 884 1.271543 CCATTGCAGTTCCCAGTGAGA 60.272 52.381 0.00 0.00 0.00 3.27
427 885 1.808945 CATTGCAGTTCCCAGTGAGAC 59.191 52.381 0.00 0.00 0.00 3.36
428 886 0.108585 TTGCAGTTCCCAGTGAGACC 59.891 55.000 0.00 0.00 0.00 3.85
429 887 1.053835 TGCAGTTCCCAGTGAGACCA 61.054 55.000 0.00 0.00 0.00 4.02
430 888 0.603975 GCAGTTCCCAGTGAGACCAC 60.604 60.000 0.00 0.00 43.50 4.16
448 906 2.437002 GGGAACCGCACCGCAATA 60.437 61.111 0.00 0.00 40.86 1.90
449 907 2.757056 GGGAACCGCACCGCAATAC 61.757 63.158 0.00 0.00 40.86 1.89
450 908 2.757056 GGAACCGCACCGCAATACC 61.757 63.158 0.00 0.00 0.00 2.73
451 909 3.090960 GAACCGCACCGCAATACCG 62.091 63.158 0.00 0.00 0.00 4.02
458 916 4.823419 CCGCAATACCGGTCGCCA 62.823 66.667 12.40 0.00 43.24 5.69
459 917 3.560278 CGCAATACCGGTCGCCAC 61.560 66.667 12.40 0.00 0.00 5.01
460 918 3.560278 GCAATACCGGTCGCCACG 61.560 66.667 12.40 0.00 0.00 4.94
461 919 3.560278 CAATACCGGTCGCCACGC 61.560 66.667 12.40 0.00 0.00 5.34
475 933 4.314440 ACGCGAGCACACCACCAT 62.314 61.111 15.93 0.00 0.00 3.55
476 934 3.792047 CGCGAGCACACCACCATG 61.792 66.667 0.00 0.00 0.00 3.66
477 935 2.669569 GCGAGCACACCACCATGT 60.670 61.111 0.00 0.00 0.00 3.21
482 940 4.162592 CACACCACCATGTGCACT 57.837 55.556 19.41 0.15 43.29 4.40
483 941 1.655885 CACACCACCATGTGCACTG 59.344 57.895 19.41 13.21 43.29 3.66
576 1034 4.891727 ATAGGGTGAAGGCGCGCG 62.892 66.667 28.44 28.44 41.76 6.86
817 1275 2.746277 CGGAAACCTCAAGGGCCG 60.746 66.667 11.19 11.19 40.27 6.13
865 1323 1.352017 TGCAGCCATTCCTCTTCTTCA 59.648 47.619 0.00 0.00 0.00 3.02
923 1382 0.036875 CACAGACAAACCTCCCTCCC 59.963 60.000 0.00 0.00 0.00 4.30
924 1383 0.104409 ACAGACAAACCTCCCTCCCT 60.104 55.000 0.00 0.00 0.00 4.20
939 1398 2.654863 CTCCCTCTCTCTCTCTTGTCC 58.345 57.143 0.00 0.00 0.00 4.02
983 1442 1.035923 TGAATCCTAGCTGCTCGAGG 58.964 55.000 15.58 9.00 38.75 4.63
1026 1485 0.107456 CCGAACTCCCATGCATAGCT 59.893 55.000 0.00 0.00 0.00 3.32
1027 1486 1.224075 CGAACTCCCATGCATAGCTG 58.776 55.000 0.00 0.00 0.00 4.24
1096 1555 4.728102 CCGTCGCCGCCTACACAA 62.728 66.667 0.00 0.00 0.00 3.33
1102 1561 2.654877 CCGCCTACACAACCTCGT 59.345 61.111 0.00 0.00 0.00 4.18
1106 1565 1.369692 CCTACACAACCTCGTGCCA 59.630 57.895 0.00 0.00 40.73 4.92
1107 1566 0.949105 CCTACACAACCTCGTGCCAC 60.949 60.000 0.00 0.00 40.73 5.01
1108 1567 0.949105 CTACACAACCTCGTGCCACC 60.949 60.000 0.00 0.00 40.73 4.61
1109 1568 1.687297 TACACAACCTCGTGCCACCA 61.687 55.000 0.00 0.00 40.73 4.17
1558 2017 1.957877 GCTCTGGGTAATAGTCTCGCT 59.042 52.381 0.00 0.00 0.00 4.93
1559 2018 2.030628 GCTCTGGGTAATAGTCTCGCTC 60.031 54.545 0.00 0.00 0.00 5.03
1560 2019 3.482436 CTCTGGGTAATAGTCTCGCTCT 58.518 50.000 0.00 0.00 0.00 4.09
1561 2020 3.215151 TCTGGGTAATAGTCTCGCTCTG 58.785 50.000 0.00 0.00 0.00 3.35
1562 2021 2.294791 CTGGGTAATAGTCTCGCTCTGG 59.705 54.545 0.00 0.00 0.00 3.86
1563 2022 1.614413 GGGTAATAGTCTCGCTCTGGG 59.386 57.143 0.00 0.00 0.00 4.45
1564 2023 2.308690 GGTAATAGTCTCGCTCTGGGT 58.691 52.381 0.00 0.00 0.00 4.51
1565 2024 3.484407 GGTAATAGTCTCGCTCTGGGTA 58.516 50.000 0.00 0.00 0.00 3.69
1566 2025 3.887716 GGTAATAGTCTCGCTCTGGGTAA 59.112 47.826 0.00 0.00 0.00 2.85
1569 2028 5.968528 AATAGTCTCGCTCTGGGTAATAG 57.031 43.478 0.00 0.00 0.00 1.73
1627 2101 8.055279 TCTTCTCCATTGATTTGTTTATGTCC 57.945 34.615 0.00 0.00 0.00 4.02
1632 2106 6.601217 TCCATTGATTTGTTTATGTCCGATGA 59.399 34.615 0.00 0.00 0.00 2.92
1634 2108 7.380333 CCATTGATTTGTTTATGTCCGATGATG 59.620 37.037 0.00 0.00 0.00 3.07
1635 2109 5.820131 TGATTTGTTTATGTCCGATGATGC 58.180 37.500 0.00 0.00 0.00 3.91
1640 2114 4.452114 TGTTTATGTCCGATGATGCTATGC 59.548 41.667 0.00 0.00 0.00 3.14
1665 2139 5.738118 ACACATTGAAAATTGCAACTTGG 57.262 34.783 0.00 0.00 0.00 3.61
1706 2180 2.097036 CTTCAGCTTCATCATTGGCCA 58.903 47.619 0.00 0.00 0.00 5.36
1717 2197 6.704289 TCATCATTGGCCAGATTTTTCTAG 57.296 37.500 5.11 0.00 0.00 2.43
1755 2249 1.062587 CGGATGCGCTCGAGAAAATTT 59.937 47.619 18.75 0.00 0.00 1.82
1756 2250 2.284150 CGGATGCGCTCGAGAAAATTTA 59.716 45.455 18.75 0.00 0.00 1.40
1757 2251 3.602491 CGGATGCGCTCGAGAAAATTTAG 60.602 47.826 18.75 0.00 0.00 1.85
1758 2252 3.555956 GGATGCGCTCGAGAAAATTTAGA 59.444 43.478 18.75 0.00 0.00 2.10
1759 2253 4.212214 GGATGCGCTCGAGAAAATTTAGAT 59.788 41.667 18.75 0.00 0.00 1.98
1760 2254 5.405571 GGATGCGCTCGAGAAAATTTAGATA 59.594 40.000 18.75 0.00 0.00 1.98
1761 2255 6.073765 GGATGCGCTCGAGAAAATTTAGATAA 60.074 38.462 18.75 0.00 0.00 1.75
1762 2256 6.656314 TGCGCTCGAGAAAATTTAGATAAA 57.344 33.333 18.75 0.00 0.00 1.40
1763 2257 7.246674 TGCGCTCGAGAAAATTTAGATAAAT 57.753 32.000 18.75 0.00 37.49 1.40
1764 2258 7.345192 TGCGCTCGAGAAAATTTAGATAAATC 58.655 34.615 18.75 0.00 35.00 2.17
1781 2275 6.939163 AGATAAATCATGTATTCACTGGGCTC 59.061 38.462 0.00 0.00 0.00 4.70
2122 2630 0.312416 GTCACCTCCTCCGATCGATG 59.688 60.000 18.66 8.51 0.00 3.84
2127 2635 1.269309 CCTCCTCCGATCGATGTTCAC 60.269 57.143 18.66 0.00 0.00 3.18
2167 2676 1.125711 AGGTTAGCCTGGTCCGTGTT 61.126 55.000 0.00 0.00 45.05 3.32
2174 2683 0.677731 CCTGGTCCGTGTTGATGCAT 60.678 55.000 0.00 0.00 0.00 3.96
2215 2727 1.080230 CTCCCTGTGAGCGTGACTG 60.080 63.158 0.00 0.00 33.47 3.51
2216 2728 2.740055 CCCTGTGAGCGTGACTGC 60.740 66.667 0.00 0.00 0.00 4.40
2361 2873 8.530269 AGACCACTTTATGTCTTAAAACGTAG 57.470 34.615 0.00 0.00 38.67 3.51
2362 2874 7.117379 AGACCACTTTATGTCTTAAAACGTAGC 59.883 37.037 0.00 0.00 38.67 3.58
2367 2879 7.440255 ACTTTATGTCTTAAAACGTAGCACAGT 59.560 33.333 0.00 0.00 29.52 3.55
2368 2880 7.718272 TTATGTCTTAAAACGTAGCACAGTT 57.282 32.000 0.00 0.00 0.00 3.16
2369 2881 8.815141 TTATGTCTTAAAACGTAGCACAGTTA 57.185 30.769 0.00 0.00 0.00 2.24
2370 2882 6.515043 TGTCTTAAAACGTAGCACAGTTAC 57.485 37.500 0.00 0.00 0.00 2.50
2387 2905 6.037500 CACAGTTACATCATGGATCAAACGAT 59.962 38.462 0.00 0.00 0.00 3.73
2389 2907 6.258507 CAGTTACATCATGGATCAAACGATCA 59.741 38.462 4.94 0.00 41.03 2.92
2429 2947 1.550524 TGTCTGTACCTCCATGCTGTC 59.449 52.381 0.00 0.00 0.00 3.51
2481 3005 8.825745 GCTTTGTTGATCAAAATTTCCAGTAAA 58.174 29.630 10.35 0.00 44.08 2.01
2522 3047 5.389859 TTCAGCTAAATTTGATGGTGGTG 57.610 39.130 0.00 0.99 0.00 4.17
2687 3214 0.693049 ATTCAAGGTCTCCGGCTTGT 59.307 50.000 16.17 0.00 0.00 3.16
2701 3228 2.601266 CGGCTTGTTTCACTTACCGTTG 60.601 50.000 0.00 0.00 34.61 4.10
