Multiple sequence alignment - TraesCS2A01G423000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G423000 chr2A 100.000 3409 0 0 1 3409 678116007 678119415 0.000000e+00 6296.0
1 TraesCS2A01G423000 chr2A 98.785 494 6 0 2916 3409 57911156 57911649 0.000000e+00 880.0
2 TraesCS2A01G423000 chr2A 90.672 461 30 5 130 578 503472991 503473450 4.870000e-168 601.0
3 TraesCS2A01G423000 chr2A 89.677 465 32 6 130 578 692582350 692582814 2.280000e-161 579.0
4 TraesCS2A01G423000 chr2A 84.856 416 49 11 2405 2818 678139311 678139714 1.140000e-109 407.0
5 TraesCS2A01G423000 chr2A 94.697 132 7 0 1 132 1632931 1632800 4.460000e-49 206.0
6 TraesCS2A01G423000 chr2A 84.080 201 32 0 1023 1223 678039234 678039034 9.650000e-46 195.0
7 TraesCS2A01G423000 chr2A 81.982 222 38 2 1000 1220 678074965 678075185 1.620000e-43 187.0
8 TraesCS2A01G423000 chr2B 91.566 2324 135 26 613 2917 636089204 636091485 0.000000e+00 3149.0
9 TraesCS2A01G423000 chr2B 86.825 630 46 11 6 611 476379484 476380100 0.000000e+00 669.0
10 TraesCS2A01G423000 chr2B 82.000 200 34 1 1023 1220 636003763 636003962 5.850000e-38 169.0
11 TraesCS2A01G423000 chr2B 80.800 125 24 0 1043 1167 634663054 634663178 7.790000e-17 99.0
12 TraesCS2A01G423000 chr2B 100.000 28 0 0 584 611 77535157 77535130 6.000000e-03 52.8
13 TraesCS2A01G423000 chr2D 94.873 1931 74 11 613 2531 534734291 534736208 0.000000e+00 2994.0
14 TraesCS2A01G423000 chr2D 77.432 1316 233 40 1043 2320 534527041 534525752 0.000000e+00 726.0
15 TraesCS2A01G423000 chr2D 76.183 1331 236 47 1043 2320 534483903 534485205 8.030000e-176 627.0
16 TraesCS2A01G423000 chr2D 78.070 456 64 17 11 461 165481262 165480838 4.370000e-64 255.0
17 TraesCS2A01G423000 chr2D 88.742 151 15 2 2765 2913 534737045 534737195 2.090000e-42 183.0
18 TraesCS2A01G423000 chr2D 81.910 199 34 2 1023 1220 534728463 534728660 2.100000e-37 167.0
19 TraesCS2A01G423000 chr2D 86.957 69 9 0 1435 1503 533994916 533994984 1.010000e-10 78.7
20 TraesCS2A01G423000 chr5A 93.590 624 26 5 1 611 70487200 70486578 0.000000e+00 918.0
21 TraesCS2A01G423000 chr7A 98.798 499 6 0 2911 3409 299574213 299573715 0.000000e+00 889.0
22 TraesCS2A01G423000 chr7A 93.042 618 26 6 1 602 634897589 634898205 0.000000e+00 887.0
23 TraesCS2A01G423000 chr7A 95.455 132 4 1 1 132 19552838 19552709 3.450000e-50 209.0
24 TraesCS2A01G423000 chr7A 95.349 129 6 0 1 129 260315527 260315655 4.460000e-49 206.0
25 TraesCS2A01G423000 chr1B 98.785 494 6 0 2916 3409 611160210 611159717 0.000000e+00 880.0
26 TraesCS2A01G423000 chr1B 97.368 494 13 0 2916 3409 682086789 682087282 0.000000e+00 841.0
27 TraesCS2A01G423000 chr1B 85.484 62 6 3 559 618 682972702 682972762 1.020000e-05 62.1
28 TraesCS2A01G423000 chr3B 98.178 494 9 0 2916 3409 259376101 259376594 0.000000e+00 863.0
29 TraesCS2A01G423000 chr3B 97.571 494 12 0 2916 3409 245014191 245013698 0.000000e+00 846.0
30 TraesCS2A01G423000 chr4D 97.773 494 11 0 2916 3409 281197466 281197959 0.000000e+00 852.0
31 TraesCS2A01G423000 chr4B 97.368 494 13 0 2916 3409 637601401 637600908 0.000000e+00 841.0
32 TraesCS2A01G423000 chr4B 86.603 627 41 16 7 604 575856189 575855577 0.000000e+00 652.0
33 TraesCS2A01G423000 chr4B 85.804 634 46 17 1 604 575831232 575830613 1.730000e-177 632.0
34 TraesCS2A01G423000 chr4B 87.379 309 37 2 2220 2528 564110494 564110800 1.500000e-93 353.0
35 TraesCS2A01G423000 chr1D 97.379 496 10 1 2914 3409 283562425 283561933 0.000000e+00 841.0
36 TraesCS2A01G423000 chr6A 91.068 459 27 5 130 574 594236938 594237396 2.910000e-170 608.0
37 TraesCS2A01G423000 chr6A 94.697 132 7 0 1 132 594236370 594236501 4.460000e-49 206.0
38 TraesCS2A01G423000 chr5D 87.449 494 44 9 130 608 378672225 378671735 1.380000e-153 553.0
39 TraesCS2A01G423000 chr4A 96.212 132 5 0 1 132 26988469 26988600 2.060000e-52 217.0
40 TraesCS2A01G423000 chr3D 94.697 132 7 0 1 132 500662397 500662266 4.460000e-49 206.0
41 TraesCS2A01G423000 chr7B 85.294 68 6 4 559 624 682385148 682385213 2.200000e-07 67.6
42 TraesCS2A01G423000 chr7D 85.075 67 6 4 560 624 54603007 54603071 7.900000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G423000 chr2A 678116007 678119415 3408 False 6296.0 6296 100.0000 1 3409 1 chr2A.!!$F4 3408
1 TraesCS2A01G423000 chr2B 636089204 636091485 2281 False 3149.0 3149 91.5660 613 2917 1 chr2B.!!$F4 2304
2 TraesCS2A01G423000 chr2B 476379484 476380100 616 False 669.0 669 86.8250 6 611 1 chr2B.!!$F1 605
3 TraesCS2A01G423000 chr2D 534734291 534737195 2904 False 1588.5 2994 91.8075 613 2913 2 chr2D.!!$F4 2300
4 TraesCS2A01G423000 chr2D 534525752 534527041 1289 True 726.0 726 77.4320 1043 2320 1 chr2D.!!$R2 1277
5 TraesCS2A01G423000 chr2D 534483903 534485205 1302 False 627.0 627 76.1830 1043 2320 1 chr2D.!!$F2 1277
6 TraesCS2A01G423000 chr5A 70486578 70487200 622 True 918.0 918 93.5900 1 611 1 chr5A.!!$R1 610
7 TraesCS2A01G423000 chr7A 634897589 634898205 616 False 887.0 887 93.0420 1 602 1 chr7A.!!$F2 601
8 TraesCS2A01G423000 chr4B 575855577 575856189 612 True 652.0 652 86.6030 7 604 1 chr4B.!!$R2 597
9 TraesCS2A01G423000 chr4B 575830613 575831232 619 True 632.0 632 85.8040 1 604 1 chr4B.!!$R1 603
10 TraesCS2A01G423000 chr6A 594236370 594237396 1026 False 407.0 608 92.8825 1 574 2 chr6A.!!$F1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
883 1371 0.34479 ACCCATCTCCTCCTCCACAT 59.655 55.0 0.0 0.0 0.0 3.21 F
1608 2158 0.17910 ATCTGGATCAGCAACGACGG 60.179 55.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2148 2708 0.040425 CGACCAACGCCTTTTCCTTG 60.040 55.0 0.00 0.0 34.51 3.61 R
3120 4359 0.036732 AGCTTGCGACAAGATGGGAA 59.963 50.0 19.38 0.0 0.00 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 572 8.339714 GTGTGTGCAACTAGACTACATTAAAAA 58.660 33.333 0.00 0.00 38.04 1.94
295 739 7.447238 AGTTGCACCATGTAGTATTAAAGTTGT 59.553 33.333 0.00 0.00 0.00 3.32
522 977 7.829211 ACCAGTCTGTACACATTTAATGCTAAT 59.171 33.333 4.68 0.00 0.00 1.73
604 1072 2.427410 GCGCGTGCACTTTGAAGG 60.427 61.111 17.66 0.00 42.15 3.46
611 1079 3.242936 GCGTGCACTTTGAAGGTTTTAGA 60.243 43.478 16.19 0.00 0.00 2.10
641 1116 6.942532 TTATCTGTGTGGAAAAGATATGGC 57.057 37.500 0.00 0.00 33.93 4.40
642 1117 4.574674 TCTGTGTGGAAAAGATATGGCT 57.425 40.909 0.00 0.00 0.00 4.75
643 1118 5.692115 TCTGTGTGGAAAAGATATGGCTA 57.308 39.130 0.00 0.00 0.00 3.93
644 1119 6.252599 TCTGTGTGGAAAAGATATGGCTAT 57.747 37.500 0.00 0.00 0.00 2.97
645 1120 7.373617 TCTGTGTGGAAAAGATATGGCTATA 57.626 36.000 0.00 0.00 0.00 1.31
646 1121 7.217200 TCTGTGTGGAAAAGATATGGCTATAC 58.783 38.462 0.00 0.00 0.00 1.47
819 1295 2.081161 CCCCATCCCCTAGCAGCTT 61.081 63.158 0.00 0.00 0.00 3.74
875 1363 4.554036 GCCGCCACCCATCTCCTC 62.554 72.222 0.00 0.00 0.00 3.71
876 1364 3.866582 CCGCCACCCATCTCCTCC 61.867 72.222 0.00 0.00 0.00 4.30
877 1365 2.765807 CGCCACCCATCTCCTCCT 60.766 66.667 0.00 0.00 0.00 3.69
878 1366 2.801631 CGCCACCCATCTCCTCCTC 61.802 68.421 0.00 0.00 0.00 3.71
879 1367 2.447714 GCCACCCATCTCCTCCTCC 61.448 68.421 0.00 0.00 0.00 4.30
880 1368 1.003442 CCACCCATCTCCTCCTCCA 59.997 63.158 0.00 0.00 0.00 3.86
881 1369 1.341156 CCACCCATCTCCTCCTCCAC 61.341 65.000 0.00 0.00 0.00 4.02
882 1370 0.618680 CACCCATCTCCTCCTCCACA 60.619 60.000 0.00 0.00 0.00 4.17
883 1371 0.344790 ACCCATCTCCTCCTCCACAT 59.655 55.000 0.00 0.00 0.00 3.21
884 1372 1.055040 CCCATCTCCTCCTCCACATC 58.945 60.000 0.00 0.00 0.00 3.06
932 1420 2.214216 CGTTGACCACCTCCCTCCA 61.214 63.158 0.00 0.00 0.00 3.86
1224 1720 2.098607 CGGCATCTTCTACCAGAACGTA 59.901 50.000 0.00 0.00 29.89 3.57
1226 1722 3.117046 GCATCTTCTACCAGAACGTAGC 58.883 50.000 0.00 0.00 36.46 3.58
1227 1723 3.364062 CATCTTCTACCAGAACGTAGCG 58.636 50.000 0.00 0.00 36.46 4.26
1246 1751 3.032609 CTAGCGCGATTCAGCCCG 61.033 66.667 12.10 0.00 0.00 6.13
1527 2044 6.183360 CCTTCTTGGTAAACCATGGATTCATC 60.183 42.308 21.47 7.29 46.97 2.92
1535 2052 1.683943 CATGGATTCATCAACGGGCT 58.316 50.000 0.00 0.00 0.00 5.19
1591 2135 0.664761 CCACCGTGCCATTGATGATC 59.335 55.000 0.00 0.00 0.00 2.92
1608 2158 0.179100 ATCTGGATCAGCAACGACGG 60.179 55.000 0.00 0.00 0.00 4.79
1609 2159 1.079819 CTGGATCAGCAACGACGGT 60.080 57.895 0.00 0.00 0.00 4.83
1706 2259 1.971167 GTTGGAGCACGCCCATCAA 60.971 57.895 0.89 0.00 33.04 2.57
1830 2389 1.732259 CTCAATGTAAGTGTCGCCACC 59.268 52.381 0.00 0.00 42.88 4.61
1869 2428 1.511613 AGATCCCCATCAACGTCCAT 58.488 50.000 0.00 0.00 0.00 3.41
1926 2486 2.070028 GTCACCGGAGAAAGAAAGCTC 58.930 52.381 9.46 0.00 0.00 4.09
2148 2708 4.511527 TCTTCACCATTGATCTCAAGAGC 58.488 43.478 0.00 0.00 39.47 4.09
2270 2830 4.421515 CCACTGCAGCTGGGGGAG 62.422 72.222 17.12 2.28 0.00 4.30
2352 2912 2.761809 AGATGAGGGCAGATTGAGTCT 58.238 47.619 0.00 0.00 37.80 3.24
2373 2933 8.634475 AGTCTGCAATTTCTTAAAAACTTGTC 57.366 30.769 0.00 0.00 0.00 3.18
2531 3091 5.724328 TGACTGTTCTATTTGGCTCAGTAG 58.276 41.667 0.00 0.00 36.49 2.57
2536 3098 6.166279 TGTTCTATTTGGCTCAGTAGAACTG 58.834 40.000 23.54 0.50 46.60 3.16
2552 3114 5.429957 AGAACTGAAACTTTCTGTGATGC 57.570 39.130 13.13 5.73 40.96 3.91
2566 3128 2.290367 TGTGATGCTGTTTTTCGTCTGG 59.710 45.455 0.00 0.00 0.00 3.86
2574 3136 4.787598 CTGTTTTTCGTCTGGAATTCTGG 58.212 43.478 5.23 0.00 33.85 3.86
2593 3155 6.335471 TCTGGTGTAGAAGATTGTTTACGA 57.665 37.500 0.00 0.00 30.84 3.43
2594 3156 6.751157 TCTGGTGTAGAAGATTGTTTACGAA 58.249 36.000 0.00 0.00 30.84 3.85
2596 3158 7.330946 TCTGGTGTAGAAGATTGTTTACGAATG 59.669 37.037 0.00 0.00 30.84 2.67
2598 3160 7.117236 TGGTGTAGAAGATTGTTTACGAATGAC 59.883 37.037 0.00 0.00 0.00 3.06
2600 3162 9.350357 GTGTAGAAGATTGTTTACGAATGACTA 57.650 33.333 0.00 0.00 0.00 2.59
2614 3176 1.522668 TGACTACAACTGCCATGTGC 58.477 50.000 0.00 0.00 41.77 4.57
2620 3182 1.338973 ACAACTGCCATGTGCTTTCAG 59.661 47.619 7.54 0.00 42.00 3.02
2629 3191 4.156556 GCCATGTGCTTTCAGTTCTGAATA 59.843 41.667 14.67 6.65 36.87 1.75
2638 3200 8.370940 TGCTTTCAGTTCTGAATATATCTAGGG 58.629 37.037 14.67 0.44 0.00 3.53
2660 3223 6.554982 AGGGTAGAAATGCATATCAGTGTCTA 59.445 38.462 0.00 0.00 0.00 2.59
2663 3226 7.928706 GGTAGAAATGCATATCAGTGTCTAACT 59.071 37.037 0.00 0.00 40.93 2.24
2679 3242 9.190317 AGTGTCTAACTGTATGTAATCTCATCA 57.810 33.333 0.00 0.00 37.88 3.07
2724 3288 8.557592 TTGTATATCTCATGATGGATTTGAGC 57.442 34.615 0.00 0.00 37.41 4.26
2730 3294 5.298527 TCTCATGATGGATTTGAGCAATGTC 59.701 40.000 0.00 0.00 37.41 3.06
2753 3317 6.304683 GTCGTTAAATTTGACATGCCAACTAC 59.695 38.462 12.93 0.79 32.91 2.73
2754 3318 6.017026 TCGTTAAATTTGACATGCCAACTACA 60.017 34.615 12.93 0.00 0.00 2.74
2820 4058 0.038599 ATGACCTGAGTTGGCATGCA 59.961 50.000 21.36 2.54 0.00 3.96
2822 4060 0.242017 GACCTGAGTTGGCATGCAAC 59.758 55.000 21.36 20.00 0.00 4.17
2823 4061 0.467844 ACCTGAGTTGGCATGCAACA 60.468 50.000 24.86 12.65 35.18 3.33
2828 4066 2.288948 TGAGTTGGCATGCAACAAATCC 60.289 45.455 24.47 13.22 39.98 3.01
2839 4078 3.132925 GCAACAAATCCAACACAAGCAT 58.867 40.909 0.00 0.00 0.00 3.79
2859 4098 1.607467 GCACTGGCCCAATCTGGTT 60.607 57.895 0.00 0.00 35.17 3.67
2891 4130 3.708403 ACTTGGATGAGTGATGCTTGA 57.292 42.857 0.00 0.00 0.00 3.02
2899 4138 5.048504 GGATGAGTGATGCTTGAAAGTTGAA 60.049 40.000 0.00 0.00 0.00 2.69
2917 4156 6.300354 GTTGAAGCTACAACATGTAAGTGT 57.700 37.500 12.65 9.88 46.19 3.55
2918 4157 6.725246 GTTGAAGCTACAACATGTAAGTGTT 58.275 36.000 6.95 2.21 46.19 3.32
2934 4173 4.608948 AGTGTTGAACTTGGAGGAGTAG 57.391 45.455 0.00 0.00 34.57 2.57
2935 4174 3.067833 GTGTTGAACTTGGAGGAGTAGC 58.932 50.000 0.00 0.00 0.00 3.58
2936 4175 2.288825 TGTTGAACTTGGAGGAGTAGCG 60.289 50.000 0.00 0.00 0.00 4.26
2937 4176 1.629043 TGAACTTGGAGGAGTAGCGT 58.371 50.000 0.00 0.00 0.00 5.07
2938 4177 2.799017 TGAACTTGGAGGAGTAGCGTA 58.201 47.619 0.00 0.00 0.00 4.42
2939 4178 2.490903 TGAACTTGGAGGAGTAGCGTAC 59.509 50.000 0.00 0.00 0.00 3.67
2940 4179 1.472188 ACTTGGAGGAGTAGCGTACC 58.528 55.000 0.00 0.00 0.00 3.34
2941 4180 1.272313 ACTTGGAGGAGTAGCGTACCA 60.272 52.381 0.00 0.00 0.00 3.25
2942 4181 1.405821 CTTGGAGGAGTAGCGTACCAG 59.594 57.143 0.00 0.00 0.00 4.00
2943 4182 0.395311 TGGAGGAGTAGCGTACCAGG 60.395 60.000 0.00 0.00 0.00 4.45
2944 4183 0.106819 GGAGGAGTAGCGTACCAGGA 60.107 60.000 0.00 0.00 0.00 3.86
2945 4184 1.310904 GAGGAGTAGCGTACCAGGAG 58.689 60.000 0.00 0.00 0.00 3.69
2946 4185 0.752376 AGGAGTAGCGTACCAGGAGC 60.752 60.000 0.00 0.00 0.00 4.70
2947 4186 1.035932 GGAGTAGCGTACCAGGAGCA 61.036 60.000 0.00 0.00 0.00 4.26
2948 4187 0.382515 GAGTAGCGTACCAGGAGCAG 59.617 60.000 0.00 0.00 0.00 4.24
2949 4188 1.227002 GTAGCGTACCAGGAGCAGC 60.227 63.158 0.00 0.00 0.00 5.25
2950 4189 1.379977 TAGCGTACCAGGAGCAGCT 60.380 57.895 0.00 0.00 38.57 4.24
2951 4190 1.667154 TAGCGTACCAGGAGCAGCTG 61.667 60.000 10.11 10.11 36.30 4.24
2952 4191 2.510238 CGTACCAGGAGCAGCTGC 60.510 66.667 31.53 31.53 42.49 5.25
2962 4201 3.741860 GCAGCTGCTGTTGTGTCT 58.258 55.556 31.33 0.00 38.21 3.41
2963 4202 2.028130 GCAGCTGCTGTTGTGTCTT 58.972 52.632 31.33 0.00 38.21 3.01
2964 4203 0.383231 GCAGCTGCTGTTGTGTCTTT 59.617 50.000 31.33 0.00 38.21 2.52
2965 4204 1.598924 GCAGCTGCTGTTGTGTCTTTC 60.599 52.381 31.33 6.20 38.21 2.62
2966 4205 1.945394 CAGCTGCTGTTGTGTCTTTCT 59.055 47.619 21.21 0.00 0.00 2.52
2967 4206 2.357009 CAGCTGCTGTTGTGTCTTTCTT 59.643 45.455 21.21 0.00 0.00 2.52
2968 4207 2.357009 AGCTGCTGTTGTGTCTTTCTTG 59.643 45.455 0.00 0.00 0.00 3.02
2969 4208 2.542411 GCTGCTGTTGTGTCTTTCTTGG 60.542 50.000 0.00 0.00 0.00 3.61
2970 4209 2.684881 CTGCTGTTGTGTCTTTCTTGGT 59.315 45.455 0.00 0.00 0.00 3.67
2971 4210 2.423185 TGCTGTTGTGTCTTTCTTGGTG 59.577 45.455 0.00 0.00 0.00 4.17
2972 4211 2.423538 GCTGTTGTGTCTTTCTTGGTGT 59.576 45.455 0.00 0.00 0.00 4.16
2973 4212 3.731867 GCTGTTGTGTCTTTCTTGGTGTG 60.732 47.826 0.00 0.00 0.00 3.82
2974 4213 3.417101 TGTTGTGTCTTTCTTGGTGTGT 58.583 40.909 0.00 0.00 0.00 3.72
2975 4214 3.190327 TGTTGTGTCTTTCTTGGTGTGTG 59.810 43.478 0.00 0.00 0.00 3.82
2976 4215 2.364632 TGTGTCTTTCTTGGTGTGTGG 58.635 47.619 0.00 0.00 0.00 4.17
2977 4216 1.065551 GTGTCTTTCTTGGTGTGTGGC 59.934 52.381 0.00 0.00 0.00 5.01
2978 4217 0.307760 GTCTTTCTTGGTGTGTGGCG 59.692 55.000 0.00 0.00 0.00 5.69
2979 4218 0.817634 TCTTTCTTGGTGTGTGGCGG 60.818 55.000 0.00 0.00 0.00 6.13
2980 4219 2.406452 CTTTCTTGGTGTGTGGCGGC 62.406 60.000 0.00 0.00 0.00 6.53
2981 4220 2.902423 TTTCTTGGTGTGTGGCGGCT 62.902 55.000 11.43 0.00 0.00 5.52
2982 4221 3.357079 CTTGGTGTGTGGCGGCTC 61.357 66.667 11.43 7.43 0.00 4.70
2983 4222 3.832237 CTTGGTGTGTGGCGGCTCT 62.832 63.158 11.43 0.00 0.00 4.09
2984 4223 3.825160 TTGGTGTGTGGCGGCTCTC 62.825 63.158 11.43 8.42 0.00 3.20
2985 4224 4.314440 GGTGTGTGGCGGCTCTCA 62.314 66.667 11.43 11.25 0.00 3.27
2986 4225 3.044305 GTGTGTGGCGGCTCTCAC 61.044 66.667 23.86 23.86 34.71 3.51
2987 4226 4.662961 TGTGTGGCGGCTCTCACG 62.663 66.667 11.43 0.00 36.74 4.35
2990 4229 4.373116 GTGGCGGCTCTCACGGAA 62.373 66.667 11.43 0.00 0.00 4.30
2991 4230 4.373116 TGGCGGCTCTCACGGAAC 62.373 66.667 11.43 0.00 0.00 3.62
2992 4231 4.373116 GGCGGCTCTCACGGAACA 62.373 66.667 0.00 0.00 0.00 3.18
2993 4232 2.811317 GCGGCTCTCACGGAACAG 60.811 66.667 0.00 0.00 0.00 3.16
2994 4233 2.962569 CGGCTCTCACGGAACAGA 59.037 61.111 0.00 0.00 0.00 3.41
2995 4234 1.153939 CGGCTCTCACGGAACAGAG 60.154 63.158 0.00 0.00 39.44 3.35
2996 4235 1.216710 GGCTCTCACGGAACAGAGG 59.783 63.158 0.00 0.00 37.26 3.69
2997 4236 1.251527 GGCTCTCACGGAACAGAGGA 61.252 60.000 0.00 0.00 37.26 3.71
2998 4237 0.172352 GCTCTCACGGAACAGAGGAG 59.828 60.000 0.00 0.00 37.26 3.69
2999 4238 0.814457 CTCTCACGGAACAGAGGAGG 59.186 60.000 0.00 0.00 33.69 4.30
3000 4239 0.404426 TCTCACGGAACAGAGGAGGA 59.596 55.000 0.00 0.00 32.07 3.71
3001 4240 0.814457 CTCACGGAACAGAGGAGGAG 59.186 60.000 0.00 0.00 0.00 3.69
3002 4241 0.612174 TCACGGAACAGAGGAGGAGG 60.612 60.000 0.00 0.00 0.00 4.30
3003 4242 0.612174 CACGGAACAGAGGAGGAGGA 60.612 60.000 0.00 0.00 0.00 3.71
3004 4243 0.323908 ACGGAACAGAGGAGGAGGAG 60.324 60.000 0.00 0.00 0.00 3.69
3005 4244 1.671901 CGGAACAGAGGAGGAGGAGC 61.672 65.000 0.00 0.00 0.00 4.70
3006 4245 0.325203 GGAACAGAGGAGGAGGAGCT 60.325 60.000 0.00 0.00 0.00 4.09
3007 4246 1.111277 GAACAGAGGAGGAGGAGCTC 58.889 60.000 4.71 4.71 0.00 4.09
3019 4258 2.748209 AGGAGCTCCTCTTCTAGGTC 57.252 55.000 30.40 0.00 44.77 3.85
3020 4259 1.926665 AGGAGCTCCTCTTCTAGGTCA 59.073 52.381 30.40 0.00 44.77 4.02
3021 4260 2.313342 AGGAGCTCCTCTTCTAGGTCAA 59.687 50.000 30.40 0.00 44.77 3.18
3022 4261 2.429250 GGAGCTCCTCTTCTAGGTCAAC 59.571 54.545 26.25 0.00 46.62 3.18
3023 4262 3.093057 GAGCTCCTCTTCTAGGTCAACA 58.907 50.000 0.87 0.00 46.62 3.33
3024 4263 3.704061 GAGCTCCTCTTCTAGGTCAACAT 59.296 47.826 0.87 0.00 46.62 2.71
3025 4264 4.100373 AGCTCCTCTTCTAGGTCAACATT 58.900 43.478 0.00 0.00 46.62 2.71
3026 4265 4.534103 AGCTCCTCTTCTAGGTCAACATTT 59.466 41.667 0.00 0.00 46.62 2.32
3027 4266 4.873259 GCTCCTCTTCTAGGTCAACATTTC 59.127 45.833 0.00 0.00 46.62 2.17
3028 4267 5.337975 GCTCCTCTTCTAGGTCAACATTTCT 60.338 44.000 0.00 0.00 46.62 2.52
3029 4268 6.287589 TCCTCTTCTAGGTCAACATTTCTC 57.712 41.667 0.00 0.00 46.62 2.87
3030 4269 5.780282 TCCTCTTCTAGGTCAACATTTCTCA 59.220 40.000 0.00 0.00 46.62 3.27
3031 4270 6.441924 TCCTCTTCTAGGTCAACATTTCTCAT 59.558 38.462 0.00 0.00 46.62 2.90
3032 4271 6.538021 CCTCTTCTAGGTCAACATTTCTCATG 59.462 42.308 0.00 0.00 40.94 3.07
3033 4272 6.409704 TCTTCTAGGTCAACATTTCTCATGG 58.590 40.000 0.00 0.00 0.00 3.66
3034 4273 5.102953 TCTAGGTCAACATTTCTCATGGG 57.897 43.478 0.00 0.00 0.00 4.00
3035 4274 2.450476 AGGTCAACATTTCTCATGGGC 58.550 47.619 0.00 0.00 0.00 5.36
3036 4275 2.042162 AGGTCAACATTTCTCATGGGCT 59.958 45.455 0.00 0.00 0.00 5.19