2742 3274 3.690460 CCAGCAGGTTATTTTCAGTCCT 58.310 45.455 0.00 0.00 0.00 3.85
2772 3304 1.908619 TCCAAACTGATGCAGGCTCTA 59.091 47.619 0.00 0.00 35.51 2.43
2793 3325 1.679139 CAGATTTTATCGGCCTGCCA 58.321 50.000 9.17 0.00 35.37 4.92
2905 3455 8.883731 CAAGGTATGTATGTAGAGTCCTTTTTG 58.116 37.037 0.00 0.00 32.67 2.44
2908 3458 6.743575 ATGTATGTAGAGTCCTTTTTGCAC 57.256 37.500 0.00 0.00 0.00 4.57
2909 3459 5.616270 TGTATGTAGAGTCCTTTTTGCACA 58.384 37.500 0.00 0.00 0.00 4.57
2910 3460 6.058833 TGTATGTAGAGTCCTTTTTGCACAA 58.941 36.000 0.00 0.00 0.00 3.33
2912 3462 5.243426 TGTAGAGTCCTTTTTGCACAAAC 57.757 39.130 0.00 0.00 0.00 2.93
2913 3463 4.947388 TGTAGAGTCCTTTTTGCACAAACT 59.053 37.500 0.00 0.00 0.00 2.66
2915 3465 5.405935 AGAGTCCTTTTTGCACAAACTTT 57.594 34.783 0.00 0.00 0.00 2.66
2916 3466 5.793817 AGAGTCCTTTTTGCACAAACTTTT 58.206 33.333 0.00 0.00 0.00 2.27
2918 3468 6.147656 AGAGTCCTTTTTGCACAAACTTTTTG 59.852 34.615 0.00 0.00 0.00 2.44
2919 3469 5.994668 AGTCCTTTTTGCACAAACTTTTTGA 59.005 32.000 5.67 0.00 0.00 2.69
2920 3470 6.147656 AGTCCTTTTTGCACAAACTTTTTGAG 59.852 34.615 5.67 0.00 0.00 3.02
2921 3471 5.088068 CCTTTTTGCACAAACTTTTTGAGC 58.912 37.500 12.41 12.41 36.71 4.26
2932 3533 6.091169 ACAAACTTTTTGAGCATTCTGTGTTG 59.909 34.615 5.67 0.00 0.00 3.33
2935 3536 6.211515 ACTTTTTGAGCATTCTGTGTTGATC 58.788 36.000 0.00 0.00 0.00 2.92
2937 3538 5.771153 TTTGAGCATTCTGTGTTGATCAA 57.229 34.783 3.38 3.38 44.01 2.57
2938 3539 5.970317 TTGAGCATTCTGTGTTGATCAAT 57.030 34.783 12.12 0.00 41.72 2.57
2940 3541 4.763279 TGAGCATTCTGTGTTGATCAATGT 59.237 37.500 12.12 0.00 35.51 2.71
2941 3542 5.106436 TGAGCATTCTGTGTTGATCAATGTC 60.106 40.000 12.12 6.04 35.51 3.06
2942 3543 4.763279 AGCATTCTGTGTTGATCAATGTCA 59.237 37.500 12.12 10.09 0.00 3.58
2943 3544 5.417894 AGCATTCTGTGTTGATCAATGTCAT 59.582 36.000 12.12 0.00 0.00 3.06
2944 3545 5.515270 GCATTCTGTGTTGATCAATGTCATG 59.485 40.000 12.12 10.31 0.00 3.07
2945 3546 4.690184 TCTGTGTTGATCAATGTCATGC 57.310 40.909 12.12 0.00 0.00 4.06
2946 3547 4.073549 TCTGTGTTGATCAATGTCATGCA 58.926 39.130 12.12 0.00 0.00 3.96
2960 3561 5.159273 TGTCATGCATTGGTAGTGAGTAA 57.841 39.130 0.00 0.00 0.00 2.24
2961 3562 5.555966 TGTCATGCATTGGTAGTGAGTAAA 58.444 37.500 0.00 0.00 0.00 2.01
2962 3563 5.411361 TGTCATGCATTGGTAGTGAGTAAAC 59.589 40.000 0.00 0.00 0.00 2.01
2963 3564 5.411361 GTCATGCATTGGTAGTGAGTAAACA 59.589 40.000 0.00 0.00 0.00 2.83
2964 3565 6.094048 GTCATGCATTGGTAGTGAGTAAACAT 59.906 38.462 0.00 0.00 0.00 2.71
2965 3566 7.279981 GTCATGCATTGGTAGTGAGTAAACATA 59.720 37.037 0.00 0.00 0.00 2.29
2966 3567 7.992608 TCATGCATTGGTAGTGAGTAAACATAT 59.007 33.333 0.00 0.00 0.00 1.78
2967 3568 7.552458 TGCATTGGTAGTGAGTAAACATATG 57.448 36.000 0.00 0.00 0.00 1.78
2968 3569 7.334858 TGCATTGGTAGTGAGTAAACATATGA 58.665 34.615 10.38 0.00 0.00 2.15
2969 3570 7.279981 TGCATTGGTAGTGAGTAAACATATGAC 59.720 37.037 10.38 0.00 0.00 3.06
2970 3571 7.279981 GCATTGGTAGTGAGTAAACATATGACA 59.720 37.037 10.38 0.00 0.00 3.58
2971 3572 8.820933 CATTGGTAGTGAGTAAACATATGACAG 58.179 37.037 10.38 0.00 0.00 3.51
2972 3573 7.712204 TGGTAGTGAGTAAACATATGACAGA 57.288 36.000 10.38 0.00 0.00 3.41
2973 3574 8.306313 TGGTAGTGAGTAAACATATGACAGAT 57.694 34.615 10.38 0.00 0.00 2.90
2974 3575 9.416284 TGGTAGTGAGTAAACATATGACAGATA 57.584 33.333 10.38 0.00 0.00 1.98
2993 3594 2.283145 ATCTGCTCAGGTTGCTTTGT 57.717 45.000 0.00 0.00 0.00 2.83
2998 3599 5.312895 TCTGCTCAGGTTGCTTTGTAATTA 58.687 37.500 0.00 0.00 0.00 1.40
3000 3601 7.109501 TCTGCTCAGGTTGCTTTGTAATTATA 58.890 34.615 0.00 0.00 0.00 0.98
3011 3612 6.094881 TGCTTTGTAATTATACTGGTGCTTCC 59.905 38.462 0.00 0.00 32.98 3.46
3025 3626 0.456628 GCTTCCTCAGGGAGTACGTC 59.543 60.000 0.00 0.00 43.29 4.34
3037 3638 1.133458 GTACGTCGTGGACCTCGTC 59.867 63.158 15.10 9.20 37.66 4.20
3040 3641 2.641559 GTCGTGGACCTCGTCGTT 59.358 61.111 15.10 0.00 32.65 3.85
3042 3643 3.103911 CGTGGACCTCGTCGTTGC 61.104 66.667 7.79 0.00 32.65 4.17
3060 3661 2.516460 GCCAGGGAGCATCTGCAG 60.516 66.667 7.63 7.63 45.16 4.41
3106 3707 1.891811 CTGCTCTCCTCTGTGTCTTCA 59.108 52.381 0.00 0.00 0.00 3.02
3145 3746 3.368495 CACGGCAAGTTTGGAAAACTAC 58.632 45.455 5.85 2.41 0.00 2.73
3154 3755 2.472934 GAAAACTACGCGGCACCG 59.527 61.111 12.47 4.30 43.09 4.94
3200 3801 1.006825 TGACGATCGTTGCAACTCGG 61.007 55.000 31.87 19.82 32.79 4.63
3261 3884 9.346005 CAAAATATATATAGGCCATGCAGATGA 57.654 33.333 5.01 0.00 0.00 2.92
3262 3885 9.570468 AAAATATATATAGGCCATGCAGATGAG 57.430 33.333 5.01 0.00 0.00 2.90
3275 3898 4.969484 TGCAGATGAGCATACTGATTGAT 58.031 39.130 0.00 0.00 40.11 2.57
3277 3900 4.995487 GCAGATGAGCATACTGATTGATCA 59.005 41.667 0.00 0.00 42.96 2.92
3284 3907 6.927381 TGAGCATACTGATTGATCATGTACTG 59.073 38.462 0.00 0.00 34.80 2.74
3316 3939 1.133606 GGGGACAAGAACCCTGTTCAA 60.134 52.381 9.42 0.00 46.03 2.69
3325 3948 0.546122 ACCCTGTTCAAGCAGACACA 59.454 50.000 0.00 0.00 38.70 3.72
3394 4035 4.869861 GTGTTTCAAGTGTCAAGGCAATTT 59.130 37.500 0.00 0.00 0.00 1.82
3565 4206 4.319177 CTGGTACTTGCTTAGCTTCAGTT 58.681 43.478 5.60 0.00 0.00 3.16
3587 4228 6.865205 AGTTTTCTTATCAACTTGCTGCATTC 59.135 34.615 1.84 0.00 28.27 2.67
3615 4256 8.134895 GTGGATTTGATCACAGTTTACTGAAAA 58.865 33.333 16.31 8.65 46.59 2.29
3625 4266 5.359576 ACAGTTTACTGAAAATGCAGGTTCA 59.640 36.000 16.31 12.76 46.59 3.18
3634 4275 5.304101 TGAAAATGCAGGTTCATTTGGTACT 59.696 36.000 10.06 0.00 43.56 2.73
3670 4311 1.965643 TGGCACGGTTCTGTAAGTACT 59.034 47.619 0.00 0.00 34.34 2.73
3671 4312 2.288579 TGGCACGGTTCTGTAAGTACTG 60.289 50.000 0.00 0.00 45.06 2.74
3677 4318 4.979388 CGGTTCTGTAAGTACTGTAGACC 58.021 47.826 0.00 0.00 36.05 3.85
3690 4331 6.952358 AGTACTGTAGACCTTTCACTATGGAA 59.048 38.462 0.00 0.00 0.00 3.53
3758 4399 6.783708 TGAAATTGAGGTTGTAGTTTTGGT 57.216 33.333 0.00 0.00 0.00 3.67
3905 4547 4.428294 TGGATCTCAATCTGTCCCATTC 57.572 45.455 0.00 0.00 32.12 2.67
3927 4569 4.022935 TCTCTTTAGCTTGGCACATTGTTG 60.023 41.667 0.00 0.00 39.30 3.33
3977 4619 0.671163 TCGCCATCCAAACGTGGTAC 60.671 55.000 0.00 0.00 46.11 3.34
3988 4630 4.258543 CAAACGTGGTACTATTCATGGGT 58.741 43.478 0.00 0.00 0.00 4.51
3997 4639 2.292267 CTATTCATGGGTGCAGTGACC 58.708 52.381 0.00 0.00 34.96 4.02
4024 4666 3.454375 CCCGCATTTGTCGATAGTAACT 58.546 45.455 0.00 0.00 37.40 2.24
4063 4705 0.320771 CCCTCAGTCAGTTTCACGGG 60.321 60.000 0.00 0.00 0.00 5.28
4065 4707 0.249868 CTCAGTCAGTTTCACGGGCA 60.250 55.000 0.00 0.00 0.00 5.36
4066 4708 0.179234 TCAGTCAGTTTCACGGGCAA 59.821 50.000 0.00 0.00 0.00 4.52
4067 4709 1.021202 CAGTCAGTTTCACGGGCAAA 58.979 50.000 0.00 0.00 0.00 3.68
4072 4714 2.690497 TCAGTTTCACGGGCAAAATGAA 59.310 40.909 9.27 0.00 35.50 2.57
4086 4728 4.627035 GCAAAATGAACTAATTCCCTGCAC 59.373 41.667 0.00 0.00 33.49 4.57
4098 4740 1.144708 TCCCTGCACCAAACAGAATCA 59.855 47.619 0.00 0.00 37.32 2.57
4155 4797 2.344950 CGTCTCATCAGCAAAGCTTCT 58.655 47.619 0.00 0.00 36.40 2.85
4260 4902 2.094417 GCATGCTCCTGAAACGTTACTC 59.906 50.000 11.37 0.00 0.00 2.59
4275 4917 5.324739 CGTTACTCGTTTCACTGAATGTT 57.675 39.130 0.00 0.00 34.52 2.71
4296 4938 5.066375 TGTTATATGAAGCATTGCTGTGACC 59.934 40.000 12.82 0.61 39.62 4.02
4297 4939 1.913778 ATGAAGCATTGCTGTGACCA 58.086 45.000 12.82 6.22 39.62 4.02
4300 4942 2.223782 TGAAGCATTGCTGTGACCAAAC 60.224 45.455 12.82 0.00 39.62 2.93
4347 4989 2.398588 CACTGCCTGAACCCTCCTATA 58.601 52.381 0.00 0.00 0.00 1.31
4398 5040 2.681097 GCTGGTGGATAAGAACTGGTCC 60.681 54.545 0.00 0.00 0.00 4.46
4449 5091 3.507729 CGTAGCGCGGTCGAATAC 58.492 61.111 16.92 6.01 38.10 1.89
4468 5110 0.519077 CGGCTCTTCTGCTTTTGTCC 59.481 55.000 0.00 0.00 0.00 4.02
4470 5112 1.609208 GCTCTTCTGCTTTTGTCCCA 58.391 50.000 0.00 0.00 0.00 4.37
4546 5188 1.496060 AGGCGACCACCTTCATATCA 58.504 50.000 0.00 0.00 36.28 2.15
4586 5228 3.480470 ACAGTAAGCTTTGCATGACAGT 58.520 40.909 3.20 0.00 0.00 3.55
4589 5231 4.931601 CAGTAAGCTTTGCATGACAGTCTA 59.068 41.667 3.20 0.00 0.00 2.59
4604 5246 7.670009 TGACAGTCTACTCAGTTAGTAACTC 57.330 40.000 12.75 0.44 40.21 3.01
4722 5364 4.127171 AGAAATGTGACGTGTACAGCTTT 58.873 39.130 0.00 0.00 0.00 3.51
4793 5435 0.326927 GGCCCAGCACAAGTAACCTA 59.673 55.000 0.00 0.00 0.00 3.08
4794 5436 1.064685 GGCCCAGCACAAGTAACCTAT 60.065 52.381 0.00 0.00 0.00 2.57
4795 5437 2.620627 GGCCCAGCACAAGTAACCTATT 60.621 50.000 0.00 0.00 0.00 1.73
4796 5438 3.089284 GCCCAGCACAAGTAACCTATTT 58.911 45.455 0.00 0.00 0.00 1.40
4797 5439 3.128764 GCCCAGCACAAGTAACCTATTTC 59.871 47.826 0.00 0.00 0.00 2.17
4798 5440 4.589908 CCCAGCACAAGTAACCTATTTCT 58.410 43.478 0.00 0.00 0.00 2.52
4799 5441 4.396166 CCCAGCACAAGTAACCTATTTCTG 59.604 45.833 0.00 0.00 0.00 3.02
4800 5442 5.003804 CCAGCACAAGTAACCTATTTCTGT 58.996 41.667 0.00 0.00 0.00 3.41
4801 5443 5.106555 CCAGCACAAGTAACCTATTTCTGTG 60.107 44.000 0.00 0.00 0.00 3.66
4846 5501 3.384668 AGGCGATATTCGTGATTCACTG 58.615 45.455 14.54 8.42 42.81 3.66
4897 5552 1.471684 GCATTCCAGAACAGAAGGCTG 59.528 52.381 3.16 0.00 45.11 4.85
4906 5561 1.305623 CAGAAGGCTGCCAATCCCT 59.694 57.895 22.65 6.95 34.95 4.20
4924 5579 2.171448 CCCTAAAGACACCATCCCAGAG 59.829 54.545 0.00 0.00 0.00 3.35
4952 5607 2.887152 GCTCTTGTTGAATCCTGTTGGT 59.113 45.455 0.00 0.00 34.23 3.67
4980 5635 2.893424 AGCAAATTTCCCATGACCTGT 58.107 42.857 0.00 0.00 0.00 4.00
5014 5669 3.701241 TCAAAATTTCAAGTGACGGCAC 58.299 40.909 15.39 15.39 45.49 5.01
5031 5686 2.356741 GGCACCCATTAGTTCAGCCTAA 60.357 50.000 0.00 0.00 37.67 2.69
5045 5700 8.697846 AGTTCAGCCTAAGTTTAAAACAAAAC 57.302 30.769 0.00 0.00 39.22 2.43
5056 5711 9.743057 AAGTTTAAAACAAAACATCATCATCGA 57.257 25.926 0.00 0.00 40.97 3.59
5085 5740 7.167468 ACACGATTTTGCTTTATTTTCAGTGAC 59.833 33.333 0.00 0.00 0.00 3.67
5157 5812 1.411977 CTCAAGTCGATGCAGGGATCT 59.588 52.381 0.00 0.00 0.00 2.75
5175 5830 0.321671 CTGGTTCATGACAGTCCCGT 59.678 55.000 0.00 0.00 0.00 5.28
5177 5832 0.673644 GGTTCATGACAGTCCCGTGG 60.674 60.000 0.00 0.00 0.00 4.94
5178 5833 0.673644 GTTCATGACAGTCCCGTGGG 60.674 60.000 0.00 0.00 0.00 4.61
5179 5834 1.125093 TTCATGACAGTCCCGTGGGT 61.125 55.000 4.53 0.00 36.47 4.51
5180 5835 1.375908 CATGACAGTCCCGTGGGTG 60.376 63.158 4.53 0.00 36.47 4.61
5181 5836 1.841556 ATGACAGTCCCGTGGGTGT 60.842 57.895 4.53 2.63 36.47 4.16
5182 5837 1.415672 ATGACAGTCCCGTGGGTGTT 61.416 55.000 4.53 0.00 36.47 3.32
5183 5838 0.759812 TGACAGTCCCGTGGGTGTTA 60.760 55.000 4.53 0.00 36.47 2.41
5184 5839 0.320160 GACAGTCCCGTGGGTGTTAC 60.320 60.000 4.53 0.00 36.47 2.50
5185 5840 0.761702 ACAGTCCCGTGGGTGTTACT 60.762 55.000 4.53 0.00 36.47 2.24
5186 5841 0.037605 CAGTCCCGTGGGTGTTACTC 60.038 60.000 4.53 0.00 36.47 2.59
5187 5842 0.178941 AGTCCCGTGGGTGTTACTCT 60.179 55.000 4.53 0.00 36.47 3.24
5188 5843 1.076024 AGTCCCGTGGGTGTTACTCTA 59.924 52.381 4.53 0.00 36.47 2.43
5189 5844 1.895131 GTCCCGTGGGTGTTACTCTAA 59.105 52.381 4.53 0.00 36.47 2.10
5190 5845 2.094338 GTCCCGTGGGTGTTACTCTAAG 60.094 54.545 4.53 0.00 36.47 2.18
5191 5846 2.173519 CCCGTGGGTGTTACTCTAAGA 58.826 52.381 0.00 0.00 0.00 2.10
5192 5847 2.094338 CCCGTGGGTGTTACTCTAAGAC 60.094 54.545 0.00 0.00 0.00 3.01
5193 5848 2.415090 CCGTGGGTGTTACTCTAAGACG 60.415 54.545 0.00 0.00 33.17 4.18
5194 5849 2.485426 CGTGGGTGTTACTCTAAGACGA 59.515 50.000 0.00 0.00 33.17 4.20
5195 5850 3.128242 CGTGGGTGTTACTCTAAGACGAT 59.872 47.826 0.00 0.00 33.17 3.73
5196 5851 4.421948 GTGGGTGTTACTCTAAGACGATG 58.578 47.826 0.00 0.00 33.17 3.84
5197 5852 3.119245 TGGGTGTTACTCTAAGACGATGC 60.119 47.826 0.00 0.00 33.17 3.91
5198 5853 3.119245 GGGTGTTACTCTAAGACGATGCA 60.119 47.826 0.00 0.00 33.17 3.96
5199 5854 4.106197 GGTGTTACTCTAAGACGATGCAG 58.894 47.826 0.00 0.00 33.17 4.41
5200 5855 4.380655 GGTGTTACTCTAAGACGATGCAGT 60.381 45.833 0.00 0.00 33.17 4.40
5201 5856 4.559251 GTGTTACTCTAAGACGATGCAGTG 59.441 45.833 0.00 0.00 0.00 3.66
5202 5857 4.457949 TGTTACTCTAAGACGATGCAGTGA 59.542 41.667 0.00 0.00 0.00 3.41
5203 5858 5.125578 TGTTACTCTAAGACGATGCAGTGAT 59.874 40.000 0.00 0.00 0.00 3.06
5204 5859 4.300189 ACTCTAAGACGATGCAGTGATC 57.700 45.455 0.00 0.00 0.00 2.92
5205 5860 3.067461 ACTCTAAGACGATGCAGTGATCC 59.933 47.826 0.00 0.00 0.00 3.36
5206 5861 2.033424 TCTAAGACGATGCAGTGATCCG 59.967 50.000 0.00 0.00 0.00 4.18
5207 5862 0.179100 AAGACGATGCAGTGATCCGG 60.179 55.000 0.00 0.00 0.00 5.14
5208 5863 1.141881 GACGATGCAGTGATCCGGT 59.858 57.895 0.00 0.00 0.00 5.28
5209 5864 0.460284 GACGATGCAGTGATCCGGTT 60.460 55.000 0.00 0.00 0.00 4.44
5210 5865 0.460284 ACGATGCAGTGATCCGGTTC 60.460 55.000 0.00 2.73 0.00 3.62
5211 5866 0.460109 CGATGCAGTGATCCGGTTCA 60.460 55.000 11.25 11.25 0.00 3.18
5212 5867 1.807755 CGATGCAGTGATCCGGTTCAT 60.808 52.381 17.92 1.92 0.00 2.57
5213 5868 1.600957 GATGCAGTGATCCGGTTCATG 59.399 52.381 17.92 16.24 0.00 3.07