3037 4276 2.827921 GGTCAACATTTCTCATGGGCTT 59.172 45.455 0.00 0.00 0.00 4.35
3038 4277 3.367703 GGTCAACATTTCTCATGGGCTTG 60.368 47.826 0.00 0.00 0.00 4.01
3039 4278 2.827322 TCAACATTTCTCATGGGCTTGG 59.173 45.455 0.00 0.00 0.00 3.61
3040 4279 1.856629 ACATTTCTCATGGGCTTGGG 58.143 50.000 0.00 0.00 0.00 4.12
3041 4280 0.462789 CATTTCTCATGGGCTTGGGC 59.537 55.000 0.00 0.00 37.82 5.36
3064 4303 4.464597 CCTAAGAGATAGGTACAGATGGGC 59.535 50.000 0.00 0.00 45.43 5.36
3065 4304 3.913370 AGAGATAGGTACAGATGGGCT 57.087 47.619 0.00 0.00 0.00 5.19
3066 4305 5.340891 AAGAGATAGGTACAGATGGGCTA 57.659 43.478 0.00 0.00 0.00 3.93
3067 4306 4.929479 AGAGATAGGTACAGATGGGCTAG 58.071 47.826 0.00 0.00 0.00 3.42
3068 4307 4.020543 GAGATAGGTACAGATGGGCTAGG 58.979 52.174 0.00 0.00 0.00 3.02
3069 4308 2.696526 TAGGTACAGATGGGCTAGGG 57.303 55.000 0.00 0.00 0.00 3.53
3070 4309 0.764752 AGGTACAGATGGGCTAGGGC 60.765 60.000 0.00 0.00 37.82 5.19
3080 4319 2.847715 GCTAGGGCCCATACCGGT 60.848 66.667 27.56 13.98 0.00 5.28
3081 4320 2.449450 GCTAGGGCCCATACCGGTT 61.449 63.158 27.56 2.06 0.00 4.44
3082 4321 1.752833 CTAGGGCCCATACCGGTTC 59.247 63.158 27.56 0.00 0.00 3.62
3083 4322 1.003182 TAGGGCCCATACCGGTTCA 59.997 57.895 27.56 0.00 0.00 3.18
3084 4323 0.620990 TAGGGCCCATACCGGTTCAA 60.621 55.000 27.56 0.00 0.00 2.69
3085 4324 1.751544 GGGCCCATACCGGTTCAAC 60.752 63.158 19.95 0.00 0.00 3.18
3086 4325 1.001887 GGCCCATACCGGTTCAACA 60.002 57.895 15.04 0.00 0.00 3.33
3087 4326 1.310216 GGCCCATACCGGTTCAACAC 61.310 60.000 15.04 0.00 0.00 3.32
3088 4327 0.322187 GCCCATACCGGTTCAACACT 60.322 55.000 15.04 0.00 0.00 3.55
3089 4328 1.734163 CCCATACCGGTTCAACACTC 58.266 55.000 15.04 0.00 0.00 3.51
3090 4329 1.677820 CCCATACCGGTTCAACACTCC 60.678 57.143 15.04 0.00 0.00 3.85
3091 4330 1.677820 CCATACCGGTTCAACACTCCC 60.678 57.143 15.04 0.00 0.00 4.30
3092 4331 0.616891 ATACCGGTTCAACACTCCCC 59.383 55.000 15.04 0.00 0.00 4.81
3093 4332 1.482748 TACCGGTTCAACACTCCCCC 61.483 60.000 15.04 0.00 0.00 5.40
3094 4333 2.526046 CCGGTTCAACACTCCCCCT 61.526 63.158 0.00 0.00 0.00 4.79
3095 4334 1.003718 CGGTTCAACACTCCCCCTC 60.004 63.158 0.00 0.00 0.00 4.30
3096 4335 1.764571 CGGTTCAACACTCCCCCTCA 61.765 60.000 0.00 0.00 0.00 3.86
3097 4336 0.476771 GGTTCAACACTCCCCCTCAA 59.523 55.000 0.00 0.00 0.00 3.02
3098 4337 1.545651 GGTTCAACACTCCCCCTCAAG 60.546 57.143 0.00 0.00 0.00 3.02
3099 4338 1.420138 GTTCAACACTCCCCCTCAAGA 59.580 52.381 0.00 0.00 0.00 3.02
3100 4339 2.040412 GTTCAACACTCCCCCTCAAGAT 59.960 50.000 0.00 0.00 0.00 2.40
3101 4340 1.630369 TCAACACTCCCCCTCAAGATG 59.370 52.381 0.00 0.00 0.00 2.90
3102 4341 0.995024 AACACTCCCCCTCAAGATGG 59.005 55.000 0.00 0.00 0.00 3.51
3103 4342 0.916358 ACACTCCCCCTCAAGATGGG 60.916 60.000 3.64 3.64 44.19 4.00
3104 4343 0.916358 CACTCCCCCTCAAGATGGGT 60.916 60.000 9.22 0.00 43.09 4.51
3105 4344 0.916358 ACTCCCCCTCAAGATGGGTG 60.916 60.000 9.22 7.29 43.09 4.61
3106 4345 1.619363 TCCCCCTCAAGATGGGTGG 60.619 63.158 9.22 7.39 43.09 4.61
3107 4346 1.930656 CCCCCTCAAGATGGGTGGT 60.931 63.158 9.22 0.00 43.09 4.16
3108 4347 0.623324 CCCCCTCAAGATGGGTGGTA 60.623 60.000 9.22 0.00 43.09 3.25
3109 4348 0.839946 CCCCTCAAGATGGGTGGTAG 59.160 60.000 2.54 0.00 43.09 3.18
3110 4349 1.625228 CCCCTCAAGATGGGTGGTAGA 60.625 57.143 2.54 0.00 43.09 2.59
3111 4350 2.412591 CCCTCAAGATGGGTGGTAGAT 58.587 52.381 0.00 0.00 39.82 1.98
3112 4351 3.587498 CCCTCAAGATGGGTGGTAGATA 58.413 50.000 0.00 0.00 39.82 1.98
3113 4352 4.171234 CCCTCAAGATGGGTGGTAGATAT 58.829 47.826 0.00 0.00 39.82 1.63
3114 4353 4.223923 CCCTCAAGATGGGTGGTAGATATC 59.776 50.000 0.00 0.00 39.82 1.63
3115 4354 5.090139 CCTCAAGATGGGTGGTAGATATCT 58.910 45.833 10.73 10.73 0.00 1.98
3116 4355 6.256819 CCTCAAGATGGGTGGTAGATATCTA 58.743 44.000 8.44 8.44 0.00 1.98
3117 4356 6.900186 CCTCAAGATGGGTGGTAGATATCTAT 59.100 42.308 15.43 0.00 0.00 1.98
3118 4357 7.069331 CCTCAAGATGGGTGGTAGATATCTATC 59.931 44.444 15.43 15.24 0.00 2.08
3119 4358 7.478721 TCAAGATGGGTGGTAGATATCTATCA 58.521 38.462 19.77 19.77 37.24 2.15
3120 4359 8.125081 TCAAGATGGGTGGTAGATATCTATCAT 58.875 37.037 24.96 17.16 41.17 2.45
3121 4360 8.766476 CAAGATGGGTGGTAGATATCTATCATT 58.234 37.037 24.96 13.40 41.17 2.57
3122 4361 8.546083 AGATGGGTGGTAGATATCTATCATTC 57.454 38.462 24.96 19.71 41.17 2.67
3123 4362 7.566879 AGATGGGTGGTAGATATCTATCATTCC 59.433 40.741 24.96 25.51 41.17 3.01
3124 4363 5.964477 TGGGTGGTAGATATCTATCATTCCC 59.036 44.000 29.17 29.17 42.17 3.97
3125 4364 5.964477 GGGTGGTAGATATCTATCATTCCCA 59.036 44.000 30.08 21.87 41.77 4.37
3126 4365 6.617371 GGGTGGTAGATATCTATCATTCCCAT 59.383 42.308 30.08 3.27 41.77 4.00
3127 4366 7.202047 GGGTGGTAGATATCTATCATTCCCATC 60.202 44.444 30.08 23.11 41.77 3.51
3128 4367 7.566879 GGTGGTAGATATCTATCATTCCCATCT 59.433 40.741 24.96 0.00 41.17 2.90
3129 4368 8.986991 GTGGTAGATATCTATCATTCCCATCTT 58.013 37.037 24.96 0.00 41.17 2.40
3130 4369 8.985922 TGGTAGATATCTATCATTCCCATCTTG 58.014 37.037 19.77 0.00 34.84 3.02
3131 4370 8.986991 GGTAGATATCTATCATTCCCATCTTGT 58.013 37.037 16.72 0.00 35.17 3.16
3133 4372 7.780064 AGATATCTATCATTCCCATCTTGTCG 58.220 38.462 2.53 0.00 35.17 4.35
3134 4373 3.995199 TCTATCATTCCCATCTTGTCGC 58.005 45.455 0.00 0.00 0.00 5.19
3135 4374 2.715749 ATCATTCCCATCTTGTCGCA 57.284 45.000 0.00 0.00 0.00 5.10
3136 4375 2.488204 TCATTCCCATCTTGTCGCAA 57.512 45.000 0.00 0.00 0.00 4.85
3137 4376 2.358957 TCATTCCCATCTTGTCGCAAG 58.641 47.619 11.78 11.78 0.00 4.01
3138 4377 1.098050 ATTCCCATCTTGTCGCAAGC 58.902 50.000 12.81 0.00 37.18 4.01
3139 4378 0.036732 TTCCCATCTTGTCGCAAGCT 59.963 50.000 12.81 3.19 37.18 3.74
3140 4379 0.901827 TCCCATCTTGTCGCAAGCTA 59.098 50.000 12.81 0.66 37.18 3.32
3141 4380 1.134699 TCCCATCTTGTCGCAAGCTAG 60.135 52.381 12.81 6.70 37.18 3.42
3142 4381 1.293924 CCATCTTGTCGCAAGCTAGG 58.706 55.000 12.81 10.57 37.18 3.02
3143 4382 1.406069 CCATCTTGTCGCAAGCTAGGT 60.406 52.381 12.81 0.00 37.18 3.08
3144 4383 2.350522 CATCTTGTCGCAAGCTAGGTT 58.649 47.619 0.12 0.12 37.18 3.50
3145 4384 1.795768 TCTTGTCGCAAGCTAGGTTG 58.204 50.000 26.61 26.61 37.18 3.77
3155 4394 3.841643 CAAGCTAGGTTGCATTCCTTTG 58.158 45.455 20.79 10.27 36.60 2.77
3156 4395 1.821136 AGCTAGGTTGCATTCCTTTGC 59.179 47.619 14.68 17.00 43.07 3.68
3157 4396 1.821136 GCTAGGTTGCATTCCTTTGCT 59.179 47.619 14.68 0.00 43.18 3.91
3158 4397 2.416431 GCTAGGTTGCATTCCTTTGCTG 60.416 50.000 14.68 4.45 43.18 4.41
3159 4398 0.319405 AGGTTGCATTCCTTTGCTGC 59.681 50.000 5.29 0.00 43.18 5.25
3160 4399 0.671472 GGTTGCATTCCTTTGCTGCC 60.671 55.000 0.00 0.00 43.18 4.85
3161 4400 0.033781 GTTGCATTCCTTTGCTGCCA 59.966 50.000 0.00 0.00 43.18 4.92
3162 4401 0.757512 TTGCATTCCTTTGCTGCCAA 59.242 45.000 0.00 0.00 43.18 4.52
3163 4402 0.757512 TGCATTCCTTTGCTGCCAAA 59.242 45.000 0.00 0.00 43.18 3.28
3164 4403 1.150827 GCATTCCTTTGCTGCCAAAC 58.849 50.000 0.00 0.00 39.57 2.93
3165 4404 1.799544 CATTCCTTTGCTGCCAAACC 58.200 50.000 0.00 0.00 36.09 3.27
3166 4405 1.345415 CATTCCTTTGCTGCCAAACCT 59.655 47.619 0.00 0.00 36.09 3.50
3167 4406 1.494960 TTCCTTTGCTGCCAAACCTT 58.505 45.000 0.00 0.00 36.09 3.50
3168 4407 1.494960 TCCTTTGCTGCCAAACCTTT 58.505 45.000 0.00 0.00 36.09 3.11
3169 4408 1.836802 TCCTTTGCTGCCAAACCTTTT 59.163 42.857 0.00 0.00 36.09 2.27
3170 4409 1.941975 CCTTTGCTGCCAAACCTTTTG 59.058 47.619 0.00 0.00 36.09 2.44
3171 4410 2.631267 CTTTGCTGCCAAACCTTTTGT 58.369 42.857 0.00 0.00 36.09 2.83
3172 4411 2.307934 TTGCTGCCAAACCTTTTGTC 57.692 45.000 0.00 0.00 0.00 3.18
3173 4412 1.189752 TGCTGCCAAACCTTTTGTCA 58.810 45.000 0.00 0.00 0.00 3.58
3174 4413 1.552337 TGCTGCCAAACCTTTTGTCAA 59.448 42.857 0.00 0.00 0.00 3.18
3175 4414 2.204237 GCTGCCAAACCTTTTGTCAAG 58.796 47.619 0.00 0.00 0.00 3.02
3176 4415 2.204237 CTGCCAAACCTTTTGTCAAGC 58.796 47.619 0.00 0.00 0.00 4.01
3177 4416 1.552337 TGCCAAACCTTTTGTCAAGCA 59.448 42.857 0.00 0.00 0.00 3.91
3178 4417 2.204237 GCCAAACCTTTTGTCAAGCAG 58.796 47.619 0.00 0.00 0.00 4.24
3179 4418 2.418609 GCCAAACCTTTTGTCAAGCAGT 60.419 45.455 0.00 0.00 0.00 4.40
3180 4419 3.447742 CCAAACCTTTTGTCAAGCAGTC 58.552 45.455 0.00 0.00 0.00 3.51
3181 4420 3.131046 CCAAACCTTTTGTCAAGCAGTCT 59.869 43.478 0.00 0.00 0.00 3.24
3182 4421 4.107622 CAAACCTTTTGTCAAGCAGTCTG 58.892 43.478 0.00 0.00 0.00 3.51
3183 4422 1.678101 ACCTTTTGTCAAGCAGTCTGC 59.322 47.619 17.48 17.48 45.46 4.26
3194 4433 1.012841 GCAGTCTGCTATCTGTTGGC 58.987 55.000 17.89 0.00 40.96 4.52
3195 4434 1.661341 CAGTCTGCTATCTGTTGGCC 58.339 55.000 0.00 0.00 0.00 5.36
3196 4435 1.209019 CAGTCTGCTATCTGTTGGCCT 59.791 52.381 3.32 0.00 0.00 5.19
3197 4436 1.209019 AGTCTGCTATCTGTTGGCCTG 59.791 52.381 3.32 0.00 0.00 4.85
3198 4437 1.065854 GTCTGCTATCTGTTGGCCTGT 60.066 52.381 3.32 0.00 0.00 4.00
3199 4438 1.065926 TCTGCTATCTGTTGGCCTGTG 60.066 52.381 3.32 0.00 0.00 3.66