5214 5869 0.612744 TGCAGTGATCCGGTTCATGA 59.387 50.000 17.92 0.00 0.00 3.07
5215 5870 1.009829 GCAGTGATCCGGTTCATGAC 58.990 55.000 17.92 6.05 0.00 3.06
5216 5871 1.675714 GCAGTGATCCGGTTCATGACA 60.676 52.381 17.92 0.00 0.00 3.58
5217 5872 2.274437 CAGTGATCCGGTTCATGACAG 58.726 52.381 17.92 3.91 0.00 3.51
5218 5873 1.902508 AGTGATCCGGTTCATGACAGT 59.097 47.619 17.92 0.00 0.00 3.55
5219 5874 2.093973 AGTGATCCGGTTCATGACAGTC 60.094 50.000 17.92 3.99 0.00 3.51
5270 5927 8.346300 TCTCTACTCTGTCGATTAAAGCTAATG 58.654 37.037 0.00 0.00 0.00 1.90
5288 5948 5.125417 GCTAATGCACAACAAGGAATAAGGA 59.875 40.000 0.00 0.00 39.41 3.36
5290 5950 6.610075 AATGCACAACAAGGAATAAGGAAT 57.390 33.333 0.00 0.00 0.00 3.01
5291 5951 6.610075 ATGCACAACAAGGAATAAGGAATT 57.390 33.333 0.00 0.00 0.00 2.17
5292 5952 7.716799 ATGCACAACAAGGAATAAGGAATTA 57.283 32.000 0.00 0.00 0.00 1.40
5293 5953 7.156876 TGCACAACAAGGAATAAGGAATTAG 57.843 36.000 0.00 0.00 0.00 1.73
5294 5954 6.719370 TGCACAACAAGGAATAAGGAATTAGT 59.281 34.615 0.00 0.00 0.00 2.24
5295 5955 7.232534 TGCACAACAAGGAATAAGGAATTAGTT 59.767 33.333 0.00 0.00 0.00 2.24
5296 5956 8.088365 GCACAACAAGGAATAAGGAATTAGTTT 58.912 33.333 0.00 0.00 0.00 2.66
5297 5957 9.626045 CACAACAAGGAATAAGGAATTAGTTTC 57.374 33.333 0.00 0.00 0.00 2.78
5324 5987 1.139853 GAACATGGGAGGGTAGCTGAG 59.860 57.143 0.00 0.00 0.00 3.35
5359 6023 2.671130 TGCTGCATCGAGTATGTTGA 57.329 45.000 0.00 0.00 37.93 3.18
5436 6100 2.680352 TCCCGAGGGTCAGTGAGC 60.680 66.667 14.04 14.04 36.47 4.26
5447 6111 3.134804 GGGTCAGTGAGCTGGTTATGTAT 59.865 47.826 20.97 0.00 42.78 2.29
5486 6150 6.014584 TGTCAAAATAGTTCTACTGGCTGAGA 60.015 38.462 0.00 0.00 0.00 3.27
5534 6198 9.927081 AAATGGGAGATAGATTTGATAACAAGT 57.073 29.630 0.00 0.00 37.32 3.16
5535 6199 9.927081 AATGGGAGATAGATTTGATAACAAGTT 57.073 29.630 0.00 0.00 37.32 2.66
5556 6220 4.955811 TTAACCGCTCACATGATCCTAT 57.044 40.909 0.00 0.00 0.00 2.57
5672 6341 8.781067 TGAACTGAACTTAAATGAATTTCACG 57.219 30.769 0.15 0.00 33.20 4.35
5673 6342 8.616942 TGAACTGAACTTAAATGAATTTCACGA 58.383 29.630 0.15 0.00 33.20 4.35
5696 6365 1.202818 GGGGAGCATCATACTGGAACC 60.203 57.143 0.00 0.00 36.25 3.62
5712 6381 3.634910 TGGAACCGAACATATCTCATCGA 59.365 43.478 0.00 0.00 37.48 3.59
5728 6397 5.460091 TCTCATCGATTTTAGCATCGTCAAG 59.540 40.000 0.00 1.76 45.28 3.02
5737 6406 1.296392 CATCGTCAAGCAGTCCCCA 59.704 57.895 0.00 0.00 0.00 4.96
5763 6432 5.750067 CCTGTGTTTTCAACAGAAATTCCAG 59.250 40.000 5.17 0.00 43.10 3.86
5827 6496 3.561143 AGCATCTAGACTGATCGTTCCT 58.439 45.455 0.00 0.00 0.00 3.36
5909 6578 1.265095 GTTATACCATCCGCTCGTCGA 59.735 52.381 0.00 0.00 41.67 4.20
5928 6597 5.333798 CGTCGAACAATATCCACAGTGTTTT 60.334 40.000 0.00 0.00 34.44 2.43
5933 6602 4.022068 ACAATATCCACAGTGTTTTGCAGG 60.022 41.667 0.00 0.00 0.00 4.85
6066 6735 2.425143 TCTGAACCTCCCATTCATGC 57.575 50.000 0.00 0.00 35.57 4.06
6134 6803 7.065894 GCAGCGTTAACAATCATACAATCTAG 58.934 38.462 6.39 0.00 0.00 2.43
6136 6805 8.269424 CAGCGTTAACAATCATACAATCTAGTC 58.731 37.037 6.39 0.00 0.00 2.59
6137 6806 8.198109 AGCGTTAACAATCATACAATCTAGTCT 58.802 33.333 6.39 0.00 0.00 3.24
6138 6807 9.459640 GCGTTAACAATCATACAATCTAGTCTA 57.540 33.333 6.39 0.00 0.00 2.59
6226 6895 7.124448 ACAAGATGTGTTTTACCACCCTTTAAA 59.876 33.333 0.00 0.00 37.01 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.946329 TGTGGCGAAGTTTAAGCAAAGA 59.054 40.909 0.00 0.00 0.00 2.52
1 2 3.042887 GTGTGGCGAAGTTTAAGCAAAG 58.957 45.455 0.00 0.00 0.00 2.77
2 3 2.223618 GGTGTGGCGAAGTTTAAGCAAA 60.224 45.455 0.00 0.00 0.00 3.68
3 4 1.335496 GGTGTGGCGAAGTTTAAGCAA 59.665 47.619 0.00 0.00 0.00 3.91
4 5 0.948678 GGTGTGGCGAAGTTTAAGCA 59.051 50.000 0.00 0.00 0.00 3.91
5 6 1.235724 AGGTGTGGCGAAGTTTAAGC 58.764 50.000 0.00 0.00 0.00 3.09
6 7 5.622770 ATTAAGGTGTGGCGAAGTTTAAG 57.377 39.130 0.00 0.00 0.00 1.85
7 8 6.394025 AAATTAAGGTGTGGCGAAGTTTAA 57.606 33.333 0.00 0.00 0.00 1.52
8 9 6.183360 ACAAAATTAAGGTGTGGCGAAGTTTA 60.183 34.615 0.00 0.00 0.00 2.01
9 10 4.929819 AAATTAAGGTGTGGCGAAGTTT 57.070 36.364 0.00 0.00 0.00 2.66
10 11 4.098807 ACAAAATTAAGGTGTGGCGAAGTT 59.901 37.500 0.00 0.00 0.00 2.66
11 12 3.634910 ACAAAATTAAGGTGTGGCGAAGT 59.365 39.130 0.00 0.00 0.00 3.01
12 13 4.237349 ACAAAATTAAGGTGTGGCGAAG 57.763 40.909 0.00 0.00 0.00 3.79
13 14 4.657436 AACAAAATTAAGGTGTGGCGAA 57.343 36.364 0.00 0.00 0.00 4.70
14 15 4.612943 GAAACAAAATTAAGGTGTGGCGA 58.387 39.130 0.00 0.00 0.00 5.54
15 16 3.423867 CGAAACAAAATTAAGGTGTGGCG 59.576 43.478 0.00 0.00 0.00 5.69
16 17 4.364860 ACGAAACAAAATTAAGGTGTGGC 58.635 39.130 0.00 0.00 0.00 5.01
17 18 4.979815 GGACGAAACAAAATTAAGGTGTGG 59.020 41.667 0.00 0.00 0.00 4.17
18 19 5.827666 AGGACGAAACAAAATTAAGGTGTG 58.172 37.500 0.00 0.00 0.00 3.82
19 20 5.009310 GGAGGACGAAACAAAATTAAGGTGT 59.991 40.000 0.00 0.00 0.00 4.16
20 21 5.458015 GGAGGACGAAACAAAATTAAGGTG 58.542 41.667 0.00 0.00 0.00 4.00
21 22 5.700722 GGAGGACGAAACAAAATTAAGGT 57.299 39.130 0.00 0.00 0.00 3.50
37 38 2.569218 TAGACCCAGAGGCGGAGGAC 62.569 65.000 0.00 0.00 36.11 3.85
38 39 2.285889 CTAGACCCAGAGGCGGAGGA 62.286 65.000 0.00 0.00 36.11 3.71
39 40 1.830408 CTAGACCCAGAGGCGGAGG 60.830 68.421 0.00 0.00 36.11 4.30
40 41 0.183014 TACTAGACCCAGAGGCGGAG 59.817 60.000 0.00 0.00 36.11 4.63
41 42 0.183014 CTACTAGACCCAGAGGCGGA 59.817 60.000 0.00 0.00 36.11 5.54
42 43 0.106619 ACTACTAGACCCAGAGGCGG 60.107 60.000 0.00 0.00 36.11 6.13
43 44 1.025812 CACTACTAGACCCAGAGGCG 58.974 60.000 0.00 0.00 36.11 5.52
44 45 1.751924 CACACTACTAGACCCAGAGGC 59.248 57.143 0.00 0.00 36.11 4.70
45 46 2.025226 TCCACACTACTAGACCCAGAGG 60.025 54.545 0.00 0.00 40.04 3.69
46 47 3.367646 TCCACACTACTAGACCCAGAG 57.632 52.381 0.00 0.00 0.00 3.35
47 48 5.198965 GTTATCCACACTACTAGACCCAGA 58.801 45.833 0.00 0.00 0.00 3.86
48 49 4.341520 GGTTATCCACACTACTAGACCCAG 59.658 50.000 0.00 0.00 0.00 4.45
49 50 4.016851 AGGTTATCCACACTACTAGACCCA 60.017 45.833 0.00 0.00 35.89 4.51
50 51 4.544683 AGGTTATCCACACTACTAGACCC 58.455 47.826 0.00 0.00 35.89 4.46
51 52 5.771153 GAGGTTATCCACACTACTAGACC 57.229 47.826 0.00 0.00 35.89 3.85
95 96 4.365514 TTGGTTCTCTCAATGCCTGTAA 57.634 40.909 0.00 0.00 0.00 2.41
100 101 5.643379 TGTTAATTGGTTCTCTCAATGCC 57.357 39.130 0.00 0.00 35.31 4.40
104 105 7.978975 CCAAAGTTTGTTAATTGGTTCTCTCAA 59.021 33.333 14.36 0.00 37.99 3.02