3200 4439 0.692476 TGCTATCTGTTGGCCTGTGT 59.308 50.000 3.32 0.00 0.00 3.72
3201 4440 1.089920 GCTATCTGTTGGCCTGTGTG 58.910 55.000 3.32 0.00 0.00 3.82
3202 4441 1.089920 CTATCTGTTGGCCTGTGTGC 58.910 55.000 3.32 0.00 0.00 4.57
3203 4442 0.399833 TATCTGTTGGCCTGTGTGCA 59.600 50.000 3.32 0.00 0.00 4.57
3204 4443 1.174712 ATCTGTTGGCCTGTGTGCAC 61.175 55.000 10.75 10.75 0.00 4.57
3205 4444 2.044551 TGTTGGCCTGTGTGCACA 60.045 55.556 17.42 17.42 39.32 4.57
3206 4445 1.455402 TGTTGGCCTGTGTGCACAT 60.455 52.632 24.69 0.00 41.01 3.21
3207 4446 0.179006 TGTTGGCCTGTGTGCACATA 60.179 50.000 24.69 20.05 41.01 2.29
3208 4447 0.240945 GTTGGCCTGTGTGCACATAC 59.759 55.000 24.69 11.88 41.01 2.39
3209 4448 0.110295 TTGGCCTGTGTGCACATACT 59.890 50.000 24.69 0.00 41.01 2.12
3210 4449 0.321564 TGGCCTGTGTGCACATACTC 60.322 55.000 24.69 10.68 41.01 2.59
3211 4450 0.321564 GGCCTGTGTGCACATACTCA 60.322 55.000 24.69 15.02 41.01 3.41
3212 4451 1.522668 GCCTGTGTGCACATACTCAA 58.477 50.000 24.69 4.12 41.01 3.02
3213 4452 2.086869 GCCTGTGTGCACATACTCAAT 58.913 47.619 24.69 0.00 41.01 2.57
3214 4453 2.096496 GCCTGTGTGCACATACTCAATC 59.904 50.000 24.69 7.88 41.01 2.67
3215 4454 3.603532 CCTGTGTGCACATACTCAATCT 58.396 45.455 24.69 0.00 41.01 2.40
3216 4455 4.005650 CCTGTGTGCACATACTCAATCTT 58.994 43.478 24.69 0.00 41.01 2.40
3217 4456 4.456911 CCTGTGTGCACATACTCAATCTTT 59.543 41.667 24.69 0.00 41.01 2.52
3218 4457 5.643348 CCTGTGTGCACATACTCAATCTTTA 59.357 40.000 24.69 0.00 41.01 1.85
3219 4458 6.317140 CCTGTGTGCACATACTCAATCTTTAT 59.683 38.462 24.69 0.00 41.01 1.40
3220 4459 7.495606 CCTGTGTGCACATACTCAATCTTTATA 59.504 37.037 24.69 0.00 41.01 0.98
3221 4460 8.785329 TGTGTGCACATACTCAATCTTTATAA 57.215 30.769 24.69 0.00 36.21 0.98
3222 4461 9.394767 TGTGTGCACATACTCAATCTTTATAAT 57.605 29.630 24.69 0.00 36.21 1.28
3223 4462 9.869844 GTGTGCACATACTCAATCTTTATAATC 57.130 33.333 24.69 0.00 0.00 1.75
3224 4463 9.056005 TGTGCACATACTCAATCTTTATAATCC 57.944 33.333 17.42 0.00 0.00 3.01
3225 4464 8.507249 GTGCACATACTCAATCTTTATAATCCC 58.493 37.037 13.17 0.00 0.00 3.85
3226 4465 8.217111 TGCACATACTCAATCTTTATAATCCCA 58.783 33.333 0.00 0.00 0.00 4.37
3227 4466 8.725148 GCACATACTCAATCTTTATAATCCCAG 58.275 37.037 0.00 0.00 0.00 4.45
3228 4467 8.725148 CACATACTCAATCTTTATAATCCCAGC 58.275 37.037 0.00 0.00 0.00 4.85
3229 4468 8.439971 ACATACTCAATCTTTATAATCCCAGCA 58.560 33.333 0.00 0.00 0.00 4.41
3230 4469 9.458727 CATACTCAATCTTTATAATCCCAGCAT 57.541 33.333 0.00 0.00 0.00 3.79
3231 4470 7.992754 ACTCAATCTTTATAATCCCAGCATC 57.007 36.000 0.00 0.00 0.00 3.91
3232 4471 7.520798 ACTCAATCTTTATAATCCCAGCATCA 58.479 34.615 0.00 0.00 0.00 3.07
3233 4472 8.000709 ACTCAATCTTTATAATCCCAGCATCAA 58.999 33.333 0.00 0.00 0.00 2.57
3234 4473 8.400184 TCAATCTTTATAATCCCAGCATCAAG 57.600 34.615 0.00 0.00 0.00 3.02
3235 4474 6.830873 ATCTTTATAATCCCAGCATCAAGC 57.169 37.500 0.00 0.00 46.19 4.01
3261 4500 8.905660 ATCTCTTTGATGAAGAATCGATCAAT 57.094 30.769 0.00 0.00 43.56 2.57
3262 4501 8.362860 TCTCTTTGATGAAGAATCGATCAATC 57.637 34.615 0.00 0.00 43.56 2.67
3263 4502 8.202811 TCTCTTTGATGAAGAATCGATCAATCT 58.797 33.333 0.00 0.00 43.56 2.40
3264 4503 8.362860 TCTTTGATGAAGAATCGATCAATCTC 57.637 34.615 0.00 0.00 41.34 2.75
3265 4504 8.202811 TCTTTGATGAAGAATCGATCAATCTCT 58.797 33.333 0.00 0.00 41.34 3.10
3266 4505 9.473640 CTTTGATGAAGAATCGATCAATCTCTA 57.526 33.333 0.00 0.00 38.22 2.43
3267 4506 8.809159 TTGATGAAGAATCGATCAATCTCTAC 57.191 34.615 0.00 0.00 38.22 2.59
3268 4507 7.945134 TGATGAAGAATCGATCAATCTCTACA 58.055 34.615 0.00 1.17 38.22 2.74
3269 4508 8.583296 TGATGAAGAATCGATCAATCTCTACAT 58.417 33.333 0.00 5.66 38.22 2.29
3270 4509 8.760103 ATGAAGAATCGATCAATCTCTACATG 57.240 34.615 0.00 0.00 0.00 3.21
3271 4510 6.644181 TGAAGAATCGATCAATCTCTACATGC 59.356 38.462 0.00 0.00 0.00 4.06
3272 4511 6.343716 AGAATCGATCAATCTCTACATGCT 57.656 37.500 0.00 0.00 0.00 3.79
3273 4512 6.757237 AGAATCGATCAATCTCTACATGCTT 58.243 36.000 0.00 0.00 0.00 3.91
3274 4513 7.890515 AGAATCGATCAATCTCTACATGCTTA 58.109 34.615 0.00 0.00 0.00 3.09
3275 4514 8.028354 AGAATCGATCAATCTCTACATGCTTAG 58.972 37.037 0.00 0.00 0.00 2.18
3276 4515 6.641169 TCGATCAATCTCTACATGCTTAGT 57.359 37.500 0.00 0.00 0.00 2.24
3277 4516 7.043961 TCGATCAATCTCTACATGCTTAGTT 57.956 36.000 0.00 0.00 0.00 2.24
3278 4517 7.142021 TCGATCAATCTCTACATGCTTAGTTC 58.858 38.462 0.00 0.00 0.00 3.01
3279 4518 7.013750 TCGATCAATCTCTACATGCTTAGTTCT 59.986 37.037 0.00 0.00 0.00 3.01
3280 4519 7.114670 CGATCAATCTCTACATGCTTAGTTCTG 59.885 40.741 0.00 0.00 0.00 3.02
3281 4520 7.175347 TCAATCTCTACATGCTTAGTTCTGT 57.825 36.000 0.00 0.00 0.00 3.41
3282 4521 7.261325 TCAATCTCTACATGCTTAGTTCTGTC 58.739 38.462 0.00 0.00 0.00 3.51
3283 4522 6.782082 ATCTCTACATGCTTAGTTCTGTCA 57.218 37.500 0.00 0.00 0.00 3.58
3284 4523 6.782082 TCTCTACATGCTTAGTTCTGTCAT 57.218 37.500 0.00 0.00 0.00 3.06
3285 4524 6.567959 TCTCTACATGCTTAGTTCTGTCATG 58.432 40.000 0.00 0.00 40.07 3.07
3286 4525 6.153510 TCTCTACATGCTTAGTTCTGTCATGT 59.846 38.462 10.42 10.42 46.34 3.21
3287 4526 6.701340 TCTACATGCTTAGTTCTGTCATGTT 58.299 36.000 10.77 0.00 43.40 2.71
3288 4527 5.618056 ACATGCTTAGTTCTGTCATGTTG 57.382 39.130 0.00 0.00 43.40 3.33
3289 4528 4.083110 ACATGCTTAGTTCTGTCATGTTGC 60.083 41.667 0.00 0.00 43.40 4.17
3290 4529 3.475575 TGCTTAGTTCTGTCATGTTGCA 58.524 40.909 0.00 0.00 0.00 4.08
3291 4530 3.250762 TGCTTAGTTCTGTCATGTTGCAC 59.749 43.478 0.00 0.00 0.00 4.57
3292 4531 3.499918 GCTTAGTTCTGTCATGTTGCACT 59.500 43.478 0.00 0.00 0.00 4.40
3293 4532 4.612259 GCTTAGTTCTGTCATGTTGCACTG 60.612 45.833 0.00 0.00 0.00 3.66
3294 4533 2.224606 AGTTCTGTCATGTTGCACTGG 58.775 47.619 0.00 0.00 0.00 4.00
3295 4534 1.267806 GTTCTGTCATGTTGCACTGGG 59.732 52.381 0.00 0.00 0.00 4.45
3296 4535 0.473755 TCTGTCATGTTGCACTGGGT 59.526 50.000 0.00 0.00 0.00 4.51
3297 4536 1.133823 TCTGTCATGTTGCACTGGGTT 60.134 47.619 0.00 0.00 0.00 4.11
3298 4537 1.001048 CTGTCATGTTGCACTGGGTTG 60.001 52.381 0.00 0.00 0.00 3.77
3299 4538 1.032014 GTCATGTTGCACTGGGTTGT 58.968 50.000 0.00 0.00 0.00 3.32
3300 4539 1.408702 GTCATGTTGCACTGGGTTGTT 59.591 47.619 0.00 0.00 0.00 2.83
3301 4540 2.621055 GTCATGTTGCACTGGGTTGTTA 59.379 45.455 0.00 0.00 0.00 2.41
3302 4541 2.884012 TCATGTTGCACTGGGTTGTTAG 59.116 45.455 0.00 0.00 0.00 2.34
3303 4542 1.028905 TGTTGCACTGGGTTGTTAGC 58.971 50.000 0.00 0.00 0.00 3.09
3304 4543 1.318576 GTTGCACTGGGTTGTTAGCT 58.681 50.000 0.00 0.00 0.00 3.32
3305 4544 2.158740 TGTTGCACTGGGTTGTTAGCTA 60.159 45.455 0.00 0.00 0.00 3.32
3306 4545 3.081804 GTTGCACTGGGTTGTTAGCTAT 58.918 45.455 0.00 0.00 0.00 2.97
3307 4546 2.710377 TGCACTGGGTTGTTAGCTATG 58.290 47.619 0.00 0.00 0.00 2.23
3308 4547 1.401905 GCACTGGGTTGTTAGCTATGC 59.598 52.381 0.00 0.00 0.00 3.14
3309 4548 2.710377 CACTGGGTTGTTAGCTATGCA 58.290 47.619 0.00 0.00 0.00 3.96
3310 4549 3.282021 CACTGGGTTGTTAGCTATGCAT 58.718 45.455 3.79 3.79 0.00 3.96
3311 4550 4.450976 CACTGGGTTGTTAGCTATGCATA 58.549 43.478 6.20 6.20 0.00 3.14
3312 4551 5.065914 CACTGGGTTGTTAGCTATGCATAT 58.934 41.667 6.92 0.00 0.00 1.78
3313 4552 6.230472 CACTGGGTTGTTAGCTATGCATATA 58.770 40.000 6.92 0.00 0.00 0.86
3314 4553 6.369890 CACTGGGTTGTTAGCTATGCATATAG 59.630 42.308 6.92 0.00 39.44 1.31
3336 4575 1.583054 GACCTGTTGTCACACCAGAC 58.417 55.000 3.42 0.00 43.85 3.51
3337 4576 0.908910 ACCTGTTGTCACACCAGACA 59.091 50.000 3.42 0.00 46.12 3.41
3338 4577 1.490490 ACCTGTTGTCACACCAGACAT 59.510 47.619 3.42 0.00 46.90 3.06
3339 4578 2.092429 ACCTGTTGTCACACCAGACATT 60.092 45.455 3.42 0.00 46.90 2.71
3340 4579 2.549754 CCTGTTGTCACACCAGACATTC 59.450 50.000 3.42 0.00 46.90 2.67
3341 4580 3.205338 CTGTTGTCACACCAGACATTCA 58.795 45.455 0.00 0.00 46.90 2.57
3342 4581 3.205338 TGTTGTCACACCAGACATTCAG 58.795 45.455 0.00 0.00 46.90 3.02
3343 4582 3.118445 TGTTGTCACACCAGACATTCAGA 60.118 43.478 0.00 0.00 46.90 3.27
3344 4583 3.391506 TGTCACACCAGACATTCAGAG 57.608 47.619 0.00 0.00 43.18 3.35
3345 4584 2.037641 TGTCACACCAGACATTCAGAGG 59.962 50.000 0.00 0.00 43.18 3.69
3346 4585 2.037772 GTCACACCAGACATTCAGAGGT 59.962 50.000 0.00 0.00 38.40 3.85
3347 4586 2.300152 TCACACCAGACATTCAGAGGTC 59.700 50.000 0.00 0.00 36.86 3.85
3348 4587 1.625818 ACACCAGACATTCAGAGGTCC 59.374 52.381 1.68 0.00 37.29 4.46
3349 4588 1.905215 CACCAGACATTCAGAGGTCCT 59.095 52.381 0.00 0.00 37.29 3.85
3350 4589 2.304180 CACCAGACATTCAGAGGTCCTT 59.696 50.000 0.00 0.00 37.29 3.36
3351 4590 2.569404 ACCAGACATTCAGAGGTCCTTC 59.431 50.000 0.00 0.00 37.29 3.46
3352 4591 2.836981 CCAGACATTCAGAGGTCCTTCT 59.163 50.000 0.00 0.00 37.29 2.85
3353 4592 3.118811 CCAGACATTCAGAGGTCCTTCTC 60.119 52.174 0.00 0.00 37.29 2.87
3354 4593 3.768757 CAGACATTCAGAGGTCCTTCTCT 59.231 47.826 0.00 0.00 44.25 3.10
3355 4594 4.222588 CAGACATTCAGAGGTCCTTCTCTT 59.777 45.833 0.00 0.00 41.76 2.85