132 133 1.672356 CTCACCCGTCAGCCCAAAG 60.672 63.158 0.00 0.00 0.00 2.77
137 138 1.021390 CATGTTCTCACCCGTCAGCC 61.021 60.000 0.00 0.00 0.00 4.85
144 145 1.541588 GCCTGTTTCATGTTCTCACCC 59.458 52.381 0.00 0.00 0.00 4.61
167 168 5.633830 AAATAAGAGTGCAAGTGGTCATG 57.366 39.130 0.00 0.00 0.00 3.07
194 648 4.365514 AGGTGATGTGTGAACAACCATA 57.634 40.909 5.15 0.00 0.00 2.74
203 657 2.029380 CGTGACCTAAGGTGATGTGTGA 60.029 50.000 0.00 0.00 35.25 3.58
225 679 4.507756 GGAAGAAACAAGGTTGTCAAATGC 59.492 41.667 0.00 0.00 41.31 3.56
226 680 5.659463 TGGAAGAAACAAGGTTGTCAAATG 58.341 37.500 0.00 0.00 41.31 2.32
227 681 5.163416 CCTGGAAGAAACAAGGTTGTCAAAT 60.163 40.000 0.00 0.00 36.71 2.32
228 682 4.159506 CCTGGAAGAAACAAGGTTGTCAAA 59.840 41.667 0.00 0.00 36.71 2.69
236 690 4.156739 GCATAGTTCCTGGAAGAAACAAGG 59.843 45.833 9.92 0.00 34.07 3.61
240 694 3.125316 CGTGCATAGTTCCTGGAAGAAAC 59.875 47.826 9.92 0.00 34.07 2.78
244 698 2.271800 GACGTGCATAGTTCCTGGAAG 58.728 52.381 9.92 0.00 0.00 3.46
250 704 3.071479 TGAAAAGGACGTGCATAGTTCC 58.929 45.455 10.52 0.00 0.00 3.62
261 715 1.266989 GGGACTTGCTTGAAAAGGACG 59.733 52.381 0.00 0.00 46.77 4.79
329 784 7.410174 ACTAGAGATGATATAAGAGGGGTCTG 58.590 42.308 0.00 0.00 0.00 3.51
356 812 2.565841 GTGATAGTTGGATGCAGGGTC 58.434 52.381 0.00 0.00 0.00 4.46
379 835 0.896226 ACGCTCCTAGGAGTTGGTTC 59.104 55.000 34.17 18.56 43.70 3.62
381 837 1.272313 TGTACGCTCCTAGGAGTTGGT 60.272 52.381 34.17 29.12 43.70 3.67
383 839 2.416972 GGTTGTACGCTCCTAGGAGTTG 60.417 54.545 34.17 28.49 43.70 3.16
385 841 1.472188 GGTTGTACGCTCCTAGGAGT 58.528 55.000 34.17 21.81 43.70 3.85
396 854 1.134487 CTGCAATGGCGGTTGTACG 59.866 57.895 0.00 0.00 45.35 3.67
405 863 0.895100 TCACTGGGAACTGCAATGGC 60.895 55.000 0.00 0.00 41.68 4.40
419 877 1.004918 GGTTCCCGTGGTCTCACTG 60.005 63.158 0.00 0.00 41.53 3.66
420 878 2.571216 CGGTTCCCGTGGTCTCACT 61.571 63.158 0.00 0.00 42.73 3.41
421 879 2.048503 CGGTTCCCGTGGTCTCAC 60.049 66.667 0.00 0.00 42.73 3.51
431 889 2.437002 TATTGCGGTGCGGTTCCC 60.437 61.111 0.00 0.00 0.00 3.97
432 890 2.757056 GGTATTGCGGTGCGGTTCC 61.757 63.158 0.00 0.00 0.00 3.62
433 891 2.789249 GGTATTGCGGTGCGGTTC 59.211 61.111 0.00 0.00 0.00 3.62
434 892 3.122323 CGGTATTGCGGTGCGGTT 61.122 61.111 0.00 0.00 0.00 4.44
437 895 3.560278 GACCGGTATTGCGGTGCG 61.560 66.667 7.34 0.00 38.78 5.34
438 896 3.560278 CGACCGGTATTGCGGTGC 61.560 66.667 7.34 0.00 38.78 5.01
439 897 3.560278 GCGACCGGTATTGCGGTG 61.560 66.667 7.34 0.00 38.78 4.94
440 898 4.825252 GGCGACCGGTATTGCGGT 62.825 66.667 7.34 0.00 41.71 5.68
441 899 4.823419 TGGCGACCGGTATTGCGG 62.823 66.667 7.34 0.00 0.00 5.69
442 900 3.560278 GTGGCGACCGGTATTGCG 61.560 66.667 7.34 8.32 0.00 4.85
443 901 3.560278 CGTGGCGACCGGTATTGC 61.560 66.667 7.34 12.69 0.00 3.56
444 902 3.560278 GCGTGGCGACCGGTATTG 61.560 66.667 7.34 0.88 0.00 1.90
458 916 4.314440 ATGGTGGTGTGCTCGCGT 62.314 61.111 5.77 0.00 0.00 6.01
459 917 3.792047 CATGGTGGTGTGCTCGCG 61.792 66.667 0.00 0.00 0.00 5.87
460 918 2.669569 ACATGGTGGTGTGCTCGC 60.670 61.111 0.00 0.00 0.00 5.03
461 919 3.256936 CACATGGTGGTGTGCTCG 58.743 61.111 0.00 0.00 42.51 5.03
466 924 1.529010 CCAGTGCACATGGTGGTGT 60.529 57.895 21.04 0.00 40.89 4.16
467 925 3.357919 CCAGTGCACATGGTGGTG 58.642 61.111 21.04 6.31 41.72 4.17
479 937 1.575922 CCGACACAATGCACCAGTG 59.424 57.895 12.02 12.02 39.12 3.66
480 938 1.600636 CCCGACACAATGCACCAGT 60.601 57.895 0.00 0.00 0.00 4.00
481 939 2.981560 GCCCGACACAATGCACCAG 61.982 63.158 0.00 0.00 0.00 4.00
482 940 2.983030 GCCCGACACAATGCACCA 60.983 61.111 0.00 0.00 0.00 4.17
483 941 4.101790 CGCCCGACACAATGCACC 62.102 66.667 0.00 0.00 0.00 5.01
537 995 3.755628 ACGATCGACCACACCGGG 61.756 66.667 24.34 0.00 40.22 5.73
547 1005 1.029681 CACCCTATCCACACGATCGA 58.970 55.000 24.34 0.00 31.92 3.59
548 1006 1.029681 TCACCCTATCCACACGATCG 58.970 55.000 14.88 14.88 31.92 3.69
549 1007 2.224066 CCTTCACCCTATCCACACGATC 60.224 54.545 0.00 0.00 31.92 3.69
550 1008 1.762957 CCTTCACCCTATCCACACGAT 59.237 52.381 0.00 0.00 34.73 3.73
576 1034 2.586357 GAGGACGAATCTGGCGCC 60.586 66.667 22.73 22.73 0.00 6.53
793 1251 0.955919 CTTGAGGTTTCCGTGGCCTC 60.956 60.000 3.32 0.00 46.61 4.70
817 1275 1.078709 TAGCTCGCACTTTGCATGTC 58.921 50.000 0.00 0.00 45.36 3.06
923 1382 1.742831 CCACGGACAAGAGAGAGAGAG 59.257 57.143 0.00 0.00 0.00 3.20
924 1383 1.827681 CCACGGACAAGAGAGAGAGA 58.172 55.000 0.00 0.00 0.00 3.10
983 1442 1.244816 GAGGTGTAGGTGGTTTTGGC 58.755 55.000 0.00 0.00 0.00 4.52
1026 1485 4.142359 GCTAAACTGCTAGACTGCTAGACA 60.142 45.833 4.23 1.74 45.71 3.41
1027 1486 4.097286 AGCTAAACTGCTAGACTGCTAGAC 59.903 45.833 4.23 0.00 45.71 2.59
1034 1493 1.751924 CCGGAGCTAAACTGCTAGACT 59.248 52.381 0.00 0.00 44.17 3.24
1096 1555 4.626081 GCAGTGGTGGCACGAGGT 62.626 66.667 12.17 0.00 0.00 3.85
1137 1596 4.452733 GGACAGGTCGAAGGCGGG 62.453 72.222 0.00 0.00 38.28 6.13
1558 2017 6.569127 TTTATCAGTTGGCTATTACCCAGA 57.431 37.500 0.00 0.00 33.13 3.86
1559 2018 7.823745 AATTTATCAGTTGGCTATTACCCAG 57.176 36.000 0.00 0.00 33.13 4.45
1560 2019 9.875708 ATTAATTTATCAGTTGGCTATTACCCA 57.124 29.630 0.00 0.00 0.00 4.51
1566 2025 9.812347 TGGATGATTAATTTATCAGTTGGCTAT 57.188 29.630 12.27 0.00 37.91 2.97
1569 2028 7.945134 ACTGGATGATTAATTTATCAGTTGGC 58.055 34.615 12.27 1.13 37.91 4.52
1590 2061 2.712709 TGGAGAAGAGAGACGTACTGG 58.287 52.381 0.00 0.00 0.00 4.00
1634 2108 6.256104 TGCAATTTTCAATGTGTATGCATAGC 59.744 34.615 6.67 3.99 37.61 2.97
1635 2109 7.758613 TGCAATTTTCAATGTGTATGCATAG 57.241 32.000 6.67 0.00 37.61 2.23
1640 2114 7.292292 CCAAGTTGCAATTTTCAATGTGTATG 58.708 34.615 0.59 0.00 0.00 2.39
1643 2117 4.575645 CCCAAGTTGCAATTTTCAATGTGT 59.424 37.500 0.59 0.00 0.00 3.72
1706 2180 4.222124 ACCATGTCGCCTAGAAAAATCT 57.778 40.909 0.00 0.00 0.00 2.40
1755 2249 7.977818 AGCCCAGTGAATACATGATTTATCTA 58.022 34.615 0.00 0.00 0.00 1.98
1756 2250 6.845908 AGCCCAGTGAATACATGATTTATCT 58.154 36.000 0.00 0.00 0.00 1.98
1757 2251 6.128445 CGAGCCCAGTGAATACATGATTTATC 60.128 42.308 0.00 0.00 0.00 1.75
1758 2252 5.702670 CGAGCCCAGTGAATACATGATTTAT 59.297 40.000 0.00 0.00 0.00 1.40
1759 2253 5.056480 CGAGCCCAGTGAATACATGATTTA 58.944 41.667 0.00 0.00 0.00 1.40
1760 2254 3.879295 CGAGCCCAGTGAATACATGATTT 59.121 43.478 0.00 0.00 0.00 2.17