3356 4595 5.420421 CAGACATTCAGAGGTCCTTCTCTTA 59.580 44.000 0.00 0.00 41.76 2.10
3357 4596 5.656416 AGACATTCAGAGGTCCTTCTCTTAG 59.344 44.000 0.00 0.00 41.76 2.18
3358 4597 4.161377 ACATTCAGAGGTCCTTCTCTTAGC 59.839 45.833 0.00 0.00 41.76 3.09
3359 4598 3.458044 TCAGAGGTCCTTCTCTTAGCA 57.542 47.619 0.00 0.00 41.76 3.49
3360 4599 3.779444 TCAGAGGTCCTTCTCTTAGCAA 58.221 45.455 0.00 0.00 41.76 3.91
3361 4600 4.357325 TCAGAGGTCCTTCTCTTAGCAAT 58.643 43.478 0.00 0.00 41.76 3.56
3362 4601 4.780021 TCAGAGGTCCTTCTCTTAGCAATT 59.220 41.667 0.00 0.00 41.76 2.32
3363 4602 5.249393 TCAGAGGTCCTTCTCTTAGCAATTT 59.751 40.000 0.00 0.00 41.76 1.82
3364 4603 5.584251 CAGAGGTCCTTCTCTTAGCAATTTC 59.416 44.000 0.00 0.00 41.76 2.17
3365 4604 5.249393 AGAGGTCCTTCTCTTAGCAATTTCA 59.751 40.000 0.00 0.00 40.93 2.69
3366 4605 5.880901 AGGTCCTTCTCTTAGCAATTTCAA 58.119 37.500 0.00 0.00 0.00 2.69
3367 4606 6.488715 AGGTCCTTCTCTTAGCAATTTCAAT 58.511 36.000 0.00 0.00 0.00 2.57
3368 4607 6.950619 AGGTCCTTCTCTTAGCAATTTCAATT 59.049 34.615 0.00 0.00 0.00 2.32
3369 4608 7.121907 AGGTCCTTCTCTTAGCAATTTCAATTC 59.878 37.037 0.00 0.00 0.00 2.17
3370 4609 7.094205 GGTCCTTCTCTTAGCAATTTCAATTCA 60.094 37.037 0.00 0.00 0.00 2.57
3371 4610 7.752686 GTCCTTCTCTTAGCAATTTCAATTCAC 59.247 37.037 0.00 0.00 0.00 3.18
3372 4611 7.667219 TCCTTCTCTTAGCAATTTCAATTCACT 59.333 33.333 0.00 0.00 0.00 3.41
3373 4612 8.302438 CCTTCTCTTAGCAATTTCAATTCACTT 58.698 33.333 0.00 0.00 0.00 3.16
3376 4615 9.725019 TCTCTTAGCAATTTCAATTCACTTAGA 57.275 29.630 0.00 0.00 0.00 2.10
3379 4618 9.565213 CTTAGCAATTTCAATTCACTTAGAAGG 57.435 33.333 0.00 0.00 40.15 3.46
3380 4619 7.530426 AGCAATTTCAATTCACTTAGAAGGT 57.470 32.000 0.00 0.00 40.15 3.50
3381 4620 7.955918 AGCAATTTCAATTCACTTAGAAGGTT 58.044 30.769 0.00 0.00 40.15 3.50
3382 4621 8.424133 AGCAATTTCAATTCACTTAGAAGGTTT 58.576 29.630 0.00 0.00 40.15 3.27
3383 4622 8.703336 GCAATTTCAATTCACTTAGAAGGTTTC 58.297 33.333 0.00 0.00 40.15 2.78
3384 4623 9.971922 CAATTTCAATTCACTTAGAAGGTTTCT 57.028 29.630 0.00 0.00 40.15 2.52
3386 4625 8.746052 TTTCAATTCACTTAGAAGGTTTCTCA 57.254 30.769 0.00 0.00 40.15 3.27
3387 4626 7.730364 TCAATTCACTTAGAAGGTTTCTCAC 57.270 36.000 0.00 0.00 40.15 3.51
3398 4637 2.863809 GGTTTCTCACCCACAACATCT 58.136 47.619 0.00 0.00 40.19 2.90
3399 4638 2.814336 GGTTTCTCACCCACAACATCTC 59.186 50.000 0.00 0.00 40.19 2.75
3400 4639 3.476552 GTTTCTCACCCACAACATCTCA 58.523 45.455 0.00 0.00 0.00 3.27
3401 4640 4.074970 GTTTCTCACCCACAACATCTCAT 58.925 43.478 0.00 0.00 0.00 2.90
3402 4641 4.371624 TTCTCACCCACAACATCTCATT 57.628 40.909 0.00 0.00 0.00 2.57
3403 4642 4.371624 TCTCACCCACAACATCTCATTT 57.628 40.909 0.00 0.00 0.00 2.32
3404 4643 5.497464 TCTCACCCACAACATCTCATTTA 57.503 39.130 0.00 0.00 0.00 1.40
3405 4644 5.875224 TCTCACCCACAACATCTCATTTAA 58.125 37.500 0.00 0.00 0.00 1.52
3406 4645 5.705441 TCTCACCCACAACATCTCATTTAAC 59.295 40.000 0.00 0.00 0.00 2.01
3407 4646 4.764823 TCACCCACAACATCTCATTTAACC 59.235 41.667 0.00 0.00 0.00 2.85
3408 4647 4.082245 CACCCACAACATCTCATTTAACCC 60.082 45.833 0.00 0.00 0.00 4.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 572 2.659428 GATTGCAAGCCTTGTCCCTAT 58.341 47.619 2.49 0.00 0.00 2.57
307 751 7.822161 TTGGTGCTATATGATGCAACTAAAT 57.178 32.000 13.60 0.00 46.08 1.40
367 811 5.776173 GAGATCTTCGAAACTAGATCCCA 57.224 43.478 17.33 0.00 45.05 4.37
637 1105 1.270839 GCATCACCACCGTATAGCCAT 60.271 52.381 0.00 0.00 0.00 4.40
640 1115 2.135933 GAAGCATCACCACCGTATAGC 58.864 52.381 0.00 0.00 0.00 2.97
641 1116 2.102420 TGGAAGCATCACCACCGTATAG 59.898 50.000 0.00 0.00 0.00 1.31
642 1117 2.112190 TGGAAGCATCACCACCGTATA 58.888 47.619 0.00 0.00 0.00 1.47
643 1118 0.908910 TGGAAGCATCACCACCGTAT 59.091 50.000 0.00 0.00 0.00 3.06
644 1119 0.908910 ATGGAAGCATCACCACCGTA 59.091 50.000 0.00 0.00 39.06 4.02
645 1120 0.908910 TATGGAAGCATCACCACCGT 59.091 50.000 0.00 0.00 39.06 4.83
646 1121 1.134401 ACTATGGAAGCATCACCACCG 60.134 52.381 0.00 0.00 39.06 4.94
749 1224 4.587189 GCGATCGGGGAGAACGGG 62.587 72.222 18.30 0.00 44.00 5.28
753 1229 3.833645 CACGGCGATCGGGGAGAA 61.834 66.667 16.62 0.00 44.45 2.87
819 1295 3.766691 GCGGCCGGAGTTGGTAGA 61.767 66.667 29.38 0.00 0.00 2.59
841 1317 2.032071 CGGACCTGGGTTGGTGAC 59.968 66.667 0.00 0.00 41.00 3.67
873 1361 0.033228 GCGGATCTGATGTGGAGGAG 59.967 60.000 5.48 0.00 0.00 3.69
874 1362 1.402896 GGCGGATCTGATGTGGAGGA 61.403 60.000 5.48 0.00 0.00 3.71
875 1363 1.070445 GGCGGATCTGATGTGGAGG 59.930 63.158 5.48 0.00 0.00 4.30
876 1364 1.300465 CGGCGGATCTGATGTGGAG 60.300 63.158 5.48 0.00 0.00 3.86
877 1365 2.814604 CGGCGGATCTGATGTGGA 59.185 61.111 5.48 0.00 0.00 4.02
878 1366 2.969238 GCGGCGGATCTGATGTGG 60.969 66.667 9.78 0.00 0.00 4.17
879 1367 1.953138 GAGCGGCGGATCTGATGTG 60.953 63.158 9.78 0.00 0.00 3.21
880 1368 2.419198 GAGCGGCGGATCTGATGT 59.581 61.111 9.78 0.00 0.00 3.06
881 1369 2.356793 GGAGCGGCGGATCTGATG 60.357 66.667 9.78 0.00 0.00 3.07
882 1370 3.620785 GGGAGCGGCGGATCTGAT 61.621 66.667 9.78 0.00 0.00 2.90
884 1372 4.899239 GTGGGAGCGGCGGATCTG 62.899 72.222 9.78 0.00 0.00 2.90
1226 1722 3.696426 GCTGAATCGCGCTAGCCG 61.696 66.667 9.66 13.81 41.18 5.52
1246 1751 2.099427 GACTGTCGGGTATCCTTCTCAC 59.901 54.545 0.00 0.00 0.00 3.51
1591 2135 1.078759 GACCGTCGTTGCTGATCCAG 61.079 60.000 0.00 0.00 34.12 3.86
1608 2158 0.040603 AGACGACTTGGAACGACGAC 60.041 55.000 0.00 0.00 0.00 4.34
1609 2159 0.664761 AAGACGACTTGGAACGACGA 59.335 50.000 0.00 0.00 34.80 4.20
1706 2259 0.751643 GTGTGAAACCTGGTGGCACT 60.752 55.000 24.00 0.00 36.63 4.40
1729 2288 1.895020 GCATACGGTCCACACCTGGA 61.895 60.000 0.00 0.00 45.11 3.86
1926 2486 5.105063 TCATCTCGTATGCTCACAAAAGAG 58.895 41.667 0.00 0.00 38.68 2.85
2012 2572 2.674380 GCAACCACCCTCCTGCAG 60.674 66.667 6.78 6.78 34.87 4.41
2148 2708 0.040425 CGACCAACGCCTTTTCCTTG 60.040 55.000 0.00 0.00 34.51 3.61
2270 2830 0.249489 ATACGCGCAAGGACTGATCC 60.249 55.000 5.73 0.00 46.69 3.36
2352 2912 7.064016 GTGTGGACAAGTTTTTAAGAAATTGCA 59.936 33.333 16.13 6.89 37.93 4.08
2353 2913 7.064016 TGTGTGGACAAGTTTTTAAGAAATTGC 59.936 33.333 16.13 10.28 37.93 3.56
2373 2933 4.517952 TTAAATCCAACATGCTGTGTGG 57.482 40.909 0.00 0.00 41.14 4.17
2454 3014 4.301628 CCCAAAAAGAAACATCAGCTGTC 58.698 43.478 14.67 3.12 36.98 3.51
2531 3091 5.210715 CAGCATCACAGAAAGTTTCAGTTC 58.789 41.667 17.65 5.23 0.00 3.01
2536 3098 6.291269 CGAAAAACAGCATCACAGAAAGTTTC 60.291 38.462 7.57 7.57 0.00 2.78
2548 3110 3.896648 TTCCAGACGAAAAACAGCATC 57.103 42.857 0.00 0.00 0.00 3.91
2552 3114 4.275936 ACCAGAATTCCAGACGAAAAACAG 59.724 41.667 0.65 0.00 33.08 3.16
2566 3128 8.169268 CGTAAACAATCTTCTACACCAGAATTC 58.831 37.037 0.00 0.00 42.44 2.17
2574 3136 8.240883 AGTCATTCGTAAACAATCTTCTACAC 57.759 34.615 0.00 0.00 0.00 2.90
2592 3154 3.426695 GCACATGGCAGTTGTAGTCATTC 60.427 47.826 0.00 0.00 43.97 2.67
2593 3155 2.489329 GCACATGGCAGTTGTAGTCATT 59.511 45.455 0.00 0.00 43.97 2.57
2594 3156 2.086869 GCACATGGCAGTTGTAGTCAT 58.913 47.619 0.00 0.00 43.97 3.06
2598 3160 7.225427 AACTGAAAGCACATGGCAGTTGTAG 62.225 44.000 0.00 0.00 45.12 2.74
2600 3162 4.749346 AACTGAAAGCACATGGCAGTTGT 61.749 43.478 0.00 0.00 45.12 3.32
2629 3191 9.499369 ACTGATATGCATTTCTACCCTAGATAT 57.501 33.333 16.62 0.00 34.22 1.63
2638 3200 8.879342 AGTTAGACACTGATATGCATTTCTAC 57.121 34.615 16.62 5.51 32.83 2.59
2660 3223 9.453572 ACAATGTTGATGAGATTACATACAGTT 57.546 29.630 0.00 0.00 31.40 3.16
2663 3226 9.447157 TTCACAATGTTGATGAGATTACATACA 57.553 29.630 0.00 0.00 31.40 2.29
2724 3288 5.632764 TGGCATGTCAAATTTAACGACATTG 59.367 36.000 16.08 13.28 45.69 2.82
2730 3294 6.146216 TGTAGTTGGCATGTCAAATTTAACG 58.854 36.000 18.99 0.00 0.00 3.18
2753 3317 0.868406 GGCAGACAAAGACCGTTCTG 59.132 55.000 0.00 0.00 29.98 3.02
2754 3318 0.600255 CGGCAGACAAAGACCGTTCT 60.600 55.000 0.00 0.00 40.77 3.01
2820 4058 4.039004 TGCTATGCTTGTGTTGGATTTGTT 59.961 37.500 0.00 0.00 0.00 2.83
2822 4060 3.922240 GTGCTATGCTTGTGTTGGATTTG 59.078 43.478 0.00 0.00 0.00 2.32
2823 4061 3.828451 AGTGCTATGCTTGTGTTGGATTT 59.172 39.130 0.00 0.00 0.00 2.17
2828 4066 1.401931 GCCAGTGCTATGCTTGTGTTG 60.402 52.381 0.00 0.00 33.53 3.33
2839 4078 1.207488 ACCAGATTGGGCCAGTGCTA 61.207 55.000 6.15 0.00 43.37 3.49
2859 4098 5.067153 CACTCATCCAAGTTTGGTTGTGTTA 59.933 40.000 19.37 4.76 45.28 2.41
2879 4118 4.023365 AGCTTCAACTTTCAAGCATCACTC 60.023 41.667 0.22 0.00 46.37 3.51
2880 4119 3.887716 AGCTTCAACTTTCAAGCATCACT 59.112 39.130 0.22 0.00 46.37 3.41
2891 4130 7.067008 ACACTTACATGTTGTAGCTTCAACTTT 59.933 33.333 29.06 17.78 45.26 2.66
2917 4156 1.968493 ACGCTACTCCTCCAAGTTCAA 59.032 47.619 0.00 0.00 0.00 2.69
2918 4157 1.629043 ACGCTACTCCTCCAAGTTCA 58.371 50.000 0.00 0.00 0.00 3.18
2919 4158 2.159268 GGTACGCTACTCCTCCAAGTTC 60.159 54.545 0.00 0.00 0.00 3.01
2920 4159 1.823610 GGTACGCTACTCCTCCAAGTT 59.176 52.381 0.00 0.00 0.00 2.66
2921 4160 1.272313 TGGTACGCTACTCCTCCAAGT 60.272 52.381 0.00 0.00 0.00 3.16
2922 4161 1.405821 CTGGTACGCTACTCCTCCAAG 59.594 57.143 0.00 0.00 0.00 3.61
2923 4162 1.471119 CTGGTACGCTACTCCTCCAA 58.529 55.000 0.00 0.00 0.00 3.53
2924 4163 0.395311 CCTGGTACGCTACTCCTCCA 60.395 60.000 0.00 0.00 0.00 3.86
2925 4164 0.106819 TCCTGGTACGCTACTCCTCC 60.107 60.000 0.00 0.00 0.00 4.30
2926 4165 1.310904 CTCCTGGTACGCTACTCCTC 58.689 60.000 0.00 0.00 0.00 3.71
2927 4166 0.752376 GCTCCTGGTACGCTACTCCT 60.752 60.000 0.00 0.00 0.00 3.69
2928 4167 1.035932 TGCTCCTGGTACGCTACTCC 61.036 60.000 0.00 0.00 0.00 3.85
2929 4168 0.382515 CTGCTCCTGGTACGCTACTC 59.617 60.000 0.00 0.00 0.00 2.59
2930 4169 1.668101 GCTGCTCCTGGTACGCTACT 61.668 60.000 0.00 0.00 0.00 2.57
2931 4170 1.227002 GCTGCTCCTGGTACGCTAC 60.227 63.158 0.00 0.00 0.00 3.58
2932 4171 1.379977 AGCTGCTCCTGGTACGCTA 60.380 57.895 0.00 0.00 0.00 4.26
2933 4172 2.681778 AGCTGCTCCTGGTACGCT 60.682 61.111 0.00 0.00 0.00 5.07
2934 4173 2.510238 CAGCTGCTCCTGGTACGC 60.510 66.667 0.00 0.00 0.00 4.42
2935 4174 2.510238 GCAGCTGCTCCTGGTACG 60.510 66.667 31.33 0.00 38.21 3.67
2945 4184 0.383231 AAAGACACAACAGCAGCTGC 59.617 50.000 31.53 31.53 42.49 5.25
2946 4185 1.945394 AGAAAGACACAACAGCAGCTG 59.055 47.619 21.54 21.54 37.52 4.24
2947 4186 2.338577 AGAAAGACACAACAGCAGCT 57.661 45.000 0.00 0.00 0.00 4.24
2948 4187 2.542411 CCAAGAAAGACACAACAGCAGC 60.542 50.000 0.00 0.00 0.00 5.25
2949 4188 2.684881 ACCAAGAAAGACACAACAGCAG 59.315 45.455 0.00 0.00 0.00 4.24
2950 4189 2.423185 CACCAAGAAAGACACAACAGCA 59.577 45.455 0.00 0.00 0.00 4.41
2951 4190 2.423538 ACACCAAGAAAGACACAACAGC 59.576 45.455 0.00 0.00 0.00 4.40
2952 4191 3.440173 ACACACCAAGAAAGACACAACAG 59.560 43.478 0.00 0.00 0.00 3.16
2953 4192 3.190327 CACACACCAAGAAAGACACAACA 59.810 43.478 0.00 0.00 0.00 3.33
2954 4193 3.427503 CCACACACCAAGAAAGACACAAC 60.428 47.826 0.00 0.00 0.00 3.32
2955 4194 2.752354 CCACACACCAAGAAAGACACAA 59.248 45.455 0.00 0.00 0.00 3.33
2956 4195 2.364632 CCACACACCAAGAAAGACACA 58.635 47.619 0.00 0.00 0.00 3.72
2957 4196 1.065551 GCCACACACCAAGAAAGACAC 59.934 52.381 0.00 0.00 0.00 3.67
2958 4197 1.388547 GCCACACACCAAGAAAGACA 58.611 50.000 0.00 0.00 0.00 3.41
2959 4198 0.307760 CGCCACACACCAAGAAAGAC 59.692 55.000 0.00 0.00 0.00 3.01
2960 4199 0.817634 CCGCCACACACCAAGAAAGA 60.818 55.000 0.00 0.00 0.00 2.52
2961 4200 1.654220 CCGCCACACACCAAGAAAG 59.346 57.895 0.00 0.00 0.00 2.62
2962 4201 2.485795 GCCGCCACACACCAAGAAA 61.486 57.895 0.00 0.00 0.00 2.52
2963 4202 2.904866 GCCGCCACACACCAAGAA 60.905 61.111 0.00 0.00 0.00 2.52
2964 4203 3.825160 GAGCCGCCACACACCAAGA 62.825 63.158 0.00 0.00 0.00 3.02
2965 4204 3.357079 GAGCCGCCACACACCAAG 61.357 66.667 0.00 0.00 0.00 3.61
2966 4205 3.825160 GAGAGCCGCCACACACCAA 62.825 63.158 0.00 0.00 0.00 3.67
2967 4206 4.314440 GAGAGCCGCCACACACCA 62.314 66.667 0.00 0.00 0.00 4.17
2968 4207 4.314440 TGAGAGCCGCCACACACC 62.314 66.667 0.00 0.00 0.00 4.16
2969 4208 3.044305 GTGAGAGCCGCCACACAC 61.044 66.667 0.00 4.39 33.72 3.82
2970 4209 4.662961 CGTGAGAGCCGCCACACA 62.663 66.667 11.01 0.00 33.13 3.72
2973 4212 4.373116 TTCCGTGAGAGCCGCCAC 62.373 66.667 0.00 0.00 0.00 5.01
2974 4213 4.373116 GTTCCGTGAGAGCCGCCA 62.373 66.667 0.00 0.00 0.00 5.69
2975 4214 4.373116 TGTTCCGTGAGAGCCGCC 62.373 66.667 0.00 0.00 0.00 6.13
2976 4215 2.811317 CTGTTCCGTGAGAGCCGC 60.811 66.667 0.00 0.00 0.00 6.53
2977 4216 1.153939 CTCTGTTCCGTGAGAGCCG 60.154 63.158 0.00 0.00 32.44 5.52
2978 4217 1.216710 CCTCTGTTCCGTGAGAGCC 59.783 63.158 0.00 0.00 35.34 4.70
2979 4218 0.172352 CTCCTCTGTTCCGTGAGAGC 59.828 60.000 0.00 0.00 35.34 4.09
2980 4219 0.814457 CCTCCTCTGTTCCGTGAGAG 59.186 60.000 0.00 0.00 36.28 3.20
2981 4220 0.404426 TCCTCCTCTGTTCCGTGAGA 59.596 55.000 0.00 0.00 32.44 3.27
2982 4221 0.814457 CTCCTCCTCTGTTCCGTGAG 59.186 60.000 0.00 0.00 0.00 3.51
2983 4222 0.612174 CCTCCTCCTCTGTTCCGTGA 60.612 60.000 0.00 0.00 0.00 4.35
2984 4223 0.612174 TCCTCCTCCTCTGTTCCGTG 60.612 60.000 0.00 0.00 0.00 4.94
2985 4224 0.323908 CTCCTCCTCCTCTGTTCCGT 60.324 60.000 0.00 0.00 0.00 4.69
2986 4225 1.671901 GCTCCTCCTCCTCTGTTCCG 61.672 65.000 0.00 0.00 0.00 4.30
2987 4226 0.325203 AGCTCCTCCTCCTCTGTTCC 60.325 60.000 0.00 0.00 0.00 3.62
2988 4227 1.111277 GAGCTCCTCCTCCTCTGTTC 58.889 60.000 0.87 0.00 0.00 3.18
2989 4228 0.325203 GGAGCTCCTCCTCCTCTGTT 60.325 60.000 26.25 0.00 46.41 3.16
2990 4229 1.309688 GGAGCTCCTCCTCCTCTGT 59.690 63.158 26.25 0.00 46.41 3.41
2991 4230 4.275781 GGAGCTCCTCCTCCTCTG 57.724 66.667 26.25 0.00 46.41 3.35
3008 4247 6.538021 CCATGAGAAATGTTGACCTAGAAGAG 59.462 42.308 0.00 0.00 0.00 2.85
3009 4248 6.409704 CCATGAGAAATGTTGACCTAGAAGA 58.590 40.000 0.00 0.00 0.00 2.87
3010 4249 5.587844 CCCATGAGAAATGTTGACCTAGAAG 59.412 44.000 0.00 0.00 0.00 2.85
3011 4250 5.500234 CCCATGAGAAATGTTGACCTAGAA 58.500 41.667 0.00 0.00 0.00 2.10
3012 4251 4.626287 GCCCATGAGAAATGTTGACCTAGA 60.626 45.833 0.00 0.00 0.00 2.43
3013 4252 3.629398 GCCCATGAGAAATGTTGACCTAG 59.371 47.826 0.00 0.00 0.00 3.02
3014 4253 3.266772 AGCCCATGAGAAATGTTGACCTA 59.733 43.478 0.00 0.00 0.00 3.08
3015 4254 2.042162 AGCCCATGAGAAATGTTGACCT 59.958 45.455 0.00 0.00 0.00 3.85
3016 4255 2.450476 AGCCCATGAGAAATGTTGACC 58.550 47.619 0.00 0.00 0.00 4.02
3017 4256 3.367703 CCAAGCCCATGAGAAATGTTGAC 60.368 47.826 0.00 0.00 0.00 3.18
3018 4257 2.827322 CCAAGCCCATGAGAAATGTTGA 59.173 45.455 0.00 0.00 0.00 3.18
3019 4258 2.093869 CCCAAGCCCATGAGAAATGTTG 60.094 50.000 0.00 0.00 0.00 3.33
3020 4259 2.181975 CCCAAGCCCATGAGAAATGTT 58.818 47.619 0.00 0.00 0.00 2.71
3021 4260 1.856629 CCCAAGCCCATGAGAAATGT 58.143 50.000 0.00 0.00 0.00 2.71
3022 4261 0.462789 GCCCAAGCCCATGAGAAATG 59.537 55.000 0.00 0.00 0.00 2.32
3023 4262 2.906268 GCCCAAGCCCATGAGAAAT 58.094 52.632 0.00 0.00 0.00 2.17
3024 4263 4.440145 GCCCAAGCCCATGAGAAA 57.560 55.556 0.00 0.00 0.00 2.52
3034 4273 2.849294 CCTATCTCTTAGGCCCAAGC 57.151 55.000 5.98 0.00 41.20 4.01
3042 4281 5.329399 AGCCCATCTGTACCTATCTCTTAG 58.671 45.833 0.00 0.00 0.00 2.18
3043 4282 5.340891 AGCCCATCTGTACCTATCTCTTA 57.659 43.478 0.00 0.00 0.00 2.10
3044 4283 4.206244 AGCCCATCTGTACCTATCTCTT 57.794 45.455 0.00 0.00 0.00 2.85
3045 4284 3.913370 AGCCCATCTGTACCTATCTCT 57.087 47.619 0.00 0.00 0.00 3.10
3046 4285 4.020543 CCTAGCCCATCTGTACCTATCTC 58.979 52.174 0.00 0.00 0.00 2.75
3047 4286 3.245803 CCCTAGCCCATCTGTACCTATCT 60.246 52.174 0.00 0.00 0.00 1.98
3048 4287 3.100671 CCCTAGCCCATCTGTACCTATC 58.899 54.545 0.00 0.00 0.00 2.08
3049 4288 2.827390 GCCCTAGCCCATCTGTACCTAT 60.827 54.545 0.00 0.00 0.00 2.57
3050 4289 1.482553 GCCCTAGCCCATCTGTACCTA 60.483 57.143 0.00 0.00 0.00 3.08
3051 4290 0.764752 GCCCTAGCCCATCTGTACCT 60.765 60.000 0.00 0.00 0.00 3.08
3052 4291 1.755384 GCCCTAGCCCATCTGTACC 59.245 63.158 0.00 0.00 0.00 3.34
3063 4302 2.393144 GAACCGGTATGGGCCCTAGC 62.393 65.000 25.70 19.83 44.64 3.42
3064 4303 1.052124 TGAACCGGTATGGGCCCTAG 61.052 60.000 25.70 9.38 44.64 3.02
3065 4304 0.620990 TTGAACCGGTATGGGCCCTA 60.621 55.000 25.70 10.18 44.64 3.53
3066 4305 1.926489 TTGAACCGGTATGGGCCCT 60.926 57.895 25.70 11.37 44.64 5.19
3067 4306 1.751544 GTTGAACCGGTATGGGCCC 60.752 63.158 17.59 17.59 44.64 5.80
3068 4307 1.001887 TGTTGAACCGGTATGGGCC 60.002 57.895 8.00 0.00 44.64 5.80
3069 4308 0.322187 AGTGTTGAACCGGTATGGGC 60.322 55.000 8.00 0.00 44.64 5.36
3070 4309 1.677820 GGAGTGTTGAACCGGTATGGG 60.678 57.143 8.00 0.00 44.64 4.00
3071 4310 1.677820 GGGAGTGTTGAACCGGTATGG 60.678 57.143 8.00 0.00 46.41 2.74
3072 4311 1.677820 GGGGAGTGTTGAACCGGTATG 60.678 57.143 8.00 0.00 0.00 2.39
3073 4312 0.616891 GGGGAGTGTTGAACCGGTAT 59.383 55.000 8.00 0.00 0.00 2.73
3074 4313 1.482748 GGGGGAGTGTTGAACCGGTA 61.483 60.000 8.00 0.00 0.00 4.02
3075 4314 2.826003 GGGGGAGTGTTGAACCGGT 61.826 63.158 0.00 0.00 0.00 5.28
3076 4315 2.033602 GGGGGAGTGTTGAACCGG 59.966 66.667 0.00 0.00 0.00 5.28
3077 4316 1.003718 GAGGGGGAGTGTTGAACCG 60.004 63.158 0.00 0.00 0.00 4.44
3078 4317 0.476771 TTGAGGGGGAGTGTTGAACC 59.523 55.000 0.00 0.00 0.00 3.62
3079 4318 1.420138 TCTTGAGGGGGAGTGTTGAAC 59.580 52.381 0.00 0.00 0.00 3.18
3080 4319 1.814429 TCTTGAGGGGGAGTGTTGAA 58.186 50.000 0.00 0.00 0.00 2.69
3081 4320 1.630369 CATCTTGAGGGGGAGTGTTGA 59.370 52.381 0.00 0.00 0.00 3.18
3082 4321 1.340405 CCATCTTGAGGGGGAGTGTTG 60.340 57.143 0.00 0.00 0.00 3.33
3083 4322 0.995024 CCATCTTGAGGGGGAGTGTT 59.005 55.000 0.00 0.00 0.00 3.32
3084 4323 0.916358 CCCATCTTGAGGGGGAGTGT 60.916 60.000 12.16 0.00 45.08 3.55
3085 4324 1.918253 CCCATCTTGAGGGGGAGTG 59.082 63.158 12.16 0.00 45.08 3.51
3086 4325 4.508065 CCCATCTTGAGGGGGAGT 57.492 61.111 12.16 0.00 45.08 3.85
3092 4331 5.090139 AGATATCTACCACCCATCTTGAGG 58.910 45.833 2.53 0.00 0.00 3.86