1761 2255 3.470709 CGAGCCCAGTGAATACATGATT 58.529 45.455 0.00 0.00 0.00 2.57
1762 2256 2.808202 GCGAGCCCAGTGAATACATGAT 60.808 50.000 0.00 0.00 0.00 2.45
1763 2257 1.473257 GCGAGCCCAGTGAATACATGA 60.473 52.381 0.00 0.00 0.00 3.07
1764 2258 0.940126 GCGAGCCCAGTGAATACATG 59.060 55.000 0.00 0.00 0.00 3.21
1813 2316 2.809174 CCGTGCGCGATCTTGTCA 60.809 61.111 23.45 0.00 41.33 3.58
2122 2630 5.510671 TCTTCGAAAGCAAATCAAGTGAAC 58.489 37.500 0.00 0.00 0.00 3.18
2127 2635 5.979517 ACCTTTTCTTCGAAAGCAAATCAAG 59.020 36.000 0.00 0.00 35.73 3.02
2167 2676 2.202919 CGGGCGAGACATGCATCA 60.203 61.111 0.00 0.00 0.00 3.07
2174 2683 4.961511 GCACACACGGGCGAGACA 62.962 66.667 0.00 0.00 0.00 3.41
2208 2720 1.299089 TCACACTCACGCAGTCACG 60.299 57.895 0.00 0.00 41.61 4.35
2210 2722 1.067416 GGTCACACTCACGCAGTCA 59.933 57.895 0.00 0.00 41.61 3.41
2213 2725 2.027605 ACGGTCACACTCACGCAG 59.972 61.111 0.00 0.00 0.00 5.18
2215 2727 2.027024 TCACGGTCACACTCACGC 59.973 61.111 0.00 0.00 0.00 5.34
2216 2728 0.934901 CAGTCACGGTCACACTCACG 60.935 60.000 0.00 0.00 0.00 4.35
2248 2760 0.953727 TCAACTTGCATGTCCACTGC 59.046 50.000 5.61 0.00 40.10 4.40
2253 2765 0.517316 GGTCGTCAACTTGCATGTCC 59.483 55.000 5.61 0.00 0.00 4.02
2361 2873 5.335127 GTTTGATCCATGATGTAACTGTGC 58.665 41.667 0.00 0.00 0.00 4.57
2362 2874 5.351189 TCGTTTGATCCATGATGTAACTGTG 59.649 40.000 0.00 0.00 0.00 3.66
2387 2905 4.386951 CGTGACCGGCCATGGTGA 62.387 66.667 14.67 0.00 44.01 4.02
2429 2947 5.484173 AGTTGTATGTAACGAATGGCATG 57.516 39.130 0.00 0.00 35.73 4.06
2481 3005 6.602406 AGCTGAAATTTGTCTGCTCAGATTAT 59.398 34.615 2.62 0.00 46.31 1.28
2522 3047 1.273327 CCTCAATGCACCCCTTCAAAC 59.727 52.381 0.00 0.00 0.00 2.93
2668 3194 0.693049 ACAAGCCGGAGACCTTGAAT 59.307 50.000 21.76 2.55 38.36 2.57
2687 3214 2.070783 GGATCGCAACGGTAAGTGAAA 58.929 47.619 1.68 0.00 0.00 2.69
2701 3228 1.801178 GCCTAAAGTAGCATGGATCGC 59.199 52.381 0.00 0.00 0.00 4.58
2742 3274 4.005650 GCATCAGTTTGGAGAAGATGACA 58.994 43.478 0.00 0.00 38.62 3.58
2772 3304 1.312815 GCAGGCCGATAAAATCTGCT 58.687 50.000 0.00 0.00 45.03 4.24
2793 3325 3.576356 CCTTGCGCGATTCGGCAT 61.576 61.111 12.10 0.00 38.94 4.40
2893 3443 5.405935 AAAGTTTGTGCAAAAAGGACTCT 57.594 34.783 1.16 0.00 39.64 3.24
2894 3444 6.147000 TCAAAAAGTTTGTGCAAAAAGGACTC 59.853 34.615 1.16 0.00 39.64 3.36
2895 3445 5.994668 TCAAAAAGTTTGTGCAAAAAGGACT 59.005 32.000 1.16 0.00 39.64 3.85
2896 3446 6.234723 TCAAAAAGTTTGTGCAAAAAGGAC 57.765 33.333 1.16 0.00 39.32 3.85
2898 3448 5.088068 GCTCAAAAAGTTTGTGCAAAAAGG 58.912 37.500 18.03 0.00 38.40 3.11
2899 3449 5.687828 TGCTCAAAAAGTTTGTGCAAAAAG 58.312 33.333 21.51 4.25 43.21 2.27
2905 3455 4.567959 ACAGAATGCTCAAAAAGTTTGTGC 59.432 37.500 16.74 16.74 42.53 4.57
2908 3458 6.310956 TCAACACAGAATGCTCAAAAAGTTTG 59.689 34.615 0.00 0.00 42.53 2.93
2909 3459 6.397272 TCAACACAGAATGCTCAAAAAGTTT 58.603 32.000 0.00 0.00 42.53 2.66
2910 3460 5.964758 TCAACACAGAATGCTCAAAAAGTT 58.035 33.333 0.00 0.00 42.53 2.66
2912 3462 6.210796 TGATCAACACAGAATGCTCAAAAAG 58.789 36.000 0.00 0.00 42.53 2.27
2913 3463 6.146601 TGATCAACACAGAATGCTCAAAAA 57.853 33.333 0.00 0.00 42.53 1.94
2915 3465 5.771153 TTGATCAACACAGAATGCTCAAA 57.229 34.783 3.38 0.00 42.53 2.69
2916 3466 5.242171 ACATTGATCAACACAGAATGCTCAA 59.758 36.000 11.07 0.00 42.53 3.02
2918 3468 5.106436 TGACATTGATCAACACAGAATGCTC 60.106 40.000 11.07 4.86 42.53 4.26
2919 3469 4.763279 TGACATTGATCAACACAGAATGCT 59.237 37.500 11.07 0.00 42.53 3.79
2920 3470 5.050644 TGACATTGATCAACACAGAATGC 57.949 39.130 11.07 1.19 42.53 3.56
2921 3471 5.515270 GCATGACATTGATCAACACAGAATG 59.485 40.000 11.07 10.91 35.13 2.67
2937 3538 4.226427 ACTCACTACCAATGCATGACAT 57.774 40.909 0.00 0.00 42.30 3.06
2938 3539 3.701205 ACTCACTACCAATGCATGACA 57.299 42.857 0.00 0.00 0.00 3.58
2940 3541 5.555966 TGTTTACTCACTACCAATGCATGA 58.444 37.500 0.00 0.00 0.00 3.07
2941 3542 5.878332 TGTTTACTCACTACCAATGCATG 57.122 39.130 0.00 0.00 0.00 4.06
2942 3543 7.992608 TCATATGTTTACTCACTACCAATGCAT 59.007 33.333 1.90 0.00 0.00 3.96
2943 3544 7.279981 GTCATATGTTTACTCACTACCAATGCA 59.720 37.037 1.90 0.00 0.00 3.96
2944 3545 7.279981 TGTCATATGTTTACTCACTACCAATGC 59.720 37.037 1.90 0.00 0.00 3.56
2945 3546 8.716646 TGTCATATGTTTACTCACTACCAATG 57.283 34.615 1.90 0.00 0.00 2.82
2946 3547 8.758829 TCTGTCATATGTTTACTCACTACCAAT 58.241 33.333 1.90 0.00 0.00 3.16
2948 3549 7.712204 TCTGTCATATGTTTACTCACTACCA 57.288 36.000 1.90 0.00 0.00 3.25
2954 3555 8.864087 AGCAGATATCTGTCATATGTTTACTCA 58.136 33.333 28.92 0.00 45.45 3.41
2955 3556 9.352784 GAGCAGATATCTGTCATATGTTTACTC 57.647 37.037 28.92 18.90 45.45 2.59
2960 3561 6.269538 ACCTGAGCAGATATCTGTCATATGTT 59.730 38.462 28.92 12.92 45.45 2.71
2961 3562 5.779260 ACCTGAGCAGATATCTGTCATATGT 59.221 40.000 28.92 21.77 45.45 2.29
2962 3563 6.283544 ACCTGAGCAGATATCTGTCATATG 57.716 41.667 28.92 21.32 45.45 1.78
2963 3564 6.699366 CAACCTGAGCAGATATCTGTCATAT 58.301 40.000 28.92 18.52 45.45 1.78
2964 3565 5.510349 GCAACCTGAGCAGATATCTGTCATA 60.510 44.000 28.92 14.89 45.45 2.15
2965 3566 4.743045 GCAACCTGAGCAGATATCTGTCAT 60.743 45.833 28.92 17.76 45.45 3.06
2966 3567 3.431346 GCAACCTGAGCAGATATCTGTCA 60.431 47.826 28.92 26.17 45.45 3.58
2967 3568 3.129871 GCAACCTGAGCAGATATCTGTC 58.870 50.000 28.92 23.80 45.45 3.51
2968 3569 2.770802 AGCAACCTGAGCAGATATCTGT 59.229 45.455 28.92 17.99 45.45 3.41
2969 3570 3.472283 AGCAACCTGAGCAGATATCTG 57.528 47.619 25.64 25.64 46.40 2.90
2970 3571 4.197750 CAAAGCAACCTGAGCAGATATCT 58.802 43.478 0.00 0.00 0.00 1.98
2971 3572 3.944015 ACAAAGCAACCTGAGCAGATATC 59.056 43.478 0.00 0.00 0.00 1.63
2972 3573 3.960571 ACAAAGCAACCTGAGCAGATAT 58.039 40.909 0.00 0.00 0.00 1.63
2973 3574 3.423539 ACAAAGCAACCTGAGCAGATA 57.576 42.857 0.00 0.00 0.00 1.98
2974 3575 2.283145 ACAAAGCAACCTGAGCAGAT 57.717 45.000 0.00 0.00 0.00 2.90
2975 3576 2.928801 TACAAAGCAACCTGAGCAGA 57.071 45.000 0.00 0.00 0.00 4.26
2976 3577 4.510038 AATTACAAAGCAACCTGAGCAG 57.490 40.909 0.00 0.00 0.00 4.24
2984 3585 6.852664 AGCACCAGTATAATTACAAAGCAAC 58.147 36.000 0.00 0.00 0.00 4.17
2993 3594 5.071788 CCCTGAGGAAGCACCAGTATAATTA 59.928 44.000 0.00 0.00 42.04 1.40
2998 3599 1.207791 CCCTGAGGAAGCACCAGTAT 58.792 55.000 0.00 0.00 42.04 2.12
3000 3601 1.152030 TCCCTGAGGAAGCACCAGT 60.152 57.895 0.00 0.00 40.08 4.00