3093 4332 7.617329 TGATAGATATCTACCACCCATCTTGAG 59.383 40.741 14.71 0.00 33.88 3.02
3094 4333 7.478721 TGATAGATATCTACCACCCATCTTGA 58.521 38.462 14.71 0.00 33.88 3.02
3095 4334 7.724490 TGATAGATATCTACCACCCATCTTG 57.276 40.000 14.71 0.00 33.88 3.02
3096 4335 8.923838 AATGATAGATATCTACCACCCATCTT 57.076 34.615 14.71 0.00 33.88 2.40
3097 4336 7.566879 GGAATGATAGATATCTACCACCCATCT 59.433 40.741 14.71 0.00 33.88 2.90
3098 4337 7.202047 GGGAATGATAGATATCTACCACCCATC 60.202 44.444 20.94 12.75 33.88 3.51
3099 4338 6.617371 GGGAATGATAGATATCTACCACCCAT 59.383 42.308 20.94 13.74 33.88 4.00
3100 4339 5.964477 GGGAATGATAGATATCTACCACCCA 59.036 44.000 20.94 12.51 33.88 4.51
3101 4340 5.964477 TGGGAATGATAGATATCTACCACCC 59.036 44.000 19.75 19.75 33.88 4.61
3102 4341 7.566879 AGATGGGAATGATAGATATCTACCACC 59.433 40.741 14.71 9.54 33.88 4.61
3103 4342 8.546083 AGATGGGAATGATAGATATCTACCAC 57.454 38.462 14.71 9.80 33.88 4.16
3104 4343 8.985922 CAAGATGGGAATGATAGATATCTACCA 58.014 37.037 14.71 12.03 33.88 3.25
3105 4344 8.986991 ACAAGATGGGAATGATAGATATCTACC 58.013 37.037 14.71 5.83 33.88 3.18
3107 4346 8.907885 CGACAAGATGGGAATGATAGATATCTA 58.092 37.037 14.76 14.76 33.88 1.98
3108 4347 7.632462 GCGACAAGATGGGAATGATAGATATCT 60.632 40.741 10.73 10.73 33.88 1.98
3109 4348 6.478344 GCGACAAGATGGGAATGATAGATATC 59.522 42.308 0.00 0.00 0.00 1.63
3110 4349 6.070596 TGCGACAAGATGGGAATGATAGATAT 60.071 38.462 0.00 0.00 0.00 1.63
3111 4350 5.245977 TGCGACAAGATGGGAATGATAGATA 59.754 40.000 0.00 0.00 0.00 1.98
3112 4351 4.040829 TGCGACAAGATGGGAATGATAGAT 59.959 41.667 0.00 0.00 0.00 1.98
3113 4352 3.387699 TGCGACAAGATGGGAATGATAGA 59.612 43.478 0.00 0.00 0.00 1.98
3114 4353 3.732212 TGCGACAAGATGGGAATGATAG 58.268 45.455 0.00 0.00 0.00 2.08
3115 4354 3.836365 TGCGACAAGATGGGAATGATA 57.164 42.857 0.00 0.00 0.00 2.15
3116 4355 2.715749 TGCGACAAGATGGGAATGAT 57.284 45.000 0.00 0.00 0.00 2.45
3117 4356 2.358957 CTTGCGACAAGATGGGAATGA 58.641 47.619 12.43 0.00 0.00 2.57
3118 4357 1.202222 GCTTGCGACAAGATGGGAATG 60.202 52.381 19.38 0.00 0.00 2.67
3119 4358 1.098050 GCTTGCGACAAGATGGGAAT 58.902 50.000 19.38 0.00 0.00 3.01
3120 4359 0.036732 AGCTTGCGACAAGATGGGAA 59.963 50.000 19.38 0.00 0.00 3.97
3121 4360 0.901827 TAGCTTGCGACAAGATGGGA 59.098 50.000 19.38 0.67 0.00 4.37
3122 4361 1.293924 CTAGCTTGCGACAAGATGGG 58.706 55.000 19.38 9.63 0.00 4.00
3123 4362 1.293924 CCTAGCTTGCGACAAGATGG 58.706 55.000 19.38 15.57 0.00 3.51
3124 4363 2.015736 ACCTAGCTTGCGACAAGATG 57.984 50.000 19.38 8.14 0.00 2.90
3125 4364 2.350522 CAACCTAGCTTGCGACAAGAT 58.649 47.619 19.38 16.36 0.00 2.40
3126 4365 1.795768 CAACCTAGCTTGCGACAAGA 58.204 50.000 19.38 3.31 0.00 3.02
3127 4366 0.166814 GCAACCTAGCTTGCGACAAG 59.833 55.000 7.00 13.18 37.41 3.16
3128 4367 2.244000 GCAACCTAGCTTGCGACAA 58.756 52.632 7.00 0.00 37.41 3.18
3129 4368 3.966215 GCAACCTAGCTTGCGACA 58.034 55.556 7.00 0.00 37.41 4.35
3133 4372 1.467920 AGGAATGCAACCTAGCTTGC 58.532 50.000 14.67 14.67 45.80 4.01
3134 4373 3.841643 CAAAGGAATGCAACCTAGCTTG 58.158 45.455 14.69 12.00 36.67 4.01
3135 4374 2.232208 GCAAAGGAATGCAACCTAGCTT 59.768 45.455 21.65 10.85 45.70 3.74
3136 4375 1.821136 GCAAAGGAATGCAACCTAGCT 59.179 47.619 21.65 0.00 45.70 3.32
3137 4376 2.284263 GCAAAGGAATGCAACCTAGC 57.716 50.000 14.69 16.42 45.70 3.42
3145 4384 1.150827 GTTTGGCAGCAAAGGAATGC 58.849 50.000 0.00 0.00 46.78 3.56
3146 4385 1.345415 AGGTTTGGCAGCAAAGGAATG 59.655 47.619 0.00 0.00 0.00 2.67
3147 4386 1.720781 AGGTTTGGCAGCAAAGGAAT 58.279 45.000 0.00 0.00 0.00 3.01
3148 4387 1.494960 AAGGTTTGGCAGCAAAGGAA 58.505 45.000 0.00 0.00 0.00 3.36
3149 4388 1.494960 AAAGGTTTGGCAGCAAAGGA 58.505 45.000 0.00 0.00 0.00 3.36
3150 4389 1.941975 CAAAAGGTTTGGCAGCAAAGG 59.058 47.619 0.00 0.00 0.00 3.11
3151 4390 2.609002 GACAAAAGGTTTGGCAGCAAAG 59.391 45.455 1.64 0.00 0.00 2.77
3152 4391 2.027745 TGACAAAAGGTTTGGCAGCAAA 60.028 40.909 5.15 0.00 31.42 3.68
3153 4392 1.552337 TGACAAAAGGTTTGGCAGCAA 59.448 42.857 5.15 0.00 31.42 3.91
3154 4393 1.189752 TGACAAAAGGTTTGGCAGCA 58.810 45.000 5.15 0.00 31.42 4.41
3155 4394 2.204237 CTTGACAAAAGGTTTGGCAGC 58.796 47.619 9.10 0.00 38.86 5.25
3156 4395 2.204237 GCTTGACAAAAGGTTTGGCAG 58.796 47.619 9.10 5.75 38.86 4.85
3157 4396 1.552337 TGCTTGACAAAAGGTTTGGCA 59.448 42.857 5.15 5.15 35.27 4.92
3158 4397 2.204237 CTGCTTGACAAAAGGTTTGGC 58.796 47.619 5.76 2.78 0.00 4.52
3159 4398 3.131046 AGACTGCTTGACAAAAGGTTTGG 59.869 43.478 5.76 0.00 0.00 3.28
3160 4399 4.107622 CAGACTGCTTGACAAAAGGTTTG 58.892 43.478 0.00 0.00 0.00 2.93
3161 4400 3.429410 GCAGACTGCTTGACAAAAGGTTT 60.429 43.478 20.41 0.00 40.96 3.27
3162 4401 2.099756 GCAGACTGCTTGACAAAAGGTT 59.900 45.455 20.41 0.00 40.96 3.50
3163 4402 1.678101 GCAGACTGCTTGACAAAAGGT 59.322 47.619 20.41 0.00 40.96 3.50
3164 4403 2.412421 GCAGACTGCTTGACAAAAGG 57.588 50.000 20.41 0.00 40.96 3.11
3175 4414 1.012841 GCCAACAGATAGCAGACTGC 58.987 55.000 20.12 20.12 45.46 4.40
3176 4415 1.209019 AGGCCAACAGATAGCAGACTG 59.791 52.381 5.01 0.00 39.65 3.51
3177 4416 1.209019 CAGGCCAACAGATAGCAGACT 59.791 52.381 5.01 0.00 0.00 3.24
3178 4417 1.065854 ACAGGCCAACAGATAGCAGAC 60.066 52.381 5.01 0.00 0.00 3.51
3179 4418 1.065926 CACAGGCCAACAGATAGCAGA 60.066 52.381 5.01 0.00 0.00 4.26
3180 4419 1.339438 ACACAGGCCAACAGATAGCAG 60.339 52.381 5.01 0.00 0.00 4.24
3181 4420 0.692476 ACACAGGCCAACAGATAGCA 59.308 50.000 5.01 0.00 0.00 3.49
3182 4421 1.089920 CACACAGGCCAACAGATAGC 58.910 55.000 5.01 0.00 0.00 2.97
3183 4422 1.089920 GCACACAGGCCAACAGATAG 58.910 55.000 5.01 0.00 0.00 2.08
3184 4423 0.399833 TGCACACAGGCCAACAGATA 59.600 50.000 5.01 0.00 0.00 1.98
3185 4424 1.151221 TGCACACAGGCCAACAGAT 59.849 52.632 5.01 0.00 0.00 2.90
3186 4425 1.823470 GTGCACACAGGCCAACAGA 60.823 57.895 13.17 0.00 0.00 3.41
3187 4426 1.457823 ATGTGCACACAGGCCAACAG 61.458 55.000 24.37 0.00 45.48 3.16
3188 4427 0.179006 TATGTGCACACAGGCCAACA 60.179 50.000 24.37 0.00 45.48 3.33
3189 4428 0.240945 GTATGTGCACACAGGCCAAC 59.759 55.000 24.37 8.06 45.48 3.77
3190 4429 0.110295 AGTATGTGCACACAGGCCAA 59.890 50.000 24.37 0.00 45.48 4.52
3191 4430 0.321564 GAGTATGTGCACACAGGCCA 60.322 55.000 24.37 0.00 45.48 5.36
3192 4431 0.321564 TGAGTATGTGCACACAGGCC 60.322 55.000 24.37 11.10 45.48 5.19
3193 4432 1.522668 TTGAGTATGTGCACACAGGC 58.477 50.000 24.37 12.84 45.48 4.85
3194 4433 3.603532 AGATTGAGTATGTGCACACAGG 58.396 45.455 24.37 0.00 45.48 4.00
3195 4434 5.618056 AAAGATTGAGTATGTGCACACAG 57.382 39.130 24.37 0.00 45.48 3.66
3196 4435 8.785329 TTATAAAGATTGAGTATGTGCACACA 57.215 30.769 24.37 8.08 46.44 3.72
3197 4436 9.869844 GATTATAAAGATTGAGTATGTGCACAC 57.130 33.333 24.37 10.87 0.00 3.82
3198 4437 9.056005 GGATTATAAAGATTGAGTATGTGCACA 57.944 33.333 24.08 24.08 0.00 4.57
3199 4438 8.507249 GGGATTATAAAGATTGAGTATGTGCAC 58.493 37.037 10.75 10.75 0.00 4.57
3200 4439 8.217111 TGGGATTATAAAGATTGAGTATGTGCA 58.783 33.333 0.00 0.00 0.00 4.57
3201 4440 8.621532 TGGGATTATAAAGATTGAGTATGTGC 57.378 34.615 0.00 0.00 0.00 4.57
3202 4441 8.725148 GCTGGGATTATAAAGATTGAGTATGTG 58.275 37.037 0.00 0.00 0.00 3.21
3203 4442 8.439971 TGCTGGGATTATAAAGATTGAGTATGT 58.560 33.333 0.00 0.00 0.00 2.29
3204 4443 8.853077 TGCTGGGATTATAAAGATTGAGTATG 57.147 34.615 0.00 0.00 0.00 2.39
3205 4444 9.678260 GATGCTGGGATTATAAAGATTGAGTAT 57.322 33.333 0.00 0.00 0.00 2.12
3206 4445 8.659527 TGATGCTGGGATTATAAAGATTGAGTA 58.340 33.333 0.00 0.00 0.00 2.59
3207 4446 7.520798 TGATGCTGGGATTATAAAGATTGAGT 58.479 34.615 0.00 0.00 0.00 3.41
3208 4447 7.991084 TGATGCTGGGATTATAAAGATTGAG 57.009 36.000 0.00 0.00 0.00 3.02
3209 4448 7.040201 GCTTGATGCTGGGATTATAAAGATTGA 60.040 37.037 0.00 0.00 38.95 2.57
3210 4449 7.088905 GCTTGATGCTGGGATTATAAAGATTG 58.911 38.462 0.00 0.00 38.95 2.67
3211 4450 6.779049 TGCTTGATGCTGGGATTATAAAGATT 59.221 34.615 0.00 0.00 43.37 2.40
3212 4451 6.309357 TGCTTGATGCTGGGATTATAAAGAT 58.691 36.000 0.00 0.00 43.37 2.40
3213 4452 5.693961 TGCTTGATGCTGGGATTATAAAGA 58.306 37.500 0.00 0.00 43.37 2.52
3214 4453 6.433404 AGATGCTTGATGCTGGGATTATAAAG 59.567 38.462 0.00 0.00 43.37 1.85
3215 4454 6.309357 AGATGCTTGATGCTGGGATTATAAA 58.691 36.000 0.00 0.00 43.37 1.40
3216 4455 5.884322 AGATGCTTGATGCTGGGATTATAA 58.116 37.500 0.00 0.00 43.37 0.98
3217 4456 5.250082 AGAGATGCTTGATGCTGGGATTATA 59.750 40.000 0.00 0.00 43.37 0.98
3218 4457 4.043059 AGAGATGCTTGATGCTGGGATTAT 59.957 41.667 0.00 0.00 43.37 1.28
3219 4458 3.393609 AGAGATGCTTGATGCTGGGATTA 59.606 43.478 0.00 0.00 43.37 1.75
3220 4459 2.175069 AGAGATGCTTGATGCTGGGATT 59.825 45.455 0.00 0.00 43.37 3.01
3221 4460 1.775459 AGAGATGCTTGATGCTGGGAT 59.225 47.619 0.00 0.00 43.37 3.85
3222 4461 1.210538 AGAGATGCTTGATGCTGGGA 58.789 50.000 0.00 0.00 43.37 4.37
3223 4462 2.054232 AAGAGATGCTTGATGCTGGG 57.946 50.000 0.00 0.00 43.37 4.45