3011 3612 0.675837 TCCACGACGTACTCCCTGAG 60.676 60.000 0.00 0.00 35.52 3.35
3025 3626 3.103911 GCAACGACGAGGTCCACG 61.104 66.667 7.20 7.20 0.00 4.94
3040 3641 4.478371 CAGATGCTCCCTGGCGCA 62.478 66.667 10.83 2.94 40.24 6.09
3042 3643 4.478371 TGCAGATGCTCCCTGGCG 62.478 66.667 6.35 0.00 42.66 5.69
3060 3661 0.741221 GTTGATGGACGAGTCTGGGC 60.741 60.000 3.09 0.00 0.00 5.36
3082 3683 1.448189 CACAGAGGAGAGCAGCTGC 60.448 63.158 31.53 31.53 42.49 5.25
3127 3728 2.390938 GCGTAGTTTTCCAAACTTGCC 58.609 47.619 7.17 0.00 0.00 4.52
3154 3755 2.332654 ACGATTCCAAGCCGCAACC 61.333 57.895 0.00 0.00 0.00 3.77
3200 3801 7.768120 ACCTGAATATTGAGAATCTGAGAACAC 59.232 37.037 3.19 0.00 34.92 3.32
3238 3839 7.166851 GCTCATCTGCATGGCCTATATATATT 58.833 38.462 3.32 0.00 0.00 1.28
3240 3841 5.603813 TGCTCATCTGCATGGCCTATATATA 59.396 40.000 3.32 0.00 38.12 0.86
3241 3842 4.411212 TGCTCATCTGCATGGCCTATATAT 59.589 41.667 3.32 0.00 38.12 0.86
3242 3843 3.776417 TGCTCATCTGCATGGCCTATATA 59.224 43.478 3.32 0.00 38.12 0.86
3243 3844 2.574824 TGCTCATCTGCATGGCCTATAT 59.425 45.455 3.32 0.00 38.12 0.86
3244 3845 1.980036 TGCTCATCTGCATGGCCTATA 59.020 47.619 3.32 0.00 38.12 1.31
3261 3884 6.824553 ACAGTACATGATCAATCAGTATGCT 58.175 36.000 0.00 0.00 40.64 3.79
3262 3885 7.148672 GCTACAGTACATGATCAATCAGTATGC 60.149 40.741 0.00 0.00 40.64 3.14
3275 3898 2.673893 CGGCAACTGCTACAGTACATGA 60.674 50.000 0.00 0.00 44.62 3.07
3277 3900 1.405526 CCGGCAACTGCTACAGTACAT 60.406 52.381 0.00 0.00 44.62 2.29
3284 3907 2.436115 GTCCCCGGCAACTGCTAC 60.436 66.667 0.00 0.00 41.70 3.58
3316 3939 0.593128 GACCGCATTTTGTGTCTGCT 59.407 50.000 0.00 0.00 33.75 4.24
3325 3948 0.527565 GCATGACCTGACCGCATTTT 59.472 50.000 0.00 0.00 0.00 1.82
3394 4035 2.792947 GCCGACCTCCATCGCCTTA 61.793 63.158 0.00 0.00 40.87 2.69
3420 4061 4.878397 CAGGGATGTTCTCCTTATTGACAC 59.122 45.833 0.00 0.00 44.28 3.67
3565 4206 6.016024 ACAGAATGCAGCAAGTTGATAAGAAA 60.016 34.615 7.16 0.00 42.53 2.52
3615 4256 3.766545 ACAGTACCAAATGAACCTGCAT 58.233 40.909 0.00 0.00 0.00 3.96
3625 4266 5.581085 GTCAGCTCGATAAACAGTACCAAAT 59.419 40.000 0.00 0.00 0.00 2.32
3634 4275 1.275010 TGCCAGTCAGCTCGATAAACA 59.725 47.619 0.00 0.00 0.00 2.83
3670 4311 5.546499 AGGTTTCCATAGTGAAAGGTCTACA 59.454 40.000 0.00 0.00 35.04 2.74
3671 4312 6.051179 AGGTTTCCATAGTGAAAGGTCTAC 57.949 41.667 0.00 0.00 35.04 2.59
3758 4399 7.361713 GCACTTTTACTGCAACATCCTACATAA 60.362 37.037 0.00 0.00 34.56 1.90
3872 4514 6.927936 CAGATTGAGATCCATACTAACCACAG 59.072 42.308 0.00 0.00 32.44 3.66
3874 4516 6.821388 ACAGATTGAGATCCATACTAACCAC 58.179 40.000 0.00 0.00 32.44 4.16
3905 4547 4.022935 TCAACAATGTGCCAAGCTAAAGAG 60.023 41.667 0.00 0.00 0.00 2.85
3927 4569 6.283544 TCATGATAGAGATCTGCAAGGATC 57.716 41.667 0.00 7.67 41.55 3.36
3977 4619 2.292267 GGTCACTGCACCCATGAATAG 58.708 52.381 0.00 0.00 0.00 1.73
3988 4630 2.267351 CGGGCATTTGGTCACTGCA 61.267 57.895 6.92 0.00 37.64 4.41
4024 4666 2.039348 GGTTTACCTGGGCAAGTACTCA 59.961 50.000 0.00 0.00 0.00 3.41
4063 4705 4.627035 GTGCAGGGAATTAGTTCATTTTGC 59.373 41.667 0.03 4.77 36.01 3.68
4065 4707 4.837860 TGGTGCAGGGAATTAGTTCATTTT 59.162 37.500 0.03 0.00 36.01 1.82
4066 4708 4.415596 TGGTGCAGGGAATTAGTTCATTT 58.584 39.130 0.03 0.00 36.01 2.32
4067 4709 4.046286 TGGTGCAGGGAATTAGTTCATT 57.954 40.909 0.03 0.00 36.01 2.57
4072 4714 3.157087 CTGTTTGGTGCAGGGAATTAGT 58.843 45.455 0.00 0.00 0.00 2.24
4086 4728 5.651139 AGGATGATTCAGTGATTCTGTTTGG 59.349 40.000 14.41 0.00 43.97 3.28
4098 4740 3.244665 TGTTCACAGCAGGATGATTCAGT 60.245 43.478 0.00 0.00 39.69 3.41
4106 4748 0.617413 CCCTCTGTTCACAGCAGGAT 59.383 55.000 19.23 0.00 43.46 3.24
4108 4750 0.036577 CTCCCTCTGTTCACAGCAGG 60.037 60.000 14.10 14.10 43.46 4.85
4109 4751 0.673022 GCTCCCTCTGTTCACAGCAG 60.673 60.000 1.74 1.61 43.46 4.24
4155 4797 6.350906 CCGTAAATCAAGTATTTCCCCACTA 58.649 40.000 0.00 0.00 38.71 2.74
4223 4865 5.236047 GGAGCATGCTTATCTGTAGAAGTTG 59.764 44.000 23.61 0.00 0.00 3.16
4260 4902 7.463544 TGCTTCATATAACATTCAGTGAAACG 58.536 34.615 10.14 6.87 45.86 3.60
4263 4905 7.916977 GCAATGCTTCATATAACATTCAGTGAA 59.083 33.333 8.27 8.27 30.54 3.18
4266 4908 7.067859 ACAGCAATGCTTCATATAACATTCAGT 59.932 33.333 4.36 0.00 36.40 3.41
4275 4917 4.779696 TGGTCACAGCAATGCTTCATATA 58.220 39.130 4.36 0.00 36.40 0.86
4296 4938 0.179078 TGCCTTTTGCCTGCAGTTTG 60.179 50.000 13.81 0.00 40.16 2.93
4297 4939 0.760572 ATGCCTTTTGCCTGCAGTTT 59.239 45.000 13.81 0.00 38.58 2.66
4300 4942 0.319083 TTGATGCCTTTTGCCTGCAG 59.681 50.000 6.78 6.78 38.58 4.41
4347 4989 4.080863 GGTGTCTTCAGATCCCAATGTACT 60.081 45.833 0.00 0.00 0.00 2.73
4398 5040 6.796705 AATGAACTCCAACTAACCTTTACG 57.203 37.500 0.00 0.00 0.00 3.18
4440 5082 1.841450 CAGAAGAGCCGTATTCGACC 58.159 55.000 0.00 0.00 39.71 4.79
4441 5083 1.201343 GCAGAAGAGCCGTATTCGAC 58.799 55.000 0.00 0.00 39.71 4.20
4449 5091 0.519077 GGACAAAAGCAGAAGAGCCG 59.481 55.000 0.00 0.00 34.23 5.52
4546 5188 2.290260 TGTTCCAGCGACTGATTTGGAT 60.290 45.455 8.20 0.00 39.33 3.41
4586 5228 4.582869 TGGCGAGTTACTAACTGAGTAGA 58.417 43.478 6.17 0.00 43.03 2.59
4589 5231 4.803098 AATGGCGAGTTACTAACTGAGT 57.197 40.909 6.17 0.00 43.03 3.41
4604 5246 5.894807 AGAATCCAAAAAGATGTAATGGCG 58.105 37.500 0.00 0.00 0.00 5.69
4645 5287 2.646930 CATCCATTCTGGCTGCAGTTA 58.353 47.619 16.64 3.64 37.47 2.24
4722 5364 0.106708 GCTCCCATAAGATCACGCCA 59.893 55.000 0.00 0.00 0.00 5.69
4846 5501 7.310299 GCCCCTACTACCTGTAAATATTACTCC 60.310 44.444 2.35 0.00 0.00 3.85
4897 5552 2.507407 TGGTGTCTTTAGGGATTGGC 57.493 50.000 0.00 0.00 0.00 4.52
4906 5561 2.551270 AGCTCTGGGATGGTGTCTTTA 58.449 47.619 0.00 0.00 0.00 1.85
4924 5579 2.354199 GGATTCAACAAGAGCAGCTAGC 59.646 50.000 6.62 6.62 46.19 3.42
4952 5607 5.415701 GTCATGGGAAATTTGCTTACTCAGA 59.584 40.000 9.70 0.00 0.00 3.27
4980 5635 4.588106 TGAAATTTTGATCAAGGTGGCTGA 59.412 37.500 8.41 0.00 0.00 4.26
5014 5669 7.696992 TTTAAACTTAGGCTGAACTAATGGG 57.303 36.000 0.00 0.00 32.88 4.00
5031 5686 9.912634 ATCGATGATGATGTTTTGTTTTAAACT 57.087 25.926 9.33 0.00 38.52 2.66
5053 5708 8.958175 AAAATAAAGCAAAATCGTGTTATCGA 57.042 26.923 0.00 0.00 43.86 3.59
5056 5711 9.691362 ACTGAAAATAAAGCAAAATCGTGTTAT 57.309 25.926 0.00 0.00 0.00 1.89
5157 5812 0.034756 CACGGGACTGTCATGAACCA 59.965 55.000 10.38 0.00 0.00 3.67
5175 5830 3.119245 GCATCGTCTTAGAGTAACACCCA 60.119 47.826 0.00 0.00 0.00 4.51
5177 5832 4.106029 TGCATCGTCTTAGAGTAACACC 57.894 45.455 0.00 0.00 0.00 4.16
5178 5833 4.559251 CACTGCATCGTCTTAGAGTAACAC 59.441 45.833 0.00 0.00 0.00 3.32
5179 5834 4.457949 TCACTGCATCGTCTTAGAGTAACA 59.542 41.667 0.00 0.00 0.00 2.41
5180 5835 4.982999 TCACTGCATCGTCTTAGAGTAAC 58.017 43.478 0.00 0.00 0.00 2.50
5181 5836 5.221067 GGATCACTGCATCGTCTTAGAGTAA 60.221 44.000 0.00 0.00 0.00 2.24
5182 5837 4.276183 GGATCACTGCATCGTCTTAGAGTA 59.724 45.833 0.00 0.00 0.00 2.59
5183 5838 3.067461 GGATCACTGCATCGTCTTAGAGT 59.933 47.826 0.00 0.00 0.00 3.24
5184 5839 3.637432 GGATCACTGCATCGTCTTAGAG 58.363 50.000 0.00 0.00 0.00 2.43
5185 5840 2.033424 CGGATCACTGCATCGTCTTAGA 59.967 50.000 0.00 0.00 0.00 2.10
5186 5841 2.389059 CGGATCACTGCATCGTCTTAG 58.611 52.381 0.00 0.00 0.00 2.18
5187 5842 1.067060 CCGGATCACTGCATCGTCTTA 59.933 52.381 0.00 0.00 0.00 2.10
5188 5843 0.179100 CCGGATCACTGCATCGTCTT 60.179 55.000 0.00 0.00 0.00 3.01
5189 5844 1.323271 ACCGGATCACTGCATCGTCT 61.323 55.000 9.46 0.00 0.00 4.18
5190 5845 0.460284 AACCGGATCACTGCATCGTC 60.460 55.000 9.46 0.00 0.00 4.20
5191 5846 0.460284 GAACCGGATCACTGCATCGT 60.460 55.000 9.46 0.00 0.00 3.73
5192 5847 0.460109 TGAACCGGATCACTGCATCG 60.460 55.000 10.84 0.00 0.00 3.84
5193 5848 1.600957 CATGAACCGGATCACTGCATC 59.399 52.381 17.55 0.00 30.82 3.91
5194 5849 1.210234 TCATGAACCGGATCACTGCAT 59.790 47.619 17.55 0.00 30.82 3.96
5195 5850 0.612744 TCATGAACCGGATCACTGCA 59.387 50.000 17.55 0.00 30.82 4.41
5196 5851 1.009829 GTCATGAACCGGATCACTGC 58.990 55.000 17.55 6.06 30.82 4.40
5197 5852 2.274437 CTGTCATGAACCGGATCACTG 58.726 52.381 17.55 15.34 30.82 3.66
5198 5853 1.902508 ACTGTCATGAACCGGATCACT 59.097 47.619 17.55 3.80 30.82 3.41
5199 5854 2.271800 GACTGTCATGAACCGGATCAC 58.728 52.381 17.55 5.21 30.82 3.06
5200 5855 1.135112 CGACTGTCATGAACCGGATCA 60.135 52.381 17.51 17.51 0.00 2.92
5201 5856 1.134367 TCGACTGTCATGAACCGGATC 59.866 52.381 9.46 6.62 0.00 3.36
5202 5857 1.182667 TCGACTGTCATGAACCGGAT 58.817 50.000 9.46 0.00 0.00 4.18
5203 5858 1.182667 ATCGACTGTCATGAACCGGA 58.817 50.000 9.46 0.00 0.00 5.14
5204 5859 1.927174 GAATCGACTGTCATGAACCGG 59.073 52.381 8.73 0.00 0.00 5.28
5205 5860 2.881074 AGAATCGACTGTCATGAACCG 58.119 47.619 8.73 0.00 0.00 4.44
5206 5861 3.372206 CCAAGAATCGACTGTCATGAACC 59.628 47.826 8.73 0.00 0.00 3.62
5207 5862 3.181516 GCCAAGAATCGACTGTCATGAAC 60.182 47.826 8.73 0.00 0.00 3.18
5208 5863 3.002791 GCCAAGAATCGACTGTCATGAA 58.997 45.455 8.73 0.00 0.00 2.57
5209 5864 2.621338 GCCAAGAATCGACTGTCATGA 58.379 47.619 8.73 0.00 0.00 3.07
5210 5865 1.667724 GGCCAAGAATCGACTGTCATG 59.332 52.381 8.73 0.00 0.00 3.07
5211 5866 1.740380 CGGCCAAGAATCGACTGTCAT 60.740 52.381 2.24 0.00 0.00 3.06
5212 5867 0.389817 CGGCCAAGAATCGACTGTCA 60.390 55.000 2.24 0.00 0.00 3.58
5213 5868 1.084370 CCGGCCAAGAATCGACTGTC 61.084 60.000 2.24 0.00 0.00 3.51
5214 5869 1.079127 CCGGCCAAGAATCGACTGT 60.079 57.895 2.24 0.00 0.00 3.55
5215 5870 2.464459 GCCGGCCAAGAATCGACTG 61.464 63.158 18.11 0.00 0.00 3.51
5216 5871 2.125106 GCCGGCCAAGAATCGACT 60.125 61.111 18.11 0.00 0.00 4.18
5217 5872 3.202706 GGCCGGCCAAGAATCGAC 61.203 66.667 40.73 8.62 35.81 4.20
5218 5873 3.711814 TGGCCGGCCAAGAATCGA 61.712 61.111 45.50 20.75 44.12 3.59
5270 5927 7.158099 ACTAATTCCTTATTCCTTGTTGTGC 57.842 36.000 0.00 0.00 0.00 4.57
5296 5956 1.289160 CCTCCCATGTTCCTTGAGGA 58.711 55.000 0.00 0.00 44.34 3.71
5297 5957 0.257039 CCCTCCCATGTTCCTTGAGG 59.743 60.000 0.00 0.00 41.84 3.86
5298 5958 0.995024 ACCCTCCCATGTTCCTTGAG 59.005 55.000 0.00 0.00 0.00 3.02
5299 5959 2.196595 CTACCCTCCCATGTTCCTTGA 58.803 52.381 0.00 0.00 0.00 3.02
5300 5960 1.408822 GCTACCCTCCCATGTTCCTTG 60.409 57.143 0.00 0.00 0.00 3.61
5301 5961 0.919710 GCTACCCTCCCATGTTCCTT 59.080 55.000 0.00 0.00 0.00 3.36
5302 5962 0.044855 AGCTACCCTCCCATGTTCCT 59.955 55.000 0.00 0.00 0.00 3.36
5303 5963 0.181350 CAGCTACCCTCCCATGTTCC 59.819 60.000 0.00 0.00 0.00 3.62
5304 5964 1.139853 CTCAGCTACCCTCCCATGTTC 59.860 57.143 0.00 0.00 0.00 3.18
5305 5965 1.207791 CTCAGCTACCCTCCCATGTT 58.792 55.000 0.00 0.00 0.00 2.71
5311 5974 3.225235 CTGCCTCAGCTACCCTCC 58.775 66.667 0.00 0.00 40.80 4.30
5324 5987 2.025418 GCATTGCACTTGTGCTGCC 61.025 57.895 23.53 9.43 36.02 4.85
5359 6023 3.244561 ACATGAATGGTCAGGAAACGAGT 60.245 43.478 0.00 0.00 37.78 4.18
5436 6100 8.777413 CACATTCAGGACATTATACATAACCAG 58.223 37.037 0.00 0.00 0.00 4.00
5447 6111 8.862325 ACTATTTTGACACATTCAGGACATTA 57.138 30.769 0.00 0.00 34.94 1.90
5486 6150 3.241067 TCTAAAGTGACGGCGCTATTT 57.759 42.857 3.85 0.00 33.70 1.40
5534 6198 3.627395 AGGATCATGTGAGCGGTTAAA 57.373 42.857 0.00 0.00 0.00 1.52
5535 6199 4.631131 CATAGGATCATGTGAGCGGTTAA 58.369 43.478 0.00 0.00 0.00 2.01
5540 6204 2.067013 CAGCATAGGATCATGTGAGCG 58.933 52.381 8.40 0.00 0.00 5.03
5556 6220 2.673775 TGGAAATTGGGAACTCAGCA 57.326 45.000 0.00 0.00 0.00 4.41
5672 6341 1.071385 CCAGTATGATGCTCCCCTGTC 59.929 57.143 0.00 0.00 39.69 3.51
5673 6342 1.135094 CCAGTATGATGCTCCCCTGT 58.865 55.000 0.00 0.00 39.69 4.00
5696 6365 7.338440 TGCTAAAATCGATGAGATATGTTCG 57.662 36.000 0.00 0.00 38.98 3.95
5712 6381 3.375299 GGACTGCTTGACGATGCTAAAAT 59.625 43.478 0.00 0.00 0.00 1.82
5763 6432 1.730446 GCGTTCTCCTTGCTGAAATGC 60.730 52.381 0.00 0.00 0.00 3.56
5827 6496 7.496591 GTCCGTGATATTAGTATTTTGTCCCAA 59.503 37.037 0.00 0.00 0.00 4.12
5843 6512 4.087182 CCCATGTAGGTAGTCCGTGATAT 58.913 47.826 0.00 0.00 39.05 1.63
5909 6578 5.509501 CCTGCAAAACACTGTGGATATTGTT 60.510 40.000 13.09 0.00 33.59 2.83
5933 6602 0.525029 GCTCGAGCGGGTAGTGTAAC 60.525 60.000 23.61 0.00 0.00 2.50
6066 6735 5.028549 ACTCCTTATGTTGGCAGATACAG 57.971 43.478 0.00 0.00 0.00 2.74
6134 6803 7.814642 ACATAACCATATGCGTACTAGTAGAC 58.185 38.462 1.87 0.00 42.26 2.59
6136 6805 7.813645 TGACATAACCATATGCGTACTAGTAG 58.186 38.462 1.87 0.00 42.26 2.57
6137 6806 7.446319 ACTGACATAACCATATGCGTACTAGTA 59.554 37.037 0.00 0.00 42.26 1.82
6138 6807 6.264744 ACTGACATAACCATATGCGTACTAGT 59.735 38.462 0.00 0.00 42.26 2.57
6139 6808 6.678878 ACTGACATAACCATATGCGTACTAG 58.321 40.000 0.00 0.00 42.26 2.57
6140 6809 6.644248 ACTGACATAACCATATGCGTACTA 57.356 37.500 0.00 0.00 42.26 1.82
6226 6895 4.034048 GTGAATCGTTGGCGTCTGAATAAT 59.966 41.667 0.00 0.00 39.49 1.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.