3224 4463 3.014623 TCAAAGAGATGCTTGATGCTGG 58.985 45.455 0.00 0.00 43.37 4.85
3225 4464 4.602006 CATCAAAGAGATGCTTGATGCTG 58.398 43.478 10.79 0.00 46.90 4.41
3226 4465 4.902443 CATCAAAGAGATGCTTGATGCT 57.098 40.909 10.79 0.00 46.90 3.79
3236 4475 8.905660 ATTGATCGATTCTTCATCAAAGAGAT 57.094 30.769 0.00 0.00 44.69 2.75
3237 4476 8.202811 AGATTGATCGATTCTTCATCAAAGAGA 58.797 33.333 0.00 0.00 44.69 3.10
3238 4477 8.367943 AGATTGATCGATTCTTCATCAAAGAG 57.632 34.615 0.00 0.00 44.69 2.85
3239 4478 8.202811 AGAGATTGATCGATTCTTCATCAAAGA 58.797 33.333 0.00 0.00 42.35 2.52
3240 4479 8.367943 AGAGATTGATCGATTCTTCATCAAAG 57.632 34.615 0.00 0.00 39.40 2.77
3241 4480 9.254133 GTAGAGATTGATCGATTCTTCATCAAA 57.746 33.333 0.00 0.00 39.40 2.69
3242 4481 8.416329 TGTAGAGATTGATCGATTCTTCATCAA 58.584 33.333 0.00 0.00 40.07 2.57
3243 4482 7.945134 TGTAGAGATTGATCGATTCTTCATCA 58.055 34.615 0.00 0.00 0.00 3.07
3244 4483 8.862074 CATGTAGAGATTGATCGATTCTTCATC 58.138 37.037 11.17 4.87 0.00 2.92
3245 4484 7.331440 GCATGTAGAGATTGATCGATTCTTCAT 59.669 37.037 0.00 4.96 0.00 2.57
3246 4485 6.644181 GCATGTAGAGATTGATCGATTCTTCA 59.356 38.462 0.00 2.61 0.00 3.02
3247 4486 6.867816 AGCATGTAGAGATTGATCGATTCTTC 59.132 38.462 0.00 0.00 0.00 2.87
3248 4487 6.757237 AGCATGTAGAGATTGATCGATTCTT 58.243 36.000 0.00 0.00 0.00 2.52
3249 4488 6.343716 AGCATGTAGAGATTGATCGATTCT 57.656 37.500 0.00 0.00 0.00 2.40
3250 4489 7.812191 ACTAAGCATGTAGAGATTGATCGATTC 59.188 37.037 0.00 0.00 0.00 2.52
3251 4490 7.665690 ACTAAGCATGTAGAGATTGATCGATT 58.334 34.615 0.00 0.00 0.00 3.34
3252 4491 7.225784 ACTAAGCATGTAGAGATTGATCGAT 57.774 36.000 0.00 0.00 0.00 3.59
3253 4492 6.641169 ACTAAGCATGTAGAGATTGATCGA 57.359 37.500 0.00 0.00 0.00 3.59
3254 4493 7.114670 CAGAACTAAGCATGTAGAGATTGATCG 59.885 40.741 0.00 0.00 0.00 3.69
3255 4494 7.925483 ACAGAACTAAGCATGTAGAGATTGATC 59.075 37.037 0.00 0.00 0.00 2.92
3256 4495 7.790027 ACAGAACTAAGCATGTAGAGATTGAT 58.210 34.615 0.00 0.00 0.00 2.57
3257 4496 7.093771 TGACAGAACTAAGCATGTAGAGATTGA 60.094 37.037 0.00 0.00 0.00 2.57
3258 4497 7.038048 TGACAGAACTAAGCATGTAGAGATTG 58.962 38.462 0.00 0.00 0.00 2.67
3259 4498 7.175347 TGACAGAACTAAGCATGTAGAGATT 57.825 36.000 0.00 0.00 0.00 2.40
3260 4499 6.782082 TGACAGAACTAAGCATGTAGAGAT 57.218 37.500 0.00 0.00 0.00 2.75
3261 4500 6.153510 ACATGACAGAACTAAGCATGTAGAGA 59.846 38.462 0.00 0.00 45.33 3.10
3262 4501 6.336566 ACATGACAGAACTAAGCATGTAGAG 58.663 40.000 0.00 0.00 45.33 2.43
3263 4502 6.286240 ACATGACAGAACTAAGCATGTAGA 57.714 37.500 0.00 0.00 45.33 2.59
3264 4503 6.674037 GCAACATGACAGAACTAAGCATGTAG 60.674 42.308 0.00 0.00 46.14 2.74
3265 4504 5.122239 GCAACATGACAGAACTAAGCATGTA 59.878 40.000 0.00 0.00 46.14 2.29
3267 4506 4.083164 TGCAACATGACAGAACTAAGCATG 60.083 41.667 0.00 0.00 41.44 4.06
3268 4507 4.074259 TGCAACATGACAGAACTAAGCAT 58.926 39.130 0.00 0.00 0.00 3.79
3269 4508 3.250762 GTGCAACATGACAGAACTAAGCA 59.749 43.478 0.00 0.00 36.32 3.91
3270 4509 3.499918 AGTGCAACATGACAGAACTAAGC 59.500 43.478 0.00 0.00 41.43 3.09
3271 4510 4.083643 CCAGTGCAACATGACAGAACTAAG 60.084 45.833 0.00 0.00 41.43 2.18
3272 4511 3.814842 CCAGTGCAACATGACAGAACTAA 59.185 43.478 0.00 0.00 41.43 2.24
3273 4512 3.402110 CCAGTGCAACATGACAGAACTA 58.598 45.455 0.00 0.00 41.43 2.24
3274 4513 2.224606 CCAGTGCAACATGACAGAACT 58.775 47.619 0.00 0.00 41.43 3.01
3275 4514 1.267806 CCCAGTGCAACATGACAGAAC 59.732 52.381 0.00 0.00 41.43 3.01
3276 4515 1.133823 ACCCAGTGCAACATGACAGAA 60.134 47.619 0.00 0.00 41.43 3.02
3277 4516 0.473755 ACCCAGTGCAACATGACAGA 59.526 50.000 0.00 0.00 41.43 3.41
3278 4517 1.001048 CAACCCAGTGCAACATGACAG 60.001 52.381 0.00 0.00 41.43 3.51
3279 4518 1.031235 CAACCCAGTGCAACATGACA 58.969 50.000 0.00 0.00 41.43 3.58
3280 4519 1.032014 ACAACCCAGTGCAACATGAC 58.968 50.000 0.00 0.00 41.43 3.06
3281 4520 1.774110 AACAACCCAGTGCAACATGA 58.226 45.000 0.00 0.00 41.43 3.07
3282 4521 2.607771 GCTAACAACCCAGTGCAACATG 60.608 50.000 0.00 0.00 41.43 3.21
3283 4522 1.613437 GCTAACAACCCAGTGCAACAT 59.387 47.619 0.00 0.00 41.43 2.71
3284 4523 1.028905 GCTAACAACCCAGTGCAACA 58.971 50.000 0.00 0.00 41.43 3.33
3285 4524 1.318576 AGCTAACAACCCAGTGCAAC 58.681 50.000 0.00 0.00 0.00 4.17
3286 4525 2.940994 TAGCTAACAACCCAGTGCAA 57.059 45.000 0.00 0.00 0.00 4.08
3287 4526 2.710377 CATAGCTAACAACCCAGTGCA 58.290 47.619 0.00 0.00 0.00 4.57
3288 4527 1.401905 GCATAGCTAACAACCCAGTGC 59.598 52.381 0.00 0.00 0.00 4.40
3289 4528 2.710377 TGCATAGCTAACAACCCAGTG 58.290 47.619 0.00 0.00 0.00 3.66
3290 4529 3.652057 ATGCATAGCTAACAACCCAGT 57.348 42.857 0.00 0.00 0.00 4.00
3291 4530 6.974932 CTATATGCATAGCTAACAACCCAG 57.025 41.667 12.79 0.00 0.00 4.45
3309 4548 8.524889 CTGGTGTGACAACAGGTCTGCTATAT 62.525 46.154 22.46 0.00 44.58 0.86
3310 4549 7.301623 CTGGTGTGACAACAGGTCTGCTATA 62.302 48.000 22.46 0.00 44.58 1.31
3311 4550 6.605146 CTGGTGTGACAACAGGTCTGCTAT 62.605 50.000 22.46 0.00 44.58 2.97
3312 4551 5.367049 CTGGTGTGACAACAGGTCTGCTA 62.367 52.174 22.46 0.00 44.58 3.49
3313 4552 4.698898 CTGGTGTGACAACAGGTCTGCT 62.699 54.545 22.46 0.00 44.58 4.24
3314 4553 2.409406 CTGGTGTGACAACAGGTCTGC 61.409 57.143 22.46 0.00 44.58 4.26
3315 4554 1.586422 CTGGTGTGACAACAGGTCTG 58.414 55.000 22.46 0.00 44.58 3.51
3325 4564 2.037772 ACCTCTGAATGTCTGGTGTGAC 59.962 50.000 0.00 0.00 37.47 3.67
3326 4565 2.300152 GACCTCTGAATGTCTGGTGTGA 59.700 50.000 0.00 0.00 0.00 3.58
3327 4566 2.613977 GGACCTCTGAATGTCTGGTGTG 60.614 54.545 6.87 0.00 0.00 3.82
3328 4567 1.625818 GGACCTCTGAATGTCTGGTGT 59.374 52.381 6.87 0.00 0.00 4.16
3329 4568 1.905215 AGGACCTCTGAATGTCTGGTG 59.095 52.381 0.00 0.00 0.00 4.17
3330 4569 2.334006 AGGACCTCTGAATGTCTGGT 57.666 50.000 0.00 0.00 0.00 4.00
3331 4570 2.836981 AGAAGGACCTCTGAATGTCTGG 59.163 50.000 0.00 0.00 0.00 3.86
3332 4571 3.768757 AGAGAAGGACCTCTGAATGTCTG 59.231 47.826 0.00 0.00 41.63 3.51
3333 4572 4.059773 AGAGAAGGACCTCTGAATGTCT 57.940 45.455 0.00 0.00 41.63 3.41
3334 4573 4.817318 AAGAGAAGGACCTCTGAATGTC 57.183 45.455 0.00 0.00 42.31 3.06
3335 4574 4.161377 GCTAAGAGAAGGACCTCTGAATGT 59.839 45.833 0.00 0.00 42.31 2.71
3336 4575 4.161189 TGCTAAGAGAAGGACCTCTGAATG 59.839 45.833 0.00 0.00 42.31 2.67
3337 4576 4.357325 TGCTAAGAGAAGGACCTCTGAAT 58.643 43.478 0.00 0.00 42.31 2.57
3338 4577 3.779444 TGCTAAGAGAAGGACCTCTGAA 58.221 45.455 0.00 0.00 42.31 3.02
3339 4578 3.458044 TGCTAAGAGAAGGACCTCTGA 57.542 47.619 0.00 0.00 42.31 3.27
3340 4579 4.751767 ATTGCTAAGAGAAGGACCTCTG 57.248 45.455 0.00 0.00 42.31 3.35
3341 4580 5.249393 TGAAATTGCTAAGAGAAGGACCTCT 59.751 40.000 0.00 0.00 44.84 3.69
3342 4581 5.491982 TGAAATTGCTAAGAGAAGGACCTC 58.508 41.667 0.00 0.00 0.00 3.85
3343 4582 5.505181 TGAAATTGCTAAGAGAAGGACCT 57.495 39.130 0.00 0.00 0.00 3.85
3344 4583 6.765915 ATTGAAATTGCTAAGAGAAGGACC 57.234 37.500 0.00 0.00 0.00 4.46
3345 4584 7.752686 GTGAATTGAAATTGCTAAGAGAAGGAC 59.247 37.037 0.00 0.00 0.00 3.85
3346 4585 7.667219 AGTGAATTGAAATTGCTAAGAGAAGGA 59.333 33.333 0.00 0.00 0.00 3.36
3347 4586 7.824672 AGTGAATTGAAATTGCTAAGAGAAGG 58.175 34.615 0.00 0.00 0.00 3.46
3350 4589 9.725019 TCTAAGTGAATTGAAATTGCTAAGAGA 57.275 29.630 0.00 0.00 0.00 3.10
3353 4592 9.565213 CCTTCTAAGTGAATTGAAATTGCTAAG 57.435 33.333 0.00 0.00 33.71 2.18
3354 4593 9.077885 ACCTTCTAAGTGAATTGAAATTGCTAA 57.922 29.630 0.00 0.00 33.71 3.09
3355 4594 8.635765 ACCTTCTAAGTGAATTGAAATTGCTA 57.364 30.769 0.00 0.00 33.71 3.49
3356 4595 7.530426 ACCTTCTAAGTGAATTGAAATTGCT 57.470 32.000 0.00 0.00 33.71 3.91
3357 4596 8.593492 AAACCTTCTAAGTGAATTGAAATTGC 57.407 30.769 0.00 0.00 33.71 3.56
3358 4597 9.971922 AGAAACCTTCTAAGTGAATTGAAATTG 57.028 29.630 0.00 0.00 38.49 2.32
3360 4599 9.354673 TGAGAAACCTTCTAAGTGAATTGAAAT 57.645 29.630 0.00 0.00 40.87 2.17
3361 4600 8.621286 GTGAGAAACCTTCTAAGTGAATTGAAA 58.379 33.333 0.00 0.00 40.87 2.69
3362 4601 7.228706 GGTGAGAAACCTTCTAAGTGAATTGAA 59.771 37.037 0.00 0.00 46.55 2.69
3363 4602 6.710744 GGTGAGAAACCTTCTAAGTGAATTGA 59.289 38.462 0.00 0.00 46.55 2.57
3364 4603 6.903419 GGTGAGAAACCTTCTAAGTGAATTG 58.097 40.000 0.00 0.00 46.55 2.32
3379 4618 3.476552 TGAGATGTTGTGGGTGAGAAAC 58.523 45.455 0.00 0.00 0.00 2.78
3380 4619 3.855255 TGAGATGTTGTGGGTGAGAAA 57.145 42.857 0.00 0.00 0.00 2.52
3381 4620 4.371624 AATGAGATGTTGTGGGTGAGAA 57.628 40.909 0.00 0.00 0.00 2.87
3382 4621 4.371624 AAATGAGATGTTGTGGGTGAGA 57.628 40.909 0.00 0.00 0.00 3.27
3383 4622 5.106157 GGTTAAATGAGATGTTGTGGGTGAG 60.106 44.000 0.00 0.00 0.00 3.51
3384 4623 4.764823 GGTTAAATGAGATGTTGTGGGTGA 59.235 41.667 0.00 0.00 0.00 4.02
3385 4624 4.082245 GGGTTAAATGAGATGTTGTGGGTG 60.082 45.833 0.00 0.00 0.00 4.61
3386 4625 4.086457 GGGTTAAATGAGATGTTGTGGGT 58.914 43.478 0.00 0.00 0.00 4.51
3387 4626 4.718940 GGGTTAAATGAGATGTTGTGGG 57.281 45.455 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